New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	KT2440	2748358 =	82 (1.110)	4 (0.060)	4/234	7.0	5.1%	coding (1627/3147 nt)	czcA_2	Cobalt‑zinc‑cadmium resistance protein CzcA
	?	KT2440	= 2748354	73 (1.090)					coding (1623/3147 nt)	czcA_2	Cobalt‑zinc‑cadmium resistance protein CzcA
Rejected: Coverage evenness skew score above cutoff.
Rejected: Frequency below/above cutoff threshold.

GTTGCATGTCCACCGACTGCGACAGGCTGGTGCCCGGCACGCGCAGGGCCTGCAGGGCGAAGTCACCCTCGCTGAGGCTGGGGATGAACTCGCTGCCCATGCGGCTGGCCATCACGCCCGACAACAGCACCAGGGCGGCGGCGGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  KT2440/2748502‑2748358 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggcggcggcggcACATGCCAGTTTGCGCCGGCCCAGCACCCAGGCCAGAACCGGGGCATAGCGCTGCCGTGCCGTACGCATCACCAGGCCTTCCTCTTCCTTGACCTTGCCGGTGACGAACAGGGCAATGGCTGCCGGAACGAA  <  KT2440/2748354‑2748223                                                                                                                                                                                                                                                                                       GTTGCATGTCCACCGACTGCGACAGGCTGGTGCCCGGCACGCGCAGGGCCTGCAGGGCGAAGTCACCCTCGCTGAGGCTGGGGATGAACTCGCTGCCCATGCGGCTGGCCATCACGCCCGACAACAGCACCAGGGCG                                                                                                                                              <  5:298643/137‑1    GCATGTCCACCGACTGCGACAGGCTGGTGCCCGGCACGCGCAGGGCCTGCAGGGCGAAGTCACCCTCGCTGAGGCTGGGGATGAACTCGCTGCCCATGCGGCTGGCCATCACGCCCGACAACAGCACCAGGGCGGCG                                                                                                                                           >  1:308931/1‑137    GCATGTCCACCGACTGCGACAGGCTGGTGCCCGGCACGCGCAGGGCCTGCAGGGCGAAGTCACCCTCGCTGAGGCTGGGGATGAACTCGCTGCCCATGCGGCTGGCCATCACGCCCGACAACAGCACCAGGGCGGCG                                                                                                                                           >  2:247759/1‑137    GCATGTCCACCGACTGCGACAGGCTGGTGCCCGGCACGCGCAGGGCCTGCAGGGCGAAGTCACCCTCGCTGAGGCTGGGGATGAACTCGCTGCCCATGAGGCTGGCCATCACGCCCGACAACAGCACCAGGGCGGCG                                                                                                                                           >  2:365425/1‑137     CATGTCCACCGACTGCGACAGGCTGGTGCCCGGCACGCGCAGGGCCTGCAGGGCGAAGTCACCCTCGCTGAGGCTGGGGATGAACTCGCTGCCCATGCGGCTGGCCATCACGCCCGACAACAGCACCAGGGCGGCGG                                                                                                                                          <  6:429108/137‑1     CATGTCCACCGACTGCGACAGGCTGGTGCCCGGCACGCGCAGGGCCTGCAGGGCGAAGTCACCCTCGCTGAGGCTGGGGATGAACTCGCTGCCCATGCGGCTGGCCATCACGCCCGACAACAGCACCAGGGCGGCGG                                                                                                                                          <  5:215944/137‑1        GTCCACCGACTGCGACAGGCTGGTGCCCGGCACGCGCAGGGCCTGCAGGGCGAAGTCACCCTCGCTGAGGCTGGGGATGAACTCGCTGCCCATGCGGCTGGCCATCACGCCCGACAACAGCACCAGGGCGGCGGCGG                                                                                                                                       <  6:175088/137‑1        GTCCACCGACTGCGACAGGCTGGTGCCCGGCACGCGCAGGGCCTGCAGGGCGAAGTCACCCTCGCTGAGGCTGGGGATGAACTCGCTGCCCAGGCGGCTGGCCATCACGCCCGACAACAGCACCAGGGCGGCGGCGG                                                                                                                                       >  2:22775/1‑137                       CAGGCTGGTGCCCGGCACGCGCAGGGCCTGCAGGGCGAAGTCACCCTCGCTGAGGCTGGGGATGAACTCGCTGCCCATGCGGCTGGCCATCACGCCCGACAACAGCACCAGGGCGGCGGCGGCACATGCCAGTTTGC                                                                                                                        >  5:314831/1‑137                                                                                        ACTCGCTGCCCATGCGGCTGGCCATCACGCCCGACAACAGCACCAGGGCGGCGGCGGCACATGCCAGTTTGCGCCGGCCCAGCACCCAGGCCAGAACCGGGGCATAGCGCTGCCGTGCCGTACGCATCACCAGGCCT                                                       <  6:375355/137‑1                                                                                                       GGCTGGCCATCACGCCCGACAACAGCACCAGGGCGGCGGCGGCACATGCCAGTTTGCGCCGGCCCAGCACCCAGGCCAGAACCGGGGCATAGCGCTGCCGTGCCGTACGCATCACCAGGCCTTCCTCTTCCTTGACC                                        >  1:103741/1‑137                                                                                                             CCATCACGCCCGACAACAGCACCAGGGCGGCGGCGGCACATGCCAGTTTGCGCCGGCCCAGCACCCAGGCCAGAACCGGGGCATAGCGCTGCCGTGCCGTACGCATCACCAGGCCTTCCTCTTCCTTGACCTTGCCG                                  <  2:103741/137‑1                                                                                                                                      GGCGGCGGCGGCACATGCCAGTTTGCGCCGGCCCAGCACCCAGGCCAGAACCGGGGCATAGCGCTGCCGTGCCGTACGCATCACCAGGCCTTCCTCTTCCTTGACCTTGCCGGTGACGAACAGGGCAATGGCTGCCG         <  6:213904/137‑1                                                                                                                                        CGGCGGCGGCACATGCCAGTTTGCGCCGGCCCAGCACCCAGGCCAGAACCGGGGCATAGCGCTGCCGTGCCGTACGCATCACCAGGCCTTCCTCTTCCTTGACCTTGCCGGTGACGAACAGGGCAATGGCTGCCGGA       >  5:124217/1‑137                                                                                                                                          GCGGCGGCACATGCCAGTTTGCGCCGGCCCAGCACCCAGGCCAGAACCGGGGCATAGCGCTGCCGTGCCGTACGCATCACCAGGCCTTCCTCTTCCTTGACCTTGCCGGTGACGAACAGGGCAATGGCTGCCGGAAC     >  8:447140/1‑137                                                                                                                                          GCGGCGGCACATGCCAGTTTGCGCCGGCCCAGCACCCAGGCCAGAACCGGGGCATAGCGCTGCCGTGCCGTACGCATCACCAGGCCTTCCTCTTCCTTGACCTTGCCGGTGACGAACAGGGCAATGGCTGCCGGAAC     <  3:50009/137‑1                                                                                                                                          GCGGCGGCACATGCCAGTTTGCGCCGGCCCAGCACCCAGGCCAGAACCGGGGCATAGCGCTGCCGTGCCGTACGCATCACCAGGCCTTCCTCTTCCTTGACCTTGCCGGTGACGAACAGGGCAATGGCTGCCGGAAC     >  2:48905/1‑137                                                                                                                                          GCGGCGGCACATGCCAGTTTGCGCCGGCCCAGCACCCAGGCCAGAACCGGGGCATAGCGCTGCCGTGCCGTACGCATCACCAGGCCTTCCTCTTCCTTGACCTTGCCGGTGACGAACAGGGCAATGGCTGCCGGAAC     >  1:143294/1‑137                                                                                                                                            GGCGGCACATGCCAGTTTGCGCCGGCCCAGCACCCTGGCCAGACCCGGGGCATAGCGCTGCCGTGCCGTACGCATCACCAGGCCTTCCTCTTCGTTGACCGTGCCGGGGACGAGCAGGGCAATGGCTGCCGGAACGc   >  7:201328/1‑136                                                                                                                                             GCGGCACATGCCAGTTTGCGCCGGCCCAGCACCCAGGCCAGAACCGGGGCATAGCGCTGCCGTGCCGTACGCATCACCAGGCCTTCCTCTTCCTTGACCTTGCCGGTGACGAACAGGGCAATGGCTGCCGGAACGAA  <  6:190758/137‑1                                                                                                                                                                                                                                                                                       GTTGCATGTCCACCGACTGCGACAGGCTGGTGCCCGGCACGCGCAGGGCCTGCAGGGCGAAGTCACCCTCGCTGAGGCTGGGGATGAACTCGCTGCCCATGCGGCTGGCCATCACGCCCGACAACAGCACCAGGGCGGCGGCGGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  KT2440/2748502‑2748358 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggcggcggcggcACATGCCAGTTTGCGCCGGCCCAGCACCCAGGCCAGAACCGGGGCATAGCGCTGCCGTGCCGTACGCATCACCAGGCCTTCCTCTTCCTTGACCTTGCCGGTGACGAACAGGGCAATGGCTGCCGGAACGAA  <  KT2440/2748354‑2748223

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.