| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | ACB143 | 916,696 | 0 | T | G | 31.4% | 95.9 / 11.5 | 70 | Q516P (CAG→CCG) | ltxB | Leukotoxin export ATP‑binding protein LtxB |
| Reads supporting (aligned to +/- strand): ref base T (9/39); new base G (21/1); total (30/40) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 6.73e-10 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
| Rejected as consensus: Frequency below/above cutoff threshold. | |||||||||||
GGTCGAGGTGGGCCATGGCGATGCCGTCCAGGCTGATCTCGCCCTGCACCAGATCCATGGCCCCACCCAGCGCCTGCAGCAAGGTTGATTTGCCGGCGCCGTTGCGGCCCAGCACGGCAATGCGCTCGCCCGGCTGGATATCCAG‑CCGGCCAATGTTCAGCACTGGCGGGTAGTCTTCGCTGTAGCGGAAGTTGGCCTGGCGCAGGCGGTACTCGCCGTGAATGGCCGGCAGGTGCACGCGGGCTTCGCCTTCGGGGTGATCGACC > ACB143/916562‑916827 | ggTCGAGGTGGGCCATGGCGATGCCGTCCAGGCTGATCTCGCCCTGCACCAGATCCATGGCCCCACCCAGCGCCTGCAGCAAGGTTGATTTGCCGGCGCCGTTGCGGCCCAGCACGGCAATGCGCTCGCCCGGCggg > 6:162902/1‑137 (MQ=255)ggTCGAGGTGGGCCATGGCGATGCCGTCCAGGCTGATCTCGCCCTGCACCAGATCCATGGCCCCACCCAGCGCCTGCAGCAAGGTTGATTTGCCGGCGCCGTTGCGGCCCAGCACGGCAATGCGCTCGCCCGGCTgg < 3:298348/137‑1 (MQ=255)ggTCGAGGTGGGCCATGGCGATGCCGTCCAGGCTGATCTCGCCCTGCACCAGATCCATGGCCCCACCCAGCGCCTGCAGCAAGGTTGATTTGCCGGCGCCGTTGCGGCCCAGCACGGCAATGCGCTCGCCCGGCTgg < 3:304213/137‑1 (MQ=255) cGAGGTGGGCCATGGCGATGCCGTCCAGGCTGATCTCGCCCTGCACCAGATCCATGGCCCCACCCAGCGCCTGCAGCAAGGTTGATTTGCCGGCGCCGTTGCGGACCAGCACGGCAATGCGCTCGCCCGGCGGGatt > 5:243567/1‑136 (MQ=255) cggTGGGCCAGGGCGATGCCGGCCAGGCTGCTCTCGCCCTGCACCCGATCCATGGCCCCACCCAGCGCCTGCAGCAAGGTTGATTTGCCGGCGCCTTTGCGGCCCAGCACGGCAATGCTCTCGCCCGGCTGGATATc < 6:339154/136‑1 (MQ=255) aGGTGGGCCATGGCGATGCCGTCCAGGCTGATCTCGCCCTGCACCAGATCCATTGCCCCACCCAGCGCCTGCAGCAAGGTTGATTTGCCGGCGCCGTTGCGGCCCAGCACGGCAATGCGCTCGCCCGGCTGGATATc < 4:429792/137‑1 (MQ=255) aGGTGGGCCATGGCGATGCCGTCCAGGCTGATCTCGCCCTGCACCAGATCCATGGCCCCACCCAGCGCCTGCAGCAAGGTTGATTTGCCGGCGCCGTTGCGGCCCAGCACGGCAATGCGCTCGCGCGGCGGGctatg > 5:488596/1‑136 (MQ=255) aGGTGGGCCATGGCGATGCCGTCCAGGCTGATCTCGCCCTGCACCAGATCCATGGCCCCACCCAGCGCCTGCAGCAAGGTTGATTTGCCGGCGCCGTTGCGGCCCAGCACGGCAATGCGCTCGCCCGGCTGGatata > 6:223829/1‑136 (MQ=255) aGGTGGGCCATGGCGATGCCGTCCAGGCTGATCTCGCCCTGCACCAGATCCATGGCCCCACCCAGCGCCTGCAGCAAGGTTGATTTGCCGGCGCCGTTGCGGCCCAGCACGGCAATGCGCTCGCCCGGCTGGATATc < 4:450011/137‑1 (MQ=255) aGGTGGGCCATGGCGATGCCGTCCAGGCTGATCTCGCCCTGCACCAGATCCATGGCCCCACCCAGCGCCTGCAGCAAGGTTGATTTGCCGGCGCCGTTGCGGCCCAGCACGGCAATGCGCTCGCCCGGCTGGATATc < 3:89981/137‑1 (MQ=255) aGGTGGGCCATGGCGATGCCGTCCAGGCTGATCTCGCCCTGCACCAGATCCATGGCCCCACCCAGCGACTGCAGCAAGGTTGATTTGCCGGCGCCGTTGCGGCCCAGCACGGCAATGCGCTCGCCCGGCGGGaaata > 7:79441/1‑136 (MQ=255) ggCCATGGCGATGCCGTCCAGGCTGATCTCGCCCTTCACCAGATCCATGGCCCCAGCCAGCGCCTGCAGCAAGGTTGATTTGCCGGCGCCGTTGCGGCCCAGCACGGCAATGCGCTCGCGCGGCTGGATATCCAG‑cc < 6:385254/137‑1 (MQ=255) ggCCATGGCGATGCCGTCCAGGCTGATCTCGCCCTGCACCAGATCCATGGCCCCACCCAGCGCCTGCAGCAAGGTTGATTTGCCGGCGCCGTTGCGGCCCAGCACGGCAATGCGCTCGCCCGGCTGGATATCCAG‑cc < 8:166771/137‑1 (MQ=255) ggCCATGGCGATGCCGTCCAGGCTGATCTCGCCCTGCACCAGATCCATGGCCCCACCCAGCGCCTGCAGCAAGGTTGATTTGCCGGCGCCGTTGCGGCCCAGCACGGCAATGCGCTCGCCCGGCTGGATATCCAG‑cc < 7:411343/137‑1 (MQ=255) gCCATGGCGATGCCGTCCAGGCTGATCTCGCCCTGCACCAGATCCATGGCCCCACCCAGCGCCTGCAGCAAGGTTGATTTGCCGGCGCCGTTGCGGCCCAGCACGGCAATGCGCTCGCCCGGCTGGATATCCAG‑CCg < 8:255067/137‑1 (MQ=255) cATGGCGATGCCGTCCAGGCTGATCTCGCCCTGCACCAGATCCATGGCCCCACCCAGCGCCTGCAGCAAGGTTGATTTGCCGGCGCCGTTGCGGCCCAGCACGGCAATGCGCTCGCCCGGCGGGATATACAC‑CCGGc > 4:280135/1‑137 (MQ=255) tGGCGATGCCGTCCAGGCTGATCTCGCCCTGCACCAGATCCATGGCCCCACCCAGCGCCTGCAGCAAGGTTGATTTGCCGGCGCCGTTGCGGCCCAGCACGGCAATGCGCTCGCCCGGCGGGCTTTGCAC‑CCGGCCa > 7:406624/1‑137 (MQ=255) gCGATGCCGTCCAGGCTGATCTCGCCCTGCACCAGATCCATGGCCCCACCCAGCGCCTGCAGCAAGGTTGATTTGCCGGCGCCGTTGCGGCCCAGCACGGCAATGCGCTCGCCCGGCTGGATATCCAG‑CCGGCCAAt < 2:302768/137‑1 (MQ=255) cGATGCCGTCCAGGCTGATCTCGCCCTGCACCAGATCCATGGCCCCACCCAGCGCCTGCAGCAAGGTTGATTTGCCGGCGCCGTTGCGGCCCAGCACGGCAATGCGCTCGCGCGGGGGGGTTTGCAG‑CCGGcccagg > 7:32228/1‑133 (MQ=255) cGATGCCATCCAGGCTGATCTCGCCCTGCACCAGATCCATGGCCCCACCCAGCGCCTGCAGCAAGGTTGATTTGCCGGCGCCGTTGCGGCCCAGCACGGCAATGCGCTCGCCCGGCTGGGTTTACAG‑CCGGCCAAtt > 7:300609/1‑136 (MQ=255) aTGCCGTCCAGGCTGATCTCGCCCTGCACCAGATCCATGGCCCCACCCAGCGCCTGCAGCAAGGTTGATTTGCCGGCGCCGTTGCGGCCCAGCACGGCAATGCGCTCGCCCGGCTGGATATCCAG‑CCGGCCAATGtt < 6:270433/137‑1 (MQ=255) gCCGTCCAGGCTGATCTCGCCCTGCACCAGATCCATGGCCCCACCCAGCGCCTGCAGCAAGGTTGATTTGCCGGCGCCGTTGCGGCCCAGCACGGCAATGCGCTCGCCCGGCTGGATATCCAG‑CCGGCCAATGTTCa < 2:202813/137‑1 (MQ=255) ccGTCCAGGCTGATCTCGCCCTGCACCAGATCCATGGCCCCACCCAGCGCCTGCAGCAAGGTTGATTTGCCGGCGCCGTTGCGGCCCAGCACGGCAATGCGCTCGCCCGGCGGGGGATACAG‑CCGGCCCATGTTCAg > 1:301766/1‑137 (MQ=255) gTCCAGGCTGATCTCGCCCTGCACCAGATCCATGGCCCCACCCAGCGCCTGCAGCAAGGTTGATTTGCCGGCGCCGTTGCGGCCCAGCCCGGCAATGCGCTCGCCCGGCGGGATATCCAG‑CCGGCCAATGTTCAGcc > 8:385809/1‑136 (MQ=255) aGGCTGATCTCGCCCTGCACCAGATCCATGGCCCCACCCAGCGCCTGCAGCAAGGTTGATTTGCCGGCGCCGTTGCGGCCCAGCACGGCAATGCGCTCGCCCGGCTGGATATCCAC‑CCGGCCAAAGTTCCGCACTgg > 2:263930/1‑137 (MQ=255) aGGCTGATCTCGCCCTGCACCAGATCCATGGCCCCACCCAGCGCCTGCAGCAAGGTTGATTTGCCGGCGCCGTTGCGGCCCAGCACGGCAATGCGCTCGCCCGGCGGGATATACAC‑CCCGCCCAAGTTAACCACAgg > 6:148928/1‑137 (MQ=255) ggCTGATCTCGCCCTGCACCAGATCCATGGCCCCACCCAGCGCCTGCAGCAAGGTTGATTTGCCGGCGCCGTTGCGGCCCAGCACGGCAATGCGCTCGCCCGGCTGGATATCCAG‑CCGGCCAATGTTCAGCACTGGc < 4:435578/137‑1 (MQ=255) gcggATCTCGCCCTGCACCAGATCCATGGCCCCACCCAGCGCCTGCAGCAAGGTTGATTTGCCGGCGCCGTTGCGGCCCAGCACGGCAATGCGCTCGCCCGGCTGGATATCCAG‑CCGGCCAATGTTCAGCACTGGCg < 4:392563/134‑1 (MQ=255) gCTGATCTCGCCCTGCACCATATCCATGGCCCCAGCCAGCTCCTGCAGCAAGGTGGATTTGCCGGCGCCGTTGCGGCCCTGCACGGCAATGCGCTCGCCCGGCTGGATATCCTG‑CCGGCCAATGTTCAGCACTGGCg < 2:221974/137‑1 (MQ=255) tcGCCCTGCACCAGATCCATTGCCCCACCCAGCGCCTGCAGCAAGGTTGATTTGCCGGCGCCGTTGCGGCCCAGCACGGCAATGCGCTCGCCCGGGGTGCTATACAC‑CCCGCCCAAGTTGAGCAAAGGCggggtgtg > 4:391768/1‑132 (MQ=255) tcGCCCTGCACCAGATCCATGGCCCCACCCAGCGCCTGCAGCAAGGTTGATTTGCCGGCGCCGTTGCGGCCCAGCACGGCAATGCGCTCGCCCGGCTGGGTATACAG‑CCGGCCAAAGTTGAGCACGGGCGGGTTGtg > 6:269422/1‑136 (MQ=255) cGCCCTGCACCAGATCCATGGCCCCACCCAGCGCCTGCAGCAAGGTTGATTTGCCGGCGCCGTTGCGGCCCAGCACGGCAATGCGCTCGCCCGGCGGGATATACAC‑CCCGCCAATGTTGAGCACTGGCGGGGAGTCt > 6:238281/1‑137 (MQ=255) gCCCTGCACCAGATCCATGGCCCCACCCAGCGCGTGGAGCAAGTTTGATTTGCGGGCGCCGTTGCGGCCCAGCACGGCAATGCGCTCGCCCGGCTGGATATCGAG‑CCGGCCAATGTTCAGCACTGGCGGGTAGTCtt < 3:355195/137‑1 (MQ=255) cccTGCACCAGATCCATGGCCCCACCCAGCGCCTGCAGCAAGGTTGATTTGCCGGCGCCGTTGCGGCCCAGCACGGCAATGCGCTCGCCCGGCTGGATATCCAG‑CCGGCCAATGTTCAGCACTGGCGGGTAGTCTTc < 3:215996/137‑1 (MQ=255) cccTGCACCAGATCCATGGCCCCACCCAGCGCCTGCAGCAAGGTTGATTTGCCGGCGCCGTTGCGGCCCAGCACGGCAATGCGCTCGCCCGGCTGGATATCCAG‑CCGGCCAATGTTCAGCACTGGCGGGTAGTCTTc < 5:104748/137‑1 (MQ=255) tGCACCAGATCCATGGCCCCACCCAGCGCCTGCAGCAAGGTTGATTTGCCGGCGCCGTTGCGGCCCAGCACGGCAATGCGCTCGCCCCGCGGGGTATCCAG‑CCCGCCAAAGTTGAGCACGGGCGGGGTGTCTTAGCt > 7:23092/1‑137 (MQ=255) tcACCAGATCCATGGCCCCACCCAGCGCCTGCAGCAAGGTTGATTTGCCGGCGCCGTTGCGGCCCAGCACGGCAATGCGCTCGCCCGGCTGGATATCCAG‑CCGGCCAATGTTCAGCACTGGCGGGTAGTCTTCGCTg < 3:104615/136‑1 (MQ=255) ccAGATCCATGGCCCCACCCAGCGCCTGCAGCAAGGTTGATTTGCCGGCGCCGTTGCGGCCCAGCACGGCAATGCGCTCGCCCGGCGGGGTATCCAC‑CCCGCCAAAGGTGAGCACGCGCGGGGTGTCTTCGCGGTAg > 8:54945/1‑137 (MQ=255) tCCATGGCCCCACCCAGCGCCTGCAGCAAGGTTGATTTGCCGGCGCCGTTGCGGCCCAGCACGGCAATGCGCTCGCCCGGCGGGATAAACAG‑CCGGGCAATGTTCAGCACAGGGGGGTAGTGTTCGCTGGAGCggta > 2:166338/1‑135 (MQ=255) tCCATGGCCCCACCCAGCGCCTGCAGCAAGGTTGATTTGCCGGCGCCGTTGCGGCCCAGCACGGCAATCCGCTCGCCCCCCGCGAGAATCAG‑CACCCCAAATTTCACGACAGGCGGGTAGTGATCGGTGTATCggga > 4:355195/1‑135 (MQ=255) cATGGCCCCACCCAGCGCCTGCAGCAAGGTTGATTTGCCGGCGCCGTTGCGGCCCAGCACGGCAATGCGCTCGCCCGGGGGGATATACAGACCGGCC‑ATGTTGAGGACAGGGGGGTTGTGGTCGGGGGAGCGGaatt > 5:162823/1‑135 (MQ=255) tGGCCCCACCCAGCGCCTGCAGCAAGGTTGATTTGCCGGCGCCGTTGCGGCCCAGCACGGCAATGCGCTCGCCCGGCTGGATATCCAG‑CCGGCCAATGTTCAGCACTGGCGGGTAGTCTTCGCTGTAGCGGAAGTTg < 8:208359/137‑1 (MQ=255) gCCCCACCCAGCGCCTGCAGCAAGGTTGATTTGCCGGCGCCGTTGCGGCCCAGCACGGCAATGCGCTCGCCCGGCTGGATATCCAG‑CCGGCCAATGTTCAGCACTGGCGGGTAGTCtt < 3:312253/118‑1 (MQ=255) gCCCCACCCAGCGCCTGCAGCAAGGTTGATTTGCCGGCGCCGTTGCGGCCCAGCACGGCAATGCGCTCGCCCGGCTGGATATCCAG‑CCGGCCAATGTTCAGCACTGGCGGGTAGTCtt > 4:312253/1‑118 (MQ=255) gCCCCACCCAGCGCCTGCAGCAAGGTTGATTTGCCGGCGCCGTTGCGGCCCAGCACGGCAATGCGCTCGCCCGGCGGGATATCCAG‑CCGGCCCATGTTGATCACTGGCGGGGTGTCTTCGCTGGAGCGGAAGTTGGc > 8:456283/1‑137 (MQ=255) ccccACCCAGCGCCTGCAGCAAGGTTGATTTGCCGGCGCCGTTGCGGCCCAGCACGGCAATGCGCTCGCCCGGCGGGATTTCCAG‑CCGGCCAATGTTGAGCGCGGGCGGGGTGTGTTCGCGGTAGCGGGTGGTGGcc > 4:91967/1‑137 (MQ=255) cggcagcaAGGTTGATTTGCCGGCGCCGTTGCGGCCCAGCACGGCAATGCGCTCGCCCGGCTGGATATCCAG‑CCGGCCAATGTTCAGCACTGGCGGGTAGTCTTCGCTGTAGCGGAAGTTGGCCTGGCGCAGGCGGt < 6:485841/135‑1 (MQ=255) cTGCAGCAAGGTTGATTTGCCGGCGCCGTTGCGGCCCAGCACGGCAATGCGCTCGCCCGGCTGGATATACAT‑CCGGCCAATGTTCAGCACTGGCGGGTAGTCTTCGCTGTAGCGGCAGTTGGCCTGGCGCAGGCGGt > 6:332615/1‑137 (MQ=255) agcaAGGTTGATTTGCCGGCGCCGTTGCGGCCCAGCACGGCAATGCGCTCGCCCGGCGGGGTTTACAG‑CCGGCCCATGTTGAGCACGGGGGGGGTGTGTTCGCTGTTGCGGAAGTTGGGCGGGCGCCGGCGGTACta > 7:124850/1‑136 (MQ=255) gcaAGGTTGATTTGCCGGCGCCGTTGCGGCCCAGCACGGCAATGCGCTCGCCCGGCGGGATATCCAG‑CCCGCCCATGTTAAGCACTGGCGGGGTGTGTTAGGTGTAGCGGGAGTTGGCCTGGGGCAGGCGGTGCTCg > 4:270608/1‑137 (MQ=255) gATTTGCCGGCGCCGATGCGGCCCAGCACGGCAATGCGCTCGCCCGGCTGGATATCCAG‑CCGGCCAATGTTCAGCACTGGCGGGTAGTCTTCGCTGTAGCGGAAGTTGGCCTGGCGCAGGCGGTACTCGCCGTGAAt < 4:91463/137‑1 (MQ=255) tGCCGGCGCCGTTGCGGCCCAGCACGGCAATGCGCTCGCGCGGCGGGCTATGCAG‑CCGGCCCAAGTTGAGCCCTGGCGGGTTGTGTTAGCGGTAGCGGAAGTTGGCCTGGGGCCGGCGGTAGGCGCCGTGGATGGcc > 4:395171/1‑137 (MQ=255) tGCCGGCGCCGTTGCGGCCCAGCACGGCAATGCGCTCGCCCGGCTGGATATCCAG‑CCGGCCAATGTTCAGCACTGGCGGGTAGTCTTCGCTGTAGCGGAAGTTGGCCTGGCGCAGGCGGTACTCGCCGTGAATGGcc < 5:148928/137‑1 (MQ=255) tGCCGGCGCCGTTGCGGCCCAGCACGGCAATGCGCTCGCCCGGCTGGATATCCAG‑CCGGCCAATGTTCAGCACTGGCGGGTAGTCTTCGCTGTAGCGGAAGTTGGCCTGGCGCAGGCGGTACTCGCCGTGAATGGcc < 8:117057/137‑1 (MQ=255) cGTTGCGGCCCAGCACGGCAATGCGCTCGCCCGGCTGGATATCCAG‑CCGGCCAATGTTCAGCACTGGCGGGTAGTCTTCGCTGTAGCGGAAGTTGGCCTGGCGCAGGCGGTACTCGCCGTGAATGGCCGGCAGGTGc < 5:269422/137‑1 (MQ=255) cGTTGCGGCCCAGCACGGCAATGCGCTCGCCCGGCTGGATATCCAG‑CCGGCCAATGTTCAGCACTGGCGGGTAGTCTTCGCTGTAGCGGAAGTTGGCCTGGCGCAGGCGGTACTCGCCGTGAATGGCCGGCAGGTGc < 8:434788/137‑1 (MQ=255) cGTTGCGGCCCAGCACGGCAATGCGCTCGCCCGGCTGGATATCCAG‑CCGGCCAATGTTCAGCACTGGCGGGTAGTCTTCGCTGTAGCGGAAGTTGGCCTGGCGCAGGCGGTACTCGCCGTGAATGGCCGGCAGGTGc < 4:409239/137‑1 (MQ=255) gCCCAGCACGGCAATGCGCTCGCCCGGCTGTATATCCAG‑CCGGCCAATGTTCAGCACTGGCGGGTAGTCTTCGCTGTAGCGGAAGTTGGCCTGGCGCAGGCGGTACTCGCCGTGAATGGCCGGCAGGTGCACGCggg < 8:23092/137‑1 (MQ=255) gCCCAGCACGGCAATGCGCTCGCCCGGCTGGATATCCAG‑CCGGCCAATGTTCAGCACTGGCGGGTAGTCTTCGCTGTAGCGGAAGTTGGCCTGGCGCAGGCGGTACTCGCCGTGAATGGCCGGCAGGTGCACGCggg < 1:7432/137‑1 (MQ=255) gCCCAGCACGGCAATGCGCTCGCCCGGCTGGATATCCAG‑CCGGCCAATGTTCAGCACTGGCGGGTAGTCTTCGCTGTAGCGGAAGTTGGCCTGGCGCAGGCGGTACTCGCCGTGAATGGCCGGCAGGTGCACGCggg < 3:426118/137‑1 (MQ=255) gCCCAGCACGGCAATGCGCGCGCCCGGCTGGATATCCAG‑CCGGCCAATGTTCAGCACTGGCGGGTAGTCTTCGCTGTAGCGGAAGTTGGCCTGGCGCAGGCGGTACTCGCCGTGAATGGCCGGCAGGTGCACGCggg < 4:438800/137‑1 (MQ=255) cACGGCAATGCGCTCGCCCGGCTGGATATCCAG‑CCGGCCAATGTTCAGCACTGGCGGGTAGTCTTCGCTGTAGCGGAAGTTGGCCTGGCGCAGGCGGTACTCGCCGTGAATGGCCGGCAGGTGCACGCGGGCTTCGc < 2:399014/137‑1 (MQ=255) cGGCAATGCGCTCGCCCGGCTGGATATCCAG‑CCGGCCAATGTTCAGCACTGGCGGGTAGTCTTCGCTGTAGCGGAAGTTGGCCTGGCGCAGGCGGTACTCGCCGTGAATGGCCGGCAGGTGCACGCGGGCTTCGCCt < 2:301766/137‑1 (MQ=255) cGGCAATGCGCTCGCCCGGCTGGATATCCAG‑CCGGCCAATGTTCAGCACTGGCGGGTAGTCTTCGCTGTAGCGGAAGTTGGCCTGGCGCAGGCGGTACTCGCCGTGAATGGCCGGCAGGTGCACGCGGGCTTCGCCt < 8:406624/137‑1 (MQ=255) ggCAATGCGCTCGCCCGGCTGGATATCCAG‑TCGGCCAATGTTCAGCACTGGCGGGTAGTCTTCGCTGTAGCGGAAGTTGGCCTGGCGCAGGCGGTACTCGCCGTGAATGGCCGGCAGGTGCACGCggg > 8:288760/1‑128 (MQ=255) ggCAATGCGCTCGCCCGGCTGGATATCCAG‑TCGGCCAATGTTCAGCACTGGCGGGTAGTCTTCGCTGTAGCGGAAGTTGGCCTGGCGCAGGCGGTACTCGCCGTGAATGGCCGGCAGGTGCACGCggg < 7:288760/128‑1 (MQ=255) tGCGCTCGCCCGGCTGGATATACAG‑CCGGCCAATGTTGAGCACTGGGGGGTTGTCTTAGGTGTTGCGGATGTTTGGCTGGGGCAGGCGGGACTCGCCGGGAATGGCCGGCCGGTGCACGCGGGCTTCGCCGTGgggg > 8:307955/1‑137 (MQ=255) gcgcTCGCCCGGCTGGATATCCAG‑CCGGCCAATGTTCAGCACTGGCGGGTAGTCTTCGCTGTAGCGGAAGTTGGCCTGGCGCAGGCGGTACTCGCCGTGAATGGCCGGCAGGTGCACGCGGGCTTCGCCTTCGGGGt < 2:24243/137‑1 (MQ=255) gcgcTCGCCCGGCTGGATATCCAG‑CCGGCCAATGTTCAGCACTGGCGGGTAGTCTTCGCTGTAGCGGAAGTTGGCCTGGCGCAGGCGGTACTCGCCGTGAATGGCCGGCAGGTGCACGCGGGCTTCGCCTTCGGGGt < 7:307955/137‑1 (MQ=255) gcgcTCGCCCGGCGGGATATCCAG‑CCGGCCAATGTTCAGCACTGGCGGGTAGTCTTCGCTGTAGCGGAAGTTGGCCTGGCGCAGGCGGTACTCGCCGTGAATGGCCGGCAGGTGCACGCGGGCTTCGCCTTCGGGGt < 4:344815/137‑1 (MQ=255) cccgCTGGATATACAG‑CCGGCCAATGTTCAGCACTGGCGGGTAGTCATCGCTGTAGGGGTAGTTGGCCTGGCGCAGGCGGTACTCGCCGTGAATGGCCGGCAGGTGCACGCGGGCTTCGCCTTCGGGGTGATCGccc > 6:442998/4‑137 (MQ=255) | GGTCGAGGTGGGCCATGGCGATGCCGTCCAGGCTGATCTCGCCCTGCACCAGATCCATGGCCCCACCCAGCGCCTGCAGCAAGGTTGATTTGCCGGCGCCGTTGCGGCCCAGCACGGCAATGCGCTCGCCCGGCTGGATATCCAG‑CCGGCCAATGTTCAGCACTGGCGGGTAGTCTTCGCTGTAGCGGAAGTTGGCCTGGCGCAGGCGGTACTCGCCGTGAATGGCCGGCAGGTGCACGCGGGCTTCGCCTTCGGGGTGATCGACC > ACB143/916562‑916827 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |