| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | KT2440 | 6,033,064 | G→C | 16.3% | intergenic (‑249/+45) | CJ019_00572 ← / ← pyrE | IS110 family transposase ISPpu10/Orotate phosphoribosyltransferase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | KT2440 | 6,033,064 | 0 | G | C | 16.3% | 160.6 / 6.3 | 68 | intergenic (‑249/+45) | CJ019_00572/pyrE | IS110 family transposase ISPpu10/Orotate phosphoribosyltransferase |
| Reads supporting (aligned to +/- strand): ref base G (43/11); new base C (2/10); total (47/21) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 7.42e-05 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
GAGGAGGGGTGATTTCTCCTACGGTCTGTACTGCGCGAACAGTCAGAAGCGAGTTATGGCCCTCCTCCTCCCTTCAAGTCCTACCATACAAGCGGGTTTA‑CCCGCGAAAGGGCCAGATCAGGCGGCACAAAAAAA‑GGCGACCCTCTGAAGAAGGTCGCCTTTTTCATTCCTGGGCCAGGATCAGATCCCGTACTGCGCCCGGTAGGCCTCGACAGCCGGCAGATGCTGTTTCAGCTGTGGATCGTCAGCCAGGAACTCCAGCACCTGGGT > KT2440/6032929‑6033198 | gaggaggGGTGATTTCTCATACGGTCTGTACTGCGCGAACAGTCAGAAGCGAGTTATGGCCCTCCTCCTCCCTTCAAGTCCTACCATACAAGCGGGTTTA‑CCCGCGAAAGGGCCAGATCAGGCGGCACAAAAAAA‑g < 8:331174/136‑1 (MQ=255) aggGGTGATTTCTCCTACGGTCTGTACTGCGCGAACAGTCAGAAGCGAGTTATGGCCCTCCTCCTCCCTGCAAGTCCGACCATACAAGCGGGTTTT‑CCCGCGAAAGGGCCAGATCAGGCGGCACAAAAAAA‑GGCGa > 7:351202/1‑136 (MQ=255) aggGGTGATTTCTCCTACGGTCTGTACTGCGCGAACAGTCAGAAGCGAGTTATGGCCCGCCTCCTCCCTTCAAGTCCTACCAGACAAGCGGGTTTA‑CCCCCGAAAGGGCCAGATCAGGCGGCACAAAAAAA‑GTCg > 1:67911/1‑135 (MQ=255) gggTGATTTCTCCTACGGTCTGTACTGCGCGAACAGTCAGAAGCGAGTTATGGCCCTCCTCCTCCCTTCAAGTCCTACCATACAAGCGCGTTTA‑CCCGCGAAAGGGCCAGATCAGCCGGCACAAAAAAA‑TGCGAc > 4:222355/1‑135 (MQ=255) ggTGATTTCTCGTACGGTGTTTACTGGGCGAACAGTCATATGCTATTTATGGCCCTCCTCCTCCCTTCAAGTCCTACAATACAAGCGGGTTTA‑CCCGCTAAAGGGCCAGATCAGGCGGCAAAAAAAAA‑GGCGAc < 4:218720/134‑1 (MQ=17) tctcCTACGGTCTGTACTGCGCGAACAGTCAGAAGCGAGTTATGGCCCTCCTCCTCCCTTCAAGTCCTACCATACAAGCGGGTTTA‑CCCGCGAAAGGGCCAGATCAGGCGGCACAAAAAAA‑GGCGACCctct > 1:166011/1‑132 (MQ=255) tatcCTACGGTCTGTACTGCGCGAACAGTCAGAAGCCAGTTATGGCCCTCCTCCTCCCTTCAAGTCCTACCATACAACCCGGTTTA‑CCCGCGAAAGGGCCAGATCACGCGGCCCAAAAAAA‑CGCGAccagct > 6:34229/3‑128 (MQ=17) ctccGGTCTGTACTGCGCGAACAGTCAGAAGCGAGTTAGGGCCCTCCTCCTCCCTTCAAGTCCTACCATACAAGCGGGTTTC‑CCCGCGAAAGGGCCAGATCAGGCGGCACAAAAAAC‑GGCGACCCTCTgaaga < 7:139998/130‑1 (MQ=255) ggTCTGTACTGCGCGACCAGTCAGAAGCGAGTTATGGCCCTCCTCCTCCCTTCAAGTCCTACCAAACAAGCGGGTTTC‑CCCGCGAACGGGCCAGATCAGGCGGCACAAAAAAC‑GGCGACCCTCTGAAGAAgggc < 6:198349/134‑3 (MQ=18) tGTACTGCGCGAACAGTCAGAAGCGAGTTATGGCCCTCCTCCTCCCTTCAAGTCCTACCATACAAGCGGGTTTA‑CCCGCGAAAGGGCCAGATCAGGCGGCACAAAAAAA‑GGCGACCCTCTGAAGAAGGTCGCCtt > 1:40104/1‑135 (MQ=255) aCTGCGCGAACAGTCAGAAGCGAGTTATGGCCCTCCTCCTCCCTTCAAGTCCTACCATACAAGCGGGTTTA‑CCCGCGAAAGGGCCAGATCAGGCGGCACAAAAAAA‑GGCGACCCTCTGAAGCAGGTCGccggttt > 5:283256/1‑130 (MQ=255) aCTGCGCGAACAGTCAGAAGCGAGTTATGGCCCTCCTCCTCCCTTCAAGTCCTACCATACAAGCGGGTTTA‑CCCGCGAAAGGGCCAGATCAGGCGGCACAAAAAAA‑GGCGACCCTCTGAAGAAGGTCGCCtttt > 3:212882/1‑134 (MQ=255) ccccaccagacagaAGCGCGTTAGGCCCCTCCCCCACCCTTCACGCCCACCAAAACACGCGGGTTCC‑CCCGCGAACGGCCCAGATCCGGCTGCACAAAAAAC‑GGCGACCCTCTGAAGAAGGTCGCCTTTTTCAt < 8:434341/128‑1 (MQ=255) gAACAGTCAGAAGCGAGTTATGGCCCTCCTCCTCCCTTCAAGTCCTCCCATACAAGCGGGTTTA‑CCCGCGAAAGGGCCAGATCAGGCGGCACAAAAAAA‑GGCGACCCTCTGAAGAAGGTCGCCGTTTTCATTCCTg > 7:434341/1‑136 (MQ=255) gAACAGTCAGAAGCGAGTTATGGCCCTCCTCCTCCCTTCAAGTCCTACCATACAAGCGGGTTTA‑CCCGCGAAAGGGCCAGCTCAGGCGGCACAAAAAAA‑GGCGACCCTCTGAAGAAGGTCGCCTTTTTCATTCCt > 4:183910/1‑135 (MQ=255) gAACAGTCAGAAGCGAGTTATGGCCCTCCTCCTCCCTTCAAGTCCTACCATACAAGCGGGTTTA‑CCCGCGAAAGGGCCAGATCAGGCGGCACAAAAAAA‑GGCGACCCTCTGAAGAAGGTCGCCTTTTtccttcct > 1:178679/1‑135 (MQ=255) gAACAGTCAGAAGCGAGTTATGGCCCTCCTCCTCCCTTCAAGTCCTACCATACAAGCGGGTTTA‑CCCGCGAAAGGGCCAGATCAGGCGGCACAAAAAAA‑GGCGACCCTCTGAAGAAGGTCGCCTTTTTGATTCCt > 5:390917/1‑135 (MQ=255) gAACAGTCAGAAGCGAGTTATGGCCCTCCTCCTCCCTTCAAGTCCTACCATACAAGCGGGTTTA‑CCCGCGAAAGGGCCAGATCAGGCGGCACAAAAAAA‑GGCGACCCTCTGAAGAAGGTCGCCTTTTTCATTcca > 5:51299/1‑134 (MQ=255) gAACAGTCAGAAGCGAGTTATGGCCCTCCTCCTCCCTTCAAGTCCTACCATACAAGCGGGTTTA‑CCCGCGAAAGGGCCAGATCAGGCGGCACAAAAAAA‑GGCGACCCTCTGAAGAAGGTCGCCTTTTTCATTCCt > 2:416547/1‑135 (MQ=255) gAACAGTCAGAAGCGAGTTATGGCCCTCCTCCTCCCTTCAAGTCCTACCATACAAGCGGGTTTA‑CCCGCGAAAGGGCCAGATCAGGCGGCACAAAAAAA‑GGCGACCCTCTGAAGAAGGTCGCCTTTTTCATTCCt > 2:388783/1‑135 (MQ=255) gAACAGTCAGAAGCGAGTTATGGCCCTCCTCCTCCCTTCAAGTCCTACCATACAAGCGGGTTTA‑CCCGCGAAAGGGCCAGATCAGGCGGCACAAAAAAA‑GGCGACCCTCTGAAGAAGGTCGCCTTTTTCATTCCt > 3:9845/1‑135 (MQ=255) gAACAGTCAGAAGCGAGTTATGGCCCTCCTCCTCCCTTCAAGTCCTACCATACAAGCGGGTTTA‑CCCGCGAAAGGGCCAGATCAGGCGGCACAAAAAAA‑GGCGACCCTCTGAAGAAGGTCGCCTTTTTCATTCCt > 1:57429/1‑135 (MQ=255) gAACAGTCAGAAGCGAGTTATGGCCCTCCTCCTCCCTTCAAGTCCTACCATACAAGCGGGTTTA‑CCCGCGAAAGGGCCAGATCAGGCGGCACAAAAAAA‑GGCGACCCTCTGAAGAAGGTCGCCTTTTTCATTCCt > 4:2510/1‑135 (MQ=255) gAACAGTCAGAAGCGAGTTATGGCCCTCCTCCTCCCTTCAAGTCCTACCATACAAGCGGGTTTA‑CCCGCGAAAGGGCCAGATCAGGCGGCACAAAAAAA‑GGCGACCCTCTGAAGAAGGTCGCCTTTTTCATTCCTg > 7:181245/1‑136 (MQ=255) gAACAGTCAGAAGCGAGTTATGGCCCTCCTCCTCCCTTCAAGTCCTACCATACAAGCGGGTTTA‑CCCGCGAAAGGGCCAGATCAGGCGGCACAAAAAAA‑GGCGACCCTCTGAAGAAGGTCGCCGTTTTCATTCCt > 2:371153/1‑135 (MQ=255) gAACAGTCAGAAGCGAGTTATGGCCCTCCTCCTCCCTTCAAGTCCTACCATACAAGCGGGTTTA‑CCCGCGAAAGGGCCAGATCAGGCCCCACAAAAAAA‑TGCGAGCCTCTGAAGAAGGTCGCCGGTTTAATTGCt > 5:14311/1‑135 (MQ=18) gAACAGTCAGAAGCGAGTTATGGCCCTCCTCCTCCCTTCAAGTCCTACCATACAAGCGGGTTTA‑CACGCGAAAGGGCCAGATCAGGAGGCACAAAAAAA‑GGCGACCCTCTGAAGAAGGTCGCCATTTTCATTCCTg > 7:186122/1‑136 (MQ=255) gAACAGTCAGAAGCGAGTTATGGCCCTCCTCCTCCCTTCAAGTCCTACAATACAAGCGGGTTTA‑CCCGCGAAAGGGCCAGATCAGGCGGCACAAAAAAA‑GGCGACCCTCTGAAGAATGTCGCCTTTTTAATTCCt > 5:8215/1‑135 (MQ=255) gAACAGTCAGAAGAGAGTTATGGCAATCCTCCTCCCTACAAGTCCTCACATACAAGCGGGTTTA‑CAAGCGATAGTGCCAGATCAGGCGGCACAAAAAAA‑GGCGACCCTCTGAAGAAGTTCGCCTTTTTCAttgat > 3:113549/1‑132 (MQ=25) gTCAGAAGCGAGTTATGGCCCTCCTCCTCCCTTCAAGTCCTACCATACAAGCGGGTTTA‑CCCGCGAAAGGGCCAGATCAGGCGGCACAAAAAAA‑GGCGAACCTCTGAAGAAGGTCGCCTTTTTCATTCCTggg > 2:12641/1‑133 (MQ=255) gTCAGAAGCGAGTTATGGCCCTCCTCCTCCCTTCAAGTCCTACCAAACAAGCGGGTTTA‑CCCGCGAAAGGGCCAGATCAGGCGGCACAAAAAAA‑GGCGACCCTCAGAAGAAGGTCGCCTTTATAATACCTGGGcc > 5:425660/1‑135 (MQ=21) gTCAGAAGCGAGTTATGGCCCTCCTCCTCCCTTCAAGTCCTAAAATACAAGAGGGTTTA‑CCCGCGAAAGGGCCAGATCAGGCGGCACAAAAAAA‑GGCGACCCTCTGAAGAAGGTCGCCTTTTTCATTCCTGGGc > 7:11925/1‑134 (MQ=255) agccgCGTGTTAGGGCCCTCCTCCCCCATTCATGTCCTACCAAACCCG‑GGGTTTACCCCGCGAAAGGGCCATATCAGGCGGCACAAAAAAC‑CGCGACCCTCTGAAGAAGGTCGCCTTTTTCATTCCTGGGCCAgg < 1:419376/131‑1 (MQ=255) gacgCGAGTTTTGGCCCACCACCTCCCTACATGACATACAATACACGGGGGTTTA‑CCCGCTAAAGGCCCATAGCAGGCGCCACAAAAAAC‑CGCGACCCTCTGAAGAAGGTCGCCTTTTTCATTCCTGGGCCAGGAt < 8:240064/133‑1 (MQ=255) tgaTGCCCCTCAACCTCCCTACACGTCATACAATACAAGCGGGTTTA‑CCAGCTAACGGGCCAGATCTGGCGGAACAAAAAAC‑GGCGACCCTCTGAAGAAGGTCGCCTTTTTCATTCCTGGGCCAGGATCAGATccc < 8:246980/134‑1 (MQ=255) aaggCCCTCCCCCGCCCATCACTTCCAACCAAACAACCGGGGTAA‑CCCCCGAAAGGGCCACCTCCGGCGCCACAAAAAAACCGCGACCCTCTGAAGAAGGTCGCCTTTTTCATTCCTGGGCCAGGATCAGATccc < 7:351499/133‑1 (MQ=255) aTGGCCCTCCTCCTCCCTTCAAGTCCTACCATACAAGCGGGTTTA‑CCCGCGAAAGGGCCAGATCAGGCGGCACAAAAAAA‑GGCGACCCTCTGAAGAAGGTCGCCTTTTTCATTCCTGGGCCAGGATCAGATccc > 3:272039/1‑134 (MQ=255) aTGGCCCTCCTCCTCCCTTCAAGTCCTACCATACAAGCGGGTTTA‑CCCGCGAAAGGGCCAGATCAGGCGGCACAAAAAAA‑GGCGACCCTCTGAAGAAGGTCGCCGTTTTCATTCCTGGGCCAGGATCAGATccc > 5:215542/1‑134 (MQ=255) tgccccTCCTCCACCCTACAAGACCACCCAAACACGCGGGTTAC‑CCCGCTAACGGGCCAGAACCGGCGCCACAAAAAAC‑CGCGACCCTCTGAAGAAGGTCGCCTTTTTCATTCCTGGGCCAGGATCAGATCCCGt < 4:272039/132‑1 (MQ=255) ggCCCTCCACCTCCCTTCACGGCCAACCATCCACGCGGGTTAA‑CCCGCCAAAGGGCCAGACCAGGCGCCACAAAAAAC‑CGCGACCCTCTGAAGAAGGTCGCCTTTTTCATTCCTGGGCCAGGATCAGATCCCGt < 6:215542/134‑1 (MQ=255) cctcctccCTTCAAGTCCTACCATACACGCGGGTTAA‑CCCGCGAAAGGGCCAGATCAGGCGGCACAAAAAAA‑GGCGACCCTCTGAAGAAGGTCGCCTTTTTCATTCCTGGGCCAGGATCAGATCCCGTACTGCGcc < 7:4444/136‑1 (MQ=255) ctcctccCTTCAAGTCCTACCATACAAGCGGGTTTA‑CCCGCGAAAGGGCCAGATCAGGCGGCACAAAAAAA‑GGCGACCCTCTGAAGAAGGTCGCCTTTTTCATTCCTGGGCCAGGATCAGATCCCGTACTGCGccc > 7:49254/1‑136 (MQ=255) tcctccCTTCAAGTCCTACCATACAAGCGGGTTTA‑CCCGCGAAAGGGCCAGATCAGGCGGCACAAAAAAA‑GGCGACCCTCTGAAGAAGGTCGCCTTTTTCATTCCTGGGACAGGCTCAGATCCCGTACTGCGccc > 3:93425/1‑135 (MQ=255) aaGTCCTACCATACAAGCGGGTTTA‑CCCGCGAAAGGGCCAGATCAGGCGGCACAAAAAAA‑GGCGACCCTCTGAAGAAGGTCGCCTTTTTCATTCCTGGGCCAGGATCAGATCCCGTACTGCGCCCGGTAGGCCt > 3:102321/1‑134 (MQ=255) aaGCCCTACCAAACAAGCGGGTTTA‑CCCGCTAAAGGCCCAGATCAGGCGCCACAAAAAAC‑CGCGACCCTCTGAAGAAGGTCGCCTTTTTCATTCCTGGGCCAGGATCAGATCCCGTACTGCGCCCGGTAGGCCt < 2:57429/134‑1 (MQ=255) gTCCTACCATACCAGCGGGTTTA‑CCCGCGAAAGGGCCAGATCAGGCGGCACAAAAAAC‑GGCGACCCTCTGAAGAAGGTCGCCTTTTTCATTCCTGGGCCAGGATCAGATCCCGTACTGCGCCCGGTAGGCCTCGa < 6:331068/135‑1 (MQ=255) gTCCTACCATACAAGCGGGTTTA‑CCCGCGAAAGGGCCAGATCAGGCGGCACAAAAAAA‑GGCGACCCTCTGAAGAAGGTCGCCTTTTTCATTCCTGGGCCAGGATCAGATCCCGTACTGCGCCCGGTAGGCCTCGa > 5:394836/1‑135 (MQ=255) gTCCTACCATACAAGCGGGTTTA‑CCCGAGAAAGCTCCAGATCAGGAGGCACAAAAAAA‑CGCGCCCCTCTGAAGAAGGTCGCCTTTTTCATTCCTGGGCCAGGATCAGATCCCGTACTGCGCCCCGTAGGCCTCg > 5:167775/1‑134 (MQ=255) ccATACAAGCGGGTTTA‑CCCGCGAAAGGGCCAGATCAGGCGGCACAAAAAAA‑GGCGACCCTCTGAAGAAGGTCGCCTTTTTCATTCCTGGGCCAGGATCAGATCCCGTACTGCGCCCGGTAGGCCTCGACAGCCg > 2:147033/1‑135 (MQ=255) aTACAAGCGGGTTTA‑CCCGCGAAAGGGCCAGATCAGGCGGCACAAAAAAA‑GGCGACCCTCTGAAGAAGGTCGCCTTTTTCATTCCTGGGCCAGGATCAGATCCCGTACTGCGCCCGGTAGGCCTCGACAGCCg > 5:196634/1‑133 (MQ=255) aTACAAGCGGGTTTA‑CCCGCGAAAGGGCCAGATCAGGCGGCACAAAAAAA‑GGAGACCCTCTGAAGAAGGTCGCCATTTTCATTCCTGGGACAGGATCAGATCCCGTACTGCGACCGGTAGGCCTCGACAGCCGGCa > 8:438795/1‑136 (MQ=255) aacacccGGGTTTC‑CCCGCTAATGGCCCAGATGAGGCGGCACAAAAAAC‑CGCGACCCTCTGAAGAAGGTCGCCTTTTTCATTCCTGGGCCAGGATCAGATCCCGTACTGCGCCCGGTAGGCCTCGACAGCCGGCa < 6:425660/129‑1 (MQ=255) gCGGGTTTA‑CCCGCGAAAGGGCCAGATCAGGCGGCACAAAAAAA‑GGCGACCCTCTGAAGAAGGTCGCCTTTTTCATTCCTGGGCCAGGATCAGATCCCGTACTGCGCCCGGTAGGCCTCGACAGCCGGCAGATGc > 4:391190/1‑135 (MQ=255) ggTTTA‑CCCGCGAAAGGGCCAGATCAGGCGGCACAAAAAAA‑GGCGACCCTCTGAAGAAGGTCGCCTTTTTCATTCCTGGGCCAGGATCAGATCCCGTACTGCGCCCGGTAGGCCTCGACAGCCGGCAGATGCTGt > 5:400180/1‑135 (MQ=255) a‑CCCGCGAAAGGGCCAGATCAGGCGGCACAAAAAAA‑GGCGACCCTCTGAAGAAGGTCGCCTTTTTCATTCCTGGGCCAGGATCAGATCCCGTACTGCGCCCGGTAGGCCTCGACAGCCGGCAGCTGCTGTTTCAg > 1:420052/1‑135 (MQ=255) aaGGGCCTCATCAGGCGGCAAAAAAAAC‑CGCGACCCTCTGAAGAAGGTCGCCTTTTTCATTCCTGGGCCAGGATCAGATCCCGTACTGCGCCCGGTAGGCCTCGACAGCCGGCAGATGCTGTTTCAGCTGTGGAt < 2:23046/135‑1 (MQ=255) aaGGGCCAGATCAGGCGGCACAAAAAAA‑GGCGACCCTCTGAAGAAGGTCGCCTTTTTCATTCCTGGGCCAGGATCAGATCCCGTACTGCGCCCGGTAGGCCTCGACAGCCGGCAGATGCTGTTTCAGCTGTGGAt > 2:257679/1‑135 (MQ=255) aaGGGCCAGATCAGGCGGCACAAAAAAA‑GGCGACCCTCTGAAGAAGGTCGCCTTTTTCATTCCTGGGCCAGGATCAGATCCCGGACTTCGCCCGGTAGGCCTCGACAGCCGGCAGATGCTGTGTCAGCTGTGGAt > 1:440251/1‑135 (MQ=255) aGGGCCAGATCAGGCGGCACAAAAAAA‑GGCGACCCTCTGAAGAAGGTCGCCTTTTTCATTCCTGGGCCAGGATCAGATCCCGTACTGCGCCCGGTAGGCCTCGACAGCCGGCAGATGCTGTTTCAGCTGTGGATc > 1:307003/1‑135 (MQ=255) ccccagcAGGCGCCACAAAAAAC‑GGCGACCCTCTGAAGAAGGTCGCCTTTTTCATTCCTGGGCCAGGATCAGATCCCGTACTGCGCCCGGTAGGCCTCGACAGCCGGCAGATGCTGTTTCAGCTGTGGATCGTCa < 5:384959/129‑1 (MQ=255) ccAGATCAGGCGGCACAAAAAAA‑GGCGACCCTCTGAAGAAGGTCGCCTTTTTCATTCCTGGGCCAGGATCAGATCCCGTACTGCGCCCGGTAGGCCTCGACAGCCGGCAGATGCTGTTTCAGCTGTGGATCGTCa < 6:196634/135‑1 (MQ=255) cagaccggcgccACAAAAAAC‑CGCGACCCTCTGAAGACGGTCGCCTTTTTCATTCCTGGGCCAGGATCAGATCCCGTACTGCGCCCGGTAGGCCTCGACAGCCGGCAGATGCTGTTTCAGCTGTGGATCGTCAGcc < 7:399015/130‑1 (MQ=255) gATCCGGCGGCACAAAAAAA‑CGCGACCCTCTGAAGAAGGTCGCCTTTTTCATTCCTGGGCCAGGATCAGATCCCGTACTGCGCCCGGTAGGCCTCGACAGCCGGCAGATGCTGTTTCAGCTGTGGATCGTCAGcc < 6:390917/135‑1 (MQ=255) gATCAGGCGGCACAAAAAAA‑GGCGACCCTCTGAAGAAGGTCGCCTTTTTCATTCCTGGGCCAGGATCAGATCCCGTACTGCGCCCGGTAGGCCTCGACAGCCGGCAGATGCTGTTTCAGCTGTGGATCGTCAGcc < 3:218812/135‑1 (MQ=255) gcggcACAAAAAAA‑GGCGACCCTCTGAAGAAGGTCGCCTTTTTCATTCCTGGGCCAGGATCAGATCCCGTACTGCGCCCGGTAGGCCTCGACAGCCGGCAGATGCTGTTTCAGCTGTGGATCGTCAGCCAGGAACt < 8:49254/136‑1 (MQ=255) gcACAAAAAAA‑GGCGACCCTCTGAAGAAGGTCGCCTTTTTCATTCCTGGGCCAGGATCAGATCCCGTACTGCGCCCGGTAGGCCTCGACAGCCGGCAGATGCTGTTTCAGCTGTGGATCGTCAGCCAGGAACTcc > 4:323891/1‑135 (MQ=255) gcACAAAAAAA‑GGCGACCCTCTGAAGAAGGTCGCCTTTTTCATTCCTGGGCCAGGATCAGATCCCGTACAGCGCCCGGTAGGCCTCGACAGCCGGCAGATGCTGTTTCAGCTGTGGATCGTCAGCCAGGAACTcc > 2:46130/1‑135 (MQ=255) aaaaaaa‑GGCGACCCTCTGAAGAAGGTCGCCTTTTTCATTCCTGGGCCAGGATCAGATCCCGTACTGCGCCCGGTAGGCCTCGACAGCCGGCAGATGCTGTTTCAGCTGTGGATCGTCAGCCAGGAACTCCAGCAc > 8:34093/1‑136 (MQ=255) aaaaaa‑GGCGACCCTCTGAAGAAGGTCGCCGTTTTCATTCCTGGGCCAGGATCAGATCCCGTACTGCGCCCGGTAGGCCTCGCCAGGCGGCAGATGCTGTTTAAGCTGTGGATCGTCAGCCAGGACCTCCAGCAc > 6:249384/1‑135 (MQ=255) ggCGACCCTCTGAAGAAGGTCGCCTTTTTCATTCCTGGGCCAGGATCAGATCCCGTACTGCGCCCGGTAGGCCTCGACAGCCGGCAGATGCTGTTTCAGCTGTGGATCGTCAGCCAGGAACTCCAGCACCTGGGt < 4:9845/135‑1 (MQ=255) | GAGGAGGGGTGATTTCTCCTACGGTCTGTACTGCGCGAACAGTCAGAAGCGAGTTATGGCCCTCCTCCTCCCTTCAAGTCCTACCATACAAGCGGGTTTA‑CCCGCGAAAGGGCCAGATCAGGCGGCACAAAAAAA‑GGCGACCCTCTGAAGAAGGTCGCCTTTTTCATTCCTGGGCCAGGATCAGATCCCGTACTGCGCCCGGTAGGCCTCGACAGCCGGCAGATGCTGTTTCAGCTGTGGATCGTCAGCCAGGAACTCCAGCACCTGGGT > KT2440/6032929‑6033198 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |