Read alignment evidence... | |||||||||||
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seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
* | KT2440 | 828,859 | 0 | A | C | 33.8% | 88.5 / 12.7 | 70 | P90P (CCT→CCG) | CJ019_00791 | putative sulfate transporter |
Reads supporting (aligned to +/- strand): ref base A (26/19); new base C (0/23); total (26/44) | |||||||||||
Fisher's exact test for biased strand distribution p-value = 6.52e-07 | |||||||||||
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Rejected as consensus: Frequency below/above cutoff threshold. |
GCAACTCGGTGATAAAGCCCAGGCGCAGCAGCCCGGCAATCACACAGAACGCCCCGGCGACCAGCGCCATCATGCTGGCGATGGCGATCGCCCGCTGCGGGTCGCTGGCGGCGTATTGCACCACCACAGCCAGGATAGGCGCGGCCAGCGCCGAGTCCGGGCCCAGCACCAGGATACGGCTGGGACCGAACAGGGCATAGGCCAGCAGGGGGATGATGGTAGCGTACAGGCCATAGATACCGGGGACGCCGGAAGCCTCGGCGTAG > KT2440/828723‑828988 | gCAACTCGGTGATAAAGCCCAGGCGCAGCAGCCCGGCAATCACACAGAACGCCCCGGCGACCAGCGCCATCATGCTGGCGATGGCGATCGCCCGCTGCGGGTCGCTGGCGGCGTATTGCACCACCACAGCCAGGATa < 3:437322/137‑1 (MQ=255) aCTCGGTGATAAAGCCCAGGCGCAGCAGCCCGGCAATCACACAGAACGCCCCGGCGACCAGCGCCATCATGCTGGCGATGGCGATCGCCCGCTGCGGGTCGCTGGCGGCGTATTGCACCACCACAGCCAGGATAGgc > 5:298770/1‑137 (MQ=255) cTCGGTGATAAAGCCCAGGCGCAGCAGCCCGGCAATCACACAGAACGCCCCGGCGACCAGCGCCATCATGCTGGCGATGGCGATCGCCCGCTGCGGGTCGCTGGCGGCGTATTTCACCACCACAGCCAGGATAGgcg > 7:16824/1‑137 (MQ=255) cTCGGTGATAAAGCCCAGGCGCAGCAGCCCGGCAATCACACAGAACGCCCCGGCGACCAGCGCCATCATGCTGGCGATGGCGATCGCCCGCTGCGGGTCGCTGGCGGCGTATTGCACCACCACAGCCAGGATAggag > 6:12490/1‑135 (MQ=255) cTCGGTGATAAAGCCCAGGCGCAGCAGCCCGGCAATCACACAGAACGCCCCGGCGACCAGCGCCATCATGCTGGCGATGGCGATCGCCCGCTGCGGGTCGCTGGCGGCGTATTGCACCACCACAGCCAGGATAGgcg > 8:407469/1‑137 (MQ=255) cTCGGTGATAAAGCCCAGGCGCAGCAGCCCGGCAATCACACAGAACGCCCCGGCGACCAGCGCCATCATGCTGGCGATGGCGATCGCCCGCTGCGGGTCGCTGGCGGCGTATTGCACCACCACAGCCAGGATAGgcg > 8:204835/1‑137 (MQ=255) cTCGGTGATAAAGCCCAGGCGCAGCAGCCCGGCAATCACACAGAACGCCCCGGCGACCAGCGCCATCATGCTGGCGATGGCGATCGCCCGCTGCGGGTCGCTGGCGGCGTATTGCACCACCACAGCCAGGATAGgcg > 1:284981/1‑137 (MQ=255) cTCGGTGATAAAGCCCAGGCGCAGCAGCCCGGCAATCACACAGAACGCCCCGGCGACCAGCGCCATCATGCTGGCGATGGCGATCGCCCGCTGCGGGTCGCTGGCGGCGTATTGCACCACCACAGCCAGGATAGgcg > 8:202161/1‑137 (MQ=255) cTCGGTGATAAAGCCCAGGCGCAGCAGCCCGGCAATCACACAGAACGCCCCGGCGACCAGCGCCATCATGCTGGCGATGGCGATCGCCCGCTGCGGGTCGCTGGCGGCGTATTGCACCACCACAGCCAGGATAGgcg > 7:348613/1‑137 (MQ=255) gTGATAAAGCCCAGGCGCAGCAGCCCGGCAATCACCCAGACCGCCCCGGCGACCAGCGCCATCATGCGGGCGATGGCGATCGCCCGCTGCGGGTCGCTGGCGGCGTATTGCACCACCACAGCCAGGATAGGCGCGGc < 5:248937/137‑1 (MQ=255) tGATAAAGCCCAGGCGCAGCAGCCCGGCAATCACACAGAACGCCCCGGCGACCAGCGCCATCATGCTGGCGATGGCGATCGCCCGCTGCGGGTCGCTGGCGGCGTATTGCACCACCACAGCCAGGATAGGCGCGGcc > 6:224317/1‑137 (MQ=255) gATAAAGCCCAGGCGCAGCAGCCCGGCAATCACACAGAACGCCCCGGCGACCAGCGCCATCATGCTGGCGATGGCGATCGCCCGCTGCGGGTCGCTGGCGGCGTATTGCACCACCACAGCCAGGATAGGCGCGGCCa > 1:240025/1‑137 (MQ=255) aaaaCCCCAGGCGCAGCCCCCCGCCAACCACCCAGACCGCCCCGGCGACCAGCGCCATCAGGCGGGCTATGGCGAGCGCCCGCGGCGGGCCGCGGGCGGCGTATTGCACCACCCCCCCAAGGATCGGCGCGGCCAgc < 4:39563/136‑1 (MQ=255) ggCGCAGCAGCCCGGCAATCACACAGAACGCCCCGGCGACCAGCGCCATCATGCTGGCGATGGCGATCGCCCGCTGCGGGGCGCTGGCGGCGTATTGCACCACCACAGCCAGGATAGGCGCGGCCAGCGCCGAGTcc < 7:276273/137‑1 (MQ=255) gcgcAGCAGCCCGGCAATCACACAGAACGCCCCGGCGACCAGCGCCATCATGCTGGCGATGGCGATCGCCCGCTGCGGGTCGCTGGCGGCGTATTGCACCACCACAGCCAGGATAGGCGCGGCCAGCGCCGAGTCCg > 4:64965/1‑137 (MQ=255) gcgcAGCAGCCCGGCAATCACACAGAACGCCCCGGCGACCAGCGCCATCATGCTGGCGATGGCGATCGCCCGCTGCGGGTCGCTGGCGGCGTATTGCACCACCACACCCAGGATAGGCGCGGCCAGCGCCGAGTccc > 1:223395/1‑136 (MQ=255) cgcAGCCGCCCGGAAACCACACACACCCCCCGGGCGACCAGCGCCATCATGCGGGCGAGGGCGAGCGCCCGCTGCGGGTCGCGGGCGGCTTATTCCCCCACCACCGCCAGGATCGGCGCGGCCCGCGCCGAGTCCgg < 6:247533/137‑1 (MQ=255) gcagcaGCCCGGCAATCACACAGAACGCCCCGGCGACCAGCGCCATCATGCTGGCGATGGCGATCGCCCGCTGCGGGTCGCTGGCGGCGTATTGCACCACCACAGCCAGGATAGGCGCGGCCAGCGCCGAGTCCggg > 4:142775/1‑137 (MQ=255) gcagcaGCCCGGCAATCACACAGAACGCCCCGGCGACCAGCGCCATCATGCTGGCGATGGCGATCGCCCGCTGCGGGTCGCTGGCGGCGTATTGCACCACCACAGCCAGGATAGGCGCGGCCAGCGCCGAGTCCggg > 7:81029/1‑137 (MQ=255) cgcCCGCCAATCACACAGAACGCCCCGGCGACCAGCGCCATCAGGCTGGCTATGGCGATCGCCCGCTGCGGGTCGCTGGCGGCTTATTGCACCCCCACAGCCAGCATCGGCGCGGCCCGCGCCGAGTCCGGGCCCAg < 4:184734/136‑1 (MQ=255) agcCCGGCAATCACACAGACCGCCCCGGCGACCAGCGCCATCATGCTGGCGATGGCGATCGCCCGCTGCGGGTCGCTGGCGGCGTATTGCACCACCACAGCCAGGATAGGCGCGGCCAGCGCCGAGTCCGGGCCCAg < 7:48905/137‑1 (MQ=255) agcCCGGCAATCACACAGAACGCCCCGGCGACCAGCGCCATCATGCTGGCGATGGCGATCGCCCGCTGCGGGTCGCTGGCGGCTTATTGCACCACCACAGCCAGGATAGGCGCGGCCAGCGCCGAGTCCGGGCCCAg < 7:129750/137‑1 (MQ=255) agcCCGGAAATCACACAGACCGCCCCGGCGACCAGCGCCATCATGCTGGCGATGGCGATCGCCCGCTGCGGGGCGCTGGCGGCGTATTGCCCCACCACAGCCAGCATCGGCGCGGCCAGCGCCGAGTCCGGGCCCAg < 2:313589/137‑1 (MQ=255) gcCCGGCAATCACACAGAACGCCCCGGCGACCAGCGCCATCATGCTGGCGATGGCGATCGCCCGCTGCGGGTCGCTGGCGGCGTATTGCACCACCACAGCCAGGATAGGCGCGGCCAGCGCCGAGTCCGGGCCCAGc > 4:68028/1‑137 (MQ=255) gCAATCACACAGACCCCCCCGGCGACCAGCGCCATCATGCTGGCGATGGCTATCGCCCGCTGCGGGTCGCTGGCGGCGTATTCCACCACCACCGCCAGGATAGGCGCGGCCAGCGCCGAGTCCGGGCCCAGCACCAg < 6:205203/137‑1 (MQ=255) caaaacacacacaACGCCCCGGCGCCCAGCGCCATCATGCTGGCGATGGCGATCGCCCGCTGCGGGTCGCTGGCGGCTTATTGCACCCCCACCGCCCGGATCGGGGCGGCCAGCGCCGAGTCCGGGCCCAGCACCAg < 4:254294/132‑1 (MQ=255) cAATCACACAGAACGCCCCGGCGACCAGCGCCATCATGCTGGCGATGGCGATCGCCCGCTGCGGGTCGCTGGCGGCGTATTGCACCACCACAGCCAGGATAGGCGCGGCCAGCGCCGAGTCCGGGCCCAGCACCAgg > 8:218718/1‑137 (MQ=255) aaaTCACACACAACGCCCGGCCTACCAGCGCAATCATGCTGGCTTGGGCTTTCGCCCGGTGGGGGGCGCTGGGGGGTTATTCCACACCCACAGCCCGTATCGGCGCGGCCAGCGCCGAGTCCGGGCCCAGCACCAgg < 6:12796/136‑1 (MQ=255) cacacaGACCCCCCCGGCGACCACCGCCATCATGCTGGCGATGGCTATCGCCCGCTGCGGGGCGCTGGCGGCGTATTGCACCACCACACCCAGCATCGGCGCGGCCAGCGCCGAGTCCGGGCCCAGCACCAGGATAc < 3:362475/137‑1 (MQ=255) caGAACGCCCCGGCGACCAGCGCCATCATGCTGGCGATGGCGATCGCCCGCTGCGTGTCGCTGGCGGCGTATTGCACCACCACAGCCAGGATAGGCGCGGCCAGCGCCGAGTCCGGGCCCAGCACCAGGATACGGCt > 4:6507/1‑137 (MQ=255) agccccccccGGCCCCCCGCCCAATCTTGCTGGCGTGGGCTAGCGCCGGGGGGGGGGCGCTGGGGGGTTATTCCACCCCCACACCCAGGATCGGCGGGCCCCGCGCCGAGTCCGGGCCCAGCACCAGGATACGGCTg < 6:298770/131‑1 (MQ=255) acaccGCCCCGGCGACCAGCGCAATCATGCTGGCGTTGGCGAGCGCCCGCTGCGGGTCGCTGGCGGGGTATTGCACCACAACTGCAAGTATTGGCGGTGCAAGCGCCGAGTCCGGGCCCAGCACCAGGATACGGCTg < 4:183793/133‑1 (MQ=255) aGAACGCCCCGGCGACCAGCGCCATCATGCTGGCGATGGCGATCGCCCGCTGGGGGGCGCTGGCGGCGTATTGCACCACCACACCCAGTATAGGCGCGGCCTGCGCCGAGTCCGGGCCCAGCACCAGGATACGGCTg < 1:17482/137‑1 (MQ=255) accGCCCCGCCGACCCGCGCCTTCTTGCGGGCTATGGCGATGGCCGGCGGGGGGGGGCGGGCGGGTTATGGACCCCCCACACCACGTATCGCCGCGCCAAGCCCCGAGTCCGGGCCCAGCACCAGGATACGGCTggg < 8:16824/135‑1 (MQ=255) gCCCCGGCGACCAGCGCCATCATGCTGGCGATGGCGATCGCCCGCTGCGGGTCGCTGGCGGCGTATTGCACCACCACCGCCAGGATCGGCGCGGCCAGCGCCGAGTCCGGGCCCAGCACCAGGATACGGCTGGGAcc < 5:201194/137‑1 (MQ=255) ccccgGGCGCCCCGCGCAATCATGGGGGGGAGGGCGAGCGCCCGCGGGGGGGCGCGGGCGGCTTATTCCACCCCCCCCCCCCGGATCGGCGCGGCCCGCGCCGAGTCCGGGCCCAGCACCAGGATACGGCTGGGAcc < 2:240025/136‑1 (MQ=255) cccccGGCGACCAGCGCCATAATGCTGGCGATGGCGATCGCCCGCTGCGGGGCGCGGGCGGCTTATTGCACCACCACCGCCCGCATCGGCGCGGCCCGCGCCGAGTCCGGGCCCAGCACCAGGATACGGCTGGGAcc < 7:299146/136‑1 (MQ=255) cccccGGCGACCAGCGCAATCCTGCGGGCGATGGCGAGCGCCCGCTGCGGGGCGCTGGCGGCTTATTCCACCACCACACCCAGCATCGGCGCGGCCAGCGCCGAGTCCGGGCCCAGCACCAGGATACGGCTGGGAcc < 4:150967/136‑1 (MQ=255) cccGGCGACCAGCGCCTTCATGCTGGGGATGGCGATCGCCGGCGGCGGGTGGCTGGCGGCTTATTGCACCACCACCGCCAGGATCGGCGCGCCCAGCGCCGAGTCCGGGCCCAGCACCAGGATACGGCTGGGACCGa < 8:81029/137‑1 (MQ=255) cccGGCGACCAGCGCCATCATGCTGGCGATGGCGATCGCCCGCTGCGGGTCGCTGGCGGCGTATTGCACCACCACAGCCAGGATAGGCGCGGCCAGCGCCGAGTCCGGGCCCAGCACCAGGATACGGCTGGGACCGa > 5:371269/1‑137 (MQ=255) cccGGCGACCAGCGCCATCATGCTGGCGATGGCGATCGCCCGCTGCGGGTCGCTGGCGGCGTATTGCACCACCACAGCCAGGATAGGCGCGGCCAGCGCCGAGTCCGGGCCCAGCACCAGGATACGGCTGGGACCGa > 2:459067/1‑137 (MQ=255) cGACCCGCGCCATCATGCGGGCGAGGGCGAGCGCCGGCTGCGGGGGGGGGGCGGCGTATTCCACCCCCACCGCCGGGATCGGCGCGCCCAGCGCCGAGTCCGGGCCCAGCACCAGGATACGGCTGGGACCGAACAgg < 3:286153/137‑1 (MQ=255) cccATCATGGTGGCGTTGGCGATCGCCGGCTGGGGGTCGCTGGGGGCTTATTCCACCACCACACCCAGGATCGGCGCGGCCAGCGCCGAGTCCGGGCCCAGCACCAGGATACGGCTGGGACCGAACAGGGCATAGGc < 3:68028/136‑1 (MQ=255) catcatGCTGGCGATGGCGATCGCCCGCTGCGGGTCGCTGGCGGCGTATTGCACCACCACAGCCAGGATAGGCGCGGCCAGCGCCGAGTCCGGGCCCAGCACCAGGATACGGCTGGGACCGAACAGGGCATAGGCca > 4:398055/1‑137 (MQ=255) gcgggcgttggcgagGGCCCGCGGCGGGCGGGTGGCGGCGTATTCCCCCACCACCCCCAGGATCGGCGGGGCCAGCGCCGAGTCCGGGCCCAGCACCAGGATACGGCTGGGACCGAACAGGGCATAGGCCAGCAggg < 6:18329/134‑1 (MQ=255) ggcgagggcgagCGCCCGGGGCGGGTGGGGGGCGGGTTATTCCACCCCCCCCGCAAGGATCGGCGCGGCCCGGCCCGAGTCCGGGCCCAGCACCAGGATACGGCTGGGACCGAAGAGGGCATAGGCCAGCAGGGGga < 4:446681/137‑1 (MQ=255) gcgatggcgatCGCCCGCTGCGGGTCGCTGGCGGCGTATTGCACCACCACAGCCAGGATAGGCGCGGCCAGCGCCGAGTCCGGGCCCAGCACCAGGATACGGCTGGGACCGAACAGGGCATAGGCCAGCAGGGGgat > 1:247932/1‑137 (MQ=255) tggcgagCTCCCGCTGGGGGTCGCTGGCGGCTTATTGAACCACCACCGCCAGGATCGGCGCGGCCAGCGCCGAGTCCGGGCCCAGCACCAGGATACGGCTGGGACCGAACAGGGCATAGGCCAGCATGGGGatgatg < 6:143948/137‑1 (MQ=255) gggctatCGCCCGCTGCGGGGCTCGGGCGGCGTATTGCACCACCACACCCAGGATAGGCGCGGCCAGCGCCGAGTCCGGGCCCAGCACCAGGATACGGCTGGGACCGAACAGGGCATAGGCCAGCAGGGGGatgatg < 6:68915/136‑1 (MQ=255) gggcgttGGCCGGCGGCGGGTGGCGGGCGGGTTTTTCCACCACCACCCCCCGTATAGGCGCGCCCAGCGCCGAGTCCGGGCCCAGCACCAGGATACGGCTGGGACCGAACAGGGCATAGGCCAGCAGGGGGatgatg < 3:376820/136‑1 (MQ=255) ggcgatCGCCCGCTGCGGGTCGCTGGCGGCGTATTGCACCACCACAGCCAGGATAGGCGCGGCCAGCGCCGAGTCCGGGCCCAGCACCAGGATACGGCTGGGACCGAACAGGGCATAGGCCAGCAGGGGGATGATgg > 4:275950/1‑137 (MQ=255) ttCGCCCGCTGGGGGTCGCTGGCGGGTTATTGCACCACCACAGCAAGGATAGGCGCGGCCAGCGCCGAGTCCGGGCCCAGCACCAGGATACGGCTGGGACCGAACAGGGCATAGGCCAGCAGGGGGATGATGGTAGc < 7:407469/136‑1 (MQ=255) ttCGCCCGCTGCGGGGCGCTGGCGGCGTATTGCACCCCCCCAGCACGGATAGGCGCGGCCAGCGCCGAGTCCGGGCCCAGCACCAGGATACGGCTGGGACCGAACAGGGCATAGGCCAGCAGGGGGATGATGGTAGc < 7:322489/136‑1 (MQ=255) tgcGCCCGCGGCGGGGCGCTGGCGGCGTATTGCACCCCCACAGCCAGGATAGGCGCGGCCAGCGCCGAGTCCGGGCCCAGCACCAGGATACGGCTGGGACCGAACAGGGCATAGGCCAGCAGGGGGATGATGGTAGc < 7:202161/135‑1 (MQ=255) atggCCCGCTGGGGGGGGGTGGCGGCTTATTGCACCACCACTGCCAGGATCGGCGCGGCCAGCGCCGAGTCCGGGCCCAGCACCAGGATACGGCTGGGACCGAACAGGGCATAGGCCAGCAGGGGGATGATGGTAGc < 7:144990/134‑1 (MQ=255) atCGCCCGCTGGGGGTCGCTGGCGGCTTATTGCACCACCACAGCCAGGATAGGCGCGGCCAGCGCCGAGTCCGGGCCCAGCACCAGGATACGGCTGGGACCGAACAGGGCATAGGCCAGCAGGGGGATGATGGTAGc < 3:263310/137‑1 (MQ=255) atCGCCCGCTGCGGGTCGCTGGCGGCGTATTGCACCACCACAGCCAGGATAGGCGCGGCCAGCGCCGAGTCCGGGCCCAGCACCAGGATACGGCTGGGACCGAACAGGGCATAGGCCAGCAGGGGGATGATGGTAGc < 7:379194/137‑1 (MQ=255) agcGCACGCTGCGGGTCGCTGGCGGGGTATTCACCCCCCACAGCCAGGATAGGCGCGGCCCGCGCCGAGTCCGGGCCCAGCACCAGGATACGGCTGGGACCGAACAGGGCATAGGCCAGCAGGGGGATGATGGTAGc < 2:341081/135‑1 (MQ=255) cggCTGCGGGTCGCTGGGGGCGTATTGCACCCCCAAACCATGCATAGGCGCGGCCAGCCCCGAGTCCGGGCCCAGCACCAGGATACGGCTGGGACCGAACAGGGCATAGGCCAGCAGGGGGATGATGGTAGCGTACa < 5:329106/135‑1 (MQ=255) gtGCGGGTCGCTGGCGGCGTATTGCACCACCACCGCCAGGATAGGCGCGGCCAGCGCCGAGTCCGGGCCCAGCACCAGGATACGGCTGGGACCGAACAGGGCATAGGCCAGCAGGGGGATGATGGTAGCGTACAGGc < 5:187417/136‑1 (MQ=255) gtGGCGGCGTATTGCACCCCCCCAGCCAGGATAGGCGCGGCCAGCGCCGAGTCCGGGCCCAGCACCAGGATACGGCTGGGACCGAACAGGGCATAGGCCAGCAGGGGGATGATGGTAGCGTACAGGCCATAGATAcc < 8:254252/136‑1 (MQ=255) gtcttGCACCACCCAACACAGGATAGGCGCGGCCAGCGCCGAGTCCGGGCCCAGCACCAGGCTACGGCTGGGACCGAACAGGGCATAGGCCAGCCGGGGGATGATGGTAGCGTACAGGCCATAGATACCGGGGACGc < 8:456430/134‑1 (MQ=255) caccaccacCGCCCGGTAGGGCGCGGCCAGCGCCGAGTCCGGGCCCAGCACCAGGATACGGCTGGGACCGAACAGGGCATAGGCCAGCAGGGGGATGATGGTAGCGTACAGGCCATAGATACCGGGGACGCCGGAAg < 6:432566/137‑1 (MQ=255) caccaccacCGCCAGGATCGGCGCGGCCAGCGCCGAGGCCGGGCCCAGCACCAGGATACGGCTGGGACCGAACAGGGCATAGGCCAGCAGGGGGATGATGGTAGCGTACAGGCCATAGATACCGGGGACGCCGGAAg < 6:118944/137‑1 (MQ=255) caccaccacAGCCAGGATCGGCGCGGCCCGCGCCGAGTCCGGGCCCAGCACCAGGATACGGCTGGGACCGAACAGGGCATAGGCCAGCAGGGGGATGATGGTAGCGTACAGGCCATAGATACCGGGGACGCCGGAAg < 6:468929/137‑1 (MQ=255) cacaGCCAGGATAGGCGCGGCCAGCGCCGAGTCCGGGCCCAGCACCAGGATACGGCTGGGACCGAACAGGGCATAGGCCAGCAGGGGGATGATGGTAGCGTACAGGCCATAGATACCGGGGACGCCGGAAGCCTCgg > 6:424703/1‑137 (MQ=255) cacaGCCAGGATAGGCGCGGCCAGCGCCGAGTCCGGGCCCAGCACCAGGATACGGCTGGGACAGAACAGGGCATAGGCCAGCAGGGGGATGATGTTAGCGTACAGGCCATATATACCGCCGACGCCGGAAGCCTCgg > 5:432566/1‑137 (MQ=255) caGCCAGGATAGGCGCGGCCAGCGCCGAGTCCGGGCCCAGCACCAGGATACGGCTGGGACCGAACAGGGCATAGGCCCGCAGGGGGATGAGGGTAGCGTACAGGCCATAGATACCGGGGACGCCGGAAGCCTCGGCg > 6:371952/1‑137 (MQ=255) ccAGTATCGGCGCGGCCAGCGCCGAGTCCGGGCCCAGCACCAGGATACGGCTGGGACCGAACAGGGCATAGGCCAGCAGGGGGATGATGGTAGCGTACAGGCCACAGATACCGGGGACGCCGGAAGCCTCGGCGTAg < 7:223277/137‑1 (MQ=255) ggATAGGCGCGGCCAGCGCCGAGTCCGGGCCCAGCACCAGGATACGGCTGGGACCGAACAGGGCATAGGCCAGCAGGGGGATGATGGTAGc < 7:2179/91‑1 (MQ=255) ggATAGGCGCGGCCAGCGCCGAGTCCGGGCCCAGCACCAGGATACGGCTGGGACCGAACAGGGCATAGGCCAGCAGGGGGATGATGGTAGc > 8:2179/1‑91 (MQ=255) | GCAACTCGGTGATAAAGCCCAGGCGCAGCAGCCCGGCAATCACACAGAACGCCCCGGCGACCAGCGCCATCATGCTGGCGATGGCGATCGCCCGCTGCGGGTCGCTGGCGGCGTATTGCACCACCACAGCCAGGATAGGCGCGGCCAGCGCCGAGTCCGGGCCCAGCACCAGGATACGGCTGGGACCGAACAGGGCATAGGCCAGCAGGGGGATGATGGTAGCGTACAGGCCATAGATACCGGGGACGCCGGAAGCCTCGGCGTAG > KT2440/828723‑828988 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |