| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | KT2440 | 1,729,011 | T→G | 25.8% | Q190P (CAG→CCG) | csdA ← | Cysteine desulfurase CsdA |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | KT2440 | 1,729,011 | 0 | T | G | 25.8% | 89.0 / 4.3 | 76 | Q190P (CAG→CCG) | csdA | Cysteine desulfurase CsdA |
| Reads supporting (aligned to +/- strand): ref base T (14/34); new base G (17/3); total (39/37) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 3.37e-05 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
CACGCCGACGCCGTCCGGACCGTACAGCTTGTGGCTGGAAAACACATAGAAGTCGCAGCCCAGTTGCTGCATGTCCTGGCGACCATGCACCACGCCCTGGGCACCATCGACCACCGTCAGCGCGCCCTGGGC‑GCGGGCATGGGCCAGCAGCGCTGGCAG‑CGGTTGCCAGGTACCCAGCACGTTGGACAGCTGGCTGATGGCGAGCACTCGGGTGCGCGGGCCGATCAGTTGCAGTGCCTGGTCCTGGTCGATACGACCAT > KT2440/1728884‑1729143 | cACGCCGACGCCGGCCGGACCGTACAGCTTGTGGCTGGAAAACACATAGAAGTCGCAGCCCAGTTGCTGCATGTCCTGGCGACCATGCACCACGCCCTGGGCACCATCGACCACCGTCAGCGCGCCCTGGGC‑GCgg < 8:395323/136‑1 (MQ=255) acgccgacgccgTCCGGACCGTACAGCTTGTGGCGGGAAAACACATAGAAGTCGCAGCCCAGTTGCTGCATGTCCTGGCGACCATGCACCACGCCCTGGGCACCATCGACCACCGTCAGCGCGCCCTGGGC‑GCgg < 4:138135/135‑1 (MQ=255) gccgacgccgTCCGGACCGTACAGCTTGTGGCTGGAAAACACATAGAAGTCGCAGCCCAGTTGCTGCATGTCCTGGCGACCATGCACCACGCCCTGGGCCCCCTCGACCACCGTCAGCGCGCCCAGGGC‑GCggggc > 8:294484/1‑134 (MQ=255) gccgacgccgTCCGGACCGTACAGCTTGTGGCTGGAAAACACATAGAAGTCGCAGCCCAGTTGCTGCATGTCCTGGCGACCATGCACCACGCCCTGGGCACCATCGACCACCGTCAGCGCGCCCTGGGC‑GCGGGCa < 8:423626/136‑1 (MQ=255) cgacgccgTCCGGACCGTACAGCTTGTGGCTGGAAAACACATAGAAGTCGCAGCCCAGTTGCTGCATGTCCTGGCGACCATGCACCACGCCCTGGGCACCCTCGACCACCGTCAGCGCCCCCTGGGC‑GCGGGCagg > 8:382971/1‑134 (MQ=255) cgacgccgTCCGGACCGTACAGCTTGTGGCTGGAAAACACATAGAAGTCGCAGCCCAGTTGCTGCATGTCCTGGCGACCATGCACCACGCCCTGGGCACCATCGACCACCGTCAGCGCGCCCTGGGG‑GCGGGCATg > 7:251614/1‑136 (MQ=255) cgacgccgTCCGGACCGTACAGCTTGTGGCTGGAAAACACATAGAAGTCGCAGCCCAGTTGCTGCATGTCCTGGCGACCATGCACCACGCCCTGGGCACCATCGACCACCGTCAGCGCGCCCGGGGG‑GCCGGCAtt > 8:34711/1‑135 (MQ=255) cgacgccgTCCGGACCGTACAGCTTGTGGCTGGAAAACACATAGAAGTCGCAGCCCAGTTGCTGCATGTCCTGGCGACCATGCACCACGCCCTGGGCACCATCGACCACCGTCAGCGCGCCCAGGGC‑GCGGGCAt > 5:126880/1‑135 (MQ=255) gacgccgTCCGGACCGTACAGCTTGTGGCTGGAAAACACATAGAAGTCGCAGCCCAGTTGCTGCATGTCCTGGCGACCATGCCCCACGCCCTGGGCACCCTCGACCACCGTCAGCGCGCCCAGGGCGGCGGGctgg > 8:392596/1‑133 (MQ=255) ccgTCCGGACCGTACAGCTTGTGGCTGGAAAACACATAGAAGTCGCAGCCCAGTTGCTGCATGTCCTGGCGACCATGCACCACGCCCTGGGCACCATCGACCACCGTCAGCGCGCCCTGGGC‑GCGGGCATGGGcc < 6:26582/135‑1 (MQ=255) cgTCCGGACCGTACAGCTTGTGGCTGGAAAACACATAGAAGTCGCAGCCCAGTTGCTGCATGTCCTGGCGACCATTCCCCACGCCCTGGGCCCCATCGCACACCGTCAGGGCGACCGGGTC‑GGGGTCGTGGGGcag > 8:288350/1‑136 (MQ=255) cgTCCGGACCGTACAGCTTGTGGCTGGAAAACACATAGAAGTCGCAGCCCAGTTGCTGCATGTCCTGGCGACCATGCACCACGCCCTGGGCACCATCGACCACCGTCAGCGCGCCCTGGGC‑GCGGGCATGGGccc > 4:189850/1‑134 (MQ=255) ggACCGTACAGCTTGTGGCTGGAAAACACATAGAAGTCGCAGCCCAGTTGCTGCATGTCCTGGCGACCATGCACCACGCCCTGGGCACCATCGACCACCGTCAGCGCGCCCGGGGC‑GCGGGCCTGGGCCcgccgc > 5:429973/1‑135 (MQ=255) ggACCGTACAGCTTGTGGCTGGAAAACACATAGAAGTCGCAGCCCAGTTGCTGCATGTCCTGGCGACCATGCACCACGCCCTGGGCACCATCGACCACCGTCAGCGCCCCCAGGGC‑GCGGGCATGGGCCcgcagc > 4:409146/1‑135 (MQ=255) aCCGTACAGCTTGTGGCTGGAAAACACATAGAAGTCGCAGCCCAGTTGCTGCATGTCCTGGCGACCATGCACCACGCCCTGGGCACCATCGACCACCGTCAGCGCGCCCTGGGC‑GCGGGCATGGGCCAGCAgcgc < 1:275999/135‑1 (MQ=255) cAGCTTGTGGCTGGAAAACACATAGAAGTCGCAGCCCAGTTGCTGCATGTCCTGGCGACCATGCACCACGCCCTGGGCACCATCGACCACCGGCAGCGCGCCCTGGGC‑GCGGGCATGGGCCAGCAGCGCTGGCAg < 7:34711/135‑1 (MQ=255) aGCTTGTGGCTGGAAAACACATAGAAGTCGCAGCCCAGTTGCTGCATGTCCTGGCGACCATGCACCACGCCCTGGGCACCATCGACCACCGTCAGCGCGCCCTGGGC‑GCGGGCATGGGCCAGCAGCGCTGGCAG‑Cg > 8:290765/1‑136 (MQ=255) gCTCGTGGCTGGAAAACACTCAGACGTCGCCGCCCAGGTGCGGCATGTCCTGGCGACCATGCACCCCGCCCTGGGCACCATCGACCACCGGCAGCGCGCCCTGGGC‑GCGGGCATGGGCCAGCAGCGCTGGCAG‑Cg < 4:256483/135‑1 (MQ=255) gtgGCTGGAAAACACATAGAAGTCGCAGCCCAGTTGCTGCATGTCCTGGCGACCATGCACCACGCCCTGGGCACCATCGACCACCGTCAGCGCCCCCTGGGC‑CCGGGCAGGGGCCAGCAGCGCAGGCAG‑CGGTTg > 1:236356/1‑135 (MQ=255) ggCTGGAAAACACATAGAAGTCGCAGCCCAGTTGCTGCATGTCCTGGCGACCATGCACCACGCCCTGGGCACCATCGACCACCGTCAGCGCGCCCTGGGC‑GCGGGCATGGGCCAGCAGCGCTGGCAG‑CGGTTGc < 4:387912/134‑1 (MQ=255) ggCTGGAAAACACATAGAAGTCGCAGCCCAGTTGCTGCATGGCCTGGCGACCATGCACCACGCCCTGGGCACCATCGACCACCGGCAGCGCGCCCTGGGC‑GCGGGCATGGGCCAGCAGCGCTGGCAG‑CGGTTGc < 5:34896/134‑1 (MQ=255) gCTGGAAAACACATAGAAGTCGCAGCCCAGTTGCTGCATGTCCTGGCGACCATGCACCACGCCCTGGGCCCCATCGACCACCGTCAGCGCGCCCGGGGC‑GCGGGCCTGGGCCCGCCCCGCGGGCCG‑CCGTTGGCa > 1:117055/1‑135 (MQ=255) gCTGGAAAACACATAGAAGTCGCAGCCCAGTTGCTGCATGTCCTGGCGACCATGCACCACGCCCTGGGCACCATCGCCCACCGTCAGCGCGCCCTGGGC‑GCGGGCCTGGGCCAGCAGCGCTGGCAG‑AGGTTGccc > 2:96009/1‑134 (MQ=255) gCTGGAAAACACATAGAAGTCGCAGCCCAGTTGCTGCATGTCCTGGCGACCATGCACCACGCCCTGGGCACCATCGACCACCGTCAGCGCGCCCGGGGC‑GCGGGCATGGGCCAGCAGCGCTGGCAG‑CGGTTGCCAg > 7:351344/1‑136 (MQ=255) cTGGAAAACACATAGAAGTCGCAGCCCAGTTGCTGCATGTCCTGGCGACCATGCACCACGCCCTGGGCACCATCGACCACCGTCAGCGCGCCCTGGGC‑GCGGGCATGGGCCAGCAGCGCTGGCAG‑CGGTTGCCAg < 3:362643/135‑1 (MQ=255) tGGAAAACACATAGAAGTCGCAGCCCAGTTGCTGCATGTCCTGGCGACCATGCACCCCGCCCTGGGCACCATCGACCACCGTCAGCGCGCCCTGGGC‑GCGGGCATGGGCCAGCAGCGCTGGCAG‑CGGGTGCCAg > 2:291591/1‑134 (MQ=255) tGGAAAACACATAGAAGTCGCAGCCCAGTTGCTGCATGTCCTGGCGACCATGCACCACGCCCTGGGCACCATCGCCCACCGTCAGCGCGCCCAGGGC‑GCGGGCCTGGGCCAGCAGCGCTGGCCC‑CGGTTGCCAg > 2:345262/1‑134 (MQ=255) tGGAAAACACATAGAAGTCGCAGCCCAGTTGCTGCATGTCCTGGCGACCATGCACCACGCCCTGGGCACCATCGACCACCGTCAGCGCGCCCGGGGC‑GCGGGCCTGGGCCCGCCGCGCTGGCAG‑CGGGTGCCAgg > 3:151173/1‑135 (MQ=255) tGGAAAACACATAGAAGTCGCAGCCCAGTTGCTGCATGTCCTGGCGACCATGCACCACGCCCTGGGCACCATCGACCACCGTCAGCGCGCCCCGGGC‑GCCGGGAAGGGCCCCCAGCGCAGGCCG‑CGGGTGCCac > 2:325019/1‑133 (MQ=255) tGGAAAACACATAGAAGTCGCAGCCCAGTTGCTGCATGTCCTGGCGACCATGCACCACGCCCTGGGCACCATCGACCACCCTCAGCCCGCCCGGGGG‑GCGGGCCTGGGCCCCCAGCGCAGGCCGCCGGTTGcagg > 1:335836/1‑132 (MQ=255) gAAAACACATAGAAGTCGCAGCCCAGTTGCTGCATGTCCTGGCGACCATGCACCACGACCTGGGGACCATCGACCACCGTCAGCGCGCCCTGGGC‑GCGGGCATGGGCCAGCAGCGCTGGCAG‑CGGTTGCCAGGTAc < 8:311324/136‑1 (MQ=255) aaaaCACATAGCAGTCGCAGCCCAGTTGCTGCATGGCCTGGCGACCATGCACCACGCCCTGGGCACCATCGACCACCGTCAGCGCGCCCTGGGC‑GCGGGCATGGGCCAGCAGCGCTGGCAG‑CGGTTGCCAGGTAc < 3:397068/135‑1 (MQ=255) aaaaCACATAGAAGTCGCAGCCCAGTTGCTGCATGTCCTGGCGACCATGCACCACGCCCTGGGCACCATCGACCACCGTCAGCGCGCCCTGGGC‑GCGGGCATGGGCCAGCAGCGCTGGCAG‑CGGTTGCCAGGt < 4:33329/133‑1 (MQ=255) aaaaCACATAGAAGTCGCAGCCCAGTTGCTGCATGTCCTGGCGACCATGCACCACGCCCTGGGCACCATCGACCACCGTCAGCGCGCCCTGGGC‑GCGGGCATGGGCCAGCAGCGCTGGCAG‑CGGTTGCCAGGTAc < 4:60889/135‑1 (MQ=255) aaCACATAGAAGTCGCAGCCCAGTTGCTGCATGTCCTGGCGACCATGCACCACGCCCTGGGCACCATCGACCACCGTCAGCGCGCCCTGGGC‑GCGGGCATGGGCCAGCAGCGCTGGCAG‑CGGTTGCCAGGTAccc > 4:176134/1‑135 (MQ=255) aaCACATAGAAGTCGCAGCCCAGTTGCTGCATGTCCTGGCGACCATGCACCACGCCCTGGGCACCATCGACCACCGTCAGCGCGCCCGGGGC‑GCGGGCCAGGGCCCGCAGCGCGGGCCG‑CGGGTGCCACGTACCCa > 8:75043/1‑136 (MQ=255) aaCACATAGAAGTCGCAGCCCAGTTGCTGCATGTCCTGGCGACCATGCACCACGCCCTGGGCACCATCGACCACCGTCAGCCCGCCCGGGGG‑GGCGGCATGGGCCAGCCGCGCTGGCCG‑CCGTTTCCAGGTAACCa > 8:183545/1‑136 (MQ=255) aaCACATAGAAGTCGCAGCCCAGTTGCTGCATGTCCTGGAGACCATGCACCACGCCCTGGGCACCATCGACCACCGTCAGCGCCACAAGGGC‑GCGCGCAAGGGCCATCCCAGCAGGGAG‑CGGTTGCCAGGAAccc > 1:22761/1‑135 (MQ=255) acacATAGAAGTCGCAGCCCAGTTGCTGCATGTCCTGGCGACCATGCACCACGCCCTGGGCACCATCGACCACCGTCAGCGCGCCCTGGGC‑GCGGGCATGGGCCAGCAGCGCTGGCAG‑CGGTTGCCAGGTACCCa < 4:98156/135‑1 (MQ=255) aaGTCGCAGCCCAGTTGCTGCATGTCCTGGCGACCATGCACCACGCCCTGGGCACCATCGACCACCGTCAGCGCGCCCTGGGC‑GCGGGCATGGGCCAGCAGCGCTGGCAG‑CGGTTGCCAGGTACCCAGCACGtt < 4:277374/134‑1 (MQ=255) cAGCCCAGTTGCTGCATGTCCTGGCGACCATGCACCACGCCCTGGGCCCCATCGACCCCCGTCAGCGCGCCCGGGGG‑GCGGGGCTGGGCCCGCCGCGCCGGCCG‑CGGGGGGCCGGTGCCCAGCCCCTGGGTCAgc > 3:2494/1‑135 (MQ=255) cAGCCCAGTTGCTGCATGTCCTGGCGACCATGCACCACGCCCTGGGCACCATCGACCACCGTCAGCGCGCCCTGGGC‑GCGGGCATGGGCCAGCCGCGCTGGCAG‑CGGTTGCCACGTACCCAGCACGTTGGACCgct > 8:279629/1‑136 (MQ=255) cAGCCCAGTTGCTGCATGTCCTGGCGACCATGCACAACGCCCTGGGCACCAACGACCCCCGTCATCGCGCCCTCGGC‑GGGGGCATGGGCCCCCAGCCCGGGACC‑CGCTTGGCAGGGACCCCGCACGTGGGGCCgct > 8:170421/1‑136 (MQ=255) cccAGTTGCTGCATGTCCTGGCGACCATGCACCACGCCCTGGGCACCATCGACCCCCGTCAGCGCGCCCGGGGC‑GCGGGCCTGGGCCAGCCGCGCGGGGAG‑CGGTTGCCAGGTACCCCGCACGTTGGGCAgcggg > 3:108135/1‑135 (MQ=255) cccAGTTGCTGCATGTCCTGGCGACCATGCACCACGCCCTGGGCACCATCGACCACCGTCAGCGCGCCCGGGGC‑GCGGGGATGGGCCCGCCGCGCTGGCAG‑CGGTTGCCAGGTACCCAGCACGGTGGACCgcgggc > 7:129330/1‑136 (MQ=255) ttGCTGCATGTCCTGGCGACCATGCACCACGCCCTGGGCACCATCGACCACCGTCAGCGCGCCCTGGGC‑GCGGGCATGGGCCAGCAGCGCTGGCAG‑CGGTTGCCAGGTACCCAGCACGTTGGACAGCTGGCTGAt < 6:177087/135‑1 (MQ=255) ttGCTGCATGTCCTGGCGACCATGCACCACGCCCTGGGCACCATCGACCACCGTCAGCGCGCCCTGGGC‑GCGGGCATGGGCCAGCAGCGCTGGCAG‑CGGTTGCCAGGTACCCAGCACGATGGACAGCTGGCTGAt < 4:290800/135‑1 (MQ=255) gctgcATGTCCTGGCGACCATGCACCACGCCCTGGGCACCATCGCCCACCGTCAGCGCGGCCGGGGC‑GCGGGCCTGGGCCCGCCGCGCTGGCCG‑CGGTTTGCAGGTACCCCGCAAGTTGGACAGAGGGGTGATgg > 2:362497/1‑135 (MQ=255) tGTCCTGGCGACCATGCACCACGCCCTGGGCACCATCGACCACCGTCAGCGCGCCCCGGGC‑GCGGGCCTGGGCCAGCCGCGCGGGCAG‑CGGTTGCCAGGTAACCCGCACGTTGGCCAGCTGGCGGAGGGCGAGcc > 2:380814/1‑134 (MQ=255) ccTGGCGACCATGCACCACGCCCTGGGCACCATCGACCACCGTCAGCGCGCCCTGGGC‑GCGGGCCTGGGCCAGCCGCGGTGGCAG‑CGGTTGCCAGGTACCCAGCACGTTGGCCAGCTGGCTGATGgcgcgcccgcg > 8:297002/1‑131 (MQ=255) tGGCGACCATGCACCACGCCCTGGGCACCATCGACCACCGTCAGCGCGCCCTGGGC‑GGGGGCATGGGCCCGCAGCGCTGGGCG‑CGGTTGCCAGGTACCCAGCACGGTGGACAGCGGGCTGGTGGCGCGCCCGCgg > 6:366324/1‑135 (MQ=255) caccacGCCCTGGGCACCATCGACCACCGTCAGCGCGCCCGGGGC‑GCGGGCATGGGCCAGCAGCGCTGGCAG‑CGGTTGCCAGGTACCCAGCACGTTGGACAGCTGGCTGATGGCGAGCACTCGGGTGCGCGGGCCg < 7:75769/136‑1 (MQ=255) caccacGCCCTGGGCACCATCGACCACCGGCAGCGCGCCCTGGGC‑GCGGGCAGGGGCCAGCAGCGCTGGCAG‑CGGTTGCCAGGTACCCAGCACGTTGGACAGCTGGCTGATGGCGAGCACTCGGGTGCGCGGGcc < 5:267354/135‑1 (MQ=255) accacGCCCTGGGCACCATCGACCACCGTCAGCGCGCCCTGGGC‑GCGGGCATGGGCCAGCAGCGCTGGCAG‑CGGTTGCCAGGTACCCAGCACGTTGGACAGCTGGCTGATGGCGAGCACTCGGGTGCGCGGGcc < 1:267626/134‑1 (MQ=255) cccTGGGCACCATCGACCACCGTCAGCGCGCCCTGGGC‑GCGGGCATGGGCCAGCAGCGCTGGCAG‑CGGTTGCCAGGTACCCAGCACGTTGGACAGCTGGCTGATGGCGAGCACTCGGGTGCGCGGGCCGATCAGtt < 7:290765/136‑1 (MQ=255) cccTGGGCACCATCGACCACCGTCAGCGCGCCCTGGGC‑GCGGGCATGGGCCAGCAGCGCTGGCAG‑CGGTTGCCAGGTACCCAGCACGTTGGACAGCTGGCTGATGGCGAGCACTCGGGTGCGCGGGCCGATCAGt < 6:126880/135‑1 (MQ=255) cccTGGGCACCATCGACCACCGGCAGCGCGCCCTGGGC‑GCGGGCATGGGCCAGCAGCGCTGGCAG‑CGGTTGCCAGGTACCCAGCACGTTGGACAGCTGGCTGATGGCGAGCACTCGGGTGCGCGGGCCGATCAGtt < 7:382971/136‑1 (MQ=255) ccTGGGCACCATCGACCACCGTCAGCGCGCCCTGGGC‑GCGGGCATGGGCCAGCAGCGCTGGCAG‑CGGTTGCCAGGTACCCAGCACGTTGGACAGCTGGCTGATGGCGAGCACTCGGGTGCGCGGGCCGATCAGtt < 4:184574/135‑1 (MQ=255) gggCACCATCGACCACCGTCAGCGCGCCCGGGGC‑GCGGGCATGGGCCAGCAGCGCTGGCAG‑CGGTTGCCAGGTACCCAGCCCGGTGGACCGCTGGCTGATGGCGAGCACTCGGGTGCGCGGGGCGCTCAGTTTCa > 2:431098/1‑135 (MQ=255) ggCACCCTCGACCACCGTCAGCGCGCCCTGGGC‑GCGGGCATGGGCCAGCAGCGCTGGCAG‑CGGTTGCCAGGTACCCAGCACGTTGGACAGCTGGCTGATGGCGAGCACTCGGGTGCGCGGGCCGATCAGTTGCAg < 5:123477/135‑1 (MQ=255) ggCACCATCGACCACCGTCAGCGCGCCCTGGGC‑GCGGGCATGGGCCAGCAGCGCTGGCAG‑CGGTTGCCAGGTACCCAGCACGTTGGACAGCTGGCTGATGGCGAGCACTCGGGTGCGCGGGCCTATCAGTTGCAg < 4:108135/135‑1 (MQ=255) ggCACCATCGACCACCGTCAGCGCGCCCGGGGC‑GCGGGCATGGGCCAGCAGCGCTGGCAG‑CGGTTGCCAGGTACCCAGCACGTTGGACAGCTGGCTGATGGCGAGCACTCGGGTGCGCGGGCCGATCAGTTGCAGt < 8:351344/136‑1 (MQ=255) gCACCATCGACCACCGTCAGCGCGCCCTGGGC‑GCGGGCATGGGCCAGCAGCGCTGGCAG‑CGGTTGCCAGGTACCCAGCACGTTGGACAGCTGGCTGATGGCGAGCACTCGGGTGCGCGGGCCGATCAGTTGCAGt < 3:409146/135‑1 (MQ=255) gCACCATCGACCACCGTCAGCGCGCCCTGGGC‑GCGGGCATGGGCCAGCAGCGCTGGCAG‑CGGTTGCCAGGTACCCAGCACGTTGGACAGCTGGCTGATGGCGAGCACTCGGGTGCGCGGGCCGATCAGTTGCAGt < 3:439690/135‑1 (MQ=255) gCACCATCGACCACCGTCAGCGCGCCCTGGGC‑GCGGGCATGGGCCAGCAGCGCTGGCAG‑CGGTTGCCAGGTACCCAGCACGTTGGACAGCTGGCTGATGGCGAGCACTCGGGTGCGCGGGCCGATCAGTTGCAGt < 5:423450/135‑1 (MQ=255) gCACCATCGACCACCGTCAGCGCGCCCTGGGC‑GCGGGCATGGGCCAGCAGCGCTGGCAG‑CGGTTGCCAGGTACCCAGCACGTTGGACAGCTGGCTGATGGCGAGCACTCGGGGGCGCGGGCCGATCAGTTGCAGt < 4:72894/135‑1 (MQ=255) gCACCATCGACCACCGTCAGCGCGCCCGGGGC‑GCGGGCATGGGCCAGCAGCGCTGGCCG‑CGGTTGCCAGGTACCCAGCCCGGTGGACAGCTGGCTGATGGCGCGCCCTCGGGTGCGCGGGCCGCTCAGTTGCAGTg > 8:41551/1‑136 (MQ=255) aCCATCGACCACCGTCAGCGCGCCCTGGGC‑GCGGGCATGGGCCAGCAGCGCTGGCAG‑CGGTTGCCAGGTTCCCAGCACGTTGGACAGCTGGCTGATGGCGCGCACTCGGGTGCGCGGGCCGCTCAGTTGCAGTGc > 2:329457/1‑135 (MQ=255) cGACCACCGTCAGCGCGCCCGGGGC‑GCGGGCATGGGCCAGCAGCGCTGGCCG‑CGGTTTGCAGGTACACAGCACCTTGGACACCTGGCTGATGGCGAGCACTCGGGGGCGCGGGCCGATCAGTTGCAGTGcctggt > 4:23377/1‑135 (MQ=255) gACCACCGTCAGCGCGCCCGGGGC‑GCGGGCATGGGCCAGCAGCGCTGGCCG‑CGGTTGCCAGGTACCCAGCACGTTGGTCAGCTGGCTGCTGGCGCGCCATCGGGTGCGCGGGCCGCTCAGTTTCAGTGcctggtc > 4:298713/1‑135 (MQ=255) ccGTCAGCGCGCCCTGGGC‑GCGGGCATGGGCCAGCAGCGCTGGCAG‑CGGTTGCCAGGTACCCAGCACGTTGGACAGCTGGCTGATGGCGAGCACTCGGGTGCGCGGGCCGATCAGTTGCAGTGCctggtcctggtc < 7:294484/136‑1 (MQ=255) cggcAGCGCGCCCTGGGC‑GCGGGCATGGGCCAGCAGCGCTGGCAG‑CGGGTGCCAGGTACCCAGCACGTTGGACAGCTGGCTGATGGCGAGCACTCGGGTGCGCGGGCCGATCAGTTGCAGTGCctggtcctggtc < 1:325019/132‑1 (MQ=255) cGTCAGCGCGCCCTGGGC‑GCGGGCATGGGCCAGCAGCGCTGGCAG‑CGGTTGCCAGGTACCCAGCACGTTGGACAGCTGGCTGATGGCGAGCACTCGGGTGCGCGGGCCGATCAGTTGCAGTGCctggtcctggtc < 3:189850/135‑1 (MQ=255) cGTCAGCGCGCCCTGGGC‑GCGGGCATGGGCCAGCAGCGCTGGCAG‑CGGTTGCCAGGTACCCAGCACGTTGGACAGCTGGCTGATGGCGAGCACTCGGGTGCGCGGGCCGATCAGTTGCAGTGCctggtcctggtc < 1:345262/135‑1 (MQ=255) cAGCGCGCCCTGGGC‑GCGGGCATGGGCCAGCAGCGCTGGCAG‑CGGTTGCCAGGTACCCAGCACGTTGGACAGCTGGCTGATGGCGAGCACTCGGGTGCGCGGGCCGATCAGTTGCAGTGCCTGGTCCTGGTCGATa > 7:336684/1‑136 (MQ=255) cggtGGGC‑GCGGGCATGGGCCAGCAGCGCTGGCAG‑CGGTTGCCAGGTACCCAGCACGTTGGACAGCTGGCTGATGGCGAGCACTCGGGGGCGCGGGCCGATCAGTTGCAGTGCCTGGTCCTGGTCGATACGACCAt < 8:400541/133‑1 (MQ=255) cccGGGGC‑GCGGGCAGGGGCCAGCAGCGCTGGCAG‑CGGTTGCCAGGTACCCAGCACGTTGGACAGCTGGCTGATGGCGAGCACTCGGGTGCGCGGGCCGATCAGTTGCAGTGCCTGGTCCTGGTCGATACGACCa < 4:28167/135‑1 (MQ=255) | CACGCCGACGCCGTCCGGACCGTACAGCTTGTGGCTGGAAAACACATAGAAGTCGCAGCCCAGTTGCTGCATGTCCTGGCGACCATGCACCACGCCCTGGGCACCATCGACCACCGTCAGCGCGCCCTGGGC‑GCGGGCATGGGCCAGCAGCGCTGGCAG‑CGGTTGCCAGGTACCCAGCACGTTGGACAGCTGGCTGATGGCGAGCACTCGGGTGCGCGGGCCGATCAGTTGCAGTGCCTGGTCCTGGTCGATACGACCAT > KT2440/1728884‑1729143 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |