| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | KT2440 | 1,671,699 | C→G | 11.7% | intergenic (+125/+62) | CJ019_01570 → / ← CJ019_01571 | hypothetical protein/hypothetical protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | KT2440 | 1,671,699 | 0 | C | G | 11.7% | 182.2 / 2.8 | 87 | intergenic (+125/+62) | CJ019_01570/CJ019_01571 | hypothetical protein/hypothetical protein |
| Reads supporting (aligned to +/- strand): ref base C (37/35); new base G (9/2); total (47/40) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.01e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
CCTGAGTGGTTCATCAGACAGTGTAAGGGCAGCCAGCCAGTGCTTTGCTCCGGCGCTGGCAAGGCTGTCACGGGAAGTCCTCAAGGGCTTTCGCTTGGCCCCGGGC‑GTCTTCCCCAGCGCCCGGGGTTTCTTTTTTCGGCAGGCACGTATCCCCCGTCTGCTTCTGCAACGACCGTGCATACGGGTTGGGCTTATTTGTCCTCAAAGAAACGCCGGCTTTCCTGTAGATAGTCTTCTCGCAATGCCAGGTCCAGCCAGCGGGC > KT2440/1671570‑1671832 | ccTGAGTGGTTCATCAGACAGTGTAAGGGCAGCCAGCCAGTGCTTTGCTCCGGCGCTGGCAAGGCTGTCACGGGAAGTCCTCAAGGGCTTTCGCTTGGCCCCGGGC‑GTCTTCCCCAGCGCCCGGGGTTTCtttttt < 8:47286/136‑1 (MQ=255)ccTGAGTGGTTCATCAGACAGTGTAAGGGCAGCCAGCCAGTGCTTTGCTCCGGCGCTGGCAAGGCTGTCACGGGAAGTCCTCAAGGGCTTTCGCTTGGCCCCGGGC‑GTCTTCCCCAGCGCCCGGGGTTTCttttt > 6:317091/1‑135 (MQ=255)ccTGAGTGGTTCATCAGACAGTGTAAGGGCAGCCAGCCAGTGCTTTGCTCCGGCGCTGGCAAGGCTGTCACGGGAAGTCCTCAAGGGCTTTCGCTTGGCCCCGGGC‑GTCTTCCCCAGCGCCCGGGGGTTCttttt > 6:317090/1‑135 (MQ=255)ccTGAGTGGTTCATCAGACAGTGTAAGGGCAGCCAGCCAGTGCTTTGCTCCGGCGCTGGCAAGGCTGTCACGGGAAGTCCTCAAGGGCTTTCGCTTGGCCCCGGGC‑GTCTTCACCAGCGCCCGGGGTTTCttttt > 2:139508/1‑135 (MQ=255) cTGAGTGGTTCATCAGACAGTGTAAGGGCAGCCAGCCAGTGCTTTGCTCCGGCGCTGGCAAGGCTGTCACGGGAAGTCCTCAAGGGCTTTCGCTTGGCCCCGGGC‑GTCTTCCCCAGCGCCCGGGGTTTCtttttt < 5:302529/135‑1 (MQ=255) cTGAGTGGTTCATCAGACAGTGTAAGGGCAGCCAGCCAGTGCTTTGCTCCGGCGCTGGCAAGGCTGTCACGGGAAGTCCTCAAGGGCTTTCGCTTGGCCCCGGGC‑GTCGTCCCCAGCGCCCGGGGTTTCtttttt > 4:309803/1‑135 (MQ=255) aGTGGTTCATCAGACAGTGTAAGGGCAGCCAGCCAGTGCTTTGCTCCGGCGCTGGCAAGGCTGTCACGGGAAGTCCTCAAGGGCTTTCGCTTGGCCCCGGGC‑GTCTTCCCCAGCGCCCGGGGTTTCTTTTTTCg < 7:14260/134‑1 (MQ=255) gTGGTTCATCAGACAGTGTAAGGGCAGCCAGCCAGTGCTTTGCTCCGGCGCTGGCAAGGCTGTCACGGGAAGTCCTCAAGGGCTTTCGCTTGGCCCCGGGC‑GTCTTCCCCAGCGCCCGGGGTTTCTTTTTTCggc < 6:202496/135‑1 (MQ=255) gTGGTTCATCAGACAGTGTAAGGGCAGCCAGCCAGTGCTTTGCTCCGGCGCTGGCAAGGCTGTCACGGGAAGTCCTCAAGGGCTTTCGCTTGGCCCCGGGC‑GTCTTCCCCAGCGCCCGGGGTTTCTTTTTTCg < 1:388953/133‑1 (MQ=255) gTGGTTCATCAGACAGTGTAAGGGCAGCCAGCCAGTGCTTTGCTCCGGCGCTGGCAAGGCTGTCACGGGAAGTCCTCAAGGGCTTTCGCTTGGCCCCGGGC‑GTCTTCCCCAGCGCCCGGGGGTTCTTTTTTAgg > 7:262810/1‑134 (MQ=255) ggTTCATCAGACAGTGTAAGGGCAGCCAGCCAGTGCTTTGCTCCGGCGCTGGCAAGGCTGTCACGGGAAGTCCTCAAGGGCTTTCGCTTGGCCCCGGGCGGGGTACCCCCCCCCCCGGGGTTGGTTTTTTgggac > 5:379619/1‑133 (MQ=255) catcaGACAGTGTAAGGGCAGCCAGCCAGTGCTTTGCTCCGGCGCTGGCAAGGCTGTCACGGGAAGTCCTCAAGGGCTTTCGCTTGGCCCCGGGC‑GTCTTCCCCAGCGCCCGGGGTTTCTTTTTTCGGCAGGCACg > 7:57095/1‑136 (MQ=255) catcaGACAGTGTAAGGGCAGCCAGCCAGTGCTTTGCTCCGGCGCTGGCAAGGCTGTCACGGGAAGTCCTCAAGGGCTTTCGCTTGGCCCCGGGC‑GTCTTCCCCAGCGCCCGGGGTTTCTTTTTTCGGCAGGCACg < 7:83894/136‑1 (MQ=255) gtgtAAGGGCAGCCAGCCAGTGCTTTGCTCCGGCGCTGGCAAGGCTGTCACGGGAAGTCCTCAAGGGCTTTCGCTTGGCCCCGGGC‑GTCTTCCCCAGCGCCCGGGGTTTCTTTTTTCGGCAGGCACGTATccccc < 5:317091/135‑1 (MQ=255) gtgtAAGGGCAGCCAGCCAGTGCTTTGCTCCGGCGCTGGCAAGGCTGTCACGGGAAGTCCTCAAGGGCTTTCGCTTGGCCCCGGGC‑GTCTTCCCCAGCGCCCGGGGTTTCTTTTTTCGGCAGGCACGTATccccc < 5:317090/135‑1 (MQ=255) gtgtAAGGGCAGCCAGCCAGTGCTTTGCTCCGGCGCTGGCAAGGCTGTCACGGGAAGTCCTCAAGGGCTTTCGCTTGGCCCCGGGC‑GTCTTCCCCAGCGCCCGGGGTTTCTTTTTTCGGCAGGCACGTATccccc < 5:60719/135‑1 (MQ=255) aaGGGCAGCCAGCCAGTGCTTTGCTCCGTCGCTGGCAAGGCTGTCACGGGAAGTCCTCAAGGGCTTTCGCTTGGCACCGGGC‑GTCGTCCCCACCTCCCGGGGTTTCTTTTTTAGGCAGGCACGTATcccccctat > 4:34294/1‑131 (MQ=255) aaGGGCAGCCAGCCAGTGCTTTGCTCCGGCGCTGGCAAGGCTGTCACGGGAAGTCCTCAAGGGCTTTCGCTTGGCCCCGGGC‑GTCTTGCCCACCGCCCGGGGGTTCTTTTTTCGGCAGGCCCGTATCCCCCGGCt > 1:276236/1‑135 (MQ=255) agccagccAGTGCTTTGCTCCGGCGCTGGCAAGGCTGTCACGGGAAGTCCTCAAGGGCTTTCGCTTGGCCCCGGGC‑GTCTTCCCCAGCGCCCGGGGTTTGGTTTTTCGTCAGGCACGTATCCCCcgtctgcgtctg > 7:56524/1‑136 (MQ=255) agccagccAGTGCTTTGCTCCGGCGCTGGCAAGGCTGTCACGGGAAGTCCTCAAGGGCTTTCGCTTGGCCCCGGGC‑GTCTTCCCCAGCGCCCGGGGTTTCTTTTTTCGGCAGGCACCTATACCCCGTGTGCTTca > 6:206615/1‑134 (MQ=255) ccagccagTGCTTTGCTCCGGCGCTGGCAAGGCTGTCACGGGAAGTCCTCAAGGGCTTTCGCTTGGCCCCGGGC‑GTGGTCCCCACCCCCCGGGGGTTGGTTTTTCGGGCGGCCCGGATACCCCCGCTGCGTCTgg > 5:113893/1‑134 (MQ=255) aggcagTGCTTGGCTCGGGCGCTGGCAAGGGTGTCTCGGGAAGTCCTCAAGGGGTTTCGCTTGGCCCCGGGC‑GTATTCCCCAGCGCCGGGGGGTTGTTTTTTCGGCAGGCACGTATCCCGCGTCTGCTTCTGCaa < 4:250385/132‑1 (MQ=255) agccagTGCTTTGCTCCGGCGCTGGCAAGGCTGTCACGGGAAGTCCTCAAGGGCTTTCGCTTGGCCCCGGGT‑GTCTTCCCCAGCGCCCGGGGTTTCTTTTTTCGGCAGGCACGTATCCCCCGTCTGCTTCTGCaa > 5:2499/1‑135 (MQ=255) agccagTGCTTTGCTCCGGCGCTGGCAAGGCTGTCACGGGAAGTCCTCAAGGGCTTTCGCTTGGCCCCGGGC‑GTGTTCCCCAGCGCCCGGGGGGTCTTTTTTCGGCAGGCACGTATCCCCCGTCTGCTTCTGCaa > 4:284931/1‑135 (MQ=255) agccagTGCTTTGCTCCGGCGCTGGCAAGGCTGTCACGGGAAGTCCTCAAGGGCTTTCGCTTGGCCCCGGGC‑GTGGTCCCCAGCGGCCGGGGTTTCGTTTTTGGGGCGGGGCGTTGCCCCCGTCAGGGTCTGCCAc > 7:96589/1‑136 (MQ=255) agccagTGCTTTGCTCCGGCGCTGGCAAGGCTGTCACGGGAAGTCCTCAAGGGCTTTCGCTTGGCCCCGGGC‑GTCTTCCCCCGCGCCCGGGGTGTCTTTTTTCGGCAGGCACGTATCCCCCGTCTGCTTCTGCAAc > 8:247633/1‑136 (MQ=255) agccagTGCTTTGCTCCGGCGCTGGCAAGGCTGTCACGGGAAGTCCTCAAGGGCTTTCGCTTGGCCCCGGGC‑GTCTTCCCCAGCGCCCGGGGTTTGTTTTTTAGGCCGGCACGTATCCCCCGTCTGCTTCTGGaa > 6:243424/1‑135 (MQ=255) agccagTGCTTTGCTCCGGCGCTGGCAAGGCTGTCACGGGAAGTCCTCAAGGGCTTTCGCTTGGCCCCGGGC‑GTCTTCCCCAGCGCCCGGGGTTTCTTTTTTCg > 3:380530/1‑104 (MQ=255) agccagTGCTTTGCTCCGGCGCTGGCAAGGCTGTCACGGGAAGTCCTCAAGGGCTTTCGCTTGGCCCCGGGC‑GTCTTCCCCAGCGCCCGGGGTTTCTTTTTTCg < 4:380530/104‑1 (MQ=255) agccagTGCTTTGCTCCGGCGCTGGCAAGGCTGTCACGGGAAGTCCTCAAGGGCTTTCGCTTGGCCCCGGGC‑GTCTTCCCCAGCGCCCGGGGTTTCTTTTTTCGGGAGGCACGTATACCCCGTCTGGttgttgaa > 2:141557/1‑129 (MQ=255) agccagTGCTTTGCTCCGGCGCTGGCAAGGCTGTCACGGGAAGTCCTCAAGGGCTTTCGCTTGGCCCCGGGC‑GTCTTCCCCAGCGCCCGGGGTTTCTTTTTTCGGCAGGCACGTATCCCCCGTCTGCTTCTGCaa > 4:204081/1‑135 (MQ=255) agccagTGCTTTGCTCCGGCGCTGGCAAGGCTGTCACGGGAAGTCCTCAAGGGCTTTCGCTTGGCCCCGGGC‑GTCTTCCCCAGCGCCCGGGGTTTCTTTTTTCGGCAGGCACGTATCCCCCGTCTGCTTCTGCAAc > 8:370781/1‑136 (MQ=255) agccagTGCTTTGCTCCGGCGCTGGCAAGGCTGTCACGGGAAGTCCTCAAGGGCTTTCGCTTGGCCCCGGGC‑GTCTTCCCCAGCGCCCGGGGTTTCTTTTTTCGGCAGGCACGTATCCCCCGTCTGCTTCTGCAAc > 7:372788/1‑136 (MQ=255) agccagTGCTTTGCTCCGGCGCTGGCAAGGCTGTCACGGGAAGTCCTCAAGGGCTTTCGCTTGGCCCCGGGC‑GTCTTCCCCAGCGCCCGGGGTTTCTTTTTTCGGCAGGCACGTATCCCCCGTCTGCTTCTGCAAc > 7:250328/1‑136 (MQ=255) agccagTGCTTTGCTCCGGCGCTGGCAAGGCTGTCACGGGAAGTCCTCAAGGGCTTTCGCTTGGCCCCGGGC‑GTCTTCCCCAGCGCCCGGGGTTTCTTTTTTCGGCAGGCACGTATCCCCCGTCTGCTTCTGCAAc > 8:145635/1‑136 (MQ=255) agccagTGCTTTGCTCCGGCGCTGGCAAGGCTGTCACGGGAAGTCCTCAAGGGCTTTCGCTTGGCCCCGGGC‑GTCTTACCCAGCGCCCGGGGTTTCTTTTTTCGGCCGGCACGTATCCCCCGTCTTCTTCTGCaa > 2:296713/1‑135 (MQ=255) agccagTGCTTTGCTCCGGCGCTGGCAAGGCTGTCACGGGAAGTCCTCAAGGGCTTTCGCTTGGCCCCGGGC‑GTCGTCCCCCGCCCCCGGGGTGTCTTTTTTCGGCAGGCACGTATCCCCCGTATGCTTCTGCaa > 4:146839/1‑135 (MQ=255) agccagTGCTTTGCTCCGGCGCTGGCAAGGCTGTCACGGGAAGTCCTCAAGGGCTTTCGCTTGGCCCCGGGC‑GTCATCCCCAGCGCCCGGGGTTTCTTTTTTGGGCAGGCACGTATCCCCCGTCTGCTTCTGCaa > 3:175238/1‑135 (MQ=255) agccagTGCTTTGCTCCGGCGCTGGCAAGGCTGTCACGGGAAGTCCTCAAGGGCTTTCGCTTGGCCCCGGGC‑GGCTTCCCCAGCGCCCCGGGTTTGGTTTTTGGGCAGGCACGTATGCCCCGTCTGCTTCTGCAAc > 8:369056/1‑136 (MQ=255) agccagTGCTTTGCTCCGGCGCTGGCAAGGCTGGCACGGGAAGTCCTCAAGGGCTTTCGCTTGGCCCCGGGC‑GTCGTCCCCAGCGCCCGGGGGGTCTTTGTTCGGCAGGCCCGTCTCCCCCGGCTGCTGCGGCaa > 4:22738/1‑135 (MQ=255) gccagTGCTTTGCTCCGGCGCTGGCAAGGCTGTCACGGGAAGTCCTCAAGGGCTTTCGCTTGGCCCCGGGC‑GTCTTCCCCAGCGCCCGGGGTTTCTTTTTTCGGCAGGCACGTATCCCCCGTCTGCTTCTGCAAc < 5:194606/135‑1 (MQ=255) ccagTGCGTTGCTCCGGCGCTGGCAAGGCTGTCACGGGAAGTCCTCAAGGGCTTTCGCTTGGCCCCGGGC‑GTCTTCCCCAGCGCCCGGGGTTTCTTTTTTCGGCAGGCACGTATCCCCCGTCTGCTTCTGCAACg < 5:243424/135‑1 (MQ=255) cagTGCTTTGCTCCGGCGCTGGCAAGGCTGTCACGGGAAGTCCTCAAGGGCTTTCGCTTGGCCCCGGGC‑GTCTTCCCCAGCGCCCGGGGTTTCTTTTTTCGGCAGGCACGTATCCCCCGTCTGCTTCTGCAACGa < 2:289005/135‑1 (MQ=255) cTTTGCTCCGGCGCTGGCAAGGCTGTCACGGGAAGTCCTCAAGGGCTTTCGCTTGGCCCCGGGC‑GTCTTCCCCAGCGCCCGGGGTTTCTTTTTTCGGCAGGCACGTATCCCCCGTCTGCTTCTGCAACGACCGTg < 4:44065/135‑1 (MQ=255) cTTTGCTCCGGCGCTGGCAAGGCTGTCACGGGAAGTCCTCAAGGGCTTTCGCTTGGCCCCGGGC‑GTCTTCCCCAGCGCCCGGGGTTTCTTTTTTCGGCAGGCACGTATCCCCCGTCTGCTTCTGCAACGACCGTg < 7:145635/135‑1 (MQ=255) tttGCTCCGGCGGTGGCAAGGGTGGCAGGGGAAGGCCTCATGGGCTTTCGCTTGGCCCCGGGC‑GTCTTCCCCAGCGCCCGGGGTTTCTTTTTTCGGCAGGCACGTAACCCCCGTCTGATTCTTAAACGACCGTg < 1:137573/134‑1 (MQ=255) tttGCTCCGGCGCTGGCAAGGCTGTCACGGGAAGTCCTCACGGGCTTTCGCTTGGCCCCGGGC‑GTCTTCCCCAGCGCCCGGGGTTTCTTTTTTCGGCAGGCACGTATCCCCCGTCTGCTTCTGCAACGACCGTGc < 5:371546/135‑1 (MQ=255) tttGCTCCGGCGCTGGCAAGGCTGTCACGGGAAGTCCTCAAGGGCTTTCGCTTGGCCCCGGGC‑GTCTTCCCCAGCGCCCGGGGTTTCTTTTTTCGGCAGGCACGTATCCCCCGTCTGCTTCTGCAACGACCGTGc < 5:120374/135‑1 (MQ=255) tttGCTCCGGCGCTGGCAAGGCTGTCACGGGAAGTCCTCAAGGGCTTTCGCTTGGCCCCGGGC‑GTCTTCCCCAGCGCCCGGGGTTTCTTTTTTCGGCAGGCACGTATCCCCCGTCTGCTTCTGCAACGACCGTGc < 3:204081/135‑1 (MQ=255) tttGCTCCGGCGCTGGCAAGGCTGTCACGGGAAGTCCTCAAGGGCTTTCGCTTGGCCCCGGGC‑GTCTTCCCCAGCGCCCGGGGGTTGGTTTTTCGGCAGGCACGTATCCCCCGTCTGCTTCTGGCACGACCCTGc > 6:297476/1‑135 (MQ=255) tCCGGCGCTGGCAAGGCTGTCACGGGAAGTCCTCAAGGGCTTTCGCTTGGCCCCGGGC‑GTCTTCCCCAGCGCCCGGGGTTTCTTTTTTCGGCAGGCACGTATCCCCCGTCTGCTTCTGCAACGCCCGTGGATACg > 4:104093/1‑135 (MQ=255) tCCGGCGCTGGCAAGGCTGTCACGGGAAGTCCTCAAGGGCTTTCGCTTGGCCCCGGGC‑GTCTTCCCCAGCGCCCGGGGTTTCTTTTTTCGGCAGGCACGTATCCCCCGTCTGCTTCTGCAACGACCGTGCATACg < 3:196651/135‑1 (MQ=255) gcgcTGGCAAGGCTGTCACGGGAAGTCCTCAAGGGCTTTCGCTTGGCCCCGGGC‑GTCTTCCCCAGCGCCCGGGGTTTCTTTTTTCGGCAGGCACGTATCCCCCGTCTGCTTCTGCAACGACCGTGCATACGGGtt < 5:223599/135‑1 (MQ=255) cgcTGGCAAGGCTGTCACGGGAAGTCCTCAAGGGCTTTCGCTTGGCCCCGGGC‑GTCGTCCCCCGCGCCCGGGGGTTGGTTTTTCGGCAGGCCCGTATCCCCCGGCTGCTTCTGCAACGACCGGGGATACGGGGTg > 6:396660/1‑135 (MQ=255) cgcTGGCAAGGCTGTCACGGGAAGTCCTCAAGGGCTTTCGCTTGGCCCCGGGC‑GTCGTACCCCCCGCCCGGGGTTTGTTTTTTCGGCCGGCACGTTAGCCCCCTCTTCATATGCAACCAACGTTCATACGGGTTg > 3:161224/1‑135 (MQ=255) gcTGTCAAGGCTGTCACGGGAAGTACTCAAGGGCTTTCGCTTGGCCCCGGGC‑GTCTTCCCCAGCGCCCGGGGTTTCTTTTTTCGGCAGGCACGTATCCCCCGTCTGCTTCTGCAACGACCGTGCATACGGGTTgg < 1:303516/135‑1 (MQ=255) cTGGCAAGGCTGTCACGGGAAGTCCTCAAGGGCTTTCGCTTGGCCCCGGGC‑GTCTTCCCCAGCGCCCGGGGTTTCTTTTTTCGGCAGGCACGTATCCCCCGTCTGCTTCTGCAACGCCCGTGCATACGGGTTGGGc > 7:58865/1‑136 (MQ=255) cTGGCAAGGCTGTCACGGGAAGTCCTCAAGGGCTTTCGCTTGGCCCCGGGC‑GTCTTACCCCGCCCCCCGGGGTTCTTTTTTAGGCAGGCACGTATCCCCCGACGGCGTCTGCAAAGCCCGTGCATACGGGGTggg > 1:302475/1‑135 (MQ=255) ggCTGTCACGGGAAGTCCTCAAGGGCTTTCGCTTGGCCCCGGGC‑GTCTTCCCCAGCGCCCGGGGTTTCTTTTTTCGGCAGGCACGTATCCCCCGTCTGCTTCTGCAACGACCGTGCATACGGGTTGGGCTTAttt < 2:2861/135‑1 (MQ=255) gatgTCCTCAAGGGCTTTCGGTTGGCCCCGGGC‑GTCTTCCCCAGCGCCGGGGGTTTATTTTTTCGGCAGGCAGGTATCCCCGGTTTGCTTGTGCAACGACCGTGCTTACGGGTTGGGCTTATTTGTCCTCaaata < 6:113893/132‑3 (MQ=255) ccTCAAGGGCTTTCGCTGGGCCCCGGGC‑GTCTTCCCCCGCGCCCGGGGTTTCTTTTTTCGGCAGGCACGTATCCCCCGTCTGCTTCTGCAACGACCGTGCATACGGGTTGGGCTTATTTGTCCTCAAAGACACGc < 2:161288/135‑1 (MQ=255) cTCAAGGGCTTTCGCTTGGCCCCGGGC‑GTCTTCCCCAGCGCCCGGGGTTTCTTTTTTCGGCAGGCACGTATCCCCCGTCTGCTTCTGCAACGACCGTGCATACGGGTTGGGCTTATTTGTCCTCAAAGAAACGCCg < 8:250328/136‑1 (MQ=255) tCAAGGGCTTTCGCTTGGCCCCGGGC‑GTCTTCCCCAGCGCCCGGGGTTTCTTTTTTCGGCAGGCACGTATCCCCCGTCTGCTTCTGCAACGACCGTGCATACGGGTTGGGGTTATTTGTCCTCAAAGAAACGCCg < 4:175238/135‑1 (MQ=255) tCAAGGGCTTTCGCTTGGCCCCGGGC‑GTCTTCCCCAGCGCCCGGGGTTTCTTTTTTCGGCAGGCACGTATCCCCCGTCTGCTTCTGCAACGACCGTGCATACGGGTTGGGCTTATTTGTCCTCAAAGAAACGCCgg > 7:22212/1‑136 (MQ=255) tCAAGGGCTTTCGCTTGGCCCCGGGC‑GTCTTCCCCAGCGCCCGGGGTTTCTTTTTGCGGCAGGCACTTATCCCCCGGCTGCTGCTGCAACGACCGTGCATACGGGTTGGGCTTATTTGTCCTCAAAGAAACGCCg < 2:393092/135‑1 (MQ=255) tCAAGGGCTTTCGCTTGGCCCCGGGC‑GTCTTCCCCAGCGCCCGGGGGTTCTTTTTTCGGCAGGCACGTATCCCCCGGCTGCTTCTGCAACGCCCGTGCATACGGGTTGGGCTTATTTGTCCTCAAAGAAACGCCg > 2:37658/1‑135 (MQ=255) tCAAGGGCTTTCGCTGGGCCCCGGGC‑GTCTTCCCCAGCGCCCGGGGTTTCTTTTTTCGGCCGGCACGTATCCCCCGTCTGCTTCTGCAACGACCGTGCATACGGGTTGGGCTTATTTGTCCTCAAAGAAACGCCg < 6:122804/135‑1 (MQ=255) tcggggTTGCGCTGGGCCCGGGGC‑GGCTTCCCCCGCGCCGGGGTTTTGTTTTTTCGGCTGGCACTTATCCCCCGTCTGATGCTCAAACGACCGTGCATACGGGTTGGGCTTATTTGACCTCAAATAAACGCCGGc < 2:216516/133‑1 (MQ=255) gggCTTTCGCTTGGCCCCGGGC‑GTCTTCCCAAGCGCCCGGGGTTTATTTTTTCGGCAGGCACGTATCCCCCGTCTGCTTCTGCAACGACCGTGCATACGGGTTGGGCTTATTTGTCCTCAAAGAAACGCCGGCtt < 1:296713/135‑1 (MQ=255) tCGCTTGGCCCCGGGC‑GTCTTCCCCAGCGCCCGGGGTTTCTTTTTTCGGCAGGCACGTATccccc > 7:149282/1‑65 (MQ=255) tCGCTTGGCCCCGGGC‑GTCTTCCCCAGCGCCCGGGGTTTCTTTTTTCGGCAGGCACGTATccccc < 8:149282/65‑1 (MQ=255) tCGCTTGGCCCCGGGC‑GTCTTCCCCAGCGCCCGGGGGTTCTTTTTTCGGCAGGCACGTATCCCCCGTCTGCTTCTGCAACGACCGTGCAGACGGGTTGGGCTTATTTGTCCTCAAAGAAACGCCGGCTTTCCTg > 8:360680/1‑134 (MQ=255) cGCTTGGCCCCGGGC‑GTCTTCCCCAGCGCCCGGGGGTTATTTTTTAGGCAGGCACGTATCCCCCCTCTGCTTATGCAACGCCCGTGCATACGGGTTGGGCGTATTTTTCCTCAAAGAAACGCCCGCGTTCCTg > 7:231355/1‑133 (MQ=255) gCTTGGCCCCGGGC‑GTCTTCCCCAGCGCCCGGGGTTTCTTTTTTCGGCAGGCACGTATCCCCCGTCTGCTTCTGCAACGACCGTGCATACGGGTTGGGCTTATTTGTCCTCAAAGAAACGCCGGCTTTCCt > 4:197633/1‑131 (MQ=255) gCTTGGCCCCGGGC‑GTCTTCCCCAGCGCCCCGGGTTTCTTTTTTCGGCAGGCACGTATCCCCCGTCTGCTTCTGCAACGACCGTGCATACCGGGTGGGCTTATTTGTCCTCAAAGAAACGCCCGCTTTGCt > 3:148354/1‑131 (MQ=255) cTTGGCCCCGGGC‑GTCTTCCCCAGCGCCCGGGGGTTGTTTTTTCGGCAGGCACGTATACCCCGTCTGCTTCGGCAACGACCGTGCATACGGGTTGGGGTTATTTGTCCTCAAAGAAACGCCGGCTTTCCTGTAGa > 2:4753/1‑135 (MQ=255) ggc‑ggcTTCCCCTGCGCCGGGGTTTTCTTTTTTGGGAAGGCCGGTATCCCCGGTCTGCTTCTGCAACCACCGTGCATACGGGTTTGGGTTATTTGGCCTCAAAGAAACGCCGGCTTTCCTGTAGATAGTCTtctc < 5:297476/135‑1 (MQ=255) tCTTCCCCAGCGCCCGGGGTTTCTTTTTTCGGCAGGCACGTATCCCCCGTCTGCTTCTGCAACGACCGTGCATACGGGTTGGGCTTATTTGTCCTCAAAGAAACGCCGGCTTTCCTGTAGATAGTCTTCTCGCaa < 2:302475/135‑1 (MQ=255) gttCCCCAGCGCCCGGGGTTACTTTTTTCGGCAGGCACGTATCCCCCGTCTGCTGCTGCAACGACCGTGCATACGGGTTGGGCTTATTTGTCCTCAAAGACACGCCGGCTTTCCTGTAGATAGTCTTCTCGCAATg < 8:1955/135‑1 (MQ=255) ccccAGCGCCCGGGGTTTCTTTTTTCGGCAGGCACGTATCCCCCGTCTGCTTCTGCAACGACCGTGCATACGGGTTGGGCTTATTTGTCCTCAAAGAAACGCCGGCTTTCCTGTAGATAGTCTTCTCGCAATg > 5:149247/1‑133 (MQ=255) cacgcgcCCGGTGTTTCTTTTTTGGGCTGCCACGTATCCCCCTGCTGCTTCTGAAACGACCGTGCATACGGTTTGGGCTTATTTGTCTTCAAAGATACGCCGGCTTTCCTGTAGATAGTCTTCTCTCAATGCCAg < 3:330718/132‑1 (MQ=255) cgcCCGGGGTTTCTTTTTTCGGCAGGCACGTATCCCCCGTCTGCTTCTGCAACGACCGTGCATACGGGTTGGGCTTATTTGTCCTCAAAGAAACGCCGGCTTTCCTGTAGATAGTCTTCTCGCAATGCCAGGt > 1:246166/1‑133 (MQ=255) cgcCCGGGGTTTCTTTTTTCGGCAGGCACGTATCCCCCGTCTGCTTCTGCAACGACCGTGCATACGGGTTGGGCTTATTTGTCCTCAAAGAAACGCCGGCTTTCCTGTAGATAGTCTTCTCGCAATGCCAGGTcc > 1:157368/1‑135 (MQ=255) gcCCGGGGTTTCTTTTTTCGGCAGGCACGCATCCCCCGCCTGCGTCTCCAACGACCGTGCATACGGGTGGGGCTTATTTGGCCTCAAAGACACGCCGGCTTTCCTGTAGATAGTCTTCTCGCAATGCCAGGTcca < 5:396660/135‑1 (MQ=255) ccGGGGTTTCTTTTTTCGGCAGGCACGTATCCCCCGTCTGCTTCTGCAACGACCGTGCATACGGGTTGGGCTTATTTGTCCTCAAAGAAACGCCGGCTTTCCTGTAGATAGTCTTCTCGCAATGACAGGTccag > 6:115873/1‑134 (MQ=255) gggTTTCTTTTTTCGGCTGGCACGTATCCCCCGTCTGCTTCTTCAACGACCGTGCATACGGGTTGGGCTTATTTGTCCTCAAAGACACGCCGGCTTTCCTGTAGATAGTCTTCTCGCAATGCCAGGTccagccag < 1:141557/135‑1 (MQ=255) gggTTTATTTTTGCGGCCGGCCCGTATCCCCCGTCTGCTTCTGCAACGACCGTGCATACGGGTTGGGCTTATTTGTCCTCAAAGAAACGCCGGCTTTCCTGTAGATAGTCTTCTCGCAATGCCAGGTccagccag < 6:379619/135‑1 (MQ=255) cTTTTTTCGGCAGGCACGTATCCCCCGTCTGCTTCTGAAACGACCGTGCATACGGGTTGGGCTTATTTGTCCTCAAAGAAACGCCGGCTTTCCTGTAGATAGTCTTCTCGCAATGCCAGGTCCAGCCAGCGGGc < 4:173845/134‑1 (MQ=255) | CCTGAGTGGTTCATCAGACAGTGTAAGGGCAGCCAGCCAGTGCTTTGCTCCGGCGCTGGCAAGGCTGTCACGGGAAGTCCTCAAGGGCTTTCGCTTGGCCCCGGGC‑GTCTTCCCCAGCGCCCGGGGTTTCTTTTTTCGGCAGGCACGTATCCCCCGTCTGCTTCTGCAACGACCGTGCATACGGGTTGGGCTTATTTGTCCTCAAAGAAACGCCGGCTTTCCTGTAGATAGTCTTCTCGCAATGCCAGGTCCAGCCAGCGGGC > KT2440/1671570‑1671832 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |