Read alignment evidence... | |||||||||||
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seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
* | KT2440 | 5,361,641 | 0 | A | C | 30.4% | 84.8 / 10.6 | 69 | R145R (CGT→CGG) | CJ019_05046 | hypothetical protein |
Reads supporting (aligned to +/- strand): ref base A (44/4); new base C (1/20); total (45/24) | |||||||||||
Fisher's exact test for biased strand distribution p-value = 1.78e-12 | |||||||||||
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Rejected as consensus: Frequency below/above cutoff threshold. |
AAGGCCGGCCGTGCCGAGCTGGTGCAGACCATCGGCAAGAAAGCCCTGATCTACCGCAAGAACCCACAGCCGAACAAGCAGCTGTCCAACATCCACCGTTACAAGTAACGGT‑AGCTCCGATCAGTGGCGCGGTGAACGCGCCCTGACCGGTACCGGCTGGGCCACCAGCACGATGCCGGAAAAGCCCAGCACCAGGAAGCAGAACATCTGCCAGCGCTCGCCCACGGAAATACCGTAGCGCAAGGTGTAATACCCCACGCAGGC > KT2440/5361506‑5361769 | aaGGCCGGCCGTGCCGAGCTGGTGCAGACCATCGGCAAGAAAGCCCTGATCTACCGCAAGAACCCACAGCCGAACAAGCAGCTGTCCAACATCCACCGTTACAAGTAACGGT‑AGCTCCGATCCGTGGCGCGGTGAAc > 8:401473/1‑137 (MQ=255) aaGGCCGGCCGTGCCGAGCTGGTGCAGACCATCGGCAAGAAAGCCCTGATCTACCGCAAGAACCCACAGCCGAACAAGCAGCTGTCCAACATCCACCGTTACAAGTAACGGT‑AGCTCCGATCAGTGGCGCGGTGAAc > 4:227794/1‑137 (MQ=255) ggccggccGTGCCGAGCTGGTGCAGACCATCGGCAAGAAAGCCCTGATCTACCGCAAGAACCCACAGCCGAACAAGCAGCTGTCCAACATCCACCGTTACAAGTAACGGT‑AGCTCCGATCAGTGGCGCGGTGAAcgc > 7:366136/1‑137 (MQ=255) cggccgTGCCGAGCTGGTGCAGACCATCGGCAAGAAAGCCCTGATCTACCGCAAGAACCCACAGCCGAACAAGCAGCTGTCCAACATCCACCGTTACAAGTAACGGT‑AGCTCCGATCAGTGGCGCGGTGAACGCGcc > 8:285300/1‑137 (MQ=255) gTGCCGAGCTGGTGCAGACCATCGGCAAGAAAGCCCTGATCTACCGCAAGAACCCACAGCCGAACAAGCAGCTGTCCATCATCCACCGTGACAAGTAACGGT‑AGCTCCGATCAGTGGCGCGGTGCACGCGCCCGGAc > 4:291533/1‑137 (MQ=255) gTGCCGAGCTGGTGCAGACCATCGGCAAGAAAGCCCTGATCTACCGCAAGAACCCACAGCCGAACAAGCAGCTGTCCAACATCCACCGTTACAAGTAACGGT‑AGCTCCGATCAGTGGCGCGGTGCACGCGCCCTGAc > 4:264761/1‑137 (MQ=255) gTGCCGAGCTGGTGCAGACCATCGGCAAGAAAGCCCTGATCTACCGCAAGAACCCACAGCCGAACAAGCAGCTGTCCAACATCCACCGTTACAAGTAACGGT‑AGCTCCGATCAGTGGCGCGGTGAACGCGCCCTGAc > 4:391244/1‑137 (MQ=255) gTGCCGAGCTGGTGCAGACCATCGGCAAGAAAGCCCTGATCTACCGCAAGAACCCACAGCCGAACAAGCAGCTGTCCAACATCCACCGTTACAAGTAACGGT‑AGCTCCGATCAGTGGCGCGGTGAACGCGCCCTGAc > 5:126132/1‑137 (MQ=255) gTGCCGAGCTGGTGCAGACCATCGGCAAGAAAGCCCTGATCTACCGCAAGAACCCACAGCCGAACAAGCAGCTGTCCAACATCCACCGTTACAAGTAACGGT‑AGCTCCGATCAGTGGCGCGGTGAACGCGCCCTGAc > 1:403141/1‑137 (MQ=255) gTGCCGAGCTGGTGCAGACCATCGGCAAGAAAGCCCTGATCTACCGCAAGAACCCACAGCCGAACAAGCAGCTGTCCAACATCCACCGTTACAAGTAACGGT‑AGCTCCGATCAGTGGCGCGGTGAACGCGCCCTGAc > 1:415035/1‑137 (MQ=255) gTGCCGAGCTGGTGCAGACCATCGGCAAGAAAGCCCTGATCTACCGCAAGAACCCACAGCCGAACAAGCAGCTGTCCAACATCCACCGTTACAAGTAACGGT‑AGCTCCGATCAGTGGCGCGGTGAACGCGCCCTGAc > 1:420933/1‑137 (MQ=255) gTGCCGAGCTGGTGCAGACCATCGGCAAGAAAGCCCTGATCTACCGCAAGAACCCACAGCCGAACAAGCAGCTGTCCAACATCCACCGTTACAAGTAACGGT‑AGCTCCGATCAGTGGCGCGGGGAACGCGCCCTGAc > 3:384198/1‑137 (MQ=255) cAGACCATCGGCAAGAAAGCCCTGATCTACCGCAAGAACCCACAGCCGAACAAGCAGCTGTCCAACATCCACCGTTACAAGTAACGGT‑AGCTCCGATCAGTGGCGCGGTGACCGCGCCCTGACCGGTACCGGCTggg > 1:145716/1‑137 (MQ=255) aTCGGCAAGAAAGCCCTGATCTACCGCAAGAACCCACAGCCGAACAAGCAGCTGTCCAACATCCACCGTTACAAGTAACGGT‑AGCTCCGATCAGTGGCGCGGTGAACGCGCCCTGACCGGTACCGGCTGGGccacca > 5:222079/1‑137 (MQ=255) gCAAGAAAGCCCTGATCTACCGCAAGAACCCACAGCCGAACAAGCAGCTGTCCAACATCCACCGTTACAAGTAACGGT‑AGCTCCGATCAGTGGCGCGGTGAACGCGCCCTGACCGGTACCGGCTGGGCCACCAGCAc > 1:308811/1‑137 (MQ=255) cAAGAAAGCCCTGATCTACCGCAAGAACCCACAGCCGAACAAGCAGCTGTCCAACATCCACCGTTACAAGTAACGGT‑AGCTCCGATCAGTGGCGCGGTGAACGCGCCCTGACCGGTACCGGCTGGGCCACCAGCAcc > 5:351565/1‑136 (MQ=255) cAAGAAAGCCCTGATCTACCGCAAGAACCCACAGCCGAACAAGCAGCTGTCCAACATCCACCGTTACAAGTAACGGT‑AGCTCCGATCAGTGGCGCGGTGAACGCGCCCTGACCGGTACCGGCTGGGCCACCAGCAcc > 8:187088/1‑136 (MQ=255) cAAGAAAGCCCTGATCTACCGCAAGAACCCACAGCCGAACAAGCAGCTGTCCAACATCCACCGTTACAAGTAACGGT‑AGCTCCGATCAGTGGCGCGGTGAACGCGCCCTGACCGGTACCGGCTGGGCCACCAGCAcc > 1:108862/1‑136 (MQ=255) aaGCCCTGATCTACCGCAAGAACCCACAGCCGAACAAGCAGCTGTCCAACATCCACCGTTACAAGTAACGGT‑AGCTCCGATCAGTGGCGCGGTGAACGCGCCCTGACCGGTACCGGCTGGGCCACCAGCACCATGcc > 8:180379/1‑137 (MQ=255) cccccTGAACAACCGCAAGACCCCCCCCCCGACCAACCCGCTCTCCAACACCCCCCGTTACAAGTACGGGT‑AGCTCCGCGCGGGGGCGGGGTCACCGCGCCCTGACCGGTACCGGCTGGGCCACCAGCACGATGCCg < 8:392807/135‑1 (MQ=255) gCCCTGATCTACCGCAAGAACCCACAGCCGAACAAGCAGCTGTCCAACATCCACCGTTACAAGTAACGGT‑AGCTCCGATCAGTGGCGCGGTGAACGCGCCCTGACCGGTACCGGCTGGGCCACCAGCACGATGCCgg > 2:119060/1‑137 (MQ=255) tGATCTACCGCAAGAACCCACAGCCGAACAAGCAGCTGTCCAACATCCACTGTTACAAGTAACGGT‑AGCTCCGATCAGTGGCGCGGTGAACGCGCCCTGACCGGTACCGGCTGGGCCACCAGCACGATGCCGGaaaa > 4:295510/1‑137 (MQ=255) catgAACCCACAGCCGAACACGCAGCTTTCAAAAAACCACCTTTACAAGTAACGTT‑TGCTCCGAGCTTGGGCGGGGTGACCGCGCCCTGACCGGTACCGGCTGGGCCACCAGCACGATGCCGGAAAAGCCCAGCAcc < 2:62199/134‑1 (MQ=255) aaGAACCCACAGCCGAACAAGCAGCTGTCCAACATCCACCGTTACAAGTAACGGT‑AGCTCCGATCAGTGGCGCGGTGAACGCGCCCTGACCGGTACCGGCTGGGCCACCAGCACGATGCCGGAAAAGCCCAGCACCa > 3:337987/1‑137 (MQ=255) gAACCCACAGCCGAACAAGCAGCTGTCCAACATCCACCGTTACAAGTAACGGT‑AGCTCCGATCAGTGGCGCGGTGAACGCGCCCTGACCGGTACCGGCTGGGCCACCAGCACGATGCCGGAAAAGCCCAGCACCAgg > 1:62199/1‑137 (MQ=255) ccccACACCCCAACAAGCCGCTTACCAACAACCCCCGTAACAAGTACCGGT‑AGCTCCGATCTGGGGCGCGGTCACCGCCCCCTGACCGGTACCGGCTGGGCCACCAGCACGATGCCGGAAAAGCCCAGCACCAGGaa < 7:285300/136‑1 (MQ=255) caGCCGAACAAGCAGCTGTCCAACAACCACCGTTACAAGTAACGTT‑AGCTCCGATCAGGGGCGCGGTGACCGCGCCCTGACCGGTACCGGCTGGGCCACCAGCACGATGCCGGAAAAGCCCAGCACCAGGAAGCAGa < 7:376406/137‑1 (MQ=255) cGAACAAGCAGCTGTCCAACATCCACCGTTACAAGTAACGGT‑AGCTCCGATCAGTGGCGCGGTGAACGCGCCCTGACCGGTACCGGCTGGGCCACCAGCACGATGCCGGAAAAGCCCAGCACCAGGAAGCAGAACaa > 7:114175/1‑136 (MQ=255) aaCAAGCAGCTGTCCAACATCCACCGTTACAAGTAACGGT‑AGCTCCGATCAGTGGCGCGGTGAACGCGCCCTGACCGGTACCGGCTGGGCCACCAGCACGATGCCGGAAAAGCCCAGCACCAGGAAGCAGAACATCt > 4:392336/1‑137 (MQ=255) ccaccTGTCAAACATCCACCTTTAAAAGTACGGGT‑AGCTCCGATCTGGGGCGCGGTCAACGCGCCCTGACCGGTACCGGCTGGGCCACCAGCACGATGCCGGAAAAGCCCAGCACCAGGAAGCAGAACATCTGCCAg < 2:403141/133‑1 (MQ=255) accAACACCCACCTTTAAAAGTACGGGT‑AGCTCCGAGCTGGGGCGCGGGGACCGCGCCCTGACCGGTACCGGCTGGGCCACCAGCACGATGCCGGAAAAGCCCAGCACCAGGAAGCAGAACATCTGCCAGCGCTCGc < 8:291705/136‑1 (MQ=255) aaTCCACCGTAACAAGTAACGGT‑AGCTCCGATCTGGGGCGCGGTGACCGCGCCCTGACCGGTACCGGCTGGGCCACCAGCACGATGCCGGAAAAGCCCAGCACCAGGAAGCAGAACATCTGCCAGCGCTCGCCCACg < 4:337987/136‑1 (MQ=255) aCCGTTACAAGTAACGGT‑AGCTCCGATCAGTGGCGCGGTGAACGCGCCCTGACCGGTACCGGCTGGGCCACCAGCACGATGCCGGAAAAGCCCAGCACCAGGAAGCAGAACATCTGCCAGCGCTCGCCCACGGAAAt > 4:281920/1‑137 (MQ=255) ccGTTACACGTAACGGT‑AGCTCCGATCAGGGGCGCGGTGACCGCGCCCTGACCGGTACCGGCTGGGCCACCAGCACGATGCCGGAAAAGCCCAGCACCAGGAAGCAGAACATCTGCCAGCGCTCGCCCACGGAAATa < 8:366136/137‑1 (MQ=255) tttACAAGTAACGGT‑TGCTCCGTGCAGTGGCGCGGTCACCGGCCCCTGACCGGTACCGGCTGGGCCACCAGCACGATGCCGGAAAAGCCCAGCACCAGGAAGCAGAACATCTGCCAGCGCTCGCCCACGGAAATAcc < 4:384198/136‑1 (MQ=255) gTTACAAGTAACGGT‑AGCTCCGATCAGTGGCGCGGTGAACGCGCCCTGACCGGTACCGGCTGGGCCACCAGCACGATGCCGGAAAAGCCCAGCACCAGGAAGCAGAACATCTGCCAGCGCTCGCCCACGGAAATAcc > 7:364010/1‑137 (MQ=255) atgTAACGTT‑AGCTCCGATCCGGGGCGCGGTCACCGCCCCCTGACCGGTACCGGCTGGGCCACCAGCACGATGCCGGAAAAGCCCAGCACCAGGAAGCAGAACATCTGCCAGCGCTCGCCCACGGAAATACCGTAgc < 3:401201/135‑1 (MQ=255) aggTACCGTT‑AGCTCGGATCGGTGGCGGGGTCACCCGCCCCTGACCGGTACCGGCTGGGCCACCAGCACGATGCCGGAAAAGCCCAGCACCAGGAAGCAGAACATCTGCCAGCGCTCGCCCACGGAAATACCGTAgc < 5:321637/135‑1 (MQ=255) acgTACCGGT‑TGCTCCGAGCGGGGGCGCGTGTCCCGCGCCCTGACCGGTACCGGCTGGGCCACCAGCACGATGCCGGAAAAGCCCAGCACCAGGAAGCAGAACATCTGCCAGCGCTCGCCCACGGAAATACCGTAgc < 4:53720/135‑1 (MQ=255) aattaccGGT‑CGCTCAGATCTGGGGCGGGGTCACCCCGCCCTGACCGGTACCGGCTGGGCCACCAGCACGATGCCGGAAAAGCCCAGCACCAGGAAGCAGAACATCTGCCAGCGCTCGCCCACGGAAATACCGTAgc < 2:232207/131‑1 (MQ=255) aattaccGGT‑AGCTCCGATCCGTGGCGCGGTGACCGCGCCCTGACCGGTACCGGCTGGGCCACCAGCACGATGCCGGAAAAGCCCAGCACCAGGAAGCAGAACATCTGCCAGCGCTCGCCCACGGAAATACCGTAgc < 7:83097/131‑1 (MQ=255) aagaaccGGT‑AGCACCGATCAGTGGCGCGGTGACCGCGCCCTGACCGGTACCGGCTGGGCCACCAGCACGATGCCGGAAAAGCCCAGCACCAGGAAGCAGAACATCTGCCAGCGCTCGCCCACGGAAATACCGTAgc < 4:47155/131‑1 (MQ=255) aaGTAACGGT‑AGCTCCGATCAGTGGCGCGGTGAACGCGCCCTGACCGGTACCGGCTGGGCCACCAGCACGATGCCGGAAAAGCCCAGCACCAGGAAGCAGAACATCTGCCAGCGCTCGCCCACGGAAATACCGTAgc < 2:420933/137‑1 (MQ=255) aaGTAACGGT‑AGCTCCGATCAGTGGCGCGGTGAACGCGCCCTGACCGGTACCGGCTGGGCCACCAGCACGATGCCGGAAAAGCCCAGCACCAGGAAGCAGAACATCTGCCAGCGCTCGCCCACGGAAATACCGTAgc < 8:364010/137‑1 (MQ=255) aaGAAACGTT‑AGAGCCTATCTGGGGCGCGGGCCCCGCCCCCTGACCGGTACCGGCTGGGCCACCAGCACGATGCCGGAAAAGCCCAGCACCAGGAAGCAGAACATCTGCCAGCGCTCGCCCACGGAAATACCGTAgc < 3:264761/137‑1 (MQ=255) aaGAAACGGT‑AGCTCCGAGCCGGGGCGCGGTCACCGCGCCCTGACCGGTACCGGCTGGGCCACCAGCACGATGCCGGAAAAGCCCAGCACCAGGAAGCAGAACATCTGCCAGCGCTCGCCCACGGAAATACCGTAgc < 2:145716/137‑1 (MQ=255) aagtaCGGTAAGCCCCTATCCGGGGCGCGGTCACCCCCCCCTGACCGGTACCGGCTGGGCCACCAGCACGATGCCGGAAAAGCCCAGCACCAGGAAGCAGAACATCTGCCAGCGCTCGCCCACGGAAATACCGTAgc < 5:54842/133‑1 (MQ=255) aGTAACGGT‑AGCTCCGATCAGTGGCGCGGTGAACGCGCCCTGACCGGTACCGGCTGGGCCACCAGCACGATGCCGGAAAAGCCCAGCACCAGGAAGCAGAACATCTGCCAGCGCTCGCCCACGGAAATACCGTAgcg > 8:451855/1‑137 (MQ=255) ttAAGGGT‑AGCTCCGAGCAGGGGCGCGGTGAACGCCCCCTGACCGGTACCGGCTGGGCCACCAGCACGATGCCGGAAAAGCCCAGCACCAGGAAGCAGAACATCTGCCAGCGCTCGCCCACGGAAATACCGTAgcgc < 7:187088/136‑1 (MQ=255) ttAACTGT‑AGCTCCGATCAGTGGCGCGGTCACCCCGCCCTGACCGGTACCGGCTGGGCCACCAGCACGATGCCGGAAAAGCCCAGCACCAGGAAGCAGAACATCTGCCAGCGCTCGCCCACGGAAATACCGTAgcgc < 2:415035/136‑1 (MQ=255) ttAACGGT‑AGCTCCGATCAGGGGCGCGGTTACCGCGCCCTGACCGGTACCGGCTGGGCCACCAGCACGATGCCGGAAAAGCCCAGCACCAGGAAGCAGAACATCTGCCAGCGCTCGCCCACGGAAATACCGTAgcgc < 8:114175/136‑1 (MQ=255) gTAACGGT‑AGCTCCGATCAGTGGCGCGGTGAACGCGCCCTGACCGGTACCGGCTGGGCCACCAGCACGATGCCGGAAAAGCCCAGCACCAGGAAGCAGAACATCTGCCAGCGCTCGCCCACGGAAATACCGTAgcgc > 1:195051/1‑137 (MQ=255) aCGGT‑AGCTCCGATCAGTGGCGCGGTGAACGCGCCCTGACCGGTACCGGCTGGGCCACCAGCACGATGCCGGAAAAGCCCAGCACCAGGAAGCAGAACATCTGCCAGCGCTCGCCCACGGAAATACCGTAGCGCAAg > 1:77313/1‑137 (MQ=255) ggT‑AGCTCCGATCTGGGGCGCGGTCACCGCGCCCTGACCGGTACCGGCTGGGCCACCAGCACGATGCCGGAAAAGCCCAGCACCAGGAAGCAGAACATCTGCCAGCGCTCGCCCACGGAAATACCGTAGCGCAAGgt < 1:12595/137‑1 (MQ=255) ggT‑AGCTCCGATCAGTGGCGCGGTGAACGCGCCCTGACCGGTACCGGCTGGGCCCCCAGCACGATGCCGGAAAAGCCCAGCACCAGGAAGCAGCACATCTGCCAGCGCTCGCCCACGGAAATACCGTAGCGCAAGgt > 6:47261/1‑137 (MQ=255) ggT‑AGCTCCGATCAGTGGCGCGGTGAACGCGCCCTGACCGGTACCGGCTGGGCCACCAGCACGATGCCGGAAAAGCCCAGCACCAGGAAGCAGAACATCTGCCAGCGCTCGCCCACGGAAATACCGTAGCGCAAggg > 1:232207/1‑136 (MQ=255) t‑AGCTCCGATCAGTGGCGCGGTGAACGCGCCCTGACCGGTACCGGCTGGGCCACCAGCACGATGCCGGAAAAGCCCAGCACCAGGAAGCAGAACATCTGCCAGCGCTCGCCCACGGAAATACCGTAGCGCAAGgtgt > 1:242916/1‑137 (MQ=255) t‑AGCTCCGATCAGTGGCGCGGTGAACGCGCCCTGACCGGTACCGGCTGGGCCACCAGCACGATGCCGGAAAAGCCCAGCACCAGGAAGCAGAACATCTGCCAGCGCTCGCCCACGGAAATACCGTAGCGCAAGgtgt > 3:55649/1‑137 (MQ=255) t‑AGCTCCGATCAGTGGCGCGGTGAACGCGCCCTGACCGGTACCGGCTGGGCCACCAGAACGATGCCGGTAACGCCCAGCACCAGGACGAAGCACATCTGCCAGCGCTCGCCCACGGAAATCCCGAAGCGCAAGgtgt > 6:95025/1‑137 (MQ=255) cGATCAGTGGCGCGGTGAACGCGCCCTGACCGGTACCGGCTGGGCCACCAGCACGATGCCGGAAAAGCCCAGCACCAGGAAGCAGCACATCTGCCAGCGCTCGCCCACGGAAATACCGTAGCGCAAGGTGTAATAcc > 1:315793/1‑137 (MQ=255) cGATCAGTGGCGCGGTGAACGCGCCCTGACCGGTACCGGCTGGGCCACCAGCACGATGCCGGAAAAGCCCAGCACCAGGAAGCAGAACATCTGCCAGCGCTCGCCCACGGAAATACCGTAGCGCAAGGTGTAATAcc > 3:324270/1‑137 (MQ=255) cGATCAGTGGCGCGGTGAACGCGCCCTGACCGGTACCGGCTGGGCCACCAGCACGATGCCGGAAAAGCCCAGCACCAGGAAGCAGAACATCTGCCAGCGCTCGCCCACGGAAATACCGTAGCGCAAGGTGTAATAcc > 7:3598/1‑137 (MQ=255) cGATCAGTGGCGCGGTGAACGCGCCCTGACCGGTACCGGCTGGGCCACCAGCACGATGCCGGAAAAGCCCAGCACCAGGAAGCAGAACATCTGCCAGCGCTCGCCCACGGAAATACCGTAGCGCAAGGTGTAATAcc > 5:100423/1‑137 (MQ=255) aGTGGCGCGGTGAACGCGCCCTGCCCGGTACCGGCTGGGCCACCAGCACGATGCCGGAAAAGCCCAGCACCAGGAAGCAGAACATCTGCCAGCGCTCGCCCACGGAAATACCGTAGCGCAAGGTGTAATACCCCCCg > 4:385832/1‑137 (MQ=255) aGTGGCGCGGTGAACGCGCCCTGACCGGTACCGGCTGGGCCCCCAGCACGATGCCGGAAAAGCCCAGCACCAGGAAGCAGAACATCTGCCAGCGCTCGCCCACGGAAATACCGTAGCGCAAGGTGTAATACCCCAcc > 3:150496/1‑136 (MQ=255) aGTGGCGCGGTGAACGCGCCCTGACCGGTACCGGCTGGGCCACCAGCACGATGCCGGAAAAGCCCAGCACCAGGAAGCAGAACATCTGCCAGCGCTCGCCCACGGAAATACCGTAGCGCAAGGTGTAATACCCCAcc > 4:111974/1‑136 (MQ=255) aGTGGCGCGGTGAACGCGCCCTGACCGGTACCGGCTGGGCCACCAGCACGATGCCGGAAAAGCCCAGCACCAGGAAGCAGAACATCTGCCAGCGCTCGCCCACGGAAATACCGTAGCGCAAGGTGTAATACCCCACg > 1:337032/1‑137 (MQ=255) aGTGGCGCGGTGAACGCGCCCGGACCGGTACCGGCTGGGCCGCCAGCACGCTGCCGGAAAAGCCCAGCACCAGGAAGCAGAACATCTGCCAGCGCTCGACCACCGAAATCCCGTAGCGCAAGGTGTAATACCCCAcc > 4:338923/1‑136 (MQ=255) cgcgGTGAACGCGCCCTGACCGGTACCGGCTGGGCCACCAGCACGATGCCGGAAAAGCCCAGCCCCAGGAAGCAGAACATCTGCCAGCGCTCGCCCACGGAAATACCGTAGCGCAAGGTGTAATACCCCACGCAGGc > 7:11917/1‑137 (MQ=255) | AAGGCCGGCCGTGCCGAGCTGGTGCAGACCATCGGCAAGAAAGCCCTGATCTACCGCAAGAACCCACAGCCGAACAAGCAGCTGTCCAACATCCACCGTTACAAGTAACGGT‑AGCTCCGATCAGTGGCGCGGTGAACGCGCCCTGACCGGTACCGGCTGGGCCACCAGCACGATGCCGGAAAAGCCCAGCACCAGGAAGCAGAACATCTGCCAGCGCTCGCCCACGGAAATACCGTAGCGCAAGGTGTAATACCCCACGCAGGC > KT2440/5361506‑5361769 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |