| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | KT2440 | 1,242,612 | G→T | 5.4% | M152I (ATG→ATT) | bvgA_1 → | Virulence factors putative positivetranscription regulator BvgA |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | KT2440 | 1,242,612 | 0 | G | T | 5.4% | 200.5 / 3.7 | 75 | M152I (ATG→ATT) | bvgA_1 | Virulence factors putative positivetranscription regulator BvgA |
| Reads supporting (aligned to +/- strand): ref base G (36/35); new base T (2/2); total (38/37) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 3.91e-01 | |||||||||||
CGAACTGCTCAGCGCTATCAAGGCTGTGTTGTCGGGTTACAGCTACTTCCCCAACCAGGCCTTGCATGCGTCACGTGGCAGGGGGGCGGGCAGCGAGACGGATATGGTGAATCGCCTTTCTGCGCGAGAAATGACGGTGCTGCAACAACTGGCGCGAGGGCGTTCGAACAAGGAGATTGCCGACAGCATGTACCTCAGTAACAAGACGGTCAGTACCTACAAGTCACGGCTGCTGCTCAAGCTCAATGCACGGTCATTGGTT > KT2440/1242480‑1242741 | cGAACTGCTCAGCGCTATCAAGGCTGTGTTGTCGGGTTACAGCTACTTCCCCAACCAGGCCTTGCATGCGTCACGTGGCAGGGGGGCGGGCAGCGAGACGGATATGGTGAATCGCCTTTCTGCGCGAGAAATGAc < 1:266809/135‑1 (MQ=255)cGAACTGCTCAGCGCTATCAAGGCTGTGTTGTCGGGTTACAGCTACTTCCCCAACCAGGCCTTGCATGCGTCACGTGGCAGGGGGGCGGGCAGCGAGACGGATATGGTGAATCGCCTTTCTGCGCGAGAAATGAc > 5:31145/1‑135 (MQ=255) gAACTGCTCAGCGCTATCAAGGCTGTGTTGTCGGGTTACAGCTACTTCCCCAACCAGGCCTTGCATGCGTCACGTGGCAGGGGGGCGGGCAGCGAGACGGATATGGTGAATCGCCTTTCTGCGCGAGAAATGACg < 3:220959/135‑1 (MQ=255) gcgcTATCAAGGCTGTGTGGTCGGGTTCCAGATACTTCCCGAACCAGGGCTTGCATGGGTCTCGTGTCAGGGGTGGGGGCAGCGAGACGGATATGGTGAATCGCCTTTCTGATCGAGAAATGACGGTGCTGcaac < 3:258037/135‑1 (MQ=255) gcTATCAAGGCTGTGTTGTCGGGTTACAGCTACTTCCCCAACCAGGCCTTGCATGCGTCACGTGGCAGGGGGGCGGGCAGCGAGACGGATATGGTGAATCGCCTTTCTGCGCGAGAAATGACGGTGCTGcaac < 5:221830/133‑1 (MQ=255) gcTATCAAGGCTGTGTTGTCGGGTTACAGCTACTTCCCCAACCAGGCCTTGCATGCGTCACGTGGCAGGGGGGCGGGCAGCGAGACGGATATGGTGAATCGCCTTTCTGCGCGAGAAATGACGGTGCTGcaac > 6:221830/1‑133 (MQ=255) aGGCTGTGTTGTCGGGTTACAGCTACTTCCCCCACCAGGCCTTGCATGCGTCACGTGGCAGGGGGGCGGGCAGCGAGACGGATATGGTGCATCGCCTTTCTGCGCGAGAAATGACGGTGCTGCAACACCTGgcgc > 8:221626/1‑135 (MQ=255) aGGCTGTGTTGTCGGGTTACAGCTACTTCCCCAACCAGGCCTTGCATGCGTCACGTGGCAGGGGGGCGGGCAGCGAGACGGATATGGTGAATCGCCTTTCTGCGCGAGAAATGACGGTGCTGCAACAACTGgcgc > 7:112045/1‑135 (MQ=255) aGGCTGTGTTGTCGGGTTACAGCTACTTCCCCAACCAGGCCTTGCATGCGTCACGTGGCAGGGGGGCGGGCAGCGAGACGGATATGGTGAATCGCCTTTCTGCGCGAGAAATGACGGTGCTGCAACAACTGgcg > 5:289690/1‑134 (MQ=255) aGGCTGTGTTGTCGGGTTACAGCTACTTCCCCAACCAGGCCTTGCATGCGTCACGTGGCAGGGGGGCGGGCAGCGAGACGGATATGGTGAATCGCCTTTCTGCGCGAGAAATGACGGTGCTGCAACAACTGgcg > 1:274396/1‑134 (MQ=255) gtgtTGTCGGGTTACAGCTACTTCCCCAACCAGGCCTTGCATGCGTCACGTGGCAGGGGGGCGGGCAGCGAGACGGATATGGTGAATCGCCTTTCTGCGCGAGAAATGACGGtgc < 5:193702/115‑1 (MQ=255) gtgtTGTCGGGTTACAGCTACTTCCCCAACCAGGCCTTGCATGCGTCACGTGGCAGGGGGGCGGGCAGCGAGACGGATATGGTGAATCGCCTTTCTGCGCGAGAAATGACGGtgc > 6:193702/1‑115 (MQ=255) gtgtTGTCGGGTTACAGCTACTTCCCCAACCAGGCCTTGCATGCGTCACGTGGCAGGGGGGCGGGCAGCGAGACGGATATGGTGAATCGCCTTTCTGCGCGAGAAATGACGGTGCTGCAACAACTGGCGCGAggg > 6:167296/1‑135 (MQ=255) gtgtTGTCGGGTTACAGCTACTTCCACAACCAGGCCTTGCATGCGTCACGTGGCAGGGGGGCGGGCAGCGAGACGGATATGGTGAATCGCCTTTCTGCGCGAGAAATGACGGTGCTGCAACAACTcgagcgagcg > 5:21713/1‑133 (MQ=255) gttgtCGGGTTACAGCTACTTCCCCAACGAGGCCTTGCATGCGTCACGTGGCAGGGGGGCGGGCAGCGAGACTGATATGGTGAATCGCCTTTCTGCGCGAGAAATGACGGTGCTGCAACAACTGGCGCGAGGGc < 6:161777/134‑1 (MQ=255) tgtCGGGTTACAGCTACTTCCCCAACCAGGCCTTGCATGCGTCACGTGGCAGGGGGGCGGGCAGCGAGACGGATATGGTGAATCGCCTTTCTGCGCGAGAAATGACGGTGCTGCAACAACTGGCGCGAGGGCGt < 5:153413/134‑1 (MQ=255) gtCGGGTTACAGCTACTTCCCCAACCAGGCCTTGCATGCGTCACGTGGCAGGGGGGCGGGCAGCGAGACGGATATGGTGAATCGCCTTTCTGCGCGAGAAATGACGGTGCTGCAACAACTGGCGCGAGGGCGtt > 1:3817/1‑134 (MQ=255) gtCGGGTTACAGCTACTTCCCCAACCAGGCCTTGCATGCGTCACGTGGCAGGGGGGCGGGCAGCGAGACGGATATGGTGAATCGCCTTTCTGCGCGAGAAATGACGGTGCTGCAACAACTGGCGCGAGGGCGTTCg > 8:119054/1‑136 (MQ=255) cGGGTTACAGCTACTTCCCCAACCAGGCCTTGCATGCGTCACGTGGCAGGGGGGCGGGCAGCGAGACGGATATGGTGAATCGCCTTTCTGCGCGAGAAATGACGGTGCTGCAACAACTGGCGCGAGGGCGTTCGa < 1:422375/135‑1 (MQ=255) aCAGCTACTTCCCCAACCAGGCCTTGCATGCGTCACGTGGCAGGGGGGCGGGCAGCGAGACGGATATGGTGAATCGCCTTTCTGCGCGAGAAATGACGGTGCTGCAACAACTGGCGCGAGGGCGTTCGAACAAgg < 7:439993/135‑1 (MQ=255) cAGCTACTTCCCCAACCAGGCCTTGCATGCGTCACGTGGCAGGGGGGCGGGCAGCGAGACGGATATGGTGAATCGCCTTTCTGCGCGAGAAATGACGGTGCTGCAACAACTGGCGCGAGGGCGTTCGAACaa > 5:66943/1‑132 (MQ=255) cAGCTACTTCCCCAACCAGGCCTTGCATGCGTCACGTGGCAGGGGGGCGGGCAGCGAGACGGATATGGTGAATCGCCTTTCTGCGCGAGAAATGACGGTGCTGCAACAACTGGCGCGAGGGCGTTCGAACaa > 3:396069/1‑132 (MQ=255) gCTACTTCCCCAACCAGGCCTTGCATGCGTCACGTGGCAGGGGGGCGGGCAGCGAGACGGATATGGTGAATCGCCTTTCTGCGCGAGAAATGACGGTGCTGCAACAACTGGCGCGAGGGCGTTCGAACAAGgaga > 1:393215/1‑135 (MQ=255) gCTACTTCCCCAACCAGGCCTTGCATGCGTCACGTGGCAGGGGGGCGGGCAGCGAGACGGATATGGTGAATCGACTTTCTGCGCGAGAACTGACGGTGCTGCACCACCTGGCGCGAGGGCGTTCGAACAAGgaga > 6:264116/1‑135 (MQ=255) gCTACTTCCACAACCAGGCCTTGCATGCGTCACGTGGCAGGGGGGCGGGCAGCGAGACGGATATGGTGAATCGCCTTTCTGCGCGAGAAATGACGGTGCTGCAACAACTGGCGCGAGGGCGTTCGAACAAGgaga > 2:380362/1‑135 (MQ=255) ccccAACCAGGCCTTGCATGCGTCACGTGGCAGGGGGGCGGGCAGCGAGACGGATATGGTGAATCGCCTTTCTGCGCGAGAAATGACGGTGCTGCAACAACTGGCGCGAGGGCGTTCGAACAAGGAGATTGCCg > 1:4006/1‑134 (MQ=255) ccccAACCAGGCCTTGCATGCGTCACGTGGCAGGGGGGCGGGCAGCGAGACGGATATGGTGAATCGCCTTTCTGCGCGAGAAATGACGGTGCTGCAACAACTGGCGCGAGGGCGTTCGAACAAGGAGATTGCCg > 2:21465/1‑134 (MQ=255) aaCCAGGCCTTGCATGCGTCACGTGGCAGGGGGGCGGGCAGCGAGACGGATATGGTGAATCGCCTTTCTGCGCGAGAAATGACGGTGCTGCAACAACTGGCGCGAGGGCGTTCGAACAAGGAGATTGCCGACAGc < 3:216374/135‑1 (MQ=255) aCCAGGCCTTGCATGCGTCACGTGGCAGGGGGGCGGGCAGCGAGACGGATATGGTGAATCGCCTTTCTGCGCGAGAAATGACGGTGCTGCAACAACTGGCGCGAGGGCGTTCGAACAAGGAGATTCCCGACAGCa > 5:374336/1‑135 (MQ=255) aGGCCTTGCATGCGTCACGTGGCAGGGGGGCGGGCAGCGAGACGGATATGGTGAATCGCCTTTCTGCGCGAGAAATGACGGTGCTGCAACAACTGGCGCGAGGGCGTTCGAACAAGGAGATTGCCGACAGCATGt < 5:43967/135‑1 (MQ=255) cTTGCATGCGTCACGTGGCAGGGGGGCGGGCAGCGAGACGGATATGGTGAATCGCCTTTCTGCGCGAGAAATGACGGTGCTGCAACAACTGGCGCGAGGGCGTTCGAACAAGGAGATTGCCGACAGCATGTACCt > 7:1667/1‑135 (MQ=255) ttgcttgcGTCTCGTGGCTGGGGGGCGGGCAGCGAGACGGATATGGTTAATCGCGTTTCTGCGCGAGAAATGACGGTGCTGAAACAACTGGCGCGAGGGCGTTCGAACAAGGAGATTGCCGACAGCATGTACCTc < 6:289690/135‑1 (MQ=255) aTGCGTCACGTGGCAGGGGGGCGGGCAGCGAGACGGATATGGTGAATCGCCTTTCTGCGCGAGAAATGACGGTGCTGCAACAACTGGCGCGAGGGCGTTCGAACAAGGAGATTGCCGACAGCATGTACCTCAGTa > 6:320538/1‑135 (MQ=255) aTGCGTCACGTGGCAGGGGGGCGGGCAGCGAGA‑GGATATGGTGAATCGCCTTTCTGCGCGAGAAATGACGGTGCTGCAACAACTGGCGCGAGGGCGTTCGAACAAGGAGATTGCCGACAGCATGTACCTCAGTa > 4:228215/1‑134 (MQ=255) tGCGTCACGTGGCAGGGGGGCGGGCAGCGAGTCGGATATGGTGAATCGCCTTTCTGCGCGAGAAATGACGGTGCTGCAACAACTGGCGCGAGGGCGTTCGAACAAGGAGATTGCCGACAGCATGTACCTCAGTAAc < 7:6737/136‑1 (MQ=255) gCGTCACGTGGCAGGGGGGCGGGCAGCGAGACGGATATGGTGAATCGACTTTCTGCGCGAGAAATGACGGTGCTGCAACAACTGGCGCGAGGGCGTTCTAACAAGGAGATTGCCGACAGCATGTACCTCAGTAAc < 4:262867/135‑1 (MQ=255) cACGTGGCAGGGGGGCGGGCAGCGAGACGGATATGGTGAATCGCCTTTCTGCGCGAGAAATGACGGTGCTGCAACAACTGGCGCGAGGGCGTTCGAACAAGGAGATTGCCGACAGCATGTACCTCAGTAACAAGAc < 7:221626/136‑1 (MQ=255) aCGTGGCAGGGGGGCGGGCAGCGAGACGGATATGGTGAATCGCCTTTCTGCGCGAGAAATGACGGTGCTGCAACAACTGGCGCGAGGGCGTTCGAACAAGGAGATTGCCGACAGCATGTACCTCAGTAACAAGAc > 4:387035/1‑135 (MQ=255) aCGTGGCAGGGGGGCGGGCAGCGAGACGGATATGGTGAATCGCCTTTCTGCGCGAGAAATGACGGTGCTGCAACAACTGGCGCGAGGGCGTTCGAACAAGGAGATTGCCGACAGCATGTACCTCAGTAACAAGAc > 6:124479/1‑135 (MQ=255) aCGTGGCAGGGGGGCGGGCAGCGAGACGGATATGGTGAATCGCCTTTCTGCGCGAGAAATGACGGTGCTGCAACAACTGGCGCGAGGGCGTTCGAACAAGGAGATTGCCGACAGCATGTACCTCAGTAACAAGAc < 1:400974/135‑1 (MQ=255) cGTGGCAGGGGGGCGGGCAGAGAGAAGGATATGGGTAATCGACTTTCTGAGCGAGAAATGACGGTGCTTCAACAACTGGCGCGAGGGCGTTCGAAAAAGGAGATTTCCGACAGCATGTACCTCAGTAACAAGAc < 2:282657/134‑1 (MQ=255) ggCAGGGGGGCGGGCAGCGAGACGGATATGGTGAATCGCCTTTCTGCGCTAGAAATGACGGTGCTGCAACAACTGGCGCGAGGGCGTTCGAACAAGGAGATTGc > 2:152702/1‑104 (MQ=255) ggCAGGGGGGCGGGCAGCGAGACGGATATGGTGAATCGCCTTTCTGCGCGAGAAATGACGGTGCTGCAACAACTGGCGCGAGGGCGTTCGAACAAGGAGATTGc < 1:152702/104‑1 (MQ=255) ggCAGGGGGGCGGGCAGCGAGACGGATATGGTGAATCGCCTTTCTGCGCGAGAAATGACGGTGCTGCAACAACTGGCGCGAGGGCGTTCGAACAAGGAGATTGCCGACAGCATGTACCTCAGTAACAAGACGGt > 8:167151/1‑134 (MQ=255) ggCAGGGGGGCGGGCAGCGAGACGGATATGGTGAATCGCCTTTCTGCGCGAGAAATGACGGTGCTGCAACAACTGGCGCGAGGGCGTTCGAACAAGGAGATTGCCGACAGCATGTACCTCAGTAACAACACGGt > 8:290113/1‑134 (MQ=255) ggggTGTGCTGCGAGACTGATATTGTGAATCGCCTTTCTGCGCGATATATGACGGTGCTGATACAAGTGGCGCGTGGGCGTTCTAACTAGGAGTTTGCCGACTGATTGTAGCTCAGTAACAAGACGGTCAGTAc < 6:21713/134‑1 (MQ=255) ggggCGGGCAGCGAGACGGTTTTGTTTAATCGCCTTTCTGCGCTATAATTGAGGGTGCTGCAACAAGGGGCGCGTGGGGTTTCGAACATGGAGATTGCCGACAGATTGTACCTCATTAACAAGACGGTCATTAcc < 4:396069/135‑1 (MQ=255) gcAGCGAGACGGATATGGTGAATCGCCTTTCTGCGCGAGAAATGACGGTGCTGCAACAACTGGCGCGAGGGCGTTCGAACAAGGAGATTGCCGACAGCATGTACCTCAGTAACAAGACGGTCAGTACCTACAAg > 2:147357/1‑134 (MQ=255) aGCGAGACGGATATGGTGAATCGCCTTTCTGCGCGAGAAATGACGGTGCTGCAACAACTGGCGCGAGGGCGTTCGAACAAGGAGATTGCCGACAGCATGTACCTCAGTAACAAGACGGTCAGTACCTACAAGTCa > 2:386478/1‑135 (MQ=255) gagcCGGATTTGGTGAAGCGCCTTTCTGCGCGAGAACTGAGGGTGCTGCAACAACTGGCGCGTGGGCGTGCGAACACGGAGATTGCCGACAGCATGTACCTCAGTAACAAGACGGTCAGTACCTACAAGTCACgg < 1:380362/135‑1 (MQ=255) gagaCGGATATGGTGAATCGCCTTTCTGCGCGAGAAATGACGGTGCTGCAACAACTGGCGCGAGGGCGTTCGAACAAGGAGATTGCCGACAGCATGTACCTCAGTAACAAGACGGTCAGTACCTACAAGTCACgg < 3:218659/135‑1 (MQ=255) gaCGGATATGGTGAATCGCCTTTCTGCGCGAGAAATGACGGTGCTGCAACAACTGGCGCGAGGGCGTTCGAACAAGGAGATTGCCGACAGCATGTACCTCAGTAACAAGACGGTCAGTACCTACAAGTCACGgct > 2:167210/1‑135 (MQ=255) ggATATGGTGAATCGCCTTTCTGCGCGAGAAATGACGGTGCTGCAACAACTGGCGCGAGGGCGTTCGAACAAGGAGATTGCCGACAGCATGTACCTCAGTAACAAGACGGTCAGTACCTACAAGTCACGgctgctg < 8:112045/136‑1 (MQ=255) gATATGGTGAATCGCCTTTCTGCGCGAGAAATGACGGTGCTGCAACAACTGGCGCGAGGGCGTTCGAACAAGGAGATTGCCGACAGCATGTACCTCAGTAACAAGACGGTCAGTACCTACAAGTCACGgctgctg < 2:274396/135‑1 (MQ=255) tGGTGAATCGCCTTTCTGCGCGAGAAATTACGGTGCTGCAACAACTGGCGCGAGGGCGTTCGAACAAGGAGATTGCCGACAGCATGTACCTCAGTAACAAGACGGTCAGTACCTACAAGTCACgg > 6:97319/1‑125 (MQ=255) tGGTGAATCGCCTTTCTGCGCGAGAAATTACGGTGCTGCAACAACTGGCGCGAGGGCGTTCGAACAAGGAGATTGCCGACAGCATGTACCTCAGTAACAAGACGGTCAGTACCTACAAGTCACgg < 5:103945/125‑1 (MQ=255) tGGTGAATCGCCTTTCTGCGCGAGAAATTACGGTGCTGCAACAACTGGCGCGAGGGCGTTCGAACAAGGAGATTGCCGACAGCATGTACCTCAGTAACAAGACGGTCAGTACCTACAAGTCACgg > 6:103945/1‑125 (MQ=255) tGGTGAATCGCCTTTCTGCGCGAGAAATTACGGTGCTGCAACAACTGGCGCGAGGGCGTTCGAACAAGGAGATTGCCGACAGCATGTACCTCAGTAACAAGACGGTCAGTACCTACAAGTCACgg < 5:97319/125‑1 (MQ=255) ggTGAATCGCCTTTCTGCGCGAGAAATGACGGTGCTGCAACAACTGGCGCGAGGGCGTTCGAACAAGGAGATTGCCGACAGCATGTACCTCAGTAACAAGACGGTCAGTACCTACAAGTCACGGCTGCTgctcaa < 2:393215/135‑1 (MQ=255) gTGAATCGCCTTTCTGCGCGAGAAATGACGGTGCTGCAACAACTGGCGCGAGGGCGTTCGAACAAGGAGATTGCCGACAGCATGTACCTCAGTAACAAGACGGTCAGTACCTACAAGTCACGGCTGCTgctcaa < 2:4006/134‑1 (MQ=255) aTCGCCTTTCTGCGCGAGAAATGACGGTGCTGCAACAACTGGCGCGAGGGCGTTCGAACAAGGAGATTGCCGACAGCATGTACCTCAGTAACAAGACGGTCAGTACCTACAAGTCACGGCTGCTgctcaagctca > 3:409983/1‑135 (MQ=255) gcGCCTTTCTGCGCGATAAATGACGGTGCTGCAACAACTGGCGCGAGGGCGTTCGAACAAGGAGATTGCCGACAGCATGTACCTCAGTAACAAGACGGTCAGTACCTACAAGTCACGGCTGCTGCTCAAGCTCAAt < 8:207711/135‑1 (MQ=255) cGCCTTTCTGCGCGAGAAATGACGGTGCTGCAACAACTGGCGCGAGGGCGTTCGAACAAGGAGATTGCCGACAGCATGTACCTCAGTAACAAGACGGTCAGTACCTACAAGTCACGGCTGCTGCTCAAGCTCAAt > 4:422965/1‑135 (MQ=255) cGCCTTTCTGCGCGAGAAATGACGGTGCTGCAACAACTGGCGCGAGGGCGTTCGAACAAGGAGATTGCCGACAGCATGTACCTCAGTAACAAGACGGTCAGTACCTACAAGTCACGGCTGCTGCTCAAGCTCAAt < 5:167296/135‑1 (MQ=255) cGCCTTTCTGCGCGAGAAATGACGGTGCTGCAACAACTGGCGCGAGGGCGTTCGAACAAGGAGATTGCCGACAGCATGTACCTCAGTAACAAGACGGTCAGTACCTACAAGTCACGGCTGCTGCTCAAGCTCAAt > 4:108458/1‑135 (MQ=255) cGCCTTTCTGCGCGAGAAATGACGGTGCTGCAACAACTGGCGCGAGGGCGTTCGAACAAGGAGATTGCCGACAGCATGTACCTCAGTAACAAGACGGTCAGTACCTACAAGTCACGGCTGCTGCTCAAGCTCAAt > 3:376686/1‑135 (MQ=255) cGCCTTTCTGCGCGAGAAATGACGGTGCTGCAACAACTGGCGCGAGGGCGTTCGAACAAGGAGATTGCCGACAGCATGTACCTCAGTAACAAGACGGTCAGTACCTACAAGTCACGGCTGCTGCTCAAGCTCAAt < 1:21465/135‑1 (MQ=255) gCCTTTCTGCGCGAGAAATGACGGTGCTGAAACAACTGGCGCGAGGGCGTTCGAACAAGGATATTGCCGACAGCATGTACCTCATTAACAAGACGGTCAGTACCTACAAGTCACGGCTGCTGCTCAAGCTCAAt < 3:172729/134‑1 (MQ=255) ccTTTCTGCGCGAGAAATGACGGTGCTGCAACAACTGGCGCGAGGGCGTTCGAACAAGGAGATTGCCGACAGCATGTACCTCAGTAACAAGACGGTCAGTACCTACAAGTCACGGCTGCTGCTCAAGCTCAATGc > 2:3009/1‑135 (MQ=255) tttGTGCGCTAGAACTGACGGTGCTGCAACAACTGGCGCGAGGGCGTTCTAACAAGGATATTGCCGACAGAATGTACCTCAGTAACAAGACGGTCATTACCTACAAGTCACGGCTGCTGCTCAAGCTCAATGCAc < 4:370126/135‑1 (MQ=255) cTGCGCGATAAATGACGGTGCTGCAACAACTGGCGCGAGGGCGTTCGAACAAGGAGATTGCCGACAGCATGTACCTCAGTAACAAGACGGTCAGTACCTACAAGTCACGGCTGCTGCTCAAGCTCAATGCACg < 5:264116/133‑1 (MQ=255) gcgAGAAATGACGGTGCTGCAACAACTGGCGCGAGGGCGTTCGAACAAGGAGATTGCCGACAGCATGTACCTCAGTAACAAGACGGTCAGTACCTACAAGTCACGGCTGCTGCTCAAGCTCAATGCACGGTCAtt < 3:195552/135‑1 (MQ=255) gataTGACGGTGCTTCAACAACTGGCGCGAGGGCGTTCGAACATGGAGATTGCCGACTGAATGTACGTCATTAACATGACTGTCAGTACCTACAAGTCACGGCTGCTGCTCAAGCTCAATGCACGGTCATTGGtt < 6:66943/132‑1 (MQ=255) gaAATGACGGTGCTGCAACAACTGGCGCGAGGGCGTTCGAACAAGGAGATTGCCGACAGCATGTACCTCAGTAACAAGACGGTCAGTACCTACAAGTCACGGCTGCTGCTCAAGCTCAATGCACGGTCATTGGtt < 3:228215/135‑1 (MQ=255) gaAATGACGGTGCTGAAACAACTGGCGCGAGGGCGTTCGAACAAGGAGATTGCCGACAGCATGTACCTCAGTAACAAGACGGTCAGTACCTACAAGTCACGGCTGCTGCTCAAGCTCAATGCACTGTCATTGGtt > 7:6857/1‑135 (MQ=255) | CGAACTGCTCAGCGCTATCAAGGCTGTGTTGTCGGGTTACAGCTACTTCCCCAACCAGGCCTTGCATGCGTCACGTGGCAGGGGGGCGGGCAGCGAGACGGATATGGTGAATCGCCTTTCTGCGCGAGAAATGACGGTGCTGCAACAACTGGCGCGAGGGCGTTCGAACAAGGAGATTGCCGACAGCATGTACCTCAGTAACAAGACGGTCAGTACCTACAAGTCACGGCTGCTGCTCAAGCTCAATGCACGGTCATTGGTT > KT2440/1242480‑1242741 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |