New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? KT2440 4918800 =0 (0.000)69 (1.120) 40/228 NT 100% coding (7/789 nt) soj_1 Sporulation initiation inhibitor protein Soj
?KT2440 = 5539492 NA (NA)intergenic (‑358/+71) CJ019_03622/rlmB IS110 family transposase ISPpu9/23S rRNA (guanosine‑2'‑O‑)‑methyltransferaseRlmB

CGCGGTGTATGGCACCGGTTGCACCGGTGTTCGCGGGTAAACCCGCTCCTACATTGATTGCGCGAGCTTTCGAATTTTGAGCAAGGCAGTGTCCCTGCCAAATCAATAGATAGAGTTTGCTTGATGAGAG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  KT2440/4918929‑4918800
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gagATCACCCAGCCCTTCCGGGCTGCGCTGTCGCACAGCAAACAGGATGCGCATGACGTCAGATCTGCACTGACATCGAGATCTAGAAAAGCATTCGCCGACTGATCCGGGTAGGTCAGCCGCCGAATACTTTGCTA  <  KT2440/5539492‑5539359
                                                                                                                                                                                                                                                                        
gGCGGTGTATGGAACCGGTTGCACGTGTGTTCGCGTGTAAACCCGCTCCTACATTGATTGCGCGAGCTTTCGAATTTTGAGCAAGGCAGTGTCCCTGCCAAATCAATAGATAGAGTTTGCTTGATGAGAGATCACC                                                                                                                                  <  7:152430/135‑1
 GCGGTGTATGGCACCGGTTGCACCGGTGTGCGCGGGAAAACCCGCTCCTACATTGATTGCGCGAGCTTTCGAATTTTGAGCAAGGCAGTGTCCCTGCCAAATCAATAGATAGAGTTTGCTTGATGAGAGATCACC                                                                                                                                  <  6:397500/135‑1
 GCGGTGTATGGCACCGGTGGCACCGGTGTGCGCGGGTAAACCCGCTCCTACATTGATTGCGCGAGCTTTCGAATTTTGAGCAAGGCAGTGTCCCTGCCAAATCAATAGATAGAGTTTGCTTGATGAGAGATCACC                                                                                                                                  <  6:366868/135‑1
                GGTTGCACCGGTGTTCGCGGGTAAACCCGCTCCTACATTGATTGCGCGAGCTTTCGAATTTTGAGCAAGGCAGTGTCCCTGCCCAATCAATAGAAAGAGTTTGCTTGATGAGAGATCACCCCCCCCTTCCGGGCTG                                                                                                                  >  8:214306/1‑136
                  TTGCACCGGTGTTCGCGGGTAAACCCGCTCCTACATTGATTGGGCGAGCTTTCGAATTTTGAGCAAGGCAGTGTCCCGGCCAAATCAATAGATAGAGTTTGCTTTATGAGAGCTCACCCAGCCCTTCCGGGCGGC                                                                                                                 >  6:451005/1‑135
                  TTGCACCGGTGTTCGCGGGTAAACCCGCTCCTACATTGATTGCGCGAGGTTTCGAATTTTGAGCAAGGCAGTGTCCCGGCCAAATCAATAGATAGAGTTTGCTTGATGAGAGATCACCCAGCCCTTCCGGGCTGCG                                                                                                                >  7:403907/1‑136
                  TTGCACCGGTGTTCGCGGGTAAACCCGCTCCTACATTGATTGCGCGAGCTTTCGAATTTTGAGCAAGGCAGTGTCCCTGCCAAATCAATAGATAGAGTTTGCTTGATGAGAGATCACCCAGCCCTTCCGGGCTGCG                                                                                                                >  7:244033/1‑136
                  TTGCACCGGTGTTCGCGGGTAAACCCGCTCCTACATTGATTGCGCGAGCTTTCGAATTTTGAGCAAGGCAGTGTCCCTGCCAAATCAATAGATAGAGTTTGCTTGATGAGAGATCACCCAGCCCTTCCGGGCTGC                                                                                                                 >  3:90600/1‑135
                  TTGCACCGGTGTTCGCGGGTAAACCCGCTCCTACATTGATTGCGCGAGCTTTCGAATTTTGAGCAAGGCAGTGTCCCTGCCAAATCAATAGATAGAGTTTGCTTGATGAGAGATCACCCAGCCCGTCCGGGCTGCG                                                                                                                >  7:15748/1‑136
                  TTGCACCGGTGTTCGCGGGTAAACCCGCTCCTACATTGATTGCGCGAGCTTTCGAATTTTGAGCAAGGCAGTGTCCCTGCCAAATCAATAGAAAGAGTTTGCTTGATGAGAGATCACCCAGCCCTTCCGGGCTGC                                                                                                                 >  6:406943/1‑135
                  TTGCACCGGTGTTCGCGGGTAAACCCGCTCCTACATTGATTGCGCGAGCGTTCGAATTTTGAGCAAGGCAGTGTCCCTGCCAAATCAATAGATAGAGTTTGCTTGATGAGAGATCACCCAGCCCTTCCGGGCTGC                                                                                                                 >  3:117631/1‑135
                    GCACCGGTGTTCGCGGGTAAACCCGCTCCTACATTGATTGCGCGAGCTTTCGAATTTTGAGCAAGGCAGTGTCCCTGCCAAATCAATAGATAGAGTTTGCTTGATGAGAGATCACCCAGCCCTTCCGGGCTGCGC                                                                                                               >  4:385640/1‑135
                    GCACCGGTGTTCGCGGGTAAACCCGCTCCTACATTGATTGCGCGAGCTTTCGAATTTTGAGCAAGGCAGTGTCCCTGCCAAATCAATAGATAGAGTTTGCTTGATGAGAGATCACCCAGCCCTTCCGGGCT                                                                                                                   >  4:88228/1‑131
                    GCACCGGTGTTCGCGGGTAAACCCGCTCCTACATTGATTGCGCGAGCTTTCGAATTTTGAGCAAGGCAGTGTCCCTGCCAAATCAATAGATAGAGTTTGCTTGATGAGAGATCACCCAGCCCTTCCGGGCT                                                                                                                   <  3:88228/131‑1
                    GCACCGGTGTTCGCGGGTAAACCCGCTCCTACAGTGATTGCGCGAGCTTTCGAATTTTGAGCAAGGCAGTGTCCCTGCCAAATCAATAGATAGAGTTTGCTTGATGAGAGATCACCCAGCCCTTCCGGGCTGCGC                                                                                                               >  3:273076/1‑135
                    GCACCGGTGTTCGCGGGTAAACCCGCGCCTACATTGATTGCGCGAGCTTTCGAATTTTGAGCAAGGCAGTGTCCCTGCCAAATCAATAGATAGAGTTTGCTTGATGAGAGATCACCCAGCCCTTCCGGGCTGCGC                                                                                                               >  1:144746/1‑135
                       CCGGTGTTCGCGGGTAAACCCGCTCCTACATTGATTGCGCGAGCTTTCGAATTTTGAGCAAGGCAGTGTCCCTGCCAAATCAATAGATAGAGTTTGCTTGATGAGAGATCACCCAGCCCTTCCGGGCTGCGCTGT                                                                                                            <  4:131981/135‑1
                           TGTTCGGGGGTAAACCCGCTCCTACATTGATTGCGCGAGCTTTCGAATTTTGAGCAAGGCAGTGTCCCTGCCAAATCAATAGATAGAGTTTGCTTGATGAGAGATCACCCAGCCCTTCCGGGCTGCGCTGTCGCA                                                                                                        <  4:403535/135‑1
                              TCGCGGGTAAACCCGCTCCTACATTGATTGCGCGAGCTTTCGAATTTTGAGCAAGGCAGTGTCCCTGCCAAATCAATAGATAGAGTTTGCTTGATGAGAGATCACCCAGCCCTTCCGGGCTGCGCTGTCGCACA                                                                                                      >  3:405477/1‑134
                               CGCGGGTAAACCCGCTCCTACATTGATTGCGCGAGCTTTCGAATTTTGAGCAAGGCAGTGTCCCTGCCAAATCAATAGATAGAGTTTGCTTGATGAGAGATCACCCAGCCCTTCCGGGCTGCGCTGTCGCACAG                                                                                                     >  1:106420/1‑134
                                     TAAACCCGCTCCTACATTGATTGCGCGAGCTTTAGAATTTTGAGCAAGGCAGTTTCCCTGCCAAATCAATAGATAGAGTTTGCTTGATGAGAGATCACCCAGCCCATCCGGGCTGCGCTGTCGCACAGCAAAaa                                                                                               >  5:106582/1‑132
                                        ACCCGCTCCTACATTGATTGCGCGAGCTTTCGAATTTTGAGCAAGGCAGTGTCCCTGCCAAATCAATAGATAGAGTTTGCTTGATGAGAGATCACCCAGCCCTTCCGGGCTGCGCTGTCGCACAGCAAACAGGAT                                                                                           <  6:140025/135‑1
                                           CGCTCCTACATTGATTGCGCGAGCTTTCGAATTTTGAGCAAGGCAGTGTCCCTGCCAAATCAATAGATAGAGTTTGCTTGATGAGAGATCACCCAGCCCTTCCGGGCTGCGCTGTCGCACAGCAAACAGGATGCG                                                                                        <  1:29468/135‑1
                                               CCTACATTGATTGCGCGAGCTTTCGAATTTTGAGCAAGGCAGTGTCCCTGCCAAATCAATAGATAGAGTTTGCTTGATGAGAGATCACCCAGCCCTTCCGGGCTGCGCTGTCGCACAGCAAACAGGATGCGCATG                                                                                    >  3:80480/1‑135
                                                 TACATTGATTGCGCGAGCTTTCGAATTTTGAGCAAGGCAGTGTCCCTGCCAAATCAATAGATAGAGTTTGCTTGATGAGAGATCACCCAGCCCTTCCGGGCTGCGCTGTCGCACAGCAAACAGGATGCGCATGAC                                                                                  >  6:24662/1‑135
                                                 TACATTGATTGCGCGAGCTTTCGAATTTTGAGCAAGGCAGTGTCCCTGCCAAATCAATAGATAGAGTTTGCTTGATGAGAGATCACCCAGCCCTTCCGGGCTGCGCTGTCGCACAGCAAACAGGATGCGCATGA                                                                                   <  6:418323/134‑1
                                                 TACATTGATTGCGCGAGCTTTCGAATTTTGAGCAAGGCAGTGTCCCTGCCAAATCAATAGATAGAGTTTGCTTGATGAGAGATCACCCAGCCCTTCCGGGCTGCGCTGTCGCACAGCAAACAGGATGCGCATGA                                                                                   <  4:90600/134‑1
                                                 TACATTGATTGCGCGAGCTTTCGAATTTTGAGCAAGGCAGTGTCCCTGCCAAATCAATAGATAGAGTTTGCTTGATGAGAGATCACCCAGCCCTTCCGGGCTGCGCTGTCGCACAGCAAACAGGATGCGCATGA                                                                                   <  2:106420/134‑1
                                                      TGATTGCGCGAGCTTTCGAATTTTGAGCAAGGCAGTGTCCCTGCCAATTCAATAGATAGAGTTTGCTTGATGAGAGATCACCCAGCCCTTCCGGGCTGCGCTGTCGCACAGCAAACAGGATGCGCATGACGT                                                                                >  8:261141/1‑132
                                                         ttcCGCGATCTTTCGAATTATGAGCAAGGCAGTGTCCCTGCCAAATCAATAGATAGAGTTTGCTTGATGAGAGATCACCCAGCCCATCCGGGCTGCGCTGTCGCACAGCAAACAGGATGCGCATGACGTCAGATCT                                                                         <  7:434113/133‑1
                                                           GCGCGAGCTTTCGAATTTTGAGCAAGGCAGTGTCCCTGCCAAATCAATAGATAGAGTTTGCTTGATGAGAGATCACCCAGCCCTTCCGGGCTGCGCTGTCGCACAGCACACAGGATGCGCATGACGTCAGATCTG                                                                        >  6:409821/1‑135
                                                           GCGCGAGCTTTCGAATTTTGAGCAAGGCAGTGTCCCTGCCAAATCAATAGATAGAGTTTGCTTGATGAGAGATCACCCAGCCCTTCCGGGCTGCGCTGTCGCACAGCAAACAGGATGCGCATGACGTCAGATCTG                                                                        >  7:207629/1‑135
                                                           GCGCGAGCTTTCGAATTTTGAGCAAGGCAGTGTCCCTGCCAAATCAATAGATAGAGTTTGCTTGATGAGAGATCACCCAGCCCTTCCGGGCTGCGCTGTCGCACAGCAAACAGGATGCG                                                                                        >  2:240390/1‑119
                                                           GCGCGAGCTTTCGAATTTTGAGCAAGGCAGTGTCCCTGCCAAATCAATAGATAGAGTTTGCTTGATGAGAGATCACCCAGCCCTTCCGGGCTGCGCTGTCGCACAGCAAACAGGATGCG                                                                                        <  1:240390/119‑1
                                                             GCGAGCTTTCGAATTTTGAGCAAGGCAGTGTCCCTGCCAAATCAATAGATAGAGTTTGCTTGATGAGAGATCACCCAGCCCTTCCGGGCTGCGCTGTCGCACAGCAAACAGGATGCGCATGACGTCAGATCTGCA                                                                      >  5:205730/1‑135
                                                             GCGAGCTTTCGAATTTTGAGCAAGGCAGTGTCCCTGCCAAATCAATAGATAGAGTTTGCTTGATGAGAGATCACCCAGCCCTTCCGGGCTGCGCTGTCGCACAGCAAACAGGATGCGCATGACGTCAGATCTGCA                                                                      >  5:403401/1‑135
                                                             GCGAGCTTTCGAATTTTGAGCAAGGCAGTGTCCCTGCCAAATCAATAGATAGAGTTTGCTTGATGAGAGATCACCCAGCCCTTCCGGGCTGCGCTGTCGCACAGCAAACAGGATGCGCATGACGTCAGATCTGCA                                                                      >  1:124262/1‑135
                                                             GCGAGCTTTCGAATTTTGAGCAAGGCAGTGTCCCTGCCAAATCAATAGATAGAGTTTGCTTGATGAGAGATCACCCAGCCCTTCCGGGCTGCGCTGTCGCACAGCAAACAGGATGCGCATGACGTCAGATCTGCA                                                                      >  1:140343/1‑135
                                                              CGAGCTTTCGAATTTTGAGCAAGGCAGTGTCCCTGCCAAATCAATAGATAGAGTTTGCTTGATGAGAGATCACCCAGCCCTTCCGGGCTGCGCTGTCGCACAGCAAACAGGATGCG                                                                                        >  1:283705/1‑116
                                                              CGAGCTTTCGAATTTTGAGCAAGGCAGTGTCCCTGCCAAATCAATAGATAGAGTTTGCTTGATGAGAGATCACCCAGCCCTTCCGGGCTGCGCTGTCGCACAGCAAACAGGATGCG                                                                                        <  2:283705/116‑1
                                                                   TTTCGAATTTTGAGCAAGGCAGTGTCCCTGCCAAATCAATAGATAGAGTTTGCTTGATGAGAGATCACCCAGCCCTTCCGGGCTGCGCTGTCGCACAGCAAACAGGATGCGCATGACGTCAGATCTGCACTGACA                                                                <  3:38262/135‑1
                                                                               AGCAAGGCAGTGTCCCTGCCAAATCAATAGATAGAGTTTGCTTGATGAGAGAGCACCCAGCCCTTCCGGGCTGCGCTGTCGCACAGCAAACAGGATGCGCATGACGTCAGATCTGCACTGACATCGAGATCTAGAA                                                   <  8:409392/136‑1
                                                                                GCAAGGCAGTGTCCCTGCCAAATCAATAGATAGAGTTTGCTTGATGAGAGATCACCCAGCCCTTCCGGGCTGCGCTGTCGCACAGCAAACAGGATGCGCATGACGTCAGATCTGCACTGACATCGAGATCTAGAA                                                   >  7:339001/1‑135
                                                                                  AAGGCAGTGTCCCTGCCAAATCAATAGATAGAGTTTGCTTGATGAGAGATCACCCAGCCCTTCCGGGCTGCGCTGTCGCACAGCAAACAGGATGCGCATGACGTCAGATCTGCACTGACATCGAGATCTAGAAAAG                                                >  8:165394/1‑136
                                                                                  AAGGCAGTGTCCCTGCCAAATCAATAGATAGAGTTTGCTTGATGAGAGATCACCCAGCCCTTCCGGGCTGCGCTGTCGCACAGCAAACAGGATGCGCATGACGTCAGATCTGCACTGACATCGAGATCTAGAA                                                   >  1:166866/1‑133
                                                                                  AAGGCAGTGTCCCTGCCAAATCAATAGATAGAGTTTGCTTGATGAGAGATCACCCAGCCCTTCCGGGCTGCGCTGTCGCACAGCAAACAGGATGCGCATGACGTCAGATCTGCACTGACATCGAGATCTAGAA                                                   <  2:166866/133‑1
                                                                                          GTCCCTGCCAAATCAATAGATAGAGTTTGCTTGATGAGAGATCACCCAGCCCTTCCGGGCTGCGCTGTCGCACAGCAAACAGGATGCGCATGACGTCAGATCTGCACTGACATCGAGATCTAGAAAAGCATTCGC                                         <  2:144746/135‑1
                                                                                            CCCTGCCAAATCAATAGATAGAGTTTGCTTGATGAGAGATCACCCAGCCCTTCCGGGCTGCGCTGTCGCACAGCAAACAGGATGCGCATGACGTCAGATCTGCACTGACATCGAGATCTAGAAAAGCATTCGCCGA                                      >  8:194965/1‑136
                                                                                              CTGCCAAATCAATAGATAGAGTTTGCTTGATGAGAGATCACCCAGCCCTTCCGGGCTGCGCTGTCGCACAGCAAACAGGATGCGCATGACGTCAGATCTGCACTGACATCGAGATCTAGAAAAGCATTCGCCGACT                                    >  7:150088/1‑136
                                                                                                  CAAATCAATAGATAGAGTTTGCTTGATGAGAGATCACCCAGCCCTTCCGGGCTGCGCTGTCGCACAGCAAACAGGATGCGCATGACGTCAGATCTGCACTGACATCGAGATCTAGAAAAGCATTCGCCGACTGAT                                 >  5:89750/1‑135
                                                                                                        AATAGATAGAGTTTGCTTGATGAGAGATCACCCAGCCCTTCCGGGCTGCGCTGTCGCACAGCAAACAGGATGCGCATGACGTCAGATCTGCACTGACATCGAGATCTAGAAAAGCATTCGCCGACTGATCCGGGT                           >  2:231435/1‑135
                                                                                                        AATAGATAGAGTTTGCTTGATGAGAGATCACCCAGCCCTTCCGGGCTGCGCTGTCGCACAGCAAACAGGATGCGCATGACGTCA                                                                              <  1:87781/84‑1
                                                                                                        AATAGATAGAGTTTGCTTGATGAGAGATCACCCAGCCCTTCCGGGCTGCGCTGTCGCACAGCAAACAGGATGCGCATGACGTCA                                                                              >  2:87781/1‑84
                                                                                                            GATAGAGTTTGCTTGATGAGAGATCACCCAGCCCTTCCGGGCTGCGCTGTCGCACAGCAAACAGGATGCGCATGACGTCAGATCTGCACTGACATCGAGATCTAGAAAAGCATTCGCCGACTGATCCGGGTAGGT                       <  7:95053/135‑1
                                                                                                            GATAGAGTTTGCTTGATGAGAGATCACCCAGCCCTTCCGGGCTGCGCTGTCGCACAGCAAACAGGATGCGCATGACGTCAGATCTGCACTGACATCGAGATCTAGAAAAGCATTCGCCGACTGATCCGGGTAGG                        >  1:58088/1‑134
                                                                                                            GATAGAGTTTGCGTGATGAGAGATCACCCAGCCCTTCCGGGCTGCGCTGTCGCACAGCAAACAGGATGCGCATGACGTCAGATCTGCACTGACATCGAGATCTAGAAAAGCATTCGCCGACTGATCCGGGTAGGT                       <  8:306459/135‑1
                                                                                                               AGAGTTTGCTTGATGAGAGATCACCCAGCCCTTCCGGGCTGCGCTGTCGCACAGCAAACAGGATGCGCATGACGTCAGATCTGCACTGACATCGAGATCTAGAAAAGCATTCGCCGACTGATCCGGGTAGGTCAGC                   >  7:244977/1‑136
                                                                                                                GAGTTTGCTTGATGAGAGATCACCCAGCCCTTCCGGGCTGCGCTGTCGCACAGCAAACAGGATGCGCATGACGTCAGATCTGCACTGACATCGAGATCTAGAAAAGCATTCGCCGACTGATCCGGGTAGGTCAGCC                  <  8:158907/136‑1
                                                                                                                  GTTTGCTTGATGAGAGATCACCCAGCCCTTCCGGGCTGCGCTGTCGCACAGCAAACAGGATGCGCATGACGTCAGATCTGCACTGACATCGAGATCTAGAAAAGCATTCGCCGACTGATCCGGGTAGGTCAGCCGC                >  8:149079/1‑136
                                                                                                                   TTTGCTTGATGAGAGATCACCCAGCCCTTCCGGGCTGCGCTGTCGCACAGCAAACAGGATGCGCATGACGTCAGATCTGCACTGACATCGAGATCTAGAAAAGCATTCGCCGACTGATCCGGGTAGGTCAGCCGC                <  8:403907/135‑1
                                                                                                                    TTGCTTGATGAGAGATCACCCAGCCCTTCCGGGCTGCGCTGTCGCACAGCAAACAGGATGCGCATGACGTCAGATCTGCACTGACATCGAGATCTAGAAAATCATTCGCCGACTGATACGGGTAGGTCAGACGC                >  1:410062/1‑134
                                                                                                                    TTGCTTGATGAGAGATCACCCAGCCCTTCCGGGCTGCGCTGTCGCACAGCAAACAGGATGCGCATGACGTCAGATCTGCACTGACATCGAGATCTAGAAAAGCATTCGCCGACTGATCCGGGTAGGTCAGCCGCC               <  4:405477/135‑1
                                                                                                                    TTGCTTGATGAGAGATCACCCAGCCCTTCCGGGCTGCGCTGTCGCACAGCAAACAGGATGCGCATGACGTCAGATCTGCACTGACATCGAGATCTAGAAAAGCATTCGCCGACTGATCCGGGTAGGTCAGCCGCC               <  4:117631/135‑1
                                                                                                                       CTTGATGAGAGATCACCCAGCCCTTCCGGGCTGCGCTGTCGCACAGCAAACAGGATGCGCATGACGTCAGATCTGCACTGACATCGAGATCTAGAAAAGCATTCGCCGACTGATCCGGGTAGGTCAGCCGCCGAA            >  7:232170/1‑135
                                                                                                                       CTTGATGAGAGAACACCCAGCCCTTCCGGGCTGCGCTGTCGCACAGCAAACAGGATGCGCAGGACGTCAGAGCTGCACTGACATCGAGATCTAGAAACCCAATCGCCGACTGATCCGGGTAGGTCAGCCGCCGA             <  3:341291/134‑1
                                                                                                                        TTGATGAGAGATCACCCAGCCCTTCCGGGCTGCGCTGTCGCACAGCAAACAGGATGCGCATGACGTCAGATCTGCACTGACATCGAGATCTAGAAAAGCATTCGCCGACTGATCCGGGTAGGTCAGCCGCCGAAT           >  6:310671/1‑135
                                                                                                                        TTGATGAGAGATCACCCAGCCCTTCCGGGCTGCGCTGTCGCACAGCAAACAGGATGCGCATGACGTCAGATCTGCACTGACATCGAGATCTAGAAAAGCATTCGCCGACTGATCCGGGTAGGTCAGCCGCCGAAT           >  8:388176/1‑135
                                                                                                                        TTGATGAGAGATCACCCAGCCCTTCCGGGCTGCGCTGTCGCACAGCAAACAGGATGCGCATGACGTCAGATCTGCACTGACATCGAGATCTAGAAAAGCATTCGCCGACTGATCCGGGTAGGTCAGCCGCCGAAT           >  3:391649/1‑135
                                                                                                                         TGATGAGAGATCACCCAGCCCTTCCGGGCTGCGCTGTCGCACAGCAAACAGGATGCGCATGACGTCAGATCTGCACTGACATCGAGATCTAGAAAAGCATTCGCCGACTGATCCGGGTAGGTCAGCCGCCGAATA          >  2:124122/1‑135
                                                                                                                          GATGAGAGATCACCCAGCCCTTCCGGGCTGCGCTGTCGCACAGCAAACAGGATGCGCATGACGTCAGATCTGCACTGCCATCGAGATCTAGAAAAGCATTCGCCGACTGATCCGGGTAGGTCAGCCGCCGAATACT        >  8:96752/1‑136
                                                                                                                             GAGAGATCACCCAGCCCTTCCGTGCTGCGCTGTCGCACAGCAAACAGGATGCGCATGACGTCAGATCTGCACTGACATCGAGATCTAGAAAAGCATTCGCCGACTGATCCGGGTAGGTCAGCCGCCGAATACTTT      <  2:75708/135‑1
                                                                                                                             GAGAGATCACCCAGCCCTTCCGGGCTGCGCTGTCGCACAGCAAACAGGATGCGCATGACGTCAGATCTGCACTGACATCGAGATCTAGAAAAGCATTCGCCGACTGATCCGGGTAGGTCAGCCGCCGAATACTTTG     >  8:374546/1‑136
                                                                                                                             GAGAGATCACCCAGCCCTTCCGGGCTGCGCTGTCGCACAGCAAACAGGATGCGCATGACGTCAGATCTGCACTGACATCGAGATCTAGAAAAGCATTCGCCGACTGATCCGGGTAGGTCAGCCGCCGAATACTTT      <  5:391286/135‑1
                                                                                                                             GAGAGATCACCCAGCCCTTCCGGGCTGCGCTGTCGCACAGCAAACAGGATGCGCATGACGTCAGATCTGCACTGACATCGAGATCTAGAAAAGCATTCGCCGACTGATCCGGGTAGGTCAGCCGCCCAATACTTT      >  1:190393/1‑135
                                                                                                                             GAGAGATCACCCAGCCCTTCCGGGCTGCGCTGTCGCACAGCAAACAGGATGCGCATGACGTCAGATCTGCACTGACATC                                                              >  4:307618/1‑79
                                                                                                                             GAGAGATCACCCAGCCCTTCCGGGCTGCGCTGTCGCACAGCAAACAGGATGCGCATGACGTCAGATCTGCACTGACATC                                                              <  3:307618/79‑1
                                                                                                                              AGAGATCACCCAGCCCTTCCGGGCTGCGCTGTCGCACAGCAAACAGGATGCGCATGACGTCAGATCTGCACTGACATCGAGATCTAGAAAAGCATTCGCCGACTGATCCGGGTAGGTCAGCCGCCGAATACTTTGC    >  7:136411/1‑136
                                                                                                                              AGAGATCACCCAGCCCTTCCGGGCTGCGCTGTCGCACAGCAAACAGGATGCGCATGACGTCAGATCTGCACTGACATCGAGATCTAGAAAAGCATTCGCCGACTGATCCGGGTAGGTCAG                    >  5:73603/1‑120
                                                                                                                              AGAGATCACCCAGCCCTTCCGGGCTGCGCTGTCGCACAGCAAACAGGATGCGCATGACGTCAGATCTGCACTGACATCGAGATCTAGAAAAGCATTCGCCGACTGATCCGGGTAGGTCAG                    <  6:73603/120‑1
                                                                                                                              AGAGATCACCCAGCCCTTCCGGGCTGCGCTGTCGCACAGCAAACAGGATGCGCATGACGTCAGATCTGCACTGACATC                                                              <  6:358767/78‑1
                                                                                                                              AGAGATCACCCAGCCCTTCCGGGCTGCGCTGTCGCACAGCAAACAGGATGCGCATGACGTCAGATCTGCACTGACATC                                                              >  5:358767/1‑78
                                                                                                                              AGAGATCACCCAGCCCTTCCGGGCTGCGCTGTCGCACAGCAAACAGG                                                                                             <  7:289138/47‑1
                                                                                                                              AGAGATCACCCAGCCCTTCCGGGCTGCGCTGTCGCACAGCAAACAGG                                                                                             >  8:289138/1‑47
                                                                                                                               GAGATCACCCAGCCCTTCCGGGCTGCGCTGTCGCACAGCAAACAGGATGCGCATGACGTCAGATCTGCACTGACATCGAGATCTAGAAAAGCATTCGCCGACTGATCCGGGTAGGTCAGCCGCCGAATACTTTGCT   <  8:373470/136‑1
                                                                                                                               GAGATCACCCAGCCCTTCCGGGCTGCGCTGTCGCACAGCAAACAGGATGCGCATGACGTCAGATCTGCACTGACATCGAGATCTAGAAAAGCATTCGCCGACTGATCCGGGTAGGTCAGCCGCCGAATACTTTGC    <  1:355459/135‑1
                                                                                                                               GAGATCACCCAGCCCTTCCGGGCTGCGCTGTCGCACAGCAAACAGGATGCGCATGACGTCAGATCTGCACTGACATCGAGATCTAGAAAAGCATTCGCCGACTGATCCGGGTAGGTCAGCCGCCGAATACTTTGC    <  1:95081/135‑1
                                                                                                                               GAGATCACCCAGCCCTTCCGGGCTGCGCTGTCGCACAGCAAACAGGATGCGCATGACGTCAGATCTGCACTGACATCGAGATCTAGAAAAGCATTCGCCGACTGATCCGGGTAGGTCAGCCGCCGAATACTTTGC    <  4:166814/135‑1
                                                                                                                               GAGATCACCCAGCCCTTCCGGGCTGCGCTGTCGCACAGCAAACAGGATGCGCATGACGTCAGATCTGCACTGACATCGAGATCTAGAAAAGCATTCGCCGACTGATCCGGGTAGGTCAGCCGCCGAATACTTTG     <  4:134942/134‑1
                                                                                                                               GAGATCACCCAGCCCTTCCGGGCTGCGCTGTCGCACAGCAAACAGGATGCGCATGACGTCAGATCTGCACTGACATCGAGATCTAGAAAAGCATTCGCCGACTGATCCGGGTAGGTCAGCCGCCGAATACTTTG     <  3:142791/134‑1
                                                                                                                                AGATCACCCAGCCCTTCCGGGCTGCGCTGTCGCACAGCAAACAGGATGCGCATGACGTCAGATCTGCACTGACATCGAGATCTAGAAAAGCATTCGCCGACTGATCCGGGTAGGTCAGCCGCCGAATACTTTGCTA  <  7:276578/136‑1
                                                                                                                                AGATCACCCAGCCCTTCCGGGCTGCGCTGTCGCACAGCAAACAGGATGCGCATGACGTCAGATCTGCACTGACATCGAGATCTAGAAAAGCATTCGCCGACTGATCCGGGTAGGTCAGCCGCCGAATACTTTGCTA  <  7:283487/136‑1
                                                                                                                                AGATCACCCAGCCCTTCCGGGCTGCGCTGTCGCACAGCAAACAGGATGCGCATGACGTCAGATCTGCACTGACATCGAGATCTAGAAAAGCATTCGCCGACTGATCCGGGTAGGTCAGCCGCCGAATACTTTGCT   <  6:78189/135‑1
                                                                                                                                 GATCACCCAGCCCTTCCGGGCTGCGCTGTCGCACAGCAAACAGGATGCGCATGACGTCAGATCTGCACTGACATCGAGATCTAGAAAAGCATTCGCCGACTGATCCGGGTAGGTCAGCCGCCGAATACTTTGCTA  <  6:73306/135‑1
                                                                                                                                 GATCACCCAGCCCTTCCGGGCTGCGCTGTCGCACAGCAAACAGGATGCGCATGACGTCAGATCTGCACTGACATCGAGATCTAGAAAAGCATTCGCCGACTGATCCGGGTAGGTCAGCCGCCGAATACTTTGCTA  <  1:387027/135‑1
                                                                                                                                 GATCACCCAGCCCTTCCGGGCTGCGCTGTCGCACAGCAAACAGGATGCGCATGACGTCAGATCTGCACTGACATCGAGATCTAGAAAAGCATTCGCCGACTGATCCGGGTAGGTCAGCCGCCGAATACTTTGCTA  >  6:309057/1‑135
                                                                                                                                                                                                                                                                        
CGCGGTGTATGGCACCGGTTGCACCGGTGTTCGCGGGTAAACCCGCTCCTACATTGATTGCGCGAGCTTTCGAATTTTGAGCAAGGCAGTGTCCCTGCCAAATCAATAGATAGAGTTTGCTTGATGAGAG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  KT2440/4918929‑4918800
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gagATCACCCAGCCCTTCCGGGCTGCGCTGTCGCACAGCAAACAGGATGCGCATGACGTCAGATCTGCACTGACATCGAGATCTAGAAAAGCATTCGCCGACTGATCCGGGTAGGTCAGCCGCCGAATACTTTGCTA  <  KT2440/5539492‑5539359

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.