New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	KT2440	2264809 =	44 (0.600)	5 (0.070)	4/254	7.4	8.9%	noncoding (37/77 nt) noncoding (37/77 nt)	PP_RS08755 PP_RS08765	tRNA‑Asp tRNA‑Asp
	?	KT2440	= 3134198	59 (0.830)					coding (58/972 nt)	CJ019_02952	hypothetical protein
Rejected: Coverage evenness skew score above cutoff.
Rejected: Frequency below/above cutoff threshold.

TCCGGCGCGATGGCCTCAGGGCAGGCACAAAAAAAGCGATAACGCGATCGCTTCTCTTGTGTTTGCTTCAAGGTGTTCTAGGGACCTTGAAACGAAGATGGCGCAGCGGACGGGACTCGAACCCGCGACCCCCGGCGTG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  KT2440/2264947‑2264809 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gtgCCAGGCCGCCCGCCAATGTCAGCACCAGAACGGTGAGCAACGTCAGGATTCGACTCATGCCTGCGCCCTTTGCTCATCTGCCAAGGCGGCGCCGTTGAGGTAGTGGTCGCCGAGCAGTCGCCGTTGAGTGGGCAGT  <  KT2440/3134198‑3134063                                                                                                                                                                                                                                                                                     tcgcGCGCGATGGCCTGTGGGCAGGCACAAAATAACCGATCCCGCGATCGCTAGTCTTGTGTTTGCTTCAAGGTGTTCTTGGGCCCTTGAATCGAAGATGGCGCAGCGGACGGGACTCGAACCCGCGACCCCCGGCG                                                                                                                                            <  6:214814/133‑1    GGCGCGATGGCCTCAGGGCAGGCACAAAAAAAGCGATAACGCGATCGCTTCTCTTGTGTTTGCTTCAAGGTGTTCTAGGGACCTTGAAACGAAGATGGCGCAGCGGACGGGACTCGACCCCGCGACCCCCGGCGTGC                                                                                                                                         >  4:362613/1‑137    GGCGCGATGGCCTCAGGGCAGGCACAAAAAAAGCGATAACGCGATCGCTTCTCTTGTGTTTGCTTCAAGGTGTTCTAGGGACCTTGAAACGAAGATGGCGCAGCGGACGGGACTCGAACCCGCGACCCCCGGCGTGg                                                                                                                                         >  1:153290/1‑136     GCGCGATGGCCTCAGGGCAGGCACAAAAAAAGCGATAACGCGATCGCTTCTCTTGTGTTTGCTTCAAGGTGTTCTAGGGACCTTGAAACGAAGATGGCGCAGCGGACGGGACTCGAACCCGCGACCCCCGGCGTGCC                                                                                                                                        >  1:281135/1‑137     GCGCGATGGCCTCAGGGCAGGCACAAAAAAAGCGATAACGCGATCGCTTCTCTTGTGTTTGCTTCAAGGTGTTCTAGGGACCTTGAAACGAAGATGGCGCAGCGGACGGGACTCGAACCCGCGACCCCCGGCGTGCC                                                                                                                                        >  5:55454/1‑137                                                                                                                      CGAACCCGCGACCCCCGGCGTGCCAGGCCGCCCGCCAATGTCAGCACCAGAACGGTGAGCAACGTCAGGATTCG                                                                                      <  7:34555/74‑1                                                                                                                      CGAACCCGCGACCCCCGGCGTGCCAGGCCGCCCGCCAATGTCAGCACCAGAACGGTGAGCAACGTCAGGATTCG                                                                                      >  8:34555/1‑74                                                                                                                                         GTGCCAGGCCGCCCGCCAATGTCAGCACCAGAACGGTGAGCAACGTCAGGATTAGACTAATGCCTGCGCCCTTTGGTCATCTGCCAAGGCGGCGCCGTTGAGGTTGTGGTCGCCGAGCAGTCGCCGTTGAGTGGGCA    >  7:95365/1‑137                                                                                                                                          TGCCAGGCCGCCCGCCAATGTCAGCACCAGAACGGTGAGCAACGTCAGGATTCGACTCATGCCTGCGCCCTTTGCTCATCTGCCAAGGCGGCGCCGTTGAGGTAGTGGTCGCCGAGCAGTCGCCGTTGAGTGGGCAG   <  6:5901/137‑1                                                                                                                                           GCCAGGCCGCCCGCCAATGTCAGCACCAGAACGGTGAGCAACGTCAGGATTCGACTCATGCCTGCGCCCTTTGCTCATCTGCCAAGGCGGCGCCGGTGAGGTAGTGGTCGCCGCGCAGTCGCCGTTGAGTGGGCAGT  >  2:278774/1‑137                                                                                                                                                                                                                                                                                     TCCGGCGCGATGGCCTCAGGGCAGGCACAAAAAAAGCGATAACGCGATCGCTTCTCTTGTGTTTGCTTCAAGGTGTTCTAGGGACCTTGAAACGAAGATGGCGCAGCGGACGGGACTCGAACCCGCGACCCCCGGCGTG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  KT2440/2264947‑2264809 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gtgCCAGGCCGCCCGCCAATGTCAGCACCAGAACGGTGAGCAACGTCAGGATTCGACTCATGCCTGCGCCCTTTGCTCATCTGCCAAGGCGGCGCCGTTGAGGTAGTGGTCGCCGAGCAGTCGCCGTTGAGTGGGCAGT  <  KT2440/3134198‑3134063

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.