New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? KT2440 = 49188010 (0.000)59 (0.950) 31/230 NT 100% coding (6/789 nt) soj_1 Sporulation initiation inhibitor protein Soj
?KT2440 5216408 = NA (NA)intergenic (‑50/+386) rhaS_5/CJ019_01212 HTH‑type transcriptional activator RhaS/IS110 family transposase ISPpu9

TAGCTGGTCATCGAGCCGTGCGGGTCGAGGTCGACGACGACCACGCGCTTGCCGGCCTCGGCCAGCAGGCCGGCCAGGGCAATGGTAGTGGTGGTCTTGCCGACACCACCTTTTTGATTGGCTACTGCCCAGACT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  KT2440/4918667‑4918801
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ctTCTATCAAACAAAAGATAACCCACTGTTCTTTCTAGCGAAAAAAACAGGCGCGCGGGGTCAATGGCGGCGAAGTGTTCACTCTTCTATACGTGGTCACAGCAAGCTGTGCCGACAGGGATTAACGCCGATGCC  >  KT2440/5216408‑5216540
                                                                                                                                                                                                                                                                            
TAGCTGGTCATCGAGCCGTGCGGGTCGAGGTCGACGACGACCACGCGCTTGCCGGCCTCGGCCAGCAGGCCGGCCAGGGCAATGGTAGTGGTGGTCTTGCCGACACCACCTTTTTGATTGGCTACTGCCCAGACT                                                                                                                                       >  3:187836/1‑135
 AGCTGGTCATCGAGCCGTGCGGGTCGAGGTCGACGACGACCACGCGCTTGCCGGCCTCGGCCAGCAGGCCGGCCAGGGCAATGGTAGTGGTGGTCTTGCCGACACCACCTTTTTGATTGGCTACTGCCCAGACTT                                                                                                                                      <  5:424359/135‑1
    TGGTCATCGAGCCGTGCGGGTCGAGGTCGACGACGACCACGCGCTTGCCGGCCTCGGCCAGCAGGCCGGCCAGGGCAATGGTAGTGGTGGTCTTGCCGACACCACCTTTTTGATTGGCTACTGCCCAGACTTCT                                                                                                                                    <  2:198693/134‑1
       TCATCGAGCCGTGCGGGTCGAGGTCGACGACGACCACGCGCTTGCCGGCCTCGGCCAGCAGGCCGGCCAGGGCAATGGTAGTGGTGGTCTTGCCGACACCACCTTTTTGATTGGCTACTGCCCAGACTTCTAT                                                                                                                                  <  3:192765/133‑1
           CGAGCCGTGCGGGTCGAGGTCGACGACGACCACGCGCTTGCCGGCCTCGGGCATCAGGCCGGCCAGGGCAATGGTAGTGGTGGTCTTGCCGCCACCACCGTTTTGATTGGCTACTTCCCAGACATCGATCAAAC                                                                                                                             >  5:360711/1‑134
               CCGGGCGGGTCGAGGTCGACGACGACCACGCGCTTGCCGGCCTCGGCCAGCAGGCCGGCCAGGGCAATGGTAGTGGTGGTCTTGCCGACACCACCTTTTTGATTGGCTACTGCCCAGACTTCTATCAAACAAAAG                                                                                                                        <  2:105684/135‑1
                 ggGCGGGTCGAGGTCGACGACGACCACGCGCTTGCGGGCCTCGGCCTGCAGGCCGGACAGGGCATTGGTAGTGGTGGTGTTGCCGACACCACCTTTTTGTTTGGCTACTGCCCAGACTTGTATCAAACAAAAGATA                                                                                                                     <  7:231103/134‑1
                  TGCGGGTCGAGGTCGACGACGACCACGCGCTTGCCGGCCTCGGCCAGCAGGCCGGCCAGGGCAATGGTAGTGGTGGTCTTGCCGACACCACCTTTTTGATTGGCTACTGCCCAGACTTCTATCAAACAAAAGATA                                                                                                                     <  3:378817/135‑1
                    CGGGTCGAGGTCGACGACGACCACGCGCTTGCCGGCCTCGGCCAGCAGGCCGGCCAGGGCAATGGTAGTGGTGGTCTTGCCGACACCACCTTTTTGATTGGCTACTGCCCAGACTTCTATCAAACAAAAGATAAC                                                                                                                   <  2:380545/135‑1
