| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NZ_CP009273 | 807,177 | 0 | T | G | 38.3% | 95.1 / 12.5 | 61 | V67G (GTG→GGG) | bioC | malonyl‑ACP O‑methyltransferase BioC |
| Reads supporting (aligned to +/- strand): ref base T (5/32); new base G (22/1); total (28/33) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.15e-10 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
| Rejected as consensus: Frequency below/above cutoff threshold. | |||||||||||
CCGCTGCGCATGAAATGCAGGATATCGACCGTCTGCTGGAGGTGCTGCATGGCAACGGTTAATAAACAAG‑CCATTGCAGCGGCATTTGGTCGGGCAGCCGCACACTATGAGCAACATGCAGATCTACAGCGCCAGAGTGCTGACGCCTTACTGGCAAT‑GCTTCCACAGCGTAAATACACCCACGTACTGGACGCGGGTTGTGG‑ACCTGGCTGGATGAGCCGCCACTGGCGGGAACGTCACGC‑GCAGGTGACGGCCTTAGATCTCTCGCCGCCAAT‑GCTTGT‑TCAGGCACGCCAGAAGGATGCCGCAGACCATTATCTGGCGGGAGATATCGAATCCCTG‑CCGTTAGCGACTGCGACGTTCGATCTTGCATGGAGCAATCTCGCAGTGCAGTGGTGCGGTAATTTATCCACGGCACTCCGCGAGCTGTATCGGGTGGTGCGCCCCAAAGGCGTGGTCGCGTTTACCACGCTGGTGCAGGGATCGTTACCCGAACT > NZ_CP009273/806930‑807423 | ccGCGGCGCATGAAATGCAGGATATCGCCCGTCTGCTGGAGGTGCTGCATGGCAACGGTTAATAAACAAG‑CCATTGCAGCGGCATTTGGTCGGGCAGCCGCACACTATGAGCAACATGCAGATCTACAGCGCCAGAGTGCTGACGCCTTACTGGCAAT‑GCTTCCACAGCGTAAATACACCCACGTACTGGACGCGGGTTGTGG‑ACCTGGCTGGATGAGCCGCCACTGGCGGGAACGTCACGC‑GCAGGTGa < 2:351990/250‑1 (MQ=255) cTGCGCATGAAATGCAGGATATCGACCGTCTGCTGGAGGTGCTGCATGGCAACGGTTAATAAACAAG‑CCATTGCAGCGGCATTTGGTCGGGCAGCCGCACACTATGAGCAACATGCAGATCTACAGCGCCAGAGTGCTGACGCCTTACTGGCAAT‑GCTTCCACAGCGTAAATACACCCACGTACTGGACGCGGGTTGTGG‑ACCTGGCTGGATGAGCCGCCACTGGCGGGAACGTCACGC‑GCAGGTGACgg < 1:599843/250‑1 (MQ=255) cTGCGCATGAAATGCAGGATATCGACCGTCTGCTGGAGGTGCTGCATGGCAACGGTTAATAAACAAG‑CCATTGCAGCGGCATTTGGTCGGGCAGCCGCACACTATGAGCAACATGCAGATCTACAGCGCCAGAGTGCTGACGCCTTACTGGCAAT‑GCTTCCACAGCGTAAATACACCCACGTACTGGACGCGGGTTGTGG‑ACCGGGCTGGATGAGCCGCCACTGGCGGGAACGTCACGC‑GCAGGTGACgg < 1:429918/250‑1 (MQ=255) cAGGATACCGACCGTTGGCTGGGGGTGCGGCATGGCAACGGTTAATAAACAAG‑CCATTGCAGCGGCATTTGGTCGGGCAGCCGCACACTATGAGCAACATGCAGATCTACAGCGCCAGAGTGCTGACGCCTTACTGGCAAT‑GCTTCCACAGCGTAAATACACCCACGTACTGGACGCGGGTTGTGG‑ACCTGGCTGGATGAGCCGCCACTGGCGGGAACGTCACGC‑GCAGGTGACGGCCTTAGATCTCTcg < 2:120790/250‑1 (MQ=255) aGGATAGCGACCGTCTGGTGGAGGTGCGGCAGGGAACCGGCTAATAAACAAG‑CCATTGCAGCGGCATTTGGTCGGGCAGCCGCACACTATGAGCAACATGCAGATCTACAGCGCCAGAGTGCTGACGCCTTACTGGCAAT‑GCTTCCACAGCGTAAATACACCCACGTACTGGACGCGGGTTGTGG‑ACCTGGCTGGATGAGCCGCCACTGGCGGGAACGTCACGC‑GCAGGTGACGGCCTTAGATCTCTcgc < 2:158474/250‑1 (MQ=255) atatCGACCGTCTGCTGGAGGTGCTGCATGGCAACGGTTAATAAACAAG‑CCATTGCAGCGGCATTTGGTCGGGCAGCCGCACACTATGAGCAACATGCAGATCTACAGCGCCAGAGTGCTGACGCCTTACTGGCAAT‑GCTTCCACAGCGTAAATACACCCACGTACTGGACGCGGGTTGTGG‑ACCTGGCTGGATGAGCCGCCACTGGCGGGAACGTCACGC‑GCAGGTGACGGCCTTAGATCTCTcgccgc < 1:172748/250‑1 (MQ=255) gACCGTCTGCTGGAGGTGCTGCATGGCAACGGTTAATAAACAAG‑CCATTGCAGCGGCATTTGGTCGGGCAGCCGCACACTATGAGCAACATGCAGATCTACAGCGCCAGAGTGCTGACGCCTTACTGGCAAT‑GCTTCCACAGCGTAAATACACCCACGTACTGGACGCGGGTTGTGG‑ACCTGGCTGGATGAGCCGCCACTGGCGGGAACGGACCCG‑GCAGGGGACGGCCTTAGATCTTTCCCCCCCAAT‑g > 1:702335/1‑250 (MQ=255) gTCTGCTGGAGGTGCTGCATGGCAACGGTTAATAAACAAG‑CCATTGCAGCGGCATTTGGTCGGGCAGCCGCACACTATGAGCAACATGCAGATCTACAGCGCCAGAGTGCTGACGCCTTACTGGCAAT‑GCTTCCACAGCGTAAATACACCCACGTACTGGACGCGGGTTGTGG‑ACCTGGCTGGATGAGCCGCCACTGGCGGGAACGGCACGC‑GCCGGGGACGGCCCTCGAACCCTCCCCGCCACA‑GCTTg > 1:655939/1‑250 (MQ=255) tgctgGAGGGGCTGAATGGCAACGGTAAATAAACAAG‑CCATTGCAGCGGCATTTGGTCGGGCAGCCGCACACTATGAGCAACATGCAGATCTACAGCGCCAGAGTGCTGACGCCTTACTGGAAAT‑GCTCCCACAGCGTAAATACACCCACGTACTGGACGCGGGTTGTGG‑ACCTGGCTGGATGAGCCGCCACTGGCGGGAACGTCACGC‑GCAGGTGACGGCCTTAGATCTCTCGCCGCCAAT‑GCTTGT‑Tc < 2:321867/250‑1 (MQ=255) gctgGAGGTGCTGCATGGCAACGGTTAATAAACAAG‑CCATTGCAGCGGCATTTGGTCGGGCAGCCGCACACTATGAGCAACATGCAGATCTACAGCGCCAGAGTGCTGACGCCTTACTGGCAAT‑GCTTCCACAGCGTAAATACACCCACGTACTGGACGCGGGTTGTGG‑ACCTGGCTGGATGAGCCGCCACTGGCGGGGACGGCACGC‑GCCGGGGGCGGCCTTTGAGCTCTCGCCGCCCAT‑GCCTGG‑Tcc > 1:793861/1‑249 (MQ=255) ggAGGTGCTGCATGGCAACGGTTAATAAACAAG‑CCATTGCAGCGGCATTTGGTCGGGCAGCCGCACACTATGAGCAACATGCAGATCTACAGCGCCAGAGTGCTGACGCCTTACTGGCAAT‑GCTTCCACAGCGTAAATACACCCACGTACTGGACGCGGGTTGTGG‑ACCTGGCTGGATGAGCCGCCACTGGCGGGAACGTCACGC‑GCAGGGGACGGGCCTAGATCTCTCGCCGCCCAT‑GCTTGT‑TCAgg > 1:720211/1‑249 (MQ=255) ggTGCTGCATGGCAACGGTTAATAAACAAG‑CCATTGCAGCGGCATTTGGTCGGGCAGCCGCACACTATGAGCAACATGCAGATCTACAGCGCCAGAGTGCTGACGCCTTACTGGCAAT‑GCTTCCACAGCGTAAATACACCCACGTACTGGACGCGGGTTGTGG‑ACCTGGCTGGATGAGCCGCCACTGGCGGGAACGTCACGC‑GCAGGTGACGGCCTTAGATCTCTCGCCGCCAAT‑GCTTGT‑TCAGGCACg < 1:601684/250‑1 (MQ=255) gTGCTGCATGGCAACGGTTAATAAACAAG‑CCATTGCAGCGGCATTTGGTCGGGCAGCCGCACACTATGAGCAACATGCAGATCTACAGCGCCAGAGTGCTGACGCCTTACTGGCAAT‑GCTTCCACAGCGTAAATACACCCACGTACTGGACGCGGGTTGTGG‑ACCTGGCTGGATGAGCCGCCACTGGCGGGAACGTCACGC‑GCAGGTGACGGCCTTAGATCTCTCGCCGCCAAT‑GCTTGT‑TCAGGCACGc < 1:448031/250‑1 (MQ=255) tgcATGGCAACGGTTAATAAACAAG‑CCATTGCAGCGGCATTTGGTCGGGCAGCCGCACACTATGAGCAACATGCAGATCTACAGCGCCAGAGTGCTGACGCCTTACTGGCAAT‑GCTTCCACAGCGTAAATACACCCACGTACTGGACGCGGGTTGTGG‑ACCTGGCTGGATGAGCCGCCACTGGCGGGGACCTGACAC‑GCCGGGGAGGGGCTCTGCGCTCCAGCCGCCAAA‑GCGTGTCTCAGGccgccg > 2:665695/1‑243 (MQ=255) cATGGCAACGGTTAATAAACAAG‑CCATTGCAGCGGCATTTGGTCGGGCAGCCGCACACTATGAGCAACATGCAGATCTACAGCGCCAGAGTGCTGACGCCTTACTGGCAAT‑GCTTCCACAGCGTAAATACACCCACGTACTGGACGCGGGTTGTGG‑ACCTGGCTGGATGAGCCGCCACTGGCGGGAACGTCACGC‑GCAGGTGACGGCCTTAGATCTCTCGCCGCCAAT‑GCTTGT‑TCAGGCACGCCAGa < 1:633916/248‑1 (MQ=255) ggTTAATAAACAAG‑CCATTGCAGCGGCATTTGGTCGGGCAGCCGCACACTATGAGCAACATGCAGATCTACAGCGCCAGAGTGCTGACGCCTTACTGGCAAT‑GCTTCCACAGCGTAAATACACCCACGTACTGGACGCGGGTTGTGG‑ACCTGGCTGGATGAGCCGCCACTGGCGGGAACGTCACGC‑GCAGGTGACGGCCTTAGATCTCTCGCCGCCAAT‑GCTTGT‑TCAGGCACGCCAGAAGGATGCCGCa < 1:91168/250‑1 (MQ=255) ttAAT‑AACAAGCCCATTGCAGCGGCATTTGGTCGGGCAGCCGCACACTATGAGCAACATGCAGATCTACAGCGCCGGAGTGCTGACGCCTTACTGGCAAT‑GCTTCCACGGCGTAAATACACCCACGTACTGGACGCGGGTTGTGG‑ACCTGGCTGGATGAGCCGCCACTGGCGGGAACGTCACGC‑GCAGGTGACGGCCTTAGATCTCTCGCCGCCAAT‑GCTTGT‑TCAGGCACGCCAGAAGGATGCCGCAGa < 2:139252/250‑1 (MQ=255) aG‑CCATTGCAGCGGCATTTGGTCGGGCAGCCGCACACTATGAGCAACATGCAGATCTACAGCGCCAGAGTGCTGACGCCTTACTGGCAAT‑GCTTCCACAGCGTAAATACACCCACGTACTGGACGCGGGTTGTGG‑ACCTGGCTGGATGAGCCGCCACTGGCGGGAAAGTCACGC‑GCAGGTGACGGCCTTAGATCTCTCGCCCCCAAT‑GCTTTT‑TTTGGCACGCCAGAAGGATGCCGCACACCCTTATCTg > 1:804160/1‑250 (MQ=255) g‑CCATTGCAGCGGCATTTGGTCGGGCAGCCGCACACTATGAGCAACATGCAGATCTACAGCGCCAGAGTGCTGACGCCTTACTGGCAAT‑GCTTCCACAGCGTAAATACACCCACGTACTGGACGCGGGTTGTGG‑ACCTGGCTGGATGAGCCGCCACTGGCGGGAACGTCACGC‑GCAGGGGACGGCCCTAGATCTCTCGCCGCCAAT‑GCTTGT‑TCAGGCACGCCCGAAGGATGCCGCAGACCCTTATCTgg > 1:8231/1‑250 (MQ=255) ccATTGCAGCGGCATTTGGTCGGGCAGCCGCACACTATGAGCAACATGCAGATCTACAGCGCCAGAGTGCTGACGCCTTACTGGCAAT‑GCTTCCACAGCGTAAATACACCCACGTACTGGACGCGGGTTGTGG‑ACCTGGCTGGATGAGCCGCCACTGGCGGGAACGTCACGC‑GCAGGTGACGGCCTTAGATCTCTCGCCGCCAAT‑GCTTGT‑TCAGGCACGCCAGAAGGATGCCGCAGACCATTATCTGGc < 1:247841/250‑1 (MQ=255) tGCAGCGGCATTTGGTCGGGCAGCCGCACACTATGAGCAACATGCAGATCTACAGCGCCAGAGTGCTGACGCCTTACTGGCAAT‑GCTTCCACAGCGTAAATACACCCACGTACTGGACGCGGGTTGTGG‑ACCTGGCTGGATGAGCCGCCACTGGCGGGGACGTCACGC‑GCAGGGGACGGCCTTAGATCTCTCGCCGCCCAT‑GCTTGT‑TCAGGCACGCCAGAAGGATGCCGCAGACCATTATCTGGCgg > 1:389652/1‑248 (MQ=255) cAGCGGCATTTGGTCGGGCAGCCGCACACTATGAGCAACATGCAGATCTACAGCGCCAGAGTGCTGACGCCTTACTGGCAAT‑GCTTCCACAGCGTAAATACACCCACGTACTGGACGCGGGTTGTGG‑ACCTGGCTGGATGAGCCGCCACTGGCGGGAACGTCACGC‑GCAGGGGACGGCCTTAGATCTCTCGCCGCCAAT‑GCTTGT‑TTAGGCACGCCCGAAGGATGCCGCAGACCCATATCTGGCGGga > 1:827232/1‑248 (MQ=255) gCGGCATTTGGTCGGGCAGCCGCACACTATGAGCAACATGCAGATCTACAGCGCCAGAGTGCTGACGCCTTACTGGCAAT‑GCTTCCACAGCGTAAATACACCCACGTACTGGACGCGGGTTGTGG‑ACCTGGCTGGATGAGCCGCCACTGGCGGGAAAGGCACGC‑GCAGGGGACGGCCTTAGATCTCTCGCCCCCAAA‑GCTTGT‑TTAGGCACCCCCGAAGGGAGGCCCAGGCCATTATCTGGCggggggta > 1:443804/1‑245 (MQ=255) cATTTGGTCGGGCAGCCGCACACTATGAGCAACATGCAGATCTACAGCGCCAGAGTGCTGACGCCTTACTGGCAAT‑GCTTCCACAGCGTAAATACACCCACGTACTGGACGCGGGTTGTGG‑ACCTGGCTGGATGAGCCGCCACTGGCGGGGACGCCCCGC‑GCAGGGGACGGCCCTAGATCTCCCCCCGCCCAT‑GCCTGT‑CCACGCACGCCCGGTGGAGGCCGCAGAACATTATCTCGCgggcgtttttga > 2:22814/1‑241 (MQ=255) cATTTGGTCGGGCAGCCGCACACTATGAGCAACATGCAGATCTACAGCGCCAGAGTGCTGACGCCTTACTGGCAAT‑GCTTCCACAGCGTAAATACACCCACGTACTGGACGCGGGTTGTGG‑ACCTGGCTGGATGAGCCGCCACTGGCGGGAACGTCACGC‑GCCGGGGACGGCCCTAGATCTCTCGCCGCCCAT‑GCTTGT‑TCCGGCACGCCAGAAGGGTGCCGCAGACCATTATCTGGCGGGGGGTATCg > 1:560927/1‑249 (MQ=255) aTTTGGTCGGGCAGCCGCACACTATGAGCAACATGCAGATCTACAGCGCCAGAGTGCTGACGCCTTACTGGCAAT‑GCTTCCACAGCGTAAATACACCCACGTACTGGACGCGGGTTGTGG‑ACCTGGCTGGATGAGCCGCCACTGGCGGGAACGTCACGC‑GCAGGGGACGGCCTTAGATCTCTCGCCGCCAAT‑GCTTGT‑TCAGGCACGCCAGAAGGATGCCGCCGACCATTCTCTTGCGGGGGATATCGaa > 1:462499/1‑250 (MQ=255) tttGGTCGGGCAGCCGCACACTATGAGCAACATGCAGATCTACAGCGCCAGAGTGCTGACGCCTTACTGGCAAT‑GCTTCCACAGCGTAAATACACCCACGTACTGGACGCGGGTTGTGG‑ACCTGGCTGGATGAGCCGCCACTGGCGGGAACGTCACGC‑GCAGGGGACGGCCCTAGATCTCTCGCCGCCAAT‑GCTTGT‑TCAGGCACGCCAGAAGGATGCCGCAGACCATTATCTGGCGGGGGATATCGAAt > 1:257186/1‑250 (MQ=255) gTCGGGCAGCCGCACACTATGAGCAACATGCAGATCTACAGCGCCAGAGTGCTGACGCCTTACTGGCAAT‑GCTTCCACAGCGTAAATACACCCACGTACTGGACGCGGGTTGTGG‑ACCTGGCTGGATGAGCCGCCACTGGCGGGAACGTCACGC‑GCAGGTGACGGCCTTAGATCTCTCGCCGCCAAT‑GCTTGT‑TCAGGCACGCCAGAAGGATGCCGCAGACCATTATCTGGCGGGAGATATCGAATCCCt < 1:869573/250‑1 (MQ=255) gggaGCCGGACGCGATGGACAACATGCAGTTTGACCGCGCCAGAGTGCGTCCCCCTTTCTGGAAAT‑GTTTCCACAGCGTAAATCCGCCCACGTGCGGGACGGGGGTTGTGG‑ACCTGGCTGGAGGGGCCGCCACTGGCGGGAACGTCACGC‑GCAGGTGACGGCCTTAGATCTCTCGCCGCCAAT‑GCTTGT‑TCAGGCACGCCAGAAGGATGCCGCAGACCATTATCTGGCGGGAGATATCGAATCCCTG‑CCg < 2:446813/247‑1 (MQ=255) cggCCGCACACTAGGGGAACCAGGCGGATCTACAGCGCCAGGGTCCTGCCCCCTTAC‑GGCAATGGCTCCCACGGCGAAAATCCCCCCACGTGCGGGAGGGGGGTTGTGG‑CCCGGGGTGGATGGGCCGCCACTGGCGGGACCGTCACGC‑GCAGGTGACGGCCTTAGATCTCTCGCCGCCAAT‑GCTTGT‑TCAGGCACGCCAGAAGGATGCCGCAGACCATTATCTGGCGGGAGATATCGAATCCCTG‑CCGtt < 2:455732/248‑1 (MQ=255) caacacTATGACCAGCATGCAGATCACCAGCGCCAGGGTGCGGACGCCTTCCGGGCATG‑GCTTCCACGGAGTAAACACCCCCACGTACTGGACGCGGGTTGTGG‑CCCGGGCTGGATGAGCCGCCACTGGCGGGAACGTCCCGC‑GCAGGTGACGGCCTTAGATCTCTCGCCGCCAAT‑GCTTGT‑TCAGGCACGCCAGAAGGATGCCGCAGCCCATTATCTGGCGGGAGATATCGAATCCCTG‑CCGTTAGCGa < 2:639576/248‑1 (MQ=255) cacaCTATGAGCAACATGCAGATCTACAGCGCCAGAGTGCTGACGCCTTACTGGCAAT‑GCTTCCACAGCGTAAATACACCCACGTACTGGACGCGGGTTGTGG‑ACCTGGCTGGATGAGCCGCCACTGGCGGGAAACGCCCGCGGCGGGGGCGGGCCTTAG‑TTTCTCCGCGCCAATGGCTGGT‑CCAGGC‑CGCCCGCAGGATGGCGCAGACCCTTTACCGGCGGGGGGGATCCAATCCCTGCCCGTTAgggc > 2:213915/1‑247 (MQ=255) acacAATGAGCAACATGCAGATCTACAGCGCAAGAGTGCTGACGCCTTACTGGAAAT‑GCTTCCACAGCGTAAATACACCCACGTACTGGACGCGGGTTGTGG‑ACCGGGCTGGATGGGCCGCCACTGGCGGGAACGTCACGC‑GCAGGTGACGGCCTTAGATCTCTCGCCGCCAAT‑GCTTGT‑TCAGGCACGCCAGAAGGATGCCGCAGACCATTATCTGGCGGGAGATATCGAATCCCTG‑CCGTTAGCGACt < 1:923257/250‑1 (MQ=255) cacTATGAGCAACATGCAGATCTACAGCGCCAGAGTGCTGACGCCTTACTGGCAAT‑GCTTCCACAGCGTAAATACACCCACGTACTGGACGCGGGTTGTGG‑ACCTGGCTGGATGAGCCGCCACTGGCGGGAACGTCACGC‑GCAGGGGACGGCCTTAGATCTCTCGCCGCCAAT‑GCTTGT‑TCAGGCACGCCAGAAGGATGCCGCAGACCATTATCTGGCGGGAGATATCGAATCCCTG‑CCGGTAGCGACTg > 1:460563/1‑250 (MQ=255) acTATGAGCAACAGGCAGATCTACAGCGCCAGAGTGCTGACGCCTTACTGGAAAT‑GCTTCCACAGCGTAAATACACCCACGTACTGGACGCGGGTTGTGG‑ACCTGGCTGGATGAGCCGCCACTGGCGGGAACGTCACGC‑GCAGGTGACGGCCTTAGATCTCTCGCCGCCAAT‑GCTTGT‑TCAGGCACGCCAGAAGGATGCCGCAGACCATTATCTGGCGGGAGATATCGAATCCCTG‑CCGTTAGCGACTGc < 1:837620/250‑1 (MQ=255) ggAGCAACATGCAGAACTACAGCGCCAGAGTGCTGACGCCTTACTGGCAAT‑GCTCCCACAGCGAAAATACACCCACGTACTGGACGCGGGTTGTGG‑ACCTGGCTGGATGAGCCGCCACTGGCGGGAACGTCACGC‑GCAGGTGACGGCCTTAGATCTCTCGCCGCCAAT‑GCTTGT‑TCAGGCACGCCAGAAGGATGCCGCAGACCATTATCTGGCGGGAGATATCGAATCCCTG‑CCGTTAGCGACTGCGAc < 1:425160/248‑1 (MQ=255) aaCATGCAGATCTACAGCGCCAGAGTGCTGACGCCTTACTGGCAAT‑GCTTCCACAGCGTAAATACACCCACGTACTGGACGCGGGTTGTGG‑ACCTGGCTGGATGAGCCGCCACTGGCGGGAACGTCACGC‑GCAGGGGACGGCCTTAGATCTCTCGCCGCCCAT‑GCTTGT‑TCAGGCACGCCAGAAGGATGCCGCAGACCATTATCTGGCGGGAGATATCGAATCCCTG‑CCGTTAGCGACTGCGACGTTCGa > 1:544968/1‑250 (MQ=255) cagtccccgaGCGCCAGGGTGCGGAGTCCTAACGGGCATG‑GCTCCAACGGCGAAAATCCCCCCACGT‑CGGGGCGGGGGTTGTGGAACCGGGCGGGAGGCCCCGCCACGGGCGGGAACGTCACGC‑GCGGGTGACGGCCTTAGACCTCTCGCCGCCAAT‑GCTTGT‑TCAGGCACGCCAAAAGGATGCCGCAGACCATTATCTGGCGGGAGATATCGAATCCCTG‑CCGTTAGCGACTGCGACGTTCGATCTTGc < 2:517186/241‑1 (MQ=255) aGATCAACAGCCGCAGTGTCCTCACGCTTTATGGGCAAT‑ACTCCCACAGGGTAATCACACCCACGTACGGGACGCGGGTTGGGG‑ACCTGGCGGGATGAGCCGCCACTGGCGGGAACGTCACGC‑GCAGGTGACGGCCTTAGATCTCTCGCCGCCAAT‑GCTTTT‑CCAGGCACGCCAGAAGGATGCCGCAGCCCATTATCGGGCGGGAGATATCGAATCCCTG‑CCGTTAGCGACTGCGACGTTCGATCTTGCa < 2:315389/250‑1 (MQ=255) aTCTACAGCGCCAGAGTGCTGACGCCTTACTGGCAAT‑GCTTCCACAGCGTAAATACACCCACGTACTGGACGCGGGTTGTGG‑ACCTGGCTGGATGAGCCGCCACTGGCGGGAAAGTCCCCC‑CCCGGGGGCGGCCTTAGATCCCTCGCCGCCCAT‑GCTCGT‑TCAGGCCCGCCCGCAGGATGCCGCCGACCCTTATCCCGCGGGGGGAAACGAACCCCTC‑CCCTTCGCCACCGCAGCGTTCGTAcatgcatg > 2:900873/1‑250 (MQ=255) gcCAGAGTGCTGACGCCTTACTGGCAAT‑GCTTCCACAGCGTAAATACACCCACGTACTGGACGCGGGTTGTGG‑ACCTGGCTGGATGAGCCGCCACTGGCGGGGAAGTCACGC‑GCCGGCGACCGCCCTAGATTTTGCGCCGCCAAT‑TCGTGC‑TCAGGCACGCCACAACGATGCCGCCGACCACTATTTGGGCGGAGATATCGTATACCCG‑CCGCTAGAGGCTGCGACGTTCGACCGTGCCTGGAggcatcc > 2:708861/1‑244 (MQ=255) tGCTGACGCCTTACTGGCAAT‑GCTTCCACAGCGTAAATACACCCACGTACTGGACGCGGGTTGTGG‑ACCTGGCTGGATGAGCCGCCACTGGCGGGAACGTCACCC‑GCAGGGGAAGGCCCTAGATCTCTCCCCGCCCCA‑GCCTGT‑TCAGGCACGCCCGAAGGATGCCGCACGCCCCTATCTGGCGGGAGGTATTTACACCCCG‑CCGTTTGCGACCGGCACGTTCCAGCCTTCATGGACCAATCACccaggg > 2:246877/1‑248 (MQ=255) aCGCCTTACTGGCAAT‑GCTTCCACAGCGTAAATACACCCACGTACTGGACGCGGGTTGTGG‑ACCTGGCTGGATGAGCCGCCACTGGCGGGAACGTCACGC‑GCCGGGGGCGGCCCTTGATCTCTCCCCCCCAAT‑GCTTTT‑TCCAGCACGCCCGAAGGATGCCGCCGACCCTTATTTTGCGGGGGGTATTGAATTCCTG‑CCGTTAGCCGCTGCGGCGTTCGATCTTTCATGGGGGAATCTCgcagtggagcg > 2:285200/1‑248 (MQ=255) ccccTTCCTGGCAAT‑GCTTCCACAGCGTAAATCCCCCCCCGTACGGGACGCGGTTTGTGG‑ACCTGGCTGGATGAGCCGCCACTGGCGGGAACGTCACGC‑GCAGGTGACGGCCTTAGATCTCTCGCCGCCAAT‑GCTTGT‑TCAGGCACGCCAGAAGGATGCCGCAGACCATTATCTGGCGGGAGATATCGAATCCCTG‑CCGTTAGCGACTGCGACGTTCGATCTTGCATGGAGCAATCTCGCAGTGCAgtgg < 1:886153/248‑1 (MQ=255) aCTGGCAAT‑GCTTCCACAGCGTAAATACACCCACGTACTGGACGCGGGTTGTGG‑ACCTGGCTGGATGAGCCGCCACTGGCGGGAACGCCACGC‑GCAGGGGAGCGCCTTAGATCTCTCGCCCCCAAT‑GCTTGT‑TCCGGCACGCCCGACGGAGGCCGCCGACCATTCTCTGGCGGGGGAAATCGGATCCCCT‑CCGTTAGCGCCAGCGACGGTCGAGCTTGCCGGGAGCAATCTCTCAGTGCAGTGGGGCggg > 2:847231/1‑249 (MQ=255) cgggCAAT‑GCTTCCACGGGGAAAACACCCCCGCTGCCTGGGCGCGGGTGGGGG‑CCCGGGCTGGAGGAGCCGCCACGGGCGGGAAGGTCACGC‑GCAGGTGCCGGCCTTAGATCTCTCGCCGCCAAT‑GCTTGT‑TCAGGCACGCCAGAAGGATGCCGCAGACCATTATCTGGCGGGAGATAGCGAATCCCTG‑CCGTTAGCGACTGCGACGTTCGATCTTGCATGGAGCAATCTCGCAGTGCAGTGGTGCGGTa < 2:508955/248‑1 (MQ=255) ccACAGCGTAAATACACCCACGTACTGGACGCGGGTTGTGG‑ACCTGGCTGGATGAGCCGCCACTGGCGGGAACGTCACGC‑GCAGGGGACGGCCTTAGATCTCTCGCCGCCAAT‑GCTTGT‑TCAGGCACGCCAGAAGGATGCCGCAGACCATTATCTGGCGGGAGATATCGAATCCCTG‑CCGTTAGCGACTGCGACGGTCGATCTTGCATGGAGCAATCTCGCAGTGCAGTGGGGCGGGAATTTATTCCCgg > 1:794132/1‑250 (MQ=255) cgaaaaCACACCCCCGTGCGGGACGCGGGTTGTGG‑CCCTGGCGGGATGAGCCGCCACTGGCGGGAACGTCACGC‑GCAGGTGACGGCCTTAGATCTCTCGCCGCCAAT‑GCTTGT‑TCAGGCACGCCAGAAGGATGCCGCAGACCATTATCTGGCGGGAGATATCGAATCCCTG‑CCGTTAGCGACTGCGACGTTCGATCTTGCATGGAGCAATCTCGCAGTGCAGTGGTGCGGTAATTTATCCACGGCACTcc < 1:178543/247‑1 (MQ=255) cGTAAATACACCCACGTACTGGACGCGGGTTGTGG‑ACCTGGCTGGATGAGCCGCCACTGGCGGGAACGTCACGC‑GCAGGTGACGGCCTTAGATCTCTCGCCGCCAAT‑GCTTGT‑TCAGGCACGCCCGAAGGATGCCGCAGACCATTATCTGGCGGGAGATATCGAATCCCTG‑CCGTTAGCGACCGCGACGTTCGATCTTGCATGGAGCAATCTCGCAGGGCCGTGGGGCGGGGATTTATCCACGGGACTcc > 1:94750/1‑250 (MQ=255) aCGTACGGGACGGGGGTTGGGG‑ACCGGGGTGGAGGAGCCGCCGCTGGCGGGAACGTCACGC‑GCAGGTGACGGCCTTAGACCTCTCGCCGCCAAT‑GCTTGT‑TCAGGCCCGCCAGAAGGATGCCGCAGACCATTATCTGGCGGGAGATATCGAATCCCTG‑CCGTTAGCGACTGCGACGTTCGATCTTGCATGGAGCAATCTCGCAGTGCAGTGGTGCGGTAATTTATCCACGGCACTCCGCGAGCTGTATCg < 1:565402/250‑1 (MQ=255) aCGCGGGTTGTGG‑ACCTGGCTGGATGAGCCGCCACTGGCGGGAACGTCACGC‑GCAGGGGGCGGGCCTAGATCTCTCGCCGCCCAT‑GCTTGT‑TTCGGCACGCCAGAAGGATGCCGCAGACCCTTATCTGGCGGGGGATATTGAAACCCCG‑CCGTTTGCGGCTGCGCCGTTCCAGCTTTCATGGGGCAATCTCGCAGGGCAGGGGGGCGGGAATTTATTCCCGGCACACCCCGAGCTGTATCgggggggggg > 2:237919/1‑246 (MQ=255) gggTTGTGG‑ACCTGGCTGGATGAGCCGCCACTGGCGGGAACGTCACGC‑GCAGGTGACGGCCTTAGATCTCTCGCCGCCAAT‑GCTTGT‑TCAGGCACGCCAGAAGGATGCCGCAGACCATTATCTGGCGGGGGATATCGAATCCCTG‑CCGTTAGCGACTGCGACGTTCGAt > 1:126976/1‑169 (MQ=255) gTTGGGG‑CCCGGGGTGGAGGAGCCGCCACTGGCGGGAACGTCACGC‑GCAGGTGACGGCCTTAGATCTCTCGCCGCCAAT‑GCTTGT‑TCAGGCACGCCAGAAGGATGCCGCAGACCATTATCGGGCGGGAGATATCGAATCCCTG‑CCGTTAGCGACTGCGACGTTCGATCTTGCATGGAGCAATCTCGCAGTGCAGTGGTGCGGTAATTTATCCACGGCACTCCGCGAGCTGTATCGGGTGGTGCGCCCCaa < 2:364379/250‑1 (MQ=255) ccgccCCTGGCGGGAACGTCCCGC‑GCAGGTGACGGCCTTAGATCTCTCGCCGCCAAT‑GCTTGT‑TCAGGCACGCCAGAAGGATGCCGCAGACCATTATCTGGCGGGAGATATCGAATCCCTG‑CCGTTAGCGACTGCGACGTTCGATCTTGCATGGAGCAATCTCGCAGTGCAGTGGTGCGGTAATTTATCCACGGCACTCCGCGAGCTGTATCGGGTGGTGCGCCCCAAAGGCGTGGTCGCGTTTACCACg < 1:608203/250‑1 (MQ=255) ccgccACTGGCGGGAACGTCACGC‑GCAGGTGACGGCCTTAGATCTCTCGCCGCCAAT‑GCTTGT‑TCAGGCACGCCAGAAGGATGCCGCAGACCATTATCTGGCGGGAGATATCGAATCCCTG‑CCGTTAGCGACTGCGACGTTCGATCTTGCATGGAGCAATCTCGCAGTGCAGTGGTGCGGTAATTTATCCACGGCACTCCGCGAGCTGTATCGGGTGGTGCGCCCCAAAGGCGTGGTCGCGTTTACCACg < 1:564518/250‑1 (MQ=255) gcccttgtcGGGAACGTCCGGC‑GCAGTTGGCGTCCTAAGACCTTTCGCCGCCAAT‑GCTTGT‑TCAGGCACGCCAGAAGGATGCCGCAGACCATTATCTGGCGGGGGATATCGAACCCCTG‑CCGTTAGCGACTGCGACGTTCGATCTTGCATGGAGCAATCTCGCAGTGCAGTGGTGCGGTAATTTATCCACGGCACTCCGCGAGCTGTATCGGGTGGTGCGCCCCAAAGGCGTGGTCGCGTTTACCACGCt < 2:546985/242‑1 (MQ=255) gccACTGGCGGGAACGTCACGC‑GCAGGTGACGGCCTTAGATCTCTCGCCGCCAAT‑GCTTGT‑TTAGGCACGCCAGAAGGATGCCGCAGACCATTATCTGGCGGGGGATATCGAATCCCTG‑CCGTTTGCGACTGCGACGTTCGATCTTGCATGGAGCAATCTCCCAGTGCAGTGGGGCGGTAATTTTTTCACCGCACTCCGCGCGGTGTATCGGGGGGGGCGCCCCCAAGGCGGGGGGGCGGTTTCCCCGCt > 2:358121/1‑250 (MQ=255) ggAACGTCACGC‑GCGGGGGCTGGCCTTAGCTCTCTCGCGCCCAAT‑GCTTGT‑TCAGCCACGCCAGAAGGTGGCCGCAGCCCATTATCTGGCGGGAGATTTCGAATCCCTG‑CCGTTAGCGACTGCGACGTTCGATCTTGCATGGAGCAATCTCGCAGTGCAGTGGTGCGGTAATTTATCCACGGCACTCCGCGAGCTGTATCGGGTGGTGCGCCCCAAAGGCGTGGTCGCGTTTACCACGCTGGTGCAGGGa < 2:588672/250‑1 (MQ=255) cGTCACGC‑GCAGGTGACGGCCTTAGATCTCTCGCCGCCAAT‑GCTTGT‑TCAGGCACGCCAGAAGGATGCCGCAGACCATTATCTGGCGGGAGATATCGAATCCCTG‑CCGTTAGCGACTGCGACGTTCGATCTTGCATGGAGCAATCTCGCAGTGCAGTGGTGCGGTAATTTATCCACGGCACTCCGCGAGCTGTATCGGGTGGTGCGCCCCAAAGGCGTGGTCGCGTTTACCACGCTGGTGCAGGGATCGt < 1:58607/250‑1 (MQ=255) aCGC‑GCAGGTAACGGCCTTAGATCTCGCGCCGCCAAG‑GCTTGT‑TCAGGCACGCCAGAGGGATGCCGCAGACCATTATCTGGCGGGAGATATCGAATCCCTG‑CCGTTAGCGACTGCGACGTTCGATCTTGCATGGAGCAATCTCGCAGTGCAGTGGTGCGGTAATTTATCCACGGCACTCCGCGAGCTGTATCGGGTGGTGCGCCCCAAAGGCGTGGTCGCGTTTACCACGCTGGTGCAGGGATCGTTAc < 1:714/249‑1 (MQ=255) aGGTGACGGCCTTAGATCTCTCGCCGCCAAT‑GCTTGT‑TCAGGCACGCCAGAAGGATGCCGCAGACCATTATCTGGCGGGAGATATCGAATCCCTG‑CCGTTAGCGACTGCGACGTTCGATCTTGCATGGAGCAATCTCGCAGTGCAGTGGTGCGGTAATTTATCCACGGCACTCCGCGAGCTGTATCGGGTGGTGCGCCCCAAAGGCGTGGTCGCGTTTACCACGCTGGTGCAGGGATCGTTACCCGAACt > 1:102988/1‑250 (MQ=255) | CCGCTGCGCATGAAATGCAGGATATCGACCGTCTGCTGGAGGTGCTGCATGGCAACGGTTAATAAACAAG‑CCATTGCAGCGGCATTTGGTCGGGCAGCCGCACACTATGAGCAACATGCAGATCTACAGCGCCAGAGTGCTGACGCCTTACTGGCAAT‑GCTTCCACAGCGTAAATACACCCACGTACTGGACGCGGGTTGTGG‑ACCTGGCTGGATGAGCCGCCACTGGCGGGAACGTCACGC‑GCAGGTGACGGCCTTAGATCTCTCGCCGCCAAT‑GCTTGT‑TCAGGCACGCCAGAAGGATGCCGCAGACCATTATCTGGCGGGAGATATCGAATCCCTG‑CCGTTAGCGACTGCGACGTTCGATCTTGCATGGAGCAATCTCGCAGTGCAGTGGTGCGGTAATTTATCCACGGCACTCCGCGAGCTGTATCGGGTGGTGCGCCCCAAAGGCGTGGTCGCGTTTACCACGCTGGTGCAGGGATCGTTACCCGAACT > NZ_CP009273/806930‑807423 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |