| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | KT2440 | 1891946 = | 24 (0.330) | 3 (0.040) | 3/254 | 8.0 | 6.8% | noncoding (37/77 nt) noncoding (37/77 nt) |
PP_RS08755 PP_RS08765 |
tRNA‑Asp tRNA‑Asp |
| ? | KT2440 | = 3134198 | 59 (0.830) | coding (58/972 nt) | CJ019_02952 | hypothetical protein | |||||
| Rejected: Coverage evenness skew score above cutoff. | |||||||||||
| Rejected: Frequency below/above cutoff threshold. | |||||||||||
GCGTAAACGATTGCATGATGCAGAAATAAAAAAAGCGACCCTAAGGTCGCTTTCTTTTTTACTTCCGGGTGTTCAGTGGGCCCTGGAAGTGGAATATGGCGCAGCGGACGGGACTCGAACCCGCGACCCCCGGCGT‑G‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < KT2440/1892082‑1891946‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gt‑gCCAGGCCGCCCGCCAATGTCAGCACCAGAACGGTGAGCAACGTCAGGATTCGACTCATGCCTGCGCCCTTTGCTCATCTGCCAAGGCGGCGCCGTTGAGGTAGTGGTCGCCGAGCAGTCGCCGTTGAGTGGGCAGT < KT2440/3134198‑3134063 gataAAACGTTTCCATCATCAAAAAAAAAAAAACGCGACCCTAAGGTCGCTTTCTTTTTTACTTCCGGGTGTTCAGTGGGCCCTGGAAGTGGAATATGGCGCAGCGGACGGGACTCGAACCCGCGACCCCCGGCGT‑G < 5:440476/133‑1 ATGATGCAGAAATAAAAAAAGCGACCCTAAGGTCGCTTTCTTTTTTACTTACGGGTGTTGAGTGGGCCCTGGATGTGGAATATGGCGCAGCGGACGGGCCTCGAACACGCGCCCCCCGGCGTGGCCGGGCCGtattt > 1:374344/1‑132 AGTGGGCCCTGGAAGTGGAATATGGCGCAGCGGACGGGACTCGAACCCGCGACCCCCGGCGT‑G < 3:408978/63‑1 AGTGGGCCCTGGAAGTGGAATATGGCGCAGCGGACGGGACTCGAACCCGCGACCCCCGGCGT‑G > 4:408978/1‑63 CGAACCCGCGACCCCCGGCGT‑GCCAGGCCGCCCGCCAATGTCAGCACCAGAACGGTGAGCAACGTCAGGATTCG < 7:34555/74‑1 CGAACCCGCGACCCCCGGCGT‑GCCAGGCCGCCCGCCAATGTCAGCACCAGAACGGTGAGCAACGTCAGGATTCG > 8:34555/1‑74 GT‑GCCAGGCCGCCCGCCAATGTCAGCACCAGAACGGTGAGCAACGTCAGGATTAGACTAATGCCTGCGCCCTTTGGTCATCTGCCAAGGCGGCGCCGTTGAGGTTGTGGTCGCCGAGCAGTCGCCGTTGAGTGGGCA > 7:95365/1‑137 T‑GCCAGGCCGCCCGCCAATGTCAGCACCAGAACGGTGAGCAACGTCAGGATTCGACTCATGCCTGCGCCCTTTGCTCATCTGCCAAGGCGGCGCCGTTGAGGTAGTGGTCGCCGAGCAGTCGCCGTTGAGTGGGCAG < 6:5901/137‑1 GCCAGGCCGCCCGCCAATGTCAGCACCAGAACGGTGAGCAACGTCAGGATTCGACTCATGCCTGCGCCCTTTGCTCATCTGCCAAGGCGGCGCCGGTGAGGTAGTGGTCGCCGCGCAGTCGCCGTTGAGTGGGCAGT > 2:278774/1‑137 GCGTAAACGATTGCATGATGCAGAAATAAAAAAAGCGACCCTAAGGTCGCTTTCTTTTTTACTTCCGGGTGTTCAGTGGGCCCTGGAAGTGGAATATGGCGCAGCGGACGGGACTCGAACCCGCGACCCCCGGCGT‑G‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < KT2440/1892082‑1891946‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gt‑gCCAGGCCGCCCGCCAATGTCAGCACCAGAACGGTGAGCAACGTCAGGATTCGACTCATGCCTGCGCCCTTTGCTCATCTGCCAAGGCGGCGCCGTTGAGGTAGTGGTCGCCGAGCAGTCGCCGTTGAGTGGGCAGT < KT2440/3134198‑3134063 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |