| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | KT2440 | 1,233,532 | T→G | 12.6% | G360G (GGT→GGG) | nasC → | Assimilatory nitrate reductase catalyticsubunit |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | KT2440 | 1,233,532 | 0 | T | G | 12.6% | 149.0 / 3.8 | 80 | G360G (GGT→GGG) | nasC | Assimilatory nitrate reductase catalyticsubunit |
| Reads supporting (aligned to +/- strand): ref base T (14/53); new base G (10/2); total (24/56) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 5.96e-05 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
CTGGTGCAACTTGTGAACCTGGTGACCGGCAACCTCGACCGCACAGGCGGCGCGTTGTGCACGGAGCCTGCCGTCGACCTGGTGGCAACCACCTCGGGCGGCCATTTCAACGCCTGGCAGAGCCGTGTGTCGGGTTTGCCCGAGTATGGCGGCGAGCTGCCGGTGGCTGCCCTGGCCGAGGAAATGCAAACACCGGGCGAAGGGCAGGTGCGCGCCCTGGTGACCGTTGCCGGTAACCCTGTGTTGTCCACGCCTAACGGCCGC > KT2440/1233398‑1233661 | ctggTGCAACTTGTGTACCTGGTGACCGGCAACCTCGACCGCACAGGCGGCGCGTTGTGCACGGAGCCTGCCGTCGACCTGGTGGCAACCACCTCGGGCGGCCATTTCAACGCCTGGCAGAGCCGTGTGTCGGGtt < 8:16769/136‑1 (MQ=255) tggTGCATCTTGTGAACCTGGTGACCGGCAACCTCGACCGCACAGGCGGCGCGTTGTGCACGGAGCCTGCCGTCGACCTGGTGGCAACCACCTCGGGCGGCCATTTCAACGCCTGGCAGAGCCGTGTGTCGGGtt < 4:150878/135‑1 (MQ=255) tggTGCAACTTGTGAACCTGGTGACCGGCAACCTCGACCGCACAGGCGGCGCGTTGTGCACGGAGCCTGCCGTCGACCTGGTGGCAACCACCTCGGGCGGCCATTTCAACGCCTGGCAGAGCCGTGTGTCGGGtt > 3:319447/1‑135 (MQ=255) tggTGCAACTTGTGAACCTGGTGACCGGCAACCTCGACCGCACAGGCGGCGCGTTGTGCACGGAGCCTGCCGTCGACCTGGTGGCAACCACCTCGGGCGGCCATTTCAACGCCTGGCAGAGCCGTGTGTCGGGtt < 6:106077/135‑1 (MQ=255) tggTGCAACTTGTGAACCTGGTGACCGGCAACCTCGACCGCACAGGCGGCGCGTTGTGCACGGAGCCTGCCGTCGACCTGGTGGCAACCACCTCGGGCGGCCATTTCAACGCCTGGCAGAGCCGTGTGTCGGGtt > 2:366784/1‑135 (MQ=255) ggTGCAACTTGTGAACCTGGTGACCGGCAACCTCGACCGCACAGGCGGCGCGTTGTGCACGGAGCCTGCCGTCGACCTGGTGGCAACCACCTCGGGCGGCCATTTCAACGCCTGGCAGAGCCGTGTGTCGGGgtt > 6:124419/1‑135 (MQ=255) ggTGCAACTTGTGAACCTGGTGACCGGCAACCTCGACCGCACAGGCGGCGCGTTGTGCACGGAGCCTGCCGTCGACCAGGTCTCAACCACCTCGGGCGGCCATTTCAACGCCTGGCAGAGCCGTGTGTCGGGttt > 2:291624/1‑135 (MQ=255) cAACTTGTGAACCTGGTGACCGGCAACCTCGACCGCACAGGCGGCGCGTTGTGCACGGAGCCTGCCGTCGACCTGGTGGCAACCACCTCGGGCGGCCATTTCAACGCCTGGCAGCGCCGTGGGTAGGGGTTGccc > 6:272881/1‑135 (MQ=255) gtgAACCTGGTGACCGGCAACCTCGACCGCACAGGCGGCGCGTTGTGCACGGAGCCTGCCGTCGACCTGGTGGCAACCACCTCGGGCGGCCATTTCAACGCCTGGCAGAGCCGTGTGTCGGGGTTGCCCGAGTAt > 2:258629/1‑135 (MQ=255) aCCTGGTGACCGGCAACCTCGACCGCACAGGCGGCGCGTTGGGCACGGAGCCTGCCGTCGACCTGGTGGCAACCACCTCGGGCGGCCATTTCAACGCCTGGCAGAGCCGTGTGTCGGGTTTGCCCGAGTATggcg < 5:92139/135‑1 (MQ=255) ccTGGTGACCGGCAACCTCGACCGCACAGGCGGCGCGTTGTGCACGGAGCCTGCCGTCGACCTGGTGGCAACCACCTCGGGCGGCCATTTCAACGCCTGGCAGAGCCGTGGGTCGGGTTTGGCCGAGTTTggcgg > 2:390225/1‑135 (MQ=255) cTGGTGACCGGCAACCTCGACCGCCCAGGCGGCGCGTTGTGCACGGAGCCTGCCGTCGACCTGGTGGCAACCACCTCGGGCGGCCATTTCAACGCCTGGCAGAGCCGTGTGTCGGGTTTGCCCGAGTATggcggc < 6:299499/135‑1 (MQ=255) cTGGTGACCGGCAACCTCGACCGCACAGGCGGCGCGTTGTGCACGGAGCCTGCCGTCGACCTGGTGGCAACCACCTCGGGCGGCCATTTCAACGCCTTGCAGAGCCGTGTGTCGGGTTTGCCCGAGTATggcggc < 4:287709/135‑1 (MQ=255) cTGGTGACCGGCAACCTCGACCGCACAGGCGGCGCGATGGGCACGGAGCCGGCCGGCGACCTGGGGGCAACCACCTCGGGCGGCCATTTCAACGCCTGGCAGAGCCGTGTGTCGGGCGTGCCCGAGTATggcggc < 3:188042/135‑1 (MQ=255) tGACCGGCAACCTCGACCGCCCAGGCGGCGCGGTGTGCACGGAGCCTGCCGTCGACCTGGTGGCAACCACCTCGGGCGGCCATTTCAACGCCTGGCAGAGCCGTGTGTCGGGTTTGCCCGAGTATGGCGGCGAGCt < 7:168312/136‑1 (MQ=255) gACCGGCAACCTCGACCTCACCGGCGGCGCGTTGTGCACGGAGCCTGCCGGCGACCTCGTGGCAACCACCTCGGGCGGCCAGTTCAACGCCTGGCCGAGCCGGGTGTCGGGTTCGCCCGAGTATGGCGGCGAGCt < 3:216961/135‑1 (MQ=255) gACCGGCAACCTCGACCGCACAGGCGGCGCGTTGTGCACGGAGCCTGCCGTCGACCTGGTGGCAACCACCTCGGGCGGCCATTTCACCGCCTGGCAGAGCCGTGTGTCGGGTTTGCCCGAGTATGGCGGCGAGcg > 6:264298/1‑134 (MQ=255) gACCGGCAACCTCGACCGCACAGGCGGCGCGTTGTGCACGGAGCCTGCCGTCGACCTGGTGGCAACCACCTCGGGCGGCCATTTCAACGCCTGGCAGAGCCGTGTGTGGGGGTTGGGCGCGTTTGGCGGCGAgag > 5:414156/1‑133 (MQ=255) gACCGGCAACCTCGACCGCACAGGCGGCGCGTTGTGCACGGAGCCTGCCGTCGACCTGGTGGCAACCACCTCGGGCGGCCATTTCAACGCCTGGCAGAGCCGTGTGTCGGGTTTGCCCGAGTATGGCGGCGAGCt > 4:320097/1‑135 (MQ=255) gACCGGCAACCTCGACCGCACAGGCGGCGCGTTGTGCACGGAGCCTGCCGTCGACCTGGTGGCAACCACCTCGGGCGGCCATTTCAACGCCTGGCAGAGCCGTGTGTCGGGTTTGCCCGAGTATGGCGGCGAGCt < 4:216836/135‑1 (MQ=255) gACCGGCAACCTCGACCGCACAGGCGGCGCGTTGGGCACGGAGCCTGCCGTCGACCTGGTGGCAACCACCTCGGGCGGCCATTTCAACGCCTGGCAGAGCCGTGTGGCGGGTTTGCCCGAGTATGGCGGCGAGCt < 6:16796/135‑1 (MQ=255) gACCGGCAACATCGACCGCACAGGCGCCGCGTTGTCCACGGAGCCTGCAGTCGACCTGGTGGCAACCACCTCCGGCGCCCATGTCAACGCCTGGCAGAGCAGAGTGTCGGGTTTTACCGAGTTAggcgggccgct > 2:110036/1‑129 (MQ=255) gCAAGCTCGACCGCACAGGAGGCGGGTGGTGCACGGAGCCTGCGGTCGACCTGGTGGCAACCACCTCGGGCGGCCTTTTCTACGCCTGGCAGAGCCGTGTGTCGGGTTTGCCCGAGTATGGCGTCGAGCTGCCgg < 6:50181/135‑1 (MQ=255) cAACCTCGACCGCACAGGCGGCGCGTTGTGCACGGAGCCTGCCGTCGACCTGGTGGCAACCACCTCGGGCGGCCATTTCAACGCCTGGCAGAGCCGTGTGTCGGGTTTGCCCGAGTATGGCGGCGAGCTGCCGGt < 3:105423/135‑1 (MQ=255) ccTCGACCGCACAGGCGGCGCGTTGTGCACGGAGCCTGCCGTCGACCTGGTGGCAACCACCTCGGGCGGCCATTTCAACGCCTGGCAGAGCCGTGTGTCGGGTTTGCCCGAGTATGGCGGCGAGCTGCCGGTGGCt < 8:400804/136‑1 (MQ=255) cTCGACCGCACAGGCGGTGCGTTGTGCACGGAGCCTGCCGTCGACCTGGTGGCAACCACCTCGGGCGGCCATTTCAACGCCTGGCAGAGCCGTGTGTCGGGTTTGCCCGAGTATGGCGGCGAGCTGCCGGTGGCt < 2:59802/135‑1 (MQ=255) cTCGACCGCACAGGCGGCGCGTTGTGCACGGAGCCTGCCGTCGACCTGGTGGCAACCACCTCGGGCGGCCATTTCAACGCCTGGCAGAGCCGTGTGTCGGGTTTGCCCGAGTATGGCGGCGAGCTGCCGGTGGCt < 2:33590/135‑1 (MQ=255) cTCGACCGCACAGGCGGCGCGTTGTGCACGGAGCCTGCCGTCGACCTGGTGGCAACCACCTCGGGCGGCCATTTCAACGCCTGGCAGAGCCGTGTGTCGGGTTTGCCCGAGTATGGCGGCGAGCTGCCGGTGGCt < 3:230540/135‑1 (MQ=255) cTCGACCGCACAGGCGGCGCGTTGTGCACGGAGCCTGCCGTCGACCTGGTGGCAACCACCTCGGGCGGCCATTTCAACGCCTGGCAGAGCCGTGTGTCGGGTTTGCCCGAGTATGGCGGCGAGCTGCCGGTGGCt < 1:411605/135‑1 (MQ=255) cTCGACCGCACAGGCGGCGCGTTGTGCACGGAGCCTGCCGGCGACCTGGTGGCAACCACCTCGGGCGGCCATTTCAACGCCTGGCAGAGCCGTGTGTCGGGTTTGCCCGAGTATGGCGGCGAGCTGCCGGTGGCt < 6:115042/135‑1 (MQ=255) cGCACAGGCGGCGCGTTGTGCACGGAGCCTGCCGTCGACCTGGTGGCAACCACCTCGGGCGGCCATTTCAACGCCTGGCAGAGCCGTGTGTCGGGTTTGCCCGAGTATGGCGGCGAGCTGCCGGTGGCTGCCCTg < 3:382404/135‑1 (MQ=255) caGGCGGCGCGTTGTGCACGGAGCCTGCCGTCGACCTGGTGGCAACCACCTCGGGCGGCCATTTCAACGCCTGGCAGAGCCGTGTGTCGGGTTTGCCCGAGTATGGCGGCGAGCTGCCGGTGGCTGCCCTGGCCGa < 7:359493/136‑1 (MQ=255) aGGCGGCGCGTTGTGCACGGAGCCTGCCGTCGACCTGGTGGCAACCACCTCGGGCGGCCATTTCAACGCCTGGCAGAGCCGTGTGTCGGGTTTGCCCGAGTATGGCGGCGAGCTGCCGGTGGCTGCCCTGGCCGa < 6:7330/135‑1 (MQ=255) aGGCGGCGCGTTGTGCACGGAGCCTGCCGTCGACCTGGTGGCAACCACCTCGGGCGGCCATTTCAACGCCTGGCAGAGCCGTGTGTCGGGTTTGCCCGAGTATGGCGGCGAGCTGCCGGTGGCTGCCCTGGCCGa < 6:290576/135‑1 (MQ=255) aGGCGGCGCGTTGTGCACGGAGCCTGCCGTCGACCTGGTGGCAACCACCTCGGGCGGCCATTTCAACGCCTGGCAGAGCCGTGTGTCGGGTTTGCCCGAGTATGGCGGCGAGCTGCCGGTGGCTGCCCTGGCCGa < 4:124808/135‑1 (MQ=255) aGGCGGCGCGTTGTGCACGGAGCCTGCCGTCGACCTGGTGGCAACCACCTCGGGCGGCCATTTCAACGCCTGGCAGAGCCGTGTGGCGGGTTTGCCCGAGTATGGCGGCGAGCTGCCGGTGGCTGCCCTGGCCGa < 5:394738/135‑1 (MQ=255) cgTTGTGCACGGAGCCTGCCGTCGACCTGGTGGCAACCACCTCGGGCGGCCATTTCAACGCCTGGCAGAGCCGTGTGTAGGGGTTGCCCGAGTATGGCCGCGCGCTGCCGGGGGCTGCCCTGGCCGAGGTAATg > 4:284668/1‑134 (MQ=255) tgtgCACGGAGCCTGCCGTCGACCTGGTGGCAACCACCTCGGGCGGCCATTTCAACGCCTGGCAGCGCCGTGGGTCGGGTTTGGCCGCGTATGGCGGCGCGCGGCCGGGGGGGGGCCGGGCCGCGGCAATGCcaa > 5:121264/1‑135 (MQ=255) aCGGAGGCTTCCGTCGAGCTGTTTTCATCGACCTGGGTAGGATAGTTCAACGCCTGTAAGAGCCGTGTGTCGGGTTTGCCCTAGTATTGCGTCTAGCTGCCGGTTGATGCCCTTGACTAGGAAATTAAAACACCgg < 8:108496/136‑1 (MQ=255) aCGGAGCCTGCCGTCGACCTGGTGGCAACCACCTCGGGCGGCCATTTCAACGCCTGGCAGAGCCGTGTGTCGGGTTTGCCCGAGTATGGCGGCGAGCTGCCGGTGTCTGCCCTGGCCGAGGAAATGCAAACACCgg < 7:56230/136‑1 (MQ=255) aCGGAGCCTGCCGTCGACCTGGTGGCAACCACCTCGGGCGGCCATTTCAACGCCTGGCAGAGCCGTGTGTCGGGTTTGCCCGAGTATGGCGGCGAGCTGCCGGTGGCTGCCCTGGCCGAGGAAATGCAAACACCgg < 7:1065/136‑1 (MQ=255) aCGGAGCCTGCCGTCGACCTGGTGGCAACCACCTCGGGCGGCCATTTCAACGCCTGGCAGAGCCGTGTGTCGGGTTTGCCCGAGTATGGCGGCGAGCTGCCGGTGGCTGCCCTGGCCGAGGAAATGCAAACACCgg < 7:255045/136‑1 (MQ=255) aCGGAGCCTGCCGTCGACCTGGTGGCAACCACCTCGGGCGGCCATTTCAACGCCTGGCAGAGCCGTGTGTCGGGGTTTCCCGAGTATGGCGGCGAGCTGCCGGGGGCGTCCCTGGCCGCGGAAATGCCAACACCg > 2:49206/1‑135 (MQ=255) gggAGGCTGCCGTCGACCTGGTGGCTACCACCTGGGGCGGCCATTTCAACGCCTGGCAGAGCCGTGTGGCGGGGTTGCGCGAGTAGGGCGGGGAGCTGCCGGTGGCTGCCCGGGCCGAGGAAATGCAAACACCgg < 6:347659/134‑1 (MQ=255) cGGCGCCTGCCGTCGACCTGGTGGCAACCACCTCGGGCGGCCATTTCAACGCCTGGCAGAGCCGTGTGTCGGGTTTGCCCGAGTATGGCGGCGAGCTGCCGGTGGCTGCCCTGGCCGAGGAAATGCAAACACCgg < 3:413976/135‑1 (MQ=255) cGGAGCCTGCCGTCGACCTGGTGGCAACCACCTCGGGCGGCCATTTCAACGCCTGGCAGAGCCGTGTGTCGGGTTTGCCCGAGTATGGCGGCGAGCTGCCGGTGGCTGCCCTGGCCGAGGAAATGCAAACACCgg < 2:221176/135‑1 (MQ=255) ccggCCGTCGACCTGGTGGCAACCACCTCGGGCGGCCATTTCCACGCCTGGCAGAGCCGTGTGTCGTGTTTGCCCGAGTATGGCGGCGAGCTGCCGGTGGCTGCCCTGGCCGAGGAAATGCAACCACCGGGCGAAg < 8:369193/133‑1 (MQ=255) cTGCCGTCGACCTGGTGGCAACCACCTCGGGCGGCCATTTCAACGCCTGGCAGAGCCGTGGGTGGGGGTTGGCCGAGGATGGCGGCGCGCGGCCGGGGGCTGCCCGGGCCGAGGAAATGCAAACCCCCGGCGCAg > 6:256731/1‑135 (MQ=255) cTGCCGTCGACCTGGTGGCAACCACCTCGGGCGGCCATTTCAACGCCTGGCAGAGCCGTGGGTCGGGGTTGGCCGAGTATGGCGGCGAGCTGCCGGTGGCTGCCCGGGCCGCGGCAATGCAAACACCCGGCGAAg > 5:131120/1‑135 (MQ=255) ccGTCGACCTGGTGGCAACCACCTCGGGCGGCCATTTCAACGCCTGGCAGAGCCGTGTGTCGGGTTTTCCCGAGTATGGCGGCGAGCTGCCGGTGGCTGCCCAGGCCGAGGAAATGCAAACACCGGGCGAATGGc > 2:242630/1‑135 (MQ=255) ccGTCGACCTGGTGGCAACCACCTCGGGCGGCCATTTCAACGCCTGGCAGAGCCGTGTGTCGGGTTTGCCCGAGGATGGCGGCGCGCTGCCGGTGGCTGCCCGGGCCGCGGAAATGCAAACACCGGGCGAAggg > 8:448417/1‑134 (MQ=255) cGTCGACCTGGTGGCAACCACCTCGGGCGGCCATTTCAACGCCTGGCAGAGCCGTGTGTCGGGTTTGCCCGAGTATGGCGGCGAGCTGCCGGTGTCTTCCCTGGCCGAGGAAATGCAAACACCGGGCGAAgttta < 5:429172/135‑5 (MQ=255) gTCGACCTGGTGGCAACCACCTCGGGCGGCCATTTCAACGCCTGGCAGAGCCGTGTGTCGGGTTTGCCCGAGTATGGCGGCGAGCTGCCGGTGGCTGCCCTGGCCGAGGAAATGCAAACACCGGGCGAAGGGccg > 6:429172/1‑133 (MQ=255) gTCGACCTGGTGGCAACCACCTCGGGCGGCCATTTCAACGCCTGGCAGAGCCGTGTGGGGGGTTTGCCCCACGATGGCGGCCGGCTGCCGGTGGCTGCCCGGGCCGCGGCAATGCAAACACCGGGCGAAGGGCAg > 5:87837/1‑135 (MQ=255) gACCTGGTGGCAACCACCTCGGGCGGCCTTTTCCACGCCTGGCAGAGCCGTGTGTCGGGTTTCCCCGAGTATGGCGGCGAGCTGCCGGTGGCTGCCCTGGCCGAGGAAATGCAAACACCGGGCGAAGGGCAGGTg < 1:132310/135‑1 (MQ=255) gACCTGGTGGCAACCACCTCGGGCGGCCATTTCAACGCCTGGCAGAGCCGTGTGTCGGGTTTGCCCGAGTATGGCGGCGAGCTGCCGGTGGCTGCCCTGGCCGAGGAAATGCAAACACCGGGCGAAGGGCAGGTgc < 7:53728/136‑1 (MQ=255) aCCTGGTGGCAACCACCTCGGGCGGCCATTTCACCGCCTGGCAGAGCCGGGTGGCGGGTTTGCCCGAGTATGGCGGCGAGCGGCCGGTGGCTGCCCTGGCCGAGGAAATGCAAACACCGGGCGAAGGGCAGGTgc < 2:384369/135‑1 (MQ=255) aCCTGGTGGCAACCACCGCGGGCGGCCAGTTCAACGCCGGGCAGAGCCGTGTGTCGGGTTTGCCCGAGTATGGCGGCGAGCTGCCGGTGGCTGCCCTGGCCGAGGAAATGCAAACACCGGGCGAAGGGCAGGTgc < 1:448281/135‑1 (MQ=255) aCCTGGGGGCAACCACCTCGGGCGGCCATTTCCACGCCGGGCAGAGCCGGGTGTCGGGTTTGCCGGAGTATGGCGGCGAGCTGCCGGTGGCTGCCCTGGCCGAGGAAATGCAAACACCGGGCGAAGGGCAGGTgc < 2:24968/135‑1 (MQ=255) ggCAACCACCTCGGGCGGCCATTTCAACGCCTGGCAGAGCCGTGTGTCGGGGTTTGCCGAGTTTGGCGGCGCGCTGCCCGGGGGGGCCCGGGCCGCGGGAATTCAAAAACCCGGCGCACGGGCGGGGCGCGCCCt > 6:303386/1‑135 (MQ=255) ggCAACCACCTCGGGCGGCCATTTCAACGCCTGGCAGAGCCGTGGGTCGGGGTTGCCCGAGTATGGCGGCGCGCAGCCGGTGGCTGCCCGGGCCGAGGACATGCAAACACCCGGCGCAGGGCCGGGGCGCGCCCt > 1:384369/1‑135 (MQ=255) ccaccTCGGGCGGCCATTTCAACGCCTGGCAGAGCCGTGTGTCGGGTTTGCCCGAGTATGGCGGCGAGCTGCCGGTGGCTGCCCTGGGCGAGGAAATGCAAACACCGGGCGAAGGGCAGGTGCGCGCCCTGGTGa > 6:387574/1‑135 (MQ=255) caccTCGGGCGGCCATTTCAACGCCTGGCAGAGCCGTGTGTCGGGTTTGCCCGAGTATGGCGGCGAGCTGCCGGTGGCTGCCCTGGCCGAGGAAATGCAAACACCGGGCGAAGGGCAGGTGCGCGCCCTGGTGAcc < 8:155272/136‑1 (MQ=255) accTCGGGCGGCCATTTCAACGCCTGGCAGAGCCGTGTGTCGGGTTTGCCCGAGTATGGCGGCGAGCTGCCGGTGGCTGCCCTGGCCGAGGAAATGCAAACACCGGGCGAAGGGCAGGTGCGCGCCCTGGTGAcc < 4:110075/135‑1 (MQ=255) cTCGGGCGGCCATTGCACCGCCTGGCAGAGCCGTGGGTCGGGTTTGCCCGAGTATGGAGGCGAGCTGCCGGGGGCTGCCCTGGCCGAGGAAATGCAAACACCGGGCGAAGGTCAGGTGCGCGACCTGGTGACCGt < 6:35764/135‑1 (MQ=255) gggCGGCCATTTCAACGCCTGGCAGAGCCGTGTGTCGGGTTTGCCCGAGTATGGCGGCGAGCTGCCGGTGGCTGCCCTGGCCGAGGAAATGCAAACACCGGGCGAAGGGCAGGTGCGCGCCCTGGTGACCGTTGc < 2:139726/135‑1 (MQ=255) gggCGGCCATTTCAACGCCTGGCAGAGCCGTGTGTCGGGTTTGCCCGAGTATGGCGGCGAGCTGCCGGTGGCTGCCCTGGCCGAGGAAATGCAAACACCGGGCGAAGGGCAGGTGCGCGCCCTGGTGACCGTTGc < 2:387509/135‑1 (MQ=255) gggCGGCCATTTCAACGCCTGGCAGAGCCGTGTGTCGGGTTTGCCCGAGTATGGCGGCGAGCTGCCGGTGGCTGCCCTGGCCGAGGAAATGCAAACACCGGGCGAAGGGCAGGTGCGCGCCCTGGTGACCGTTGc < 3:278593/135‑1 (MQ=255) ggcggcCATTTCAACGCCTGGCAGAGCCGTGTGTCGGGTTTGCCCGAGTATGGCGGCGAGCTGCCGGTGGCTGCCCTGGCCGAGGAAATGCAAACACCGGGCGAAGGGCAGGTGCGCGCCCTGGTGACCGTTGc < 3:62325/134‑1 (MQ=255) gcggcCATTTCAACGCCTGGCAGAGCCGTGTGTCGGGTTTGCCCGAGTATGGCGGCGAGCTGCCGGTGGCTGCCCTGGCCGAGGAAATGCAAACACCGGGCGAAGGGCAGGTGCGCGCCCTGGTGACCGTTGCCg < 6:131120/135‑1 (MQ=255) gcCATTTCAACGCCTGGCAGAGCCGTGTGTCGGGTTTGCCCGAGTATGGCGGCGAGCTGCCGGTGGCTGCCCTGGCCGAGGAAATGCAAACACCGGGCGAAGGGCAGGTGCGCGCCCTGGTGACCGTTGCCGGTa < 5:331085/135‑1 (MQ=255) gcCATGTCACCGCCTGGCAGAGCCGTGTGTCGGGTTTGCCCGAGTATGGCGGCGAGCTGCCGGTGGCTGCCCTGGCCGAGGAAATGCAAACACCGGGCGAAGGGCAGGTGCGCGCCCTGGTGACCGTTGCCGGTa < 5:251237/135‑1 (MQ=255) cagtgcAACGCCTGGCAGAGCCTTGTGGCGCGTGTGCCCGCGGATGGCGGCGAGCTGCCGGGGGCTGCCCTGGCCGAGGAAATGCAAACACCGGGCGAATGGCAGTTGCGCGCCCTGGTGACCGGTGCCGGTa < 6:35254/128‑1 (MQ=255) tttCAACGCCTGGCAGAGCCGTGTGTGGGGTTTGTCCGAGTATGGCGGCGAGCTGCCGGTGGCTGCCCGGGCCGCGGAAATGAAAACACCGGGCGAAGGGCCGGTGCGCGCCCTGGTGACCCTTGCCGGTTAc > 2:351025/1‑133 (MQ=255) ttCAACGCCTGGCAGAGCCGTGTGTCGGGTTTGCCCGAGTATGGCGGCGAGCTGCCGGTGGCTGCCCTGGCCGAGGAAATGCAAACACCGGGCGAAGGGCAGGTGCGCGCCCTGGTGACCGTTGCCGGTAACCCt < 3:284668/135‑1 (MQ=255) ttCAACGCCTGGCAGAGCCGTGTGTCGGGTTTGCCCGAGTATGGCGGCGAGCTGCCGGTGGCTGCCCTGGCCGAGGAAATGCAAACACCGGGCGAAGGGCAGGTGCGCGCCCTGGTGACCGTTGCCGGTAACCCt < 4:319447/135‑1 (MQ=255) cGCCTGGCAGAGCCGTGTGTCGGGTTTGCCCGAGTATGGCGGCGAGCTGCCGGTGGCTGCCCTGGCCGAGGAAATGCAAACACCGGGCGAAGGGCAGGTGCGCGCCCTGGTGACCGTTGCCGGTAACCCTGtgtt < 5:161432/135‑1 (MQ=255) ccTGGCAGAGCCGTGTGTCGGGTTTGCCCGAGTATGGCGGCGAGCTGCCGGTGGCTGCCCTGGCCGAGGAAATGCAAACAACGGGCTAAGGGCAGGTGCGCGACCTGGTGACCGTTGCCGGTAACCCTGtgttgt < 3:5634/135‑1 (MQ=255) ccTGGCAGAGCCGTGGGTCGGGTTTGCCCGAGTATGGCGGCGAGCTGCCGGGGGCTGCCCTGGCCGAGGAAATGCAAACACCGGGCGAAGGGCAGGTGCGCGCCCTGGTGACCGTTGCCGGTAACCCTGtgttgt < 4:177033/135‑1 (MQ=255) cGTGTGTCGGGTTTGCCCGAGTATGGCGGCGAGCTGCCGGTGGCTGCCCTGGCCGAGGAAATGCAAACACCGGGCGAAGGGCAGGTGCGCGCCCTGGTGACCGTTGCCGGTAACCCTGTGTTGTCCACGCCTAACg < 7:204129/136‑1 (MQ=255) gtgtCGGGTGTGCCCGAGTATGGCGGCGAGCTGCCGGTGGCTGCCCTGGCCGAGGAAATGCAAACACCGGGCGAAGGGCAGGTGCGCGCCCTGGTGACCGTTGCCGGTAACCCTGTGTTGTCCACGCCTAACGgc < 6:337813/135‑1 (MQ=255) gtCGGGTTTGCCCGAGTATGGCGGCGAGCTGCCGGTGGCTGCCCTGGCCGAGGAAATGCAAACACCGGGCGAAGGGCAGGTGCGCGCCCTGGTGACCGTTGCCGGTAACCCTGTGTTGTCCACGCCTAACGgccg > 4:323902/1‑135 (MQ=255) gtCGGGTTTGCCCGAGTATGGCGGCGAGCTGCCGGTGGCTGCCCTGGCCGAGGAAATGCAAACACCCGGCGAAGGGCAGGTGCGCGCCCTGGTGACCGTTGCCGGTAACCCAGTGTTGTCCACGCCTAACGgccg > 4:440368/1‑135 (MQ=255) gtCGGGGTTTCCCGAGTATGGCGGCGAGCTGCCGGTGGCTGCCCTGGCCGAGGAAATGCAAACACCGGGCGAAGGGCAGGTGCGCGCCCTGGTGACCGTTTCCGGTAACCCTGTGTTGTCCACGCCTAACGgccgc > 8:91989/1‑136 (MQ=255) tCGGGGTTGCCCGAGTATGGCGGCGAGCTGCCGGTGGCTGCCCTGGCCGAGGAAATGCAAACACCGGGCGAAGGGCAGGTGCGCGCCCTGGTGACCGTTGCCGGTAACCCTGTGTTGTCCACGCCTAACGgccgc < 7:161479/135‑1 (MQ=255) cGGGTTTGCCCGAGTATGGCGGCGAGCTGCCGGTGGCTGCCCTGGCCGAGGAAATGCAAACACCGGGCGAAGGGCAGGTgc < 7:264686/81‑1 (MQ=255) cGGGTTTGCCCGAGTATGGCGGCGAGCTGCCGGTGGCTGCCCTGGCCGAGGAAATGCAAACACCGGGCGAAGGGCAGGTgc > 8:264686/1‑81 (MQ=255) | CTGGTGCAACTTGTGAACCTGGTGACCGGCAACCTCGACCGCACAGGCGGCGCGTTGTGCACGGAGCCTGCCGTCGACCTGGTGGCAACCACCTCGGGCGGCCATTTCAACGCCTGGCAGAGCCGTGTGTCGGGTTTGCCCGAGTATGGCGGCGAGCTGCCGGTGGCTGCCCTGGCCGAGGAAATGCAAACACCGGGCGAAGGGCAGGTGCGCGCCCTGGTGACCGTTGCCGGTAACCCTGTGTTGTCCACGCCTAACGGCCGC > KT2440/1233398‑1233661 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |