New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	KT2440	4016566 =	35 (0.680)	32 (0.790)	25/198	0.3	51.8%	intergenic (‑616/+52)	CJ019_03793/emrB_3	hypothetical protein/Multidrug export protein EmrB
	?	KT2440	= 4016553	32 (0.790)					intergenic (‑603/+65)	CJ019_03793/emrB_3	hypothetical protein/Multidrug export protein EmrB

ATTACTTCACCTTGATGAGCTGGGTGTTTGCCGGGTTGATTCTGCTGGTGTGGTTCGCCAAGCCGCCCTTTACCGCTAAGGCGGGCCCGGCATCGGCGGGGCATTGAGCTAAAATCAAGGCAAGATCCCGATGCTCTCGCTCTCGCTCTCGCTCTCGCT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  KT2440/4016724‑4016566 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gctctcgctctcgctctcgctctcgctTCGGCTTTTGATTTTGCTTCTAAGCGCGCGATAGCCCAGGCGCCGCGGATTGCGACTTCAGGAGGCCGAGCGCAGGGCTTGCGAAGGGAGGTGACGGGCATGGATGCCCGTCAAGCGCTGGGCCCCAGGATGG  <  KT2440/4016553‑4016421                                                                                                                                                                                                                                                                                                      ATTACTTCACCTTGATGAGCTGGGTGTTTGCCGGGTTGATTCTGCTGGTGTGGTTCGCCTAGCCGCCCTTTACCGCTAAGGCTGGCCCGGCATAGGCGGGGCATTGCGCTAAAATCCAGGCCTGATCGCGCTGCT                                                                                                                                                               >  2:271872/1‑135   TACTTCACCTTGATGAGCTGGGTGTTTGCCGGGTTGATTCTGCTGGTGTGGTTCGCCAAGCCGCCCTTTACCGCTAAGGCGGGCCCGGCATCGGCGGGGCATTGAGCTAAAATCAAGGCAAGATCCCGATGCTCT                                                                                                                                                             >  7:88179/1‑135     CTTCACCTTGATGAGCTGGGTGTTTGCCGGGTTGATTCTGCTGGTGTGGTTCGCCAAGCCGCCCTTTACCGCTAAGGCGGGCCCGGCATCGGCGGGGCATTGAGCTAAAATCAAGGCAAGATCCCGATGCTCTC                                                                                                                                                            <  8:324203/134‑1     CTTCACCTTGATGAGCTGGGTGTTTGCCGGGTTGATTCTGCTGGTGTGGTTCGCCAAGCCGCCCTTTACCGCTAAGGCGGGCCCGGCATCGGCGGGGCATTGAGCTAAAATCAAGGCAAGATCCCGATGCTCTC                                                                                                                                                            <  7:59135/134‑1           CTTGATGAGCTGGGTGTTTGCCGGGTTGATTCTGCTGGTGTGGTTCGCCAAGCCGCCCTTTACCGCTAAGGCGGGCCCGGCATCGGCGGGGCATTGAGCTAAAATCAAGGCAAGATCCCGATGCTCTCGCTCTCG                                                                                                                                                     >  1:91123/1‑135           CTTGATGAGCTGGGTGTTTGCCGGGTTGATTCTGCTGGTGTGGTTCGCCAAGCCGCCCTTTACCGCTAAGGCGGGCCCGGCATCGGCGGGGCATTGAGCTAAAATCAAGGCAAGATCCCGATGCTCTCGCTCTCG                                                                                                                                                     >  7:251021/1‑135            TTGATGAGCTGGGTGTTTGCCGGGTTGATTCTGCTGGTGTGGTTCGCCAAGCCGCCCTTTACCGCTAAGGAGGGCCCTGCATCGGATGGGCATTGAGCTAAAATCAAGGCAAGATCCCGATGCTCTCGTTCTCGC                                                                                                                                                    <  6:102333/135‑1             TGATGAGCTGGGTGTTTGCCGGGTTGATTCTGCTGGTGTGGTTCGCCAAGCCGCCCTTTACCGCTAAGGCGGGCCCTGCATCGGCGGGGCATTGAGCTAAAATCAAGGCAAGATCCCGATGCTCTCGCTCTCGCT                                                                                                                                                   >  4:233654/1‑135             TGATGAGCTGGGTGTTTGCCGGGTTGATTCTGCTGGTGTGGTTCGCCAAGCCGCCCTTTACCGCTAAGGCGGGCCCGGCATCGGCGGGGCATTGAGCTAAAATCAAGGCAAGATCCCGATGCTCTCGCTCTCGCT                                                                                                                                                   >  8:228073/1‑135             TGATGAGCTGGGTGTTTGCCGGGTTGATTCTGCTGGTGTGGTTCGCCAAGCCGCCCTTTACCGCTAAGGCGGGCCCGGCATCGGCGGGGCATTGAGCTAAAATCAAGGCAAGATCCCGATGCTCTCGCTCTCGC                                                                                                                                                    >  7:229112/1‑134             TGATGAGCTGGGTGTTTGCCGGGTTGATTCTGCGGGTGTGGTTCGAAAAGCCGACCTTTACCGCTAAGGCGGGCCCGGCATCGGCGGGGCATTGAGCTAAAATCAAGGCAAGATCCCGATGCTCTCGCTCTCGCT                                                                                                                                                   >  7:260652/1‑135                  AGCTGGGTGTTTGCCGGGTTGATTCTGCTGGTGTGGTTCGCCAAGCCGCCCTTTACCGCTAAGGCGGGCCCGGCATCGGCGGGGCATTGAGCTAAAATCAAGGCAAGATCCCGATGCTCTCGCTCTCGCTCTCGC                                                                                                                                              >  5:76729/1‑135                  AGCTGGGTGTTTGCCGGGTTGATTCTGCTGGTGTGGTTCGCCAAGCCGCCCTTTACCGCTAAGGCGGGCCCGGCATCGGCGGGGCATTGAGCTAAAATCAAGGCAAGATCCCGATGCTCTCGCTCTCGCTCTCGC                                                                                                                                              >  3:311300/1‑135                  AGCTGGGTGTTTGCCGGGTTGATTCTGCTGGTGTGGTTCGCCAAGCCGCCCTTTACCGCTAAGGCGGGCCCGGCATCGGCGGGGCATTGAGCTAAAATCAAGGCAAGATCCCGATGCTCTCGCTCTCGCTCTCGC                                                                                                                                              >  5:227595/1‑135                  AGCTGGGTGTTTGCCGGGTTGATTCTGCTGGTGTGGTTCGCCAAGCCGCCCTTTACCGCTAAGGCGGGCCCGGCATCGGCGGGGCATTGAGCTAAAATCAAGGCAAGATCCCGATGCTCTCGCTCTCGCTCTCGC                                                                                                                                              >  1:222011/1‑135                  AGCTGGGTGTTTGCCGGGTTGATTCTGCTGGTGTGGTTCGCCAAGCCGCCCTTTACCGCTAAGGCGGGCCCGGCATCGGCGGGGCATTGAGCTAAAATCAAGGCAAGATCCCGATGCTCTCGCTCTCGCTCTCGC                                                                                                                                              >  5:84195/1‑135                       GGTGTTTGCCGGGTTGATTCTGCTGGTGTGGTTCGCCAAGCCGCCCTTTACCGCTAAGGCGGGCCCGGCATCGGCGGGGCATTGAGCTAAAATCAAGGCAAGATCCCGATGCTCTCGCTCTCGCTCTCGCTCTCG                                                                                                                                         >  7:70027/1‑135                                   GTTGATTCTGCTGGTGTGGTTCGCCAAGCCGCCCTTTACCGCTAAGGCGGGCCCGGCATCGGCGGGGCATTGAGCTAAAATCAAGGCAAGATCCCGATGCTCTCGCTCTCGCTCTCGCTCTCGCTTCGGCTTTTG                                                                                                                             <  1:271872/135‑1                                      