| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | ACB143 | 4,741,649 | A→T | 5.6% | intergenic (+71/+1) | CJ019_04477 → / ← mqsA | Electron transfer flavoprotein‑ubiquinoneoxidoreductase/Antitoxin MqsA |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | ACB143 | 4,741,649 | 0 | A | T | 5.6% | 732.5 / 2.3 | 255 | intergenic (+71/+1) | CJ019_04477/mqsA | Electron transfer flavoprotein‑ubiquinoneoxidoreductase/Antitoxin MqsA |
| Reads supporting (aligned to +/- strand): ref base A (116/122); new base T (15/2); total (131/124) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.80e-03 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 258 total aligned reads displayed.
CGGCCCAGAACATCACCTGGGTCACCCCTGAAGGCGCTGGCGGGCCGAACTATCCGAACATGTAAGGCCCCTGCCCTTGCGGCAACAAAAAGCCCCCGGTTCTCATGAGCCGGGGGCTTTTTGTTGGCTGCCATTATCAGGCAGTACGCACTTCCTCAAAGAGTTCTGGATGGCGATCCAGCAGCTTGAGCAGTTTCACCAACGCCACTGGCGGGGTGGTCTTGCCGTTTTCATAACGGGAGAACGCATTGACCCCACCACCGAAGATTT > ACB143/4741514‑4741783 | cGGCCCAGAACATCACCTGGGTCACCCCTGAAGGCGCGGGCGGGCCGAACTATCCGAACATGTAAGGCCCCTGCCCTTGCGGCAACAAAAAGCCCCCGGTTCTCATGAGCCGGGGGCTTTTTGTTGGCTGCCATTa < 1:301989/136‑1 (MQ=255) gCCCCGAACATCACCGGGGACACCCCTGACGGGGGTGGCGGGCCGAACTATCCGAACATGTAAGGCCCCGGCCCTTGCGGCAACAAAAAGCCCCCGGTTCCAATGAGCCGGGGGCTTTTTTTTGGCTGCCATTATc < 8:245012/136‑1 (MQ=255) gCCCAGAACATCCCCTGGGTCACCCCTGAAGGCGCTGGCGGGCCGAACTATCCGAACATGTAAGGCCCCTGCCCTTGCGGCAACAAAAATCCCCCGGTTCTCATGAGCCGGGGGGTTTTTTTTGGCTGCCATTAt > 6:136044/1‑135 (MQ=255) gCCCAGAACATCACCTGGGTCACCCCTGAAGGCGCTGGCGGGCCGATCTATCCGAACATGTAAGGCCCCTGCCCTTGCGGCAACAAAAAGCCCCCGGTTCTCATGAGCCGGGGGCGTTTTGTTGGCTGAGATTAt > 2:31004/1‑135 (MQ=255) gCCCAGAACATCACCTGGGTCACCCCTGAAGGCGCTGGCGGGCCGAACTATCCGAACATGTACGGCCCCTGCCCTTGCGGCAACAAAAAGCCCCCGGTTCTCATGAGCCGGGGGCTTTTTGTTGGCTGCCATTATc < 4:1668/136‑1 (MQ=255) gCCCAGAACATCACCTGGGTCACCCCTGAAGGCGCTGGCGGGCCGAACTATCCGAACATGTAAGGCCCCTGCCCTTGCGGCAACAAAAAGCCCCCGGTTCTCATGAGCCGGGGGCTTTTTGTTGGCTGCCATTATc < 4:287095/136‑1 (MQ=255) gCCCAGAACATCACCTGGGTCACCCCTGAAGGCGCTGGCGGGCCGAACTATCCGAACATGTAAGGCCCCTGCCCTTGCGGCAACAAAAAGCCCCCGGTTCTCATGAGCCGGGGGCGTTTTGTTGGCTGCCATTAt > 1:13383/1‑135 (MQ=255) gCCCAGAACAGCTCCTGGGTCACCCCTGAAGGCGCTGGCGGTCCGAACTATCCCAACATTTAAGCCCCCAGCCCTTGCGGCAACAAAACGCCCCCGGTTCTCATGAGCCGGGGGCTTTTTGTTGGCTGCCATTATc < 1:371907/136‑1 (MQ=255) cccAGAACATCACCTGTGTCACCCCTGAAGGCGTTGGCGGGCCGAACTATCCGAACATGTAAGCCCCCGGCGCTTGCGGCAACAAAACGCCCCCGGATCTCATGAGCCGGGGGCTTTTTGTTGGCTGCCATTAt < 4:37708/134‑1 (MQ=255) cccAGAACATCACCTGGGTCACCCCTGAAGGCGCTGGCGGGCCGAACTATCCGAACATGTAAGGCCCCTGCCCTTGCGGCAACAAAAAGCCCCCGGTTCTCATGAGCCGGGGGCTTTTTGTTGGCTGCCATTAt > 6:342900/1‑134 (MQ=255) ccAGAACATCACCTGGGTCACCCCTGAAGGCGCTGGCGGGCCGAACTATCCGAACATGTAAGGCCCCTGCCCTTGCGGCAACAAAAAGCCCCCCGGTCTCATTAGCCGGGGGGTTTTTGTTGGCTGCCATTATCAg > 6:286170/1‑136 (MQ=255) cAGAACATCACCTGGGTCACCCCTGAAGGCGCTGGCGGGCCGAACTATCCGAACATGTAAGGCCCCTGCCCTTGCGGCAACAAAAACCCCCCGGTTCTCATGAGCCGGGGGCTTTTTTTTGGCTGGCATTTTCAgg > 2:145073/1‑136 (MQ=255) gAACATCACCTGGGTCACCCCTGAAGGCGCTGGCGGGCCGAACTATCCGAACATGTAAGGCCCCTGCCCTTGCGGCAACAAAAAGCCCCCGGTTCTCATGAGCCGGGGGCTTTTTGTTGGCTGCCATTATCAGGCa < 5:324755/136‑1 (MQ=255) acacCACCTGGGTCACCCGTGAAGGCGCTGGCGGGCCGAACTATCCGAACATGTACGCCCCCTGCCCTTGCGGCAACAAAACGCCCCCGGTTCTCATGAGCCGGGGGCTTTTTGTTGGCTGCCATTATCAGGCAGt < 1:188893/136‑1 (MQ=255) aCATCACCTGGGTCACCCCTGAAGGCGCTGGCGGGCCGAACTATCCGAACATGTAAGGCCCCTGCCCTTGCGGCAACAAAAAGCCCCCGGTTCTCATGAGCCGGGGGCTTTTTGTTGGCTGCCATTATCAGGCAGt < 7:51304/136‑1 (MQ=255) aTCACCTGGGTCACCCCTGAAGGCGCTGGCGGGCCGAACTATCCGAACATGTAAGGCCCCTGCCCTTGCGGCAACAAAAAGCCCCCGGTTCTCATGAGCCGGGGGCTTTTTGTTGGCTGCCATTATCAGGCAGTAc < 1:360683/136‑1 (MQ=255) aTCACCTGGGTCACCCCTGAAGGCGCTGGCGGGCCGAACTATCCGAACATGTAAGGCCCCTGCCCTTGCGGCAACAAAAAGCCCCCGGTTCTCATGAGCCGGGGGCTTTTTGTTGGCTGCCATTATCAGGCAGTAc < 3:88742/136‑1 (MQ=255) aTCACCTGGGTCACCCATGAAGGCGCTGGCGGGCCGAATTATCCGAACATGTATGTCCGCTGCCCTTGCGGCAACAAAAAGCCCACGGTTCTCATGAGCCGGGGGCTTTTTGTTGGCTGCCATTATCAGGCAGTAc < 8:362923/136‑1 (MQ=255) tCACCTGGGTCACCCCTGAAGGCGCTGGCGGGCCGAACTATCCGAACATGTAAGGCCCCTGCCCTTGCGGCAACAAAAAGCCCCCGGTTCTCATGAGCCGGGGGCTTTTTGTTGGCTGCCATTATCAGGCAGTACg < 2:241425/136‑1 (MQ=255) tCACCTGGGTCACCCCTGAAGGCGCTGGCGGGCCGAACTATCCGAACATGTAAGGCCCCTGCCCTTGCGGCAACAAAAAGCCCCCGGTTCTCATGAGCCGGGGGCTTTTTGTTGGCTGCCATTATCAGGCAGTACg < 4:108190/136‑1 (MQ=255) cACCTGGGTCACCCGTGAAGGCGCTGGCGGGCCGAACTATCCGAACATGTATGGCCCCTGCCCTTGCGGCAACAAAAAGCCCCCGGTTCTCATGAGCCGGGGGCTTTTTGTTGGCTGCCATTATCAGGCAGTACg < 6:210983/135‑1 (MQ=255) cTGGGTCACCCCTGAAGGCGCTGGCGGGCCGAACTATCCGAACATGTAAGGCCCCTGCCCTTGCGGCAACAAAAAGCCCCCGGTTCTCATGAGCCGGGGGCTTTTTGTTGGCTGCCATTATCAGGCAGTACGCACt > 1:211379/1‑136 (MQ=255) cTGGGTCACCCCTGAAGGCGCTGGCGGGCCGAACTATCCGAACATGTAAGGCCCCTGCCCTTGCGGCAACAAAAAGCCCCCGGGTCTCATGAGCCGGGGGCGTTTTTTTGGCTGCCATTATCAGGCAGTACGCACt > 7:49946/1‑136 (MQ=255) cTGGGTCACCCCTGAAGGCGCTGGCGGGCCGAACTATCCGAACATGTAAGGCCCCTGCCCTTGCGGCAACAAAAAGCCCCCCGTTCTCATGAGCCGGGGGCTTTTTTTTGGCTGGCATTATCAGGCAGTACGCCCt > 4:189433/1‑136 (MQ=255) cTGGGTCACCCCTGAAGGCGCTGGCGGGCCGAACTATCAGAACATGTAAGGCCCCTGCCCTTGCGGCAACAAAAATCCCCCCGGTGTCATGAGACGGGGGCGTTTTTTTTGGTGGCATTTTCAGGCAGGACGCAca > 3:137700/1‑135 (MQ=255) ggTCACCCCTGAAGGCGCTGGCGGGCCGAACTATCCGAACATGTAAGGCCCCTGCCCTTGCGGCAACAAAAAGCCCCCGGTTCTCATGAGCCGGGGGCTTTTTGTTGGCTGCCATTATCAGGCAGTACGCACTTcc < 4:264058/136‑1 (MQ=255) tCACCCCTGAAGGCGCTGGCGGGCCGAACTATCCGAACATGTAAGGCCCCTGCCCTTGCGGCAACAAAAAGCCCCCGGTTCTCATGAGCCGGGGGCTTTTTGTTGGCTGCCATTATCAGGCAGTACGCACTTCCt > 1:290258/1‑135 (MQ=255) tCACCCCTGAAGGCGCTGGCGGGCCGAACTATCCGAACATGTAAGGCCCCTGCCCTTGCGGCAACAAAAAGCCCCCGGTTCTCATGAGCCGGGGGCTTTTTGTTGGCTGCCATTATCAGGCAGTACGCACTTCCTc < 2:285608/136‑1 (MQ=255) tCACCCCTGAAGGCGCTGGCGGGCCGAACTATCCGAACATGTAAGGCCCCTGCCCTTGCGGCAACAAAAAGCCCCCGGTTCTCATGAGCCGGGGGCTTTTTGTTGGCTGCCATTATCAGGCAGTACGCACTTCCTc < 6:168736/136‑1 (MQ=255) tCACCCCTGAAGGCGCTGGCGGGCCGAACTATCCGAACATGTAAGGCCCCTGCCCTTGCGGCAACAAAAAGCCCCCCGTTGTAATTATCCGGGGGCGGTTTGTTTGCGGCCATTTTCCGGCAGTACGCAcgtact > 4:401441/1‑130 (MQ=255) tCACCCCTGAAGGCGCTGGCGGGCCGAACTATCCGAACATGTAAGGCCCCTGCCCTTGCGGCAACAAAAAGACCCCGGTTGTCAAGAGCCGGGGGCTTTTTGTTGGCTGCCATTATCAGGGAGTAAGCACTTACt > 7:168289/1‑135 (MQ=255) tCACCCCTGAAGGCGCTGGCGGGCCGAAATATCCGAACATGTAAGGCCCCTGCCCTTGCGGCAACAAAAAGCCCCCGGTTCTCATGAGCCGGGGGCTTTTTGTTGGCTGCCATTATCAGGCAGTACGCACTTCCTc < 2:88118/136‑1 (MQ=255) cccgTGAAGGCGCTGGGGGGCGGAAATATCCTAAAATTTAAGGCCCATCCCCTTGCGGCTAAAAAACCCCCCGGGTTCTATTTAGCCGGGGGATTTTTGTTGGCTGCCATTATCAGGCAGTACGCACTTCCTCaaa < 2:360836/136‑1 (MQ=255) ccTGAAGGCGCTGGCGGGCCGAACTATCCGAACATGTAAGGCCCCTGCCCTTGCGGCAACAAAAAGCCCCCGGTTCTCATGAGCCGGGGGCTTTTTGTTGGCTTGCATTTTCAGGCAGTACGCAAATCCACaaa > 5:290867/1‑134 (MQ=255) ccTGAAGGCGCTGGCGGGCCGAACTATCCGAACATGTAAGGCCCCTGCCCTTGCGGCAACAAAAAGCCCCCGGTTCTCATGAGCCGGGGGCGTTTTTTTGGCTGCCATTATCAGGCAGTACGCCCTTCCTCAAag > 8:200433/1‑135 (MQ=255) cTGAAGGCGCTGGCGGGCCGAACTATCCGAACATGTAAGGCCCCTGCCCTTGCGGCAACAAAAAGCCCCCGGTTCTCATGAGCCGGGGGCTTTTTGTTGGCTGCCATTATCAGGCAGTACGCACTTCCTCAAagag > 4:98468/1‑136 (MQ=255) cTGAAGGCGCTGGCGGGCCGAACTATCCGAACATGTAAGGCCCCTGCCCTTGCGGCAACAAAAAGCCCCCGAGTCTCATGAGCCGGGGGCTTTTTGGTGGCTGGCAGTTTAAGGCAGTACGCACTTACGCAAacag > 8:149334/1‑136 (MQ=255) cTGAAGGCGCTGGCGGGCCGAACTATCCGAACATGTAAGGCCCCTGCCCTTGCGGCAACAAAAAACCCCCCGTTCTCATGAGCCGGGGGCGTTTTTTTTGCTGGCATTATCAGGCACTACGCACATACACAAagag > 8:334684/1‑136 (MQ=255) aaGGCGCTGGCGGGCCGAACTATCCGAACATGTAAGGCCCCTGCCCTTGCGGCAACAAAAAGCCCCCGGTTCTCATGAGCCGGGGGCTTTTTGTTGGCTGCCATTATCAGGCAGTACGCACTTCCTCAAAGAGtt < 1:349293/135‑1 (MQ=255) ggCGCTGGCGGGCCGAACTATCCGAACATGTAAGGCCCCTGCCCTTGCGGCAACAAAAAGCCCCCGGTTCTCATGAGCCGGGGGCTTTTTGTTGGCTGCCATTATCAGGCAGTACGCACTTCCTCAAAGAGTTCTg < 8:1066/136‑1 (MQ=255) cgcTGGCGGGCGGAACTATCCGAACATGTAAGGCCCCTGCCCTTGCGGAAACAAAAAGCCCCCGGTTCTCATGAGCCGGGGGCTTTTTGTTGGCTGCCATTATCAGGCAGTACGCACTTCCTCAAAGAGTTCTGGa < 5:66171/136‑1 (MQ=255) ggCGGGCCGAACTATCCGAACATGTAAGGCCCCTGCCCTTGCGGCAACAAAAAGCCCCCGGTTCTCATGAGCCGGGGGCTTTTTGTTGGCTGCCATTATCAGGCAGTACGCCCTTCCTCAAAGAGTTCTGGATGGc > 4:231305/1‑136 (MQ=255) ggCGGGCCGAACTATCCGAACATGTAAGGCCCCTGCCCTTGCGGCAACAAAAAGCCCCCGGTTCTCATGAGCCGGGGGCTTTTTGTTGGCTGCCATTATCAGGCAGTACGCACTTCCTCAAAGAGTTCTGGATGGc > 2:323645/1‑136 (MQ=255) ggCGGGCCGAACTATCCGAACATGTAAGGCCCCTGCCCTTGCGGCAACAAAAAGCCCCCGGTTCTCATGAGCCGGGGGCTTTTTGTTGGCTGCCATTATCAGGCAGTACGCACTTCCTCAAAGAGTTCTGGATGGc > 8:190641/1‑136 (MQ=255) ggCGGGCCGAACTATCCGAACATGTAAGGCCCCTGCCCTTGCGGCAACAAAAAGCCCCCGGTTCTCATGAGCCGGGGGCTTTTTGTTGGCTGCCATTATAAGGCAGTACGCCCTTCCTCAAAGAGTTATGGATGGc > 1:127772/1‑136 (MQ=255) ggCGGGCCGAACTATCCGAACATGTAAGGCCCCTGCCCTTGCGGCAACAAAAAGCCCCCGGTTCTCATGAGCCGGGGGCTATTTTTTGGCTGCCATTAACAGGCAGTACGCACTTCCTCAAAGAGTTCTGGATGGc > 8:117842/1‑136 (MQ=255) ggCGGGCCGAACTATCCGAACATGTAAGGCCCCTGCCCTTGCGGCAACAAAAAGCCCCCGGTTCTCATGAGCCGGGGGCGTTTTGTTGGCTGCCATTATCAGGCAGTACGCACTTCCTCAAAGAGTTCTGGATGGc > 5:177066/1‑136 (MQ=255) cGGGCCGAACTATCCGAACATGTAAGGCCCCTGCCCTTGCGGCAACAAAAAGCCCCCGGTTCTCATGAGCCGGGGGCTTTTTGTTGGCTGCCATTATCAGGCAGTACGCACTTCCTCAAAGAGTTCTGGATGGCgg > 7:194980/1‑135 (MQ=255) gggCAGAACTAACCGAACATGTACGGCCCCTGCCCTTGCGGCAACAAAACGCCCCCGGTTCTCATGAGCCGGGGGCTTTTTGTTGGCTGCCATTATCAGGCAGTACGCACTTCCTCAAAGAGTTCTGGATGGCGAt < 8:299095/136‑1 (MQ=255) gAACTATCCGAACATGTAAGGCCCCTGCCCTTGCGGCAACAAAAAGCCCCCGGTTCTCATGAGCCGGGGGCTTTTTGTTGGCTGCCATTATCAGGCAGTACGCACTTCCTCAAAGAGTTCTGGATGGCGATCcagc < 3:264041/136‑1 (MQ=255) gAACATGTAAGGCCCCTGCCCTTGCGGCAACAAAAAGCCCCCGGTTCTCATGAGCCGGGGGCTTTTTGTTGGCTGCCATTATCAGGCAGTACGCACTTCCTCAAAGAGTTCTGGATGGCGATCCAGCAGCTTGAGc < 3:29851/136‑1 (MQ=255) aaCATGTAAGGCCCCTGCCCTTGCGGCAACAAAAAGCCCCCGGTTCTCATGAGCCGGGGGCTTTTTGTTGGCTGCCATTATCAGGCAGTAAGCACTTCCTCAAAGAGTTCTGGATGGCGATCCAGCAGCTTGAg > 1:32001/1‑134 (MQ=255) tGTAAGGCCCCTGCCCTTGCGGCAACAAAAAGCCCCCGGTTCTCATGAGCCGGGGGCTTTTTGTTGGCTGCCATTATCAGGCAGTACGCACTTCCTCAAAGAGTTCTGGATGGCGATCCAGCAGCTTGAGCAGtt > 3:352917/1‑135 (MQ=255) aaGGCCCCTGCCCTTGCGGCAACAAAAAGCCCCCGGTTCTCATGAGCCGGGGGCTTTTTGTTGGCTGCCATTATCAGGCAGTACGCACTTCCTCAAAGAGTTCTGGATGGCGATCCAGCAGCTTGAGCAGTTTCAc > 3:257391/1‑136 (MQ=255) aaGGCCCCTGCCCTTGCGGCAACAAAAAGCCCCCGGTTCTCATGAGCCGGGGGCTTTTTGTTGGCTGCCATTATCAGGCAGTACGCACTTCCTCAAAGAGTTCTGGATGGCGATCCAGCAGCTTGAGCAGTTTCAc > 8:13331/1‑136 (MQ=255) aGGCCCCTGCCCTTGCGGCAACAAAAAGCCCCCGGTTCTCATGAGCCGGGGGCTTTTTGTTGGCTGCCATTATCAGGCAGTACGCACTTCCTCAAAGAGTTCTGGATGGCGATCCAGCAGCTTGAGCAGTTTCAc < 5:162233/135‑1 (MQ=255) aGGCCCCTGCCCTTGCGGCAACAAAAAGCCCCCGGTTCTCATGAGCCGGGGGCTTTTTGTTGGCTGCCATTATCAGGCAGTACGCACTTCCTCAAAGAGTTCTGGATGGCGATCCAGCAGCTTGAGCAGTTTCAc < 1:236462/135‑1 (MQ=255) aGGCCCCTGCCCTTGCGGCAACAAAAAGCCCCCGGTTCTCATGAGCCGGGGGCTTTTTGTTGGCTGCCATTATAAGGCAGTACGCACTTCCTCAAAGAGTTCTGGATGGCGATCCAGCAGCTTGAGCAGTTTCAc > 7:275297/1‑135 (MQ=255) ggCCCCTGCCCTTGCGGCAACAAAAAGCCCCCGGTTCTCATGAGCCGGGGGCTTTTTGTTGGCTGCCATTATCAGGCAGTACGCACTTCCTc < 3:290073/92‑1 (MQ=255) ggCCCCTGCCCTTGCGGCAACAAAAAGCCCCCGGTTCTCATGAGCCGGGGGCTTTTTGTTGGCTGCCATTATCAGGCAGTACGCACTTCCTCAAAGAGTTCTGGATGGCGATCCAGCAGCTTGAGCAGTTTCAcc > 7:166255/1‑135 (MQ=255) ggCCCCTGCCCTTGCGGCAACAAAAAGCCCCCGGTTCTCATGAGCCGGGGGCGTTTTGTTGGCTGCCATTATCAGGCAGTACGCCCTTCCTCAAAGAGTTCTGGATGGCGATCCAGCAGCTTGAGCAGGTTCAcc > 2:106797/1‑135 (MQ=255) ggCCCCTGCCCTTGCGGCAACAAAAAGCCCCCGGTTATCATGAGCCGGGGGCTTTTTGTTGGCTGCCATTATCAGGCAGTACGCACTTCCTCAAAGAGTTCTGGATGGCGATCCAGCAGCTTGAGCAGTTTCAcc > 7:125970/1‑135 (MQ=255) ccctgccctgGGGGCAACAAAACGCCCCCGGTCCTCATGAGCCGGGGGCTTTTTGTTGGCTGCCATTATCAGGCAGTACGCACTTCCTCAAAGAGTTCTGGATGGCGATCCAGCAGCTTGAGCAGTTTCACCAACg < 1:156422/136‑1 (MQ=255) ccTGCCCTTGCGGCAACAAAAAGCCCCCGGTTCTCATGAGCCGGGGGCTTTTTGTTGGCTGCCATTATAAGGCAGTACGCACTTCCTCAAAGAGTTCTGGATGGAGATCCAGCAGCTTGAGCAGTTTCACCAACGc > 6:306922/1‑136 (MQ=255) gCCCTTGCGGCAACAAAAAGCCCCCGGTTCTCATGAGCCGGGGGCTTTTTGTTGGCTGCCATTATCAGGCAGTACGCCCTTCCTCAAAGAGTTCTGGATGGCGCTCCAGCAGCTTGAGCAGTTTCCCCAACGccc > 1:314054/1‑134 (MQ=255) gCCCTTGCGGCAACAAAAAGCCCCCGGTTCTCATGAGCCGGGGGCTTTTTGTTGGCTGCCATTATAAGGCAGTACGCACTTCCACAAATAGTTAGGGATTGCGCTCCACCAGCGTGAGCCTTTTAACCAACCCCa > 6:113950/1‑135 (MQ=255) cccTTGCGGCAACAAAACGCCCCCGGTTCTCATGAGCCTGGGGCTTTTTGTTGGCTGCCATTATCAGGCAGTACGCACTTCCTCAAAGAGTTCTGGATGGCGATCCAGCAGCTTGAGCAGTTTCACCAACGCCa < 1:80049/134‑1 (MQ=255) cccTTGCGGCAACAAAAAGCCCCCGGTTCTGATGAGCCGGGGGCTTTTTTTTTGCTGGCATTTTAAGGCAGTACGGACTTCCTCAAAGAGTTCTGGCTGGCGTTCCACCAGCATGAGCCGTTTCACCAACGCCACt > 4:318218/1‑136 (MQ=255) cccTTGCGGCAACAAAAAGCCCCCGGTTCTCATGAGCCGGGGGCTTTTTGTTGGCTGCCATTATCAGGCAGTACGCACTTCCTCAAAGAGTTCTGGATGGCGATCCAGCAGCTTGAGCAGTTTCACCAACGCCACt > 5:359172/1‑136 (MQ=255) cccTTGCGGCAACAAAAAGCCCCCGGTTCTCATGAGCCGGGGGCTTTTTGTTGGCTGCCATTATCAGGCAGTACGCACTTCCTCAAAGAGTTCTGGATGGCGATCCAGCAGCTTGAGCAGTTTCACCAACGCCACt > 5:379770/1‑136 (MQ=255) cccTTGCGGCAACAAAAAGCCCCCGGTTCTCATGAGCCGGGGGCGTTTTGTTGGCTGGCATTTTCAGGCAGTACGCACGTCCTCAAAGAGTTCTGGATGGCGATCCAGCAGCTTGAGCCGTTTCACCAACGCCa > 4:197953/1‑134 (MQ=255) cccTTGCGGCAACAAAAAGCCCCCCGGTCTAAAGAGCCGGGGGCGTTTTGTTTGCTGCCAATATCAGGCCGTACGCACTTCCAGAAAGAGTTCTTGATGGCGAACCAGCCGCATGAGCACTTTACACAACGCCACt > 8:80144/1‑136 (MQ=255) gCGGCAACAAAAAGCCCCCGGTTCTCATGAGCCGGGGGCTTTTTGTTGGCTGCCATTATCAGGCAGTACGCACTTCCTCAAAGAGTTCTGGATGGCGATCCAGCAGCTTGAGCAGTTTCACCAACGCCACTGGCg < 7:307977/135‑1 (MQ=255) gCGGCAACAAAAACCCCCCGGTTCTCCTGAGCCGGGGGCTTTTTGTTGGCGGCCATTATCAGGCAGTACGCACTTCCTCAAAGAGTTCTGGATGGCGATCCAGCAGCTTGAGCAGTTTCACCAACGCCACTGGCg < 4:348343/135‑1 (MQ=255) ggCAACAAAAAGCCCCCGGTTCTCATGAGCCGGGGGCTTTTTGTTGGCTGCCATTATCAGGCAGTACGCACTTCCGCAAAGAGTTCTGGATGGCGATGCAGCAGCTTGAGCAGTTTCACCAACGCCACTGGCgggg > 5:264036/1‑136 (MQ=255) caacaaAAAGCCCCCGGTTCTCATGAGCCGGGGGCGTTTTGTTGGGTGCCATTATCAGGCAGTTCGGACTTCCGGAAAGAGTTGTGGTTGGCGCTCCAGGAGCTTGAGCTGTTTGACCAACCCCACTGGCgggggg > 6:381195/1‑134 (MQ=255) caacaaAAAGCCCCCGGTTCTCATGAGCCGGGGG‑GTTTTGTTTGCTGCCATTATCAGGCAGTACGCCCTTCCGGAAAGAGTTGTGGCTGGCGCTCCAGCAGCGTGCGCAGTTTCACCAACGCCACTGGCGGggtgg > 2:25820/1‑136 (MQ=255) aaaaGCCCCCGGTTCTCATGAGCGGGGGGATTTTTGTTGGCTGCCATTATCAGGCAGTACGCACTTCCTCAAAGAGTTCTGGATGGCGATCCAGCAGCTTGAGCAGTTTCACCAACGCCACTGGCGGGGTGGTCtt < 2:194864/136‑1 (MQ=255) cccccGGTTCTCATGAGCCGGGGGCTTTTTGTTGGCTGCCATTATCAGGCAGTACGCACTTCCTCAAAGAGTTCTGGATGGCGATCCAGCAGCTTGAGCAGTTTCACCAACGCCACTGGCGGGGTGGTCTTGCCGt < 5:196621/136‑1 (MQ=255) ccGGTTCTCATGCGCCGGGGGCTTTTTGTTGGCTGCCATTATCAGGCAGTACGCACTTCCTCAAAGAGTTCTGGATGGCGATCCAGCAGCTTGAGCAGTTTCACCAACGCCACTGGCGGGGTGGTCTTGCCGtttt < 3:185579/136‑1 (MQ=255) ccGGTGCGCATGAGCGGGGGGCTTTTTGTTGGCTGCCATTATCAGGCAGTACGCACTTCCTCAAAGAGTTCTGGATGGCGATCCAGCAGCTTGAGCAGTTTCACCAACGCCACTGGCGGGGTGGTCTTGCCGtttt < 3:191716/136‑1 (MQ=255) ggTTCTCATGAGCCGGGGGCTTTTTGTTGGCTGCCAATATCAGGCAGTACGCACTTCCTCAAAGAGTTCTGGATGGCGATCCAGCAGCTTGAGCAGTTTCACCAACGCCACTGGCGGGGTGGTCTTGCCGTTTTCa < 2:345259/136‑1 (MQ=255) gTTCTCATGAGCCGGGGGCTTTTTGTTGGCTGCCATTATCAGGCAGTACGCACTTCCTCaaa > 6:164/1‑62 (MQ=255) ttCTCATGAGCCGGGGGCTTTTTGTTGGCTGCCATTATCAGGCAGTACGCACTTCCTCAAAGAGTTCTGGATGGCGATCCAGCAGCTTGAGCAGTTTCACCAACGCCACTGGCGGGGTGGTCTTGCCGTTTTCAt > 6:260454/1‑135 (MQ=255) ttCTCATGAGCCGGGGGCTTTTTCTTGGCTGCCAGTATCAGGCAGTACGCACTTCCTCAAAGAGTTCTGGATGGCGATCCAGCAGCTTGAGCAGTTTCACCAACGCCCCTGGCGGGGTGGTCTTGCCGTTTTCAtt > 3:346953/1‑135 (MQ=255) aTGTGCCGGGGGCTTTTTGTTGGCTGCCATTATCAGGCAGTACGCACTTCCTCAAAGAGTTCTGGATGGCGATCCAGCAGCTTGAGCAGTTTCACCAACGCCACTGGCGGGGTGGTCTTGCCGTTTTCATAACggg < 4:162168/136‑1 (MQ=255) aTGAGCCGGGGGCTTTTTGTTGGCTGCCATTATCAGGCAGTACGCACTTCCTCAAAGAGTTCTGGATGGCGATCCAGCAGCTTGAGCAGTTTCACCAACGCCACTGGCGGGGTGGTCTTGCCGTTTTCATAACggg < 6:361763/136‑1 (MQ=255) aTGAGCCGGGGGCTTTTTGTTGGCTGCCATTATCAGGCAGTACGCACTTCCTCAAAGAGTTCTGGATGGCGATCCAGCAGCTTGAGCAGTTTCACCAACGCCACTGGCGGGGTGGTCTTGCCGTTTTCATAACggg < 1:24840/136‑1 (MQ=255) aTGAGCCGGGGGCTTTTTGTTGGCTGCCATTATCAGGCAGTACGCACTTCCTCAAAGAGTTCTGGATGGCGATCCAGCAGCTTGAGCAGTTTCACCAACGCCACTGGCGGGGTGGTCTTGCCGTTTTCATAACgg < 4:129779/135‑1 (MQ=255) tGAGCCGGGGGCTTTTTGTTGGCTGCCATTATCAGGCAGTACGCACTTCCTCAAAGAGTTCTGGATGGCGATCCAGCAGCTTGAGCAGTTTCACCAACGCCACTGGCGGGGTGGTCTTGCCGTTTTCATAACGGga < 7:218910/136‑1 (MQ=255) gggggCTTTTTGTTGGCTGCCATTATCAGGCAGTACGCACTTCCTCAAAGAGTTCTGGATGGCGATCCAGCAGCTTGAGCAGTTTCACCAACGCCACTGGCGGGGTGGTCTTGCCGTTTTCATAACGGGAGAACGc < 4:25670/136‑1 (MQ=255) gggggCTTTTTGTTGGCTGCCATTATCAGGCAGTACGCACTTCCTCAAAGAGTTCTGGATGGCGATCCAGCAGCTTGAGCAGTTTCACCAACGCCACTGGCGGGGTGGTCTTGCCGTTTTCATAACGGGAGAACGc < 6:183401/136‑1 (MQ=255) ggggCTTTTTGTTGGCTGCCATTATCAGGCAGTACGCACTTCCTCAAAGAGTTCTGGATGGCGATCCAGCAGCTTGAGCAGTTTCACCAACGCCACTGGCGGGGTGGTCTTGCCGTTTTCATAACGGGAGAACGCa > 3:278391/1‑136 (MQ=255) gtttttGTTGGCTGCCTTTATCAGGCAGTACGCAATTCCTCAAAGAGTTCTGGATGGCGATCCAGCAGCTTGAGCAGTTTCACCAACGCCACTGGCGGGGTGGTCTTGCCGTTTTCATAACGGGAGAACGCATTGa < 3:222133/135‑1 (MQ=255) cTTTTTGTTGGCTGCCATTATCAGGCAGTACGCACTTCCTCAAAGAGTTCTGGATGGCGATCCAGCAGCTTGAGCAGTTTCACCAACGCCACTGGCGGGGTGGTCTTGCCGTTTTCATAACGGGAGAACGc < 8:265798/131‑1 (MQ=255) gttgGCTGCCATTATCAGGCAGTACGCACTTCCTCAAAGAGTTCTGGATGGCGATCCAGCAGCtt > 7:110992/1‑65 (MQ=255) gttgGCTGCCATTATCAGGCAGTACGCACTTCCTCAAAGAGTTCTGGATGGCGATCCAGCAGCTTGAGCAGTTTCACCAACGCCACTGGCGGGGTGGTCTTGCCGTTTTCATAACGGGAGAACGCATTGACCccac > 7:332320/1‑136 (MQ=255) ggCTGCCATTATCAGGCAGTACGCACTTCCTCAAAGAGTTCTGGATGGCGATCCAGCAGCTTGAGCAGTTTCACCAACGCCACTGGCGGGGTGGTCTTGCCGTTTTCATAACGGGAGAACGCATTGAACCcaccac > 4:84967/1‑136 (MQ=255) ggCTGCCATTATCAGGCAGTACGCACTTACTCAAAGAGTTCTGGATGGCGATCCAGCAGCTTGAGCAGTTTCACCAACGCCACTGGCGGGGTGGTCTTGCCGTTTTCATAACGGGAGAACGCATTGACCccacca < 7:379016/135‑1 (MQ=255) aTCAGGCAGTACGCACTTCCTCAAAGAGTTCTGGATGGCGATCCAGCAGCTTGAGCAGTTTCACCAACGCCACTGGCGGGGTGGTCTTGCCGTTTTCATAACGGGAGAACGCATTGACCCCACCACCGAAGAttt < 6:93246/135‑1 (MQ=255) | CGGCCCAGAACATCACCTGGGTCACCCCTGAAGGCGCTGGCGGGCCGAACTATCCGAACATGTAAGGCCCCTGCCCTTGCGGCAACAAAAAGCCCCCGGTTCTCATGAGCCGGGGGCTTTTTGTTGGCTGCCATTATCAGGCAGTACGCACTTCCTCAAAGAGTTCTGGATGGCGATCCAGCAGCTTGAGCAGTTTCACCAACGCCACTGGCGGGGTGGTCTTGCCGTTTTCATAACGGGAGAACGCATTGACCCCACCACCGAAGATTT > ACB143/4741514‑4741783 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |