New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? KT2440 3965421 =92 (1.250)40 (0.820)
+TACGGTAGCGGCGGCAACGGTGAACGACTGGTGAGAAATGGCCA
3/170 5.9 41.8% intergenic (+159/‑221) CJ019_03744/CJ019_00572 IS66 family transposase ISPpu14/IS110 family transposase ISPpu10
?KT2440 5821636 = 77 (1.040)intergenic (+3/+196) mtgA/rpoH Biosynthetic peptidoglycan transglycosylase/RNA polymerase sigma factor RpoH
Rejected: Coverage evenness skew score above cutoff.

TATCGGCGCTTGGGTGTTGAAAGGAGGAGGGGTGATTTCTCCTACGGTCTGTACTGCGCGAACAGTCAGAAGCGAGTTATGGCCCTCCTCCTCCCTTCAAGTCCTACCATACAAGCGGGTTTACCCGCGAA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  KT2440/3965551‑3965421
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑GCAGGCCCGGCCCTTTCGCGGGTAAACCCGCTCCTACGGG  >  KT2440/5821636‑5821675
                                                                                                                                   ||||||||||||||||||||||||||||||||||||||||||||                                        
TATGGGGGCTTGGGTGTGTAACGTAGGCGGGGGTATTCCTCCTACGGTCTGTACTGCGCGAACAGTCAGAAGCGAGTTATGGCCCTCCTCCTCCCTTCAAGTCCTACAATACAAGCGGGTTTACCCGCTAATACGGT                                                                                <  6:274432/137‑1
    GGCGCTTGGGTGTTGAAAGGAGGAGGGGTGATTTCTCCTACGGTCTGTACTGCGCGAACATTCAGAAGCGAGTTATGGCCCTCCGCCTCCCTTCAAGTCCTACCATACAAGCGGGTTTACCCGCGAATACGGTAGCG                                                                            >  2:271162/1‑137
    GGCGCTTGGGTGTTGAAAGGAGGAGGGGTGATTTCTCCTACGGTCTGTACTGCGCGAACAGTCAGAAGCGAGTTATGGCCCTCCTCCTCCCTTCAAGTCCTACCATACAAGCGGGTTTACCCGCGAATACGGTAGCG                                                                            >  2:19798/1‑137
    GGCGCTTGGGTGTTGAAAGGAGGAGGGGTGATTTCTCCTACGGTCTGTACTGCGCGAACAGTCAGAAGCGAGTTATGGCCCTCCTCCTCCCTTCAAGTACTACCATACAAGCGGGTTTACCCGCGAATACGGTAGCc                                                                            >  2:402925/1‑136
    GGCGCTTGGGTGTTGAAAGGAGGAGGGGTGATTTCTCCTACGGTCTGTACTGCGCGAACAGTCAGAAGCGAGTTATGGCCCTCCTCCTACCTTCAAGTCCTACCATACAATCGGGTTTACCCGCGAATACGGTAGCG                                                                            >  2:409407/1‑137
        ctgGGGTGTTGAAAGGAGGAGGGGTGATTTCTCCTACGGTCTGTACTGCGCGAACAGTCAGAAGCGAGTTATGGCCCTCCTCCTCCCTTCAAGTCCTACCATACAAGCGGGTTTACCCGCGAATACGGTAGCGGCGG                                                                        <  7:281316/134‑1
        CTTGGGTGTTGAAAGGAGGAGGGGTGATTTCTCCTACGGTCTGTACTGCGCGAACAGTCAGAAGCGAGTTATGGCCCTCCTCCTCCCTTCAAGTCCTACCATACAAGCGGGTTTACCCGCGAATACGGTAGCGGCGG                                                                        <  7:454071/137‑1
         TTGGGTGTTGAAAGGAGGAGGGGTGATTTCTCCTACGGTCTGTACTGCGCGAACAGTCAGAAGCGAGTTATGGCCCTCCTCCTCCCTTCAAGTCCTACCATACAAGCGGGTTTACCCGCGAATACGGTAGCGGCGGC                                                                       >  1:4442/1‑137
         TTGGGTGTTGAAAGGAGGAGGGGTGATTTCTCCTACGGTCTGTACTGCGCGAACAGTCAGAAGCGAGTTATGGCCCTCCTCCTCCCTTCAAGTCCTACCATACAAGCGGGTTTACCCGCGAATACGGTAGCGGCGGC                                                                       >  5:130141/1‑137
         TTGGGTGTTGAAACGAGGAGGGGTGATTTCTCCTACGGTCTGTACTGCGCGAACAGTCAGAAGCGAGTTATGGCCCTCCTCCTCCCTTCAAGTCCTACCATACAAGCGGGTTTACCCGCGAATACGGTAGCGGCGGC                                                                       >  3:157954/1‑137
                  tAAAGGAGGAGGGGTGATTTCTCCTACGGTCTGTACTGCGCGAACAGGCAGAAGCGAGTTATGGCCCTCCTCCTCCCTTCAAGTCCTACCATACAAGCGGGTTTACCCGCGAATACGGTAGCGGCGGCAACGGTGAA                                                              <  5:180669/136‑1
                  tAAAGGAGGAGGGGGGATTTCTCCTACGGTCTGTACTGCGCGAACAGTCAGAAGCGAGTTATGGCCCTCCTCCTCCCTTCAAGTCCTACCATACAAGCGGGTTTACCCGCGAATACGGTAGCGGCGGCAACGGTGAA                                                              <  6:118299/136‑1
                      GGAGGAGGGGTGATTTCTCCTACGGTCTGTACTGCGCGAACAGTCAGAAGCGAGTTATGGCCCTCCTCCTCCCTTCAAGTCCTACAATACAAGCGGGTTTACCCGCGAATACGGTAGCGGCGGCAACGGTGAACGAC                                                          >  5:248211/1‑137
                       gcggcGGGGGGATTTCTCCTACGGTCTGTACTGCGCTAACAGTCAGAAGCGAGTTATGGCCCTCCGCCTCCCTTCAAGTCCTACCATACAAGCGGGTTTACCCGCGAATACGGTAGCGGCGGCAACGGTGAACGACT                                                         <  4:55359/132‑1
                          GAGGGGTGATTTCTCCTACGGTCTGTACTGCGCGAACAGTCAGAAGCGAGTTATGGCCCTCCTCCTCCCTTCAAGTCCTACCATACAAGCGGGTTTACCCGCGAATACGGTAGCGGCGGCAGCGGTGAACGACTGGT                                                      >  6:19390/1‑137
                             GGGTGATTGCCCCTCCGGGCTTTACTGCGCGAACCGGCAGAAGCGTGTTATGGCCCTCCTCCTCCCTTCACGTCCTACCATCCAAGCGGGTTTCCCCGCGAATACGGTAGCGGCGGCAACGGTGAACGACTGGTGAG                                                   <  4:437301/137‑1
                                    TTCTCGTACGGTCTGTACTGCGCGAACAGTCAGAAGCGAGTTATGGCCCTCCTCCTCCCTTCAAGTCCAACCATACAAGCGGGTTTACCCGCGAATACGGTAGCGGCGGCAACGGTGAACGACTGGTGAGAAATGGC                                            <  2:171625/137‑1
                                     TCTCCTACGGTCTGTACTGCGCGAACAGTCAGAAGCGAGTTATGGCCCTCCTCCTCCCTTCAAGTCCTACCATACAAGCGGGTTTACCCGCGAATACGGTAGCGGCGGCAACGGTGAACGACTGGTGAGAAATGGCC                                           >  5:405514/1‑137
                                          TACGGTCTGTACTGCGCGAACAGTCACAAGCGAGTTATGGCCCTCCTCCTCCCTTCAAGTCCTACCATACAAGGGTGTTTACCCGCGAATACGGTAGCGGCGGCAACGGTGAACGACTGGTGAGAAATGGCCAGCAG                                      <  4:139224/137‑1
                                            CGGTCTGTACTGCGCGAACAGTCAGAAGCGAGTTATGGCCCTCCTCCTCCCTTCAAGTCCTACCATACAAGCGGGTTTACCCGCGAATACGGTAGCGGCGGCAACGGTGAACGACTGGTGAGAAATGGCCAGCAGGC                                    >  1:125203/1‑137
                                                    ACTGCGCGAACAGTCAGAAGCGAGTTATGGCCCTCCTCCTCCCTTCAAGTCCTACCATACAAGCGGGTTTACCCGCGAATACGGTAGCGGCGGCAACGGTGAACGACTGGTGAGAAATGGCCAGCAGGCCCGGCCCT                            >  2:427704/1‑137
                                                    ACTGCGCGAACAGTCAGAAGCGAGTTATGGCCCTCCTCCTCCCTTCAAGTCCTACCATACAAGCGGGTTTACCCGCGAATACGGTAGCGGCGGCAACGGTGAACGACTGGTGAGAAATGGCCAGCAGGCCCGGCCCT                            >  2:401618/1‑137
                                                    ACTGCGCGAACAGTCAGAAGCGAGTTATGGCCCTCCTCCTCCCTTCAAGTCCTACCATACAAGCGGGTTTACCCGCGAATACGGTAGCGGCGGCAACGGTGAACGACTGGTGAGAAATGGCCAGCAGGCCCGGCCCT                            <  2:35549/137‑1
                                                     CTGCGCGAACAGTCAGAAGCGAGTTATGGCCCTCCTCCTCCCTTCAAGTCCTACCATACAAGCGGGTTTACCCGCGAATACGGTAGCGGCGGCAACGGTGAACGACTGGTGAGAAATGGCCAGCAGGCCCGGCCCTT                           <  6:140716/137‑1
                                                     CTGCGCGAACAGTCAGAAGCGAGTTATGGCCCTCCTCCTCCCTTCAAGTCCTACCATACAAGCGGGTTTACCCGCGAATACGGTAGCGGCGGCAACGGTGAACGACTGGTGAGAAATGGCCAGCAGGCCCGGCCCTT                           <  4:179687/137‑1
                                                           GAACAGTCAGAAGCGAGTTATGGCCCTCCTCCTCCCTTCAAGTCCTACCATACAAGCGGGTTTACCCGCGAATACGGTAGCGGCGGCAACGGTGAACGACTGGTGAGAAATGGCCAGCAGGCCCGGCCCTTTCGCGG                     >  7:306644/1‑137
                                                           GAACAGTCAGAAGCGAGTTATGGCCCTCCTCCTCCCTTCAAGTCCTACCATACAAGCGGGTTTACCCGCGAATACGGTAGCGGCGGCAACGGTGAACGACTGGTGAGAAATGGCCAGCAGGCCCGGCCCTTTCGCGG                     >  4:336209/1‑137
                                                           GAACAGTCAGAAGCGAGTTATGGCCCTCCTCCTCCCTTCAAGTCCTACCATACAAGCGGGTTTACCCGCGAATACGGTAGCGGCGGCAACGGTGAACGACTGGTGAGAAATGGCCAGCAGGCCCGGCCCTTTCGCGG                     >  5:436775/1‑137
                                                           GAACAGTCAGAAGCGAGTTATGGCCCTCCTCCTCCCTTCAAGTCCTACCATACAAGCGGGTTTACCCGCGAATACGGTAGCGGCGGCAACGGTGAACGACTGGTGAGAAATGGCCAGCAGGCCCGGCCCTTTCGCGG                     >  6:210747/1‑137
                                                           GAACAGTCAGAAGCGAGTTATGGCCCTCCTCCTCCCTTCAAGTCCTACCATACAAGCGGGTTTACCCGCGAATACGGTAGCGGCGGCAACGGTGAACGACTGGTGAGAAATGGCCAGCAGGCCCGGCCCTTTCGCGG                     >  5:352297/1‑137
                                                           GAACAGTCAGAAGCGAGTTATGGCCCTCCTCCTCCCTTCAAGTCCTACCATACAAGCGGGTTTACCCGCGAATACGGTAGCGGCGGCAACGGTGAACGACTGGTGAGAAATGGCCAGCAGGCCCGGCCCTTTCGCGG                     >  5:188520/1‑137
                                                           GAACAGTCAGAAGCGAGTTATGGCCCTCCTCCTCCCTTCAAGTCCTACCATACAAGCGGGTTTACCCGCGAATACGGTAGCGGCGGCAACGGTGAACGACTGGTGAGAAATGGCCAGCAGGCCCGGCCCTTTCGCGG                     >  4:163102/1‑137
                                                           GAACAGTCAGAAGCGAGTTATGGCCCTCCTCCTCCCTTCAAGTCCTACCATACAAGCGGGTTTACCCGCGAATACGGTAGCGGCGG                                                                        <  4:291577/86‑1
                                                           GAACAGTCAGAAGCGAGTTATGGCCCTCCTCCTCCCTTCAAGTCCTACCATACAAGCGGGTTTACCCGCGAATACGGTAGCGGCGG                                                                        >  3:291577/1‑86
                                                           GAACAGTCAGAAGCGAGTTATGGCCCTCCTCCTCCCTTCAAGTCCTACAATACAAGCGGGTTTACCCGCGAATACGGTAGCGGCGGCAACGGTGAACGACTGGTGAGAAATGGCCCGCAGGCCCGGCCCTTTCGCGG                     >  6:285684/1‑137
                                                               aggCAGAAGCGAGTTATGGCCCTCCTCCTCCCTTCAAGTCCTACCATCCAAGCGGGTTTACCCGCGAATACGGTAGCGGCGGCAACGGTGAACGACTGGTGAGAAATGGCCAGCAGGCCCGGCCCTTTCGCGGGTAA                 <  8:349355/134‑1
                                                                GTCAGAAGCGAGTTATGGCCCTCCTCCTCCCTTCAAGTCCTACCATACAAGCGGGTTTACCCGCGAATACGGTAGCGGCGGCAACGGTGAACGACTGGTGAGAAATGGCCAGCAGGCCCGGCCCTTTCGCGGGTAAA                >  8:305317/1‑137
                                                                GTCAGAAGCGAGTTATGGCCCTCCTCCTCCCTTCAAGTCCTACCATACAAGCGGGTTTACCCGCGAATACGGTAGCGGCGGCAACGGTGAACGACTGGTGAGAAATGGCCAGCAGGCCCGGCCCTTTCGCGGGTAAA                >  4:55632/1‑137
                                                                GTCAGAAGCGAGTTATGGCCCTCCTCCTCCCTTCAAGTCCTACCATACAAGCGGGTTTACCCGCGAATACGGTAGCGGCGGCAACGGTGAACGACTGGTGAGAAATGGCCAGCAGGCCCGGCCCTTTCGCGGGTAAA                >  2:331615/1‑137
                                                                GTCAGAAGCGAGTTATGGCCCTCCTCCTCCCTTCAAGTCCTACCATACAAGCGGGTTTACCCGCGAATACGGTAGCGGCGGCAACGGTGAACGACTGGTGAGAAATGGCCAGCAGGCCCGGCCCTTTCGCGGGTAAA                >  8:142858/1‑137
                                                                 tccgacGCGTGTTCTGGCCCTCCTCCTCCGTTCAAGTCCTACCATACAAGCGGGTTTACCCGCTAATACGGTAGCGGCGGCAACGGTGAACGACTGGTGAGAAATGGCCAGCAGGCCCGGCCCTTTCGCGGGTAAAC               <  6:248211/131‑1
                                                                   AGAAGCGAGTTATGGCCCTCCTCCTCCCTTCAAGTCCTACCATACAAGCGGGTTTACCCGGGAATACGGTAGCGGCGGCAACGGTGAACGACTGGTGAGAAATGGCCAGCAGGCCCGGCCCTTTCGCGGGTAAACCC             <  8:183988/137‑1
                                                                    gacGCGAGTTATGGCCCTCCTCCGCCGTTCAAGTCCTACCATTCAAGGGGGTTTACCCGGGAATACGGTAGCGGCGGCAACGGTGAACGACTGGTGAGAAATGGCCAGCAGGCCCGGCCCTTTCGCGGGTAAACCCG            <  7:98208/134‑1
                                                                        gcatTTATGGCCCTCCTCTTCCCTTCAACGCCTACCATACACGCGGGTTTACCGGCGAATACGGTAGCGGCGGCAACGGTGAACGACTGGTGAGAAATGGCCAGCAGGCCCGGCCCTTTCGCGGGTAAACCCGCTCC        <  1:409407/133‑1
                                                                        gGAGTTATGCCCCTCCTCCGCCCTTCAAGTCCTACCATACAAGCGGGTTAACCCGCGAATACGGTAGCGGCGGCAACGGTGAACGACTGGTGAGAAATGGCCAGCAGGCCCGGCCCTTTCGCGGGTAAACCCGCTCC        <  7:102672/136‑1
                                                                        CGAGTTATGGCCCTCCTCCTCCCTTCAAGTCCTACCATACCAGCGGGTTTACCCGCGAATACGGTAGCGGCGGCAACGGTGAACGACTGGTGAGAAATGGCCAGCAGGCCCGGCCCTTTCGCGGGTAAACCCGCTCC        <  2:356495/137‑1
                                                                        CGAGTTATGGCCCTCCTCCTCCCTTCAAGTCCTACCATACAAGCGGGTTTACCCGCGAATACGGTAGCGGCGGCAACGGTGAACGACTGGTGAGAAATGGCCAGCAGGCCCGGCCCTTTCGCGGGTAAACCCGCTCC        <  4:439275/137‑1
                                                                        CGAGTTATGGCCCTCCTCCTCCCTTCAAGTCCAACCATACAAGCGGGTTTACCCGCGAATACGGTAGCGGCGGCAACGGTGAACGACTGGTGAGAAATGGCCAGCAGGCCCGGCCCTTTCGCGGGTAAACCCGCTCC        <  8:90709/137‑1
                                                                        CGAGTTATGGCCCACCACCTCCCTTCAAGTCCTACCATCCAAGCGGGTTTACCCGCGAATACGGTAGCGGCGGCAACGGTGAACGACTGGTGAGAAATGGCCAGCAGGCCCGGCCCTTTCGCGGGTAAACCCGCTCC        <  1:402925/137‑1
                                                                            TTATGGCCCTCCTCCTCCCTTCAAGTCCTACCATACAAGCGGGTTTACCCGCGAATACGGTAGCGGCGGCAACGGTGAACGACTGGTGAGAAATGGCCAGCAGGCCCGGCCCTTTCGCGGGTACACCCGCTCCTACG    >  2:450993/1‑137
                                                                             tcTGGCCCCCCTCCGCCCTTCAAGTCCTACAATCCACGCGGGTTAACCCGCGAATACGGTAGCGGCGGCAACGGTGAACGACTGGTGAGAAATGGCCAGCAGGCCCGGCCCTTTCGCGGGTAAACCCGCTCCTACGG   <  2:210631/135‑1
                                                                             TATGGCCCTCCTCGTCCCTTCAAGTCCAAGCATACATGTGGGTTTACCCGCGAATACGGTAGCGGCGGCAACGGTCAACGACTGGTGAGAAATGGCCAGCAGGCCCGGCCCTTTCGCGGGTAAACCCGCTCCTACGG   <  5:277423/137‑1
                                                                             TATGGCCCTCCTCCTCCCTTCAATTCCTACCATACAAGCGGGTTTACCCGCGAATACGGTAGCGGCGGCAACGGTGAACGACTGGTGAGAAATGGCCAGCAGGCCCGGCCCTTTCGCGGGTAAACCCGCTCCTACGG   <  2:404009/137‑1
                                                                             TATGGCCCTCCTCCTCCCTTCAAGTCCTACCATACAAGCGTGTTTACCCGCGAATACGGTAGCGGCGGCAACGGTGAACGACTGGTGAGAAATGGCCAGCAGGCCCGGCCCTTTCGCGGGTAAACCCGCTCCTACGG   <  4:157954/137‑1
                                                                             TATGGCCCTCCTCCTCCCTTCAAGTCCTACCATACAAGCGGGTTTACCCGCGAATACGGTAGCGGCGGCAACGGTGAACGACTGGTGAGAAATGGCCAGCAGGCCCGGCCCTTTCGCGGGTAAACCCGCTCCTACGG   <  6:436775/137‑1
                                                                             TATGGCCCTCCTCCTCCCTTCAAGTCCTACCATACAAGCGGGTTTACCCGCGAATACGGTAGCGGCGGCAACGGTGAACGACTGGTGAGAAATGGCCAGCAGGCCCGGCCCTTTCGCGGGTAAACCCGCTCCTACGG   <  3:55632/137‑1
                                                                             TATGGCCCTCCTCCTCCCTTCAAGTCCTACCATACAAGCGGGTTTACCCGCGAATACGGTAGCGGCGGCAACGGTGAACGACTGGTGAGAAATGGCCAGCAGGCCCGGCCCTTTCGCGGGTAAACCCGCTCCTACGG   <  3:163102/137‑1
                                                                             TATGGCCCTCCTCCTCCCTTCAAGTCCTACAATACAAGCGGGTTTACCCGCGAATACGGTAGCGGCGGCAACGGTGAACGACTGGTGAGAAATGGCCAGCAGGCCCGGCCCTTTCGCGGGTAAACCCGCTCCTACGG   <  4:424373/137‑1
                                                                             TATGGCCCTCCTCCTCCCTTAAAGTCCTACCATACAAGCGGGTTTACCCGCGAATACGGTAGCGGCGGCAACGGTGAACGACTGGTGAGAAATGGCCAGCAGGCCCGGCCCTTTCGCGGGTAAACCCGCTCCTACGG   <  5:413565/137‑1
                                                                              ATGGCCCTCCTCCTCCCTTCAAGTCCTACCATACAAGCGGGTTTACCCGCGAATACGGTAGCGGCGGCAACGGTGAACGACTGGTGAGAAATGGCCAGCAGGCCCGGCCCTTTCGCGTGTAAACCCGCTCCTACGGG  >  5:186305/1‑137
                                                                                                                                   TACGGTAGCGGCGGCAACGGTGAACGACTGGTGAGAAATGGCCAGCAGGCCCGGCCCTTTCGCGGGTAAACCCGCTCCTACGG   >  2:60455/1‑83
                                                                                                                                   TACGGTAGCGGCGGCAACGGTGAACGACTGGTGAGAAATGGCCAGCAGGCCCGGCCCTTTCGCGGGTAAACCCGCTCCTACGG   <  1:60455/83‑1
                                                                                                                                           CGGCGGCAACGGTGAACGACTGGTGAGAAATGGCCAGCAGGCCCGGCCCTTTCGCGGGTAAACCCGCTCCT       <  5:423549/71‑1
                                                                                                                                           CGGCGGCAACGGTGAACGACTGGTGAGAAATGGCCAGCAGGCCCGGCCCTTTCGCGGGTAAACCCGCTCCT       >  6:423549/1‑71
                                                                                                                                   ||||||||||||||||||||||||||||||||||||||||||||                                        
TATCGGCGCTTGGGTGTTGAAAGGAGGAGGGGTGATTTCTCCTACGGTCTGTACTGCGCGAACAGTCAGAAGCGAGTTATGGCCCTCCTCCTCCCTTCAAGTCCTACCATACAAGCGGGTTTACCCGCGAA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  KT2440/3965551‑3965421
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑GCAGGCCCGGCCCTTTCGCGGGTAAACCCGCTCCTACGGG  >  KT2440/5821636‑5821675

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.