GATTCTGCTGGTGTGGTTCGCCAAGCCGCCCTTTACCGCTAAGGCGGGCCCGGCATCGGCGGGGCATTGAGCTAAAATCAAGGCAAGATCCCGATGCTCTCGCTCTCGCTCTCGCTCTCGCTTCGGCTTTTGATT                                                                                                                          >  5:28979/1‑135                                                    GGTTCGCCAAGCCGCCCTTTAGCGCTAAGGCGGGCCCGGCATCGGCGGGGCATTGAGCTAAAATCAAGGCAAGATCCCGATGCTCTCGCTCTCGCTCTCGCTCTCGCTTCGGCTTTTGATTTTGCTTCTAAGCGC                                                                                                            <  6:211098/135‑1                                                    GGTTCGCCAAGCCGCCCTTTACCGCTAAGGCGGGCCCGGCATCGGCGGGGCATTGAGCTAAAATCAAGGCAAGATCCCGATGCTCTCGCTCTCGCTCTCGCTCTCGCTTCGGCTTTTGATTTTGCTTCTAAGCGC                                                                                                            >  4:87095/1‑135                                                      TTCGCCAAGCCGCCCTTTACCGCTAAGGCGGGCCCGGCATCGGCGGGGCATTGAGCTAAAATCAAGGCAAGATCCCGATGCTCTCGCTCTCGCTCTCGCTCTCGCTTCGGCTTTTGATTTTGCTTCTAAGCGCGC                                                                                                          <  6:227595/135‑1                                                        CGCCAAGCCGCCCTTTACCGCTAAGGCGGGCCCGGCATCGGCGGGGCATTGAGCTAAAATCAAGGCAAGATCCCGATGCTCTCGCTCTCGCTCTCGCTCTCGCTTCGGCTTTTGATTTTGCTTCTAAGCGCGCG                                                                                                         >  5:337585/1‑134                                                          CCAAGCCGCCCTTTACCGCTAAGGCGGGCCCGGCATCGGCGGGGCATTGAGCTAAAATCAAGGCAAGATCCCGATGCTCTCGCTCTCGCTCTCGCTCTCGCTGCGGCTGTTGATTTTGCTTCTAAGCGCGCGATA                                                                                                      >  5:184172/1‑135                                                           catgcgGCCCTTTACCGGTACGGCGGGCCCGGCATGGGCGGGGCATTGAGCTAAAATCAAGGCAATATCCCGATGCTCTCGCTCTCGCTCTCGCTCTCGCTTCGGCTTTTGATTTTGCTTCTAAGCGCGCGATAG                                                                                                     <  4:311300/129‑1                                                           CAAGCCGCCCTTTACCGCTAAGGCGGGCCCGGCATCGGCGGGGCATTGAGCTAAAATCAAGGCAAGATCCCGATGCTCTCGCTCTCGCTCTCGCTCTCGCTTCGGCTTTTGATTTTGCTTCTAAGCGCGCGATAG                                                                                                     <  6:76729/135‑1                                                           CAAGCCGCCCGTTACCGCTAAGGCGGGCCCGGCATCGGCGGGGCATTGAGCTAAACTCAAGGCAAGATCCCGATGCTCTCGCTCTCGCGCTCGCTCTCGCTTCGGCTTTTGATTTTGCTTCTAAGCGCGCGATAG                                                                                                     <  5:306322/135‑1                                                             AGCCGCCCTTTACCGCTAAGGCGGGCCCGGCATCGGCGGGGCATTGAGCTAAAATCAAGGCAAGATCCCGATGCTCTCGCTCTCGCTCTCGCTCTCGCTTCGGCTTTTGATTTTGCTTCTAAGCGCGCGATAGCC                                                                                                   >  3:64498/1‑135                                                                    CTTTACCGCTAAGGCGGGCCCGGGATCGGCGGGGCTTTGAGCTAAAATCTAGCCAAGATCCCGATGCTCTCGCTCTCGCTCTCGCTCTCGCTTCGGCTTTTGATTTTGCTTCTAAGCGCGCGATAGCCCAGGCGC                                                                                            <  5:154483/135‑1                                                                          CGCTAAGGCGGGCCCGGCATCGGCGGGGCATTGAGCTAAAATCAAGGCAAGATCCCGATGCTCTCGCTCTCGCTCTCGCTCTCGCTTCGGCTTTTGATTTTGCTTCTAAGCGCGCGATAGCCCAGGCGCCGCGGA                                                                                      >  3:108532/1‑135                                                                          CGCTAAGGCGGGCCCGGCATCGGCGGGGCATTGAGCTAAAATCAAGGCAAGATCCCGATGCTCTCGCTCTCGCTCTCGCTCTCGCTTCGGCTTTTGATTTTGCTTCTAAGCGCGCGATAGCCCAGGCGCCGCGGA                                                                                      >  8:226171/1‑135                                                                             TAAGGCGGGCCCGGCATCGGCGGGGCATTGAGCTAAAATCAAGGCAAGATCCCGATGCTCTCGCTCTCGCTCTCGCTCACGCTTCGGCAGTTGATTTTGCTTCTAAGCGCGCGATCGCCCACGCGCCGCGGATTG                                                                                   >  7:180416/1‑135                                                                                  CGGGCCCGGCATCGGCGGGGCATTGAGCTAAAATCAAGGCAAGATCCCGATGCTCTCGCTCTCGCTCTCGCTCTCGCTTCGGCTTTTGATTTTGCTTCTAAGCGCGCGATAGCCCAGGCGCCGCGGATTGggggg                                                                              >  3:120554/1‑130                                                                                    GGCCCGGCATCGGCGGGGCATTGAGCTAAAATCAAGGCAAGATCCCGATGCTCTCGCTCTCGCTCTCGCTCTCGCTTCGGCTTTTGATTTTGCTTCTAAGCGCGCGATAGCCCAGGCGCCGCGGATTGCGACTTC                                                                            <  8:187692/135‑1                                                                                    GGCCCGGCATCGGCGGGGCATTGAGCTAAAAACACGGCAAGCTCCCGATGCTCTCGCTCTCGCTCTCGCTCTCGCTTCGGCTTTTGATTTTGCTTCTAAGCGCGCGATAGCCCCGGCGCCGCGGATTGCGACTTC                                                                            <  3:44114/135‑1                                                                                       CCGGCATCGGCGGGGCATTGAGCTAAAATCAAGGCAAGATCCCGATGCTCTCGCTCTCGCTCTCGCTCTCGCTTCGGCTTTTGATTTTGCTTCTAAGCGCGCGATAGCCCAGGCGCCGCGGATTGCGCCTTCA                                                                           >  3:303078/1‑133                                                                                       CCGGCATCGGCGGGGCATTGAGCTAAAATCAAGGCAAGATCCCGATGCTCTCGCTCTCGCTCTCGCTCTCGCTTCGGCTTTTGATTTTGCTTCTAAGCGCGAGATAGCCCAGGCGCCGCGGATTGCGACTTCA                                                                           >  4:104394/1‑133                                                                                         GGCATCGGCGGGGCATTGAGCTAAACTCAAGGCAAGATCCCGATGCTCTCGCTCTCGCTCTCGCTCTCGCTTCGGCTTTTGATTTTGCTTCTAAGCGCGCGATAGCCCAGGCGCCGCGGATTGCGACTTCAGGAG                                                                       <  1:306470/135‑1                                                                                          GCATCGGCGGGGCATTGAGCTAAAATCAAGGCAAGATCCCGATGCTCTCGCTCTCGCTCTCGCTCTCGCTTCGGCTTTTGATTTTGCTTCTAAGCGCGCGATAGCCCAGGCGCCGCGGATTGCGACTTCAGGAGG                                                                      <  1:178636/135‑1                                                                                              CGGCGGGGCATTGAGCTAAAATCAAGGCAAGATCCCGATGCTCTCGCTCTCGCTCTCGCTCTCGCTTCGGCTTTTGATTTTGCTTCTAAGCGCGCGATAGCCCAGGCGCCGCGGATTGCGACTTCAGGAGGCCGA                                                                  <  6:84195/135‑1                                                                                              CGGCGGGGCATTGAGCTAAAATCAAGGCAAGATCCCGATGCTCTCGCTCTCGCTCTCGCTCTCGCTTCGGCTTTTGATTTTGCTTCTAAGCGCGCGATAGCCCAGGCGCCGCGGATTGCGACTTCAGGAGGCCGA                                                                  >  8:296148/1‑135                                                                                                         TGAGCTAAAATCAAGGCAAGATCCCGATGCTCTCGCTCTCGCTCTCGCTCTCGCTTCGGCTTTTGATTTTGCTTCTAAGCGCGCGATAGCCCAGGCGCCGCGGATTGCGACTTCAGGAGGCCGAGCGCAGGGCTT                                                       <  3:117540/135‑1                                                                                                         TGAGCTAAAATCAAGGCAAGATCCCGATGCTCTCGCTCTCGCTCTCGCTCTCGCTTCGGCTTTTGATTTTGCTTCTAAGCGCGCGATAGCCCAGGCGCCGCGGATTGCGACTTCAGGAGGCCGAGCGCAGGGCTT                                                       <  4:210559/135‑1                                                                                                         TGAGCTAAAATCAAGGCAAGATCCCGATGCTCTCGCTCTCGCTCTCGCTCTCGCTTCGGCTTTTGATTTTGCTTCTAAGCGCGCGATAGCCCAGGCGCCGCGGATTGCGACTTCAGGAGGCCGAGCGCAGGGCTT                                                       <  6:27431/135‑1                                                                                                              TAAAATCAAGGCAAGATCCCGATGCTCTCGCTCTCGCTCTCGCTCTCGCTGCGGCTGTTGATTTTGCTTCTAAGCGCGCGATAGCCCAGGCGCCGCGGAGTGCGCCTGCAGGAGTCCGCGCGCAGGTCGTGCGAA                                                  >  1:113802/1‑135                                                                                                                   TCAAGGCAAGATCCCGATGCTCTCGCTCTCGCTCTCGCTCTCGCTTCGGCTTTTGATTTTGCTTCTAAGCGCGCGATAGCCCAGGCGCCGCGGATTGCGACTTCAGGAGGCCGAGCGCAGGGCTTGCGAAGGGAG                                             <  1:250837/135‑1                                                                                                                              TCCCGATGCTCTCGCTCTCGCTCTCGCTCTCGCTTCGGCTTTTGATTTTGCTTCTAAGCGCGCGATAGCCCAGGCGCCGCGGATTGCGACTTCAGGAGGCCGAGCGCAGGGCTTGCGAAGGGAGGTGACGGGCAT                                  <  5:90876/135‑1                                                                                                                                CCGATGCTCTCGCTCTCGCTCTCGCTCTCGCTTCGGCTTTTGATTTTGCTTCTAAGCGCGCGATAGCCCAGGCGCCGCGGATTGCGACTTCAGGAGGCCGAGCGCAGGGCTTGCGAAGGGAGGTGACCGGCATGG                                <  4:108532/135‑1                                                                                                                                 CGATGCGCTCGCTCTCGCTCTCGCTCGGGCTTCGGATTTTTATTTTGCTTCTAAGCGCGCGATAGCCCAGGCGCGGCGTATTGCGACTTCAGGAGGCCGAGCGCAGGGCTTGCGAAGGTAGGTGACGGGAATGGA                               <  8:70027/135‑1                                                                                                                                            CTCTCGCTCTCGCTCTCGCTTCGGCTTTTGATTTTGCTTCTACGCGCGCGATAGCCCAGGCGCCGCGGATTGCGACTTCAGGAGGCCGAGCGCAGGGCTTGCGAAGGGAGGTGACGGGCATGGATGCCCGTCAAG                    <  5:318436/135‑1                                                                                                                                             TCTCGCTCTCGCTCTCGCTTCGGCTTTTGATTTTGCTTCTAAGCGCGCGATAGCCCAGGCGCCGCGGATTGCGACTTCAGGAGGCCGAGCGCAGGGCTTGCGAAGGGAGGTGACGGGCATGGATGCCCGTCAAGC                   <  4:75915/135‑1                                                                                                                                             TCTCGCTCGCGCTCTCGCTTCGGCTTTTGATTTTGCTTCTACGCGCGCGATAGCCCAGGCGCCGCGGATTGCGACTTCAGGAGGCCGAGCGCAGGGCTTGCGAAGGGAGGTGACGGGCATGGATGCCCGTCAAGC                   <  1:312693/135‑1                                                                                                                                                CGCTCTCGCTCTCGCTTCGGCTTTTGATTTTGCTTCTAAGCGCGCGATAGCCCAGGCGCCGCGGATTGCGACTTCAGGAGGCCGAGCGCAGGGCTTGCGAAGGGAGGTGACGGGCATGGATGCCCGTCAAGCG                  <  5:73585/133‑1                                                                                                                                                CGCTCTCGCTCTCGCTTCGGCTTTTGATTTTGCTTCTAAGCGCGCGATAGCCCAGGCGCCGCGGATTGCGACTTCAGGAGGCCGAGCGCAGGGCTTGCGAAGGGAGGTGACGGGCATGGATGCCCGTCAAGCG                  <  8:104539/133‑1                                                                                                                                                CGCGCTCGCTCTCGCTTCGGCTTTTGATTGTGCTTCTAAGCGCGCGATAGCCCAGGCGCCGCGGATGGCGACTTCAGGAGGCCGAGCGCAGGGCTTGCGAAGGGAGGTGACGGGCATGGATGCCCGTCAAGCG                  <  8:12448/133‑1                                                                                                                                                  CTCTCGCTCTCGCTTCGGCTTTTGATTTTGCTTCTAAGCGCGCGATAGCCCAGGCGCCGCGGATTGCGACTTCAGGAGGCCGCGCGCAGGGCGTGCGAAGGGAGGTGACGGGGATGGCTGGCCGTCAACCCCTGG              >  8:135319/1‑135                                                                                                                                                   tcgCGCGCTCGCTGCGGCTTTTGATTTTGCTGCTACGCGCGCGATAGCCCCGGCGCCGCGGATGGCGACTTCAGGAGGCCGAGCGCAGGGCTTGCGAAGGGAGGTGACGGGCATGGATGCCCGTCAAGCGCTGGG             <  6:184172/132‑1                                                                                                                                                   tccCGCTCTCGCTTCGGCGTTTGTTTTTGCTTCTAAGCGCGCGATAGCCCAGGCGCCGCGGATTGCGACTTCAGGAGGCCGAGCGCAGGGCTTGCGAAGGGAGGTGACGGGCATGGATGCCCGTCAAGCGCTGGG             <  5:325669/132‑1                                                                                                                                                   TCTGGCTCTCGGTTCGGCTTTTGATTTTGCTTCTACGCGCGCGATAGCCCAGGCGCCGCGGATTGCGACTTCAGGAGGCCGAGCGCAGGGCTTGCGAAGGGAGGTGACGGGCATGGATGCCCGTCAAGCGCTGGG             <  3:206417/135‑1                                                                                                                                                   TCTCGCTCTCGCTTCGGCTTTTGATTTTGCTTCTACGCGCGCGATAGCCCAGGCGCCGCGGATTGCGACTTCAGGAGGCCGAGCGCAGGTCTTGCGAAGGGAGGTGACGGGCATGGATGCCCGGCAAGCGCTGGG             <  5:110364/135‑1                                                                                                                                                    CTCCCTCTCGCTTCGTCTTTTTATTTTGCTTCTAAGCGCGCGATAGCCCAGGAGCCTCGGTTTGCGACTTCAGGAGGCGGAGCGCAGGGCTTGCGAAGGGAGGTGACGGGCATGGATGCCCGTAAAGCGCTGGGC            <  8:321016/135‑1                                                                                                                                                      CGCGCTCGCTTCGGCTTTTGATTTTGCTGCTACGCGCGCGATAGCCCAGGCGCCGCGGATGGCGACGTCAGGAGGCCGAGCGCAGGGCTTGCGAAGGGAGGTGACGGGCCTGGATGCCCGTCAAGCGCTGGGC            <  2:12606/133‑1                                                                                                                                                       GCTCTCGCTTCGGCTTTTGATTTTGCTTCTCACCGCGCGACTGCCCTGGCGCCGCGGATGGCGAGTTCAGGCGGCCGAGCGCAGGGCTTGCGACGGGAGGTGACGGGCATGGATGCCCGTCAAGCGCTGGGCCCC         <  1:240271/135‑1                                                                                                                                                        CTCTCGCTTCGGCTTTTGATTTTGCTTCTAAGCGCGCGATAGCCCAGGCGCCGCGGATTGCGACTTCAGGAGGCCGAGCG                                                               >  2:24485/1‑80                                                                                                                                                        CTCTCGCTTCGGCTTTTGATTTTGCTTCTAAGCGCGCGATAGCCCAGGCGCCGCGGATTGCGACTTCAGGAGGCCGAGCG                                                               <  1:24485/80‑1                                                                                                                                                         gCTCGCTTCTGCTTTTGATTTTGCTTCTAACCGCGCGATCGCCCAGGCGCCGGGGATGGCGACTTCAGGAGGCCGAGCGCAGGGCTTGCGAAGGGAGGTGACGGGCATGGATGCCCGTCAAGCGCTGGGCCCCAG       <  6:186952/134‑1                                                                                                                                                         TCTCGCTTCGGCTTTTGATTTTGCTTCTACGGGCGCGATCGCCCCGGCGCCGCGGATTGCGACTTCAGGAGGCCGAGCGCTGGGCTTGCGAAGGGAGGGGACGGGCATGGATGCCCGTCAAGCGCTGGGCCCCAG       <  2:91123/135‑1                                                                                                                                                          CTCGCTTCGGCTTTTGATTTTGCTTCTAAGCGCGCGATAGCCCAGGCGCCGCGGATTGCGACTTCAGGAGGCCGAGCGCAGGGCTTGCGAAGGGAGGTGACGGGCATGGATGGCCGTCAAGCGCTGGGCCCCAGG      >  2:249389/1‑135                                                                                                                                                            CGCTTCGGCTTTTGATTTTGCTTCTAAGCGCGCGATAGCCCAGGCGCCGCGGATTGCGACTTCAGGAGGCCGAGCGCTGGGCTTGCGAAGGGAGGTGACGGGCATGGATGCCCGTCAAGCGCTGGGCCGCAGGAT    <  8:58401/135‑1                                                                                                                                                              CTTCGGCTTTTGATTTTGCTTCTAAGCGCGCGATAGCCCAGGCGCCGCGGATTGCGACTTCAGGAGGCCGAGCGCAGGGCTTGCGAAGGGAGGTGACGGGGATGGGTGCCCGGCACGCGCTGGGCCCCCGGGTGG  >  7:304272/1‑135                                                                                                                                                                                                                                                                                                      ATTACTTCACCTTGATGAGCTGGGTGTTTGCCGGGTTGATTCTGCTGGTGTGGTTCGCCAAGCCGCCCTTTACCGCTAAGGCGGGCCCGGCATCGGCGGGGCATTGAGCTAAAATCAAGGCAAGATCCCGATGCTCTCGCTCTCGCTCTCGCTCTCGCT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  KT2440/4016724‑4016566 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gctctcgctctcgctctcgctctcgctTCGGCTTTTGATTTTGCTTCTAAGCGCGCGATAGCCCAGGCGCCGCGGATTGCGACTTCAGGAGGCCGAGCGCAGGGCTTGCGAAGGGAGGTGACGGGCATGGATGCCCGTCAAGCGCTGGGCCCCAGGATGG  <  KT2440/4016553‑4016421

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.