                    CGGGTCGAGGTCGACGACGACCACGCGCTTGCCGGCCTCGGCCAGCAGGCCGGCCAGGGCAATGGTAGTGGTGGTCTTGCCGACACCACCTTTTTGATTGGCTACTGCCCAGACTTCTATCAAACAAAAGATAAC                                                                                                                   <  1:238996/135‑1
                     GGGTCGAGGTCGACGACGACCACGCGCTTGCCGGCCTCGGCCAGCAGGCCGGCCAGGGCAATGGTAGTGGTGGTCTTGCCGACACCACCTTTTTGATTGGGTACTGCCCAGACTTCTATCAAACAAAAGAAAAC                                                                                                                   >  5:129070/1‑134
                          GAGGTCGACGACGACCACGCGCTTGCCGGCCTCGGCCAGCAGGCCGGCCAGGGCAATGGTAGTGGTGGTCTTGCCGACACCCCCTTTTTGATTGGCTGCTGCCCAGACGTCTATCAAACAAAAGATAACCCACag                                                                                                             >  5:409821/1‑133
                                   GACGACCACGCGCTTGCCGGCCTCGGCCAGCAGGCCGGCCAGGGCAATGGTAGTGGTGGTCTTGCCGACACCACCTTTTTGATTGGCTACTGCCCAGACTTCTATCAAACAAAAGATAACCCACTGTTCTTTCTA                                                                                                    <  6:441859/135‑1
                                    ACGACCACGCGCTTGCCGGCCTCGGCCCGCAGGCCGGCCAGGGCAATGGTAGTGGTGGTCTTGCCGACACCACCTTTTTGATTGGCTACTGCCCAGACTTCTATCTACCAAAAGATAACCCACTGTTCTTTGTAG                                                                                                   >  5:268932/1‑135
                                    ACGACCACGCGCTTGCCGGCCTCGGCCAGCAGGCCGGCCAGGGCAATGGTAGTGGTGGTCTTGCCGACACCACCTTTTTGATTGGCTACTGCCCAGACTTCTATCAAACAAAAGATAACCCACTGTTCTTTCTAG                                                                                                   >  5:2829/1‑135
                                                   CCGGCCTCGGCCAGCAGGCCGGCCAGGGCAATGGTAGTGGTGGTCTTGCCGACACCACCTTTTTGATTGGCTACTGCCCAGACTTCTATCAAACAAAAGATAACCCACTGTTCTTTCTAGCGAAAAAAACAGGCG                                                                                    <  7:263329/135‑1
                                                    CGGCCTCGGCCAGCAGGCCGGCCAGGGCAATGGTAGTGGTGGTCTTGCCGACACCACCTTTTTGATTGGCTACTGCCCAGACTTCTATCAAACAAAAGATAACCCACTGTTCTTTCTAGCGAAAAAAACAGGCG                                                                                    <  2:265189/134‑1
                                                           GGCCAGCAGGCCGGCCAGGGCAATGGTAGTGGTGGTGTTGCCGACACCACCTTTTTGATTGGCTACTGCCCAGACTTCTATCAAACAAAAGATAACCCACTGTTCTTTCAAGCGAAAAAAACAGGCGCGCGGGGT                                                                            <  5:192870/135‑1
                                                            GCCAGCAGGCCGGCCAGGGCAATGGTAGTGGTGGTCTTGCCGACACCACCTTTTTGATTGGCTACTGCCCAGACTTCTATCAAACAAAAGATAACCCACTGTTCTTTCTAGCGAAAAAAACAGGCGCGCGGGGT                                                                            <  4:187836/134‑1
                                                             CCAGCAGGCCGGCCAGGGCAATGGTAGTGGTGGTCTTGCCGACACCACCTTTTTGATTGTCTTCTGCCCAGACGTCTATCAAACAAAAGATAACCCACTGTTCTTTCTAGAGAAAAAAACAGGCGCGCGGGGGCA                                                                          >  4:266711/1‑135
                                                               AGCCGGCCGGCCAGGGCAATGGTAGTGGTGGTGTTGCCGACACCACCATTTTGATTGGCTACTGCCCAGACTTCTATCAAACAAAACCTAAACCCCAGGTCTTTCTATGGAAAAAAACAGGCGCGCGGGGTCAAT                                                                        >  4:210458/1‑135
                                                               AGCAGGCCGGCCAGGGCAATGGTAGTGGTGGTCTTGCCGACACCACCTTTTTGATTGGCTACTGCCCAGACTTCTATCAAACAAAAGATAACCCACTGTTCTTTCTAGCGAAAAAAACAGGCGCGCGGGGTCAATG                                                                       <  8:323667/136‑1
                                                                    GCCGGCCAGGGCAATGGTAGTGGTGGTCTTGCCGACACCACCTTTTTGATTGGCTACTGCCCAGACTTCTATCAAACAAAAGATAACCCACTGTTCTTTCTAGCGAAAAAAACAGGCGCGCGGGGTCAATGGCGG                                                                   <  2:145744/135‑1
                                                                    GCCGGCCAGGGCAATGGTAGTGGTGGTCTTGCCGACACCACCTTTTTGATTGGCTACTGCCCAGACTTCTATCAAACAAAAGATAACCCACTGTTCTTTCTAGCGAAAAAAACAGGCGCGCGGGGTCAATGGCGG                                                                   <  3:283431/135‑1
                                                                    GCCGGCCAGGGCAATGGTAGGGGTGGTCTTGCCGACACCACCTTTTTGATTGGCTACTTCCCATACTTCTATCAAACAAAAGATAACCCACTGTTCTTTCTAGCGAAAAAAACAGGAGCGCTGGGTCAATGGCGG                                                                   <  3:269682/135‑1
                                                                     CCGGCCAGGGCAATGGTAGTGGTGGTCTTGCCGACACCACCTTTTTGATTGGCTACTGCCCAGACTTCTATCAAACAAAAGATAACCCACTGTTCTTTCTAGCGAAAAAAACAGGCGCGCGGGGTCAATGGCGGC                                                                  <  6:388660/135‑1
                                                                     CCGGCCAGGGCAATGGTAGTGGGTGTCTTGCCGACACCACCTTTTTGATTGGCTACTGCCCAGACTTCTATCAAACAAAAGATAACCCACTGTTCTTTCTAGCGAAAAAAACAGGCGCGCGGGGTCAATGGCGGC                                                                  <  4:261598/135‑1
                                                                         CCAGGGCAATGGTAGTGGGGGTCTTGCCGACACCACCTTTTTGATTGGCTACTGCCCAGACTTCTATCAAACAAAAGATAACCCACTGTTCTTTCTAGCGAAAAAAACAGGCGCGCGGGGTCAATGGCGGCGAAGT                                                             <  8:361052/136‑1
                                                                           AGGGCAATGGTAGTGGTGGTCTTGCCGACACCACCTTTTTGATTGGCTACTGCCCAGACTTCTATCACACAAAAGATAACCCACTGTTCTTTCTAGCGAAAAAAACAGGCGCGCGGGGTCAATGGCGGCGAAGTGT                                                           <  7:44423/136‑1
                                                                           AGGGCAATGGTAGTGGTGGTCTTGCCGACACCACCTTTTTGATTGGCTACTGCCCAGACTTCTATCAAACAAAAGATAACCCACTGTTCTTTCTAGCGAAAAAAACAGGCGCGCGGGGTCAATGGCGGCGAAGTGT                                                           <  7:81816/136‑1
                                                                            GGGCAATGGTAGTGGTGGTCTTGCCGACACCACCTTTTTGATTGGCTACTGCCCAGACTTCTCTCAAACAAAAGATAACCCACTGTTCTTTCTAGCGAAAAAAACAGGCGCGCGGGGTCAATGGCGGCGAAGTGT                                                           <  5:30033/135‑1
                                                                            GGGCAATGGTAGTGGTGGTCTTGCCGACACCACCTTTTTGATTGGCTACTGCCCAGACTTCTATCAAACAAAAGATAACCCACTGTTCTTTCTAGCGAAAAAAACAGGCGCGCGGGGTCAATGGCGGCGAAGTGT                                                           <  6:2829/135‑1
                                                                            GGGCAATGGTAGTGGTGGTCTTGCCGACACCACCTTTTTGATTGGCTACTGCCCAGACTTCTATCAAACAAAAGATAACCCACTGTTCTTTCTAGCGAAAAAAACAGGCGCGCGGGGTCAATGGCGGCGAAGTGT                                                           <  3:399060/135‑1
                                                                            GGGCAATGGTAGTGGTGGTCTTGCCGACACCACCTTTTTGATTGGCTACTGCCCAGACTTCTATCAAACAAAAGATAACCCACTGTTCTTTCTAGCGAAAAAAACAGGCGCGCGGGGTCAATGGCGGCGAAGTGT                                                           <  3:406995/135‑1
                                                                            GGGCAATGGTAGTGGTGGTCTTGCCGACACCACCTTTTTGATTGGCTACTGCCCAGACTTCTATCAAACAAAAGATAACCCACTGTTCTTTCTAGCGAAAAAAACAGGCGCGCGGGGTCAATGGCGGCGAAGTGT                                                           <  3:438467/135‑1
                                                                            GGGCAATGGTAGTGGTGGTCTTGCCGACACCACCTTTTTGATTGGCTACTGCCCAGACTTCTATCAAACAAAAGATAACCCACTGTTCTTTCTAGCGAAAAAAACAGGCGCGCGGGGTCAATGGCGGCGAAGTGT                                                           <  3:147874/135‑1
                                                                            GGGCAATGGTAGTGGTGGTCTTGCCGACACCACCTTTTTGATTGGCTACTGCCCAGACTTCTATCAAACAAAAGATAACCCACTGTTCTTTCTAGCGAAAAAAACAGGCGCGCGGGGTCAATGGCGGCGAAGTGT                                                           <  2:8730/135‑1
                                                                            GGGCAATGGTAGTGGTGGTCTTGCCGACACCACCTTTTTGATTGGCTACTGCCCAGACTTCTATCAAACAAAAGATAACCCACTGTTCTTTCTAGCGAAAAAAACAGGCGCGCGGGGTCAATGGCGGCGAAGTGT                                                           <  1:80523/135‑1
                                                                            GGGAAATGGTAGTGGTGGTCTTGCCGACACCACCTTTTTGATTGGCTACTGCCCAGACTTCTATCAAACAAAAGATAACCCACTGTTCTTTCTAGCGAAAAAAACAGGCGCGCGGGGTCAATGGCGGCGAAGTGT                                                           <  3:252987/135‑1
                                                                                 ATGGTAGTGGTGGTCTTGCCGACACCACCTTTTTGATTGGCTACTGCCCAGACTTCTATCAAACAAAAGATAACCCACTGTTCTTTCTAGCGAAAAAAACAGGCGCGCGGGGTCAATGGCGGCGAAGTGTTCACTC                                                     <  8:394061/136‑1
                                                                                     TAGTGGTGGTCTTGCCGACACCACCTTTTTGATTGGCTACTGCCCAGACTTCTATCAAACAAAAG                                                                                                                        <  4:295651/65‑1
                                                                                     TAGTGGTGGTCTTGCCGACACCACCTTTTTGATTGGCTACTGCCCAGACTTCTATCAAACAAAAG                                                                                                                        >  3:295651/1‑65
                                                                                         GGTGGTCTTGCCGACACCACCTTTTTGATTGGCTACTGCCCAGACTTCTATCAAACAAAAGATAACCCACTGTTCTTTCTAGCGAAAAAAACAGGCGCGCGGGGTCAATGGCGGCGAAGTGTTCACTCTTCTAT                                               <  1:368505/134‑1
                                                                                          GTGGTCTTGCCGACACCACCTTTTTGATTGGCTACTGCCCAGACTTCTATCAAACAAAAGATACCCCACTGTTCTTTCTAGCGAAAAAAACAGGCGCGCGGGGTCAATGGCGGCGAAGTGTTCACTCTTCTATAC                                             >  4:298053/1‑135
                                                                                          GTGGTCTTGCCGACACCACCTTTTTGATTGGCTACTGCCCAGACTTCTATCAAACAAAAGATAACCCACTGTTCTTTCTAGCGAAAAAAACAGGCGCGCGGGGTCAATGGCGGCGAAGTGTTCACTCTTCTATACG                                            >  8:132931/1‑136
                                                                                          GTGGTCTTGCCGACACCACCTTTTTGATTGGCTACTGCCCAGACTTCTATCAAACAAAAGATAACCCACTGTTCTTTCTAGCGAAAAAAACAGGCGCGCGGGGTCAATGGCGGCGAAGTGTTCACTCTTCTATAC                                             >  1:149444/1‑135
                                                                                            GGTCTTGCCGACACCACCTTTTTGATTGGCTACTGCCCAGACTTCTATCAAACAAAAGATAACCCACTGTTCTTTCTAGCGAAAAAAACAGGCGCGCGGGGTCAATGGCGGCGAAGTGTTCACTCTTCTATACGT                                           <  6:89084/135‑1
                                                                                            GGTCTTGCCGACACAAGCTTTTTGATTGGCTACTGCCCAGACTTCTATCAAACAAAAGATAACCCACTGTTCTTTCTAGCGAAAAAAACAGGCGCGCGGGGTCAATGGCGGCGAAGTGTTCACTCTTCTATACGT                                           <  6:360711/135‑1
                                                                                             GTCTTGCCGACACCACCTTTTTGATTGGCTACTGCCCAGACTTCTATCAAACAAAAGATAACCCACTGTTCTTTCTAGCGAAAAAAACAGGCGCGCGGGGTCAATGGCGGCGAAGTGTTCACTCTTCTATACGTG                                          >  3:174007/1‑135
                                                                                                TTGCCGACACCACCTTTTTGATTGGCTACTGCCCAGACTTCTATCAAACAAAAGATAACCCACTGTTCTTTCTAGCGAAAAAAACAGGCGCGCGGGGTCACTGGCGGCGAAGTGTTCACTCTTCTATACGTGGTC                                       >  2:89891/1‑135
                                                                                                TTGCCGACACCACCTTTTTGATTGGCTACTGCCCAGACTTCTATCAAACAAAAGATAACCCACTGTTCTTTCTAGCGAAAAAAACAGGCGCGCGGGGTCAATGGCGGCGAAGTGTTCACTCTTCTATACGTGGTC                                       >  6:403401/1‑135
                                                                                                TTGCCGACACCACCTTTTTGATTGGCTACTGCCCAGACTTCTATCAAACAAAAGATAACCCACTGTTCTTTCTAGCGAAAAAAACAGGCGCGCGGGGTCAATGGCGGCGAAGTGTTCACTCTTCTATACGTGGTC                                       >  1:95150/1‑135
                                                                                                  GCCGACACCACCTTTTTGATTGGCTACTGCCCAGACTTCTATCAAACAAAAGATAACCCACTGTTCTTTCTAGCGAAAAAAACAGGCGCGCGGGGTCATTGGCGGCGAAGTGTTCACTCTTCTATACGTGGTCAC                                     >  3:363732/1‑135
                                                                                                  GCCGACACCACCTTTTTGATTGGCTACTGCCCAGACTTCTATCAAACAAAAGATAACCCACTGTTCTTTCTAGCGAAAAAAACAGGCGCGCGGGGTCAATGGCGGCGAAGTGTTCACTCTTCTATACGTGGTC                                       >  4:429509/1‑133
                                                                                                    CGACACCACCTTTTTGATTGGCTACTGCCCAGACTTCTATCAAACAAAAGATACCCCACTGTTCTTTCTAGCGAAAAAAACAGGCGCGCGGGGTCAATGGCGGCGAAGTGTTCACTCTTCTATACGTGGTCACAGC                                  <  7:81950/136‑1
                                                                                                     GACACCACCTTTTTGATTGGCTACTGCCCAGACTTCTATCAAACAAAAGATAACCCACTGTTCTTTCTAGCGAAAAAAACAGGCGCGCGGGGTCAATGGCGGCGAAGTGTTCACTCTTCTATACGTGGTCACAG                                   >  3:338467/1‑134
                                                                                                                TTTGATTGGCTACTGCCCAGACTTCTATCAAACAAAAGATAACCCACTGTTCTTTCTAGCGAAAAAAACAGGCGCGCGGGGTCAATGGCGGCGAAGTGTTCACTCTTCTATACGTGGTCACAGCAAGCTGTGCCG                       <  7:132931/135‑1
                                                                                                                 TTGATTGGCTACTGCCCAGACTTCTATCAAACAAAAGATAACCCACTGTTCTTTCTAGCGAAAAAAACAGGCGCGCGGGGTCAATGGCGGCGAAGTGTTCACTCTTCTATACGTGGTCACAGCAAGCTGTGCCG                       <  4:157912/134‑1
                                                                                                                 TTGATTGGCTACTGCCCAGACTTCTATCAAACAAAAGATAACCCACTGTTCTTTCTAGCGAAAAAAACAGGCGCGCGGGGTCAATGGCGGCGAAGTGTTCACTCTTCTATACGTGGTCACAGCAAGCTGTGCCG                       <  2:153536/134‑1
                                                                                                                  TGATTGGCTACTGCCCAGACTTCTATCAAACAAAAGATAACCCACTGTTCTTTCTAGCGAAAAAAACAGGCG                                                                                    >  6:181286/1‑72
                                                                                                                  TGATTGGCTACTGCCCAGACTTCTATCAAACAAAAGATAACCCACTGTTCTTTCTAGCGAAAAAAACAGGCG                                                                                    <  5:181286/72‑1
                                                                                                                       GGCTACTGCCCAGACTTCTATCAAACAAAAGATAACCCACTGTTCTTTCTAGCGATAAAAACAGGCGCGCGGGGTCAATGGCGGCGAAGTGTTCACTCTTCTATACGTGGTCACAGCAAGCTGTGCCGACAGGGAT               >  8:15748/1‑136
                                                                                                                          TACTGCCCAGACTTCTATCAAACAAAAGATAACCCACTGTTCTTTCTAGCGAAAAAAACAGGCGCGCGGGGTCAATGGCGGCGAAGTGTTCACTCTTCTATACGTGGTCACAGCAAGCTGTGCCGACAGGGATTA             >  1:72846/1‑135
                                                                                                                                  AGACTTCTATCAAACAAAAGATAACCCACTGTTCTTTCTAGCGAAAAAAACAGGCGCGCGGGGTCAATGGCGGCGAAGTGTTCACTCTTCTATACGTGGTCACAGCAAGCTGTGCCGACAGGGATTAACGCCGAT     >  4:24083/1‑135
                                                                                                                                     CTTCTATCAAACAAAAGATAACCCACTGTTCTTTCTAGCGAAAAAAACAGGCGCGCGGGGTCAATGTCGGCGAAGTGTTCACTCTTCTATACGTGGTCACAGCAAGCTGTGCCGACAGGGATTAACGCCGATGC   >  1:181220/1‑134
                                                                                                                                     CTTCTATCAAACAAAAGATAACCCACTGTTCTTTCTAGCGAAAAAAACAGGCGCGCGGGGTCAATGGCGGCGAAGTGTTCACTCTTCTATACGTGGTCACAGCAAGCTGTGCCGACAGGGATTAACGCCGATGCC  >  4:267990/1‑135
                                                                                                                                     CTTCTATCAAACAAAAGATAACCCACTGTTCTTTCTAGCGAAAAAAACAGGCGCGCGGGGTCAATGGCGGCGAAGTGTTCACTCTTCTATACGTGGTCACAGCAAGCTGTGCCGACAGGGATTAACGCCGATGCC  >  3:60097/1‑135
                                                                                                                                     CTTCTATCAAACAAAAGATAACCCACTGTTCTTTCTAGCGAAAAAAACAGGCGCGCGGGGTCAATGGCGGCGAAGTGTTCACTCTTCTATACGTGGTCACAGCAAGCTGTGCCGACAGGGATTAACGCCGATGCC  <  5:154987/135‑1
                                                                                                                                     CTTCTATCAAACAAAAGATAACCCACTGTTCTTTCTAGCGAAAAAAACAGGCGCGCGGGGTCAATGGCGGCGA                                                                >  7:157341/1‑73
                                                                                                                                     CTTCTATCAAACAAAAGATAACCCACTGTTCTTTCTAGCGAAAAAAACAGGCGCGCGGGGTCAATGGCGGCGA                                                                <  8:157341/73‑1
                                                                                                                                                                                                                                                                            
TAGCTGGTCATCGAGCCGTGCGGGTCGAGGTCGACGACGACCACGCGCTTGCCGGCCTCGGCCAGCAGGCCGGCCAGGGCAATGGTAGTGGTGGTCTTGCCGACACCACCTTTTTGATTGGCTACTGCCCAGACT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  KT2440/4918667‑4918801
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ctTCTATCAAACAAAAGATAACCCACTGTTCTTTCTAGCGAAAAAAACAGGCGCGCGGGGTCAATGGCGGCGAAGTGTTCACTCTTCTATACGTGGTCACAGCAAGCTGTGCCGACAGGGATTAACGCCGATGCC  >  KT2440/5216408‑5216540

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.