| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NZ_CP009273 | 383,643 | 0 | T | G | 43.8% | 76.6 / 11.9 | 64 | G131G (GGT→GGG) | tauD | taurine dioxygenase |
| Reads supporting (aligned to +/- strand): ref base T (10/26); new base G (28/0); total (38/26) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 4.44e-10 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
| Rejected as consensus: Frequency below/above cutoff threshold. | |||||||||||
AAGCTATTACGCCGCAGCAGCAACGCGCGCTGGCCCAGCGTTTTGGCGAATTGCATATTCACCCTGTTTACCCGCATGCCGAAGGGGTTGACGAGATCATCGTGCTGGATACCCATAACGATAATCCGCCAGATAACGACAACTGGCATACCGATGTGACATTTATTGAAACGCCACCCGCAGGGGCGATTCT‑GGCAGCTAAAGAGTTA‑CCTTCGACCGGCGG‑TGATACGCTCT‑GGACCAGCGGTATTGCGGCCTATGAGGCGCTCT‑CTGTTCCCTT‑CCGCCAGCTGCTGA‑GTGGGCTGCGTGCGGAGCATGATTTCCGTAAATCGTT‑CCCGGAATACAAATACCGCAAAACCGAGGA‑GGAACATCAACGCTGGCGCGAGGCGGTCGC‑GAAAAACCCGCCGTTGCTACATCCGGTGGTGCGAACGCATCCGGTGAGCGGTAAACAGGCGCTGTTTGTGAATGAAGGCTTTACTACGCGAATTGTTGATG > NZ_CP009273/383399‑383887 | aaGCTATTACGCCGCAGCAGCAACGCGCGCTGGCCCAGCGTTTTGGCGAATTGCATATTCACCCTGTTTACCCGCATGCCGAAGGGGTTGACGAGATCATCGTGCTGGATACCCATAACGATAATCCGCCAGATAACGACAACTGGCATACCGATGTGACATTTATTGAAACGCCACCCGCAGGGGCGATTCT‑GGCAGCTAAAGAGTTA‑CCTTCGACCGGCGG‑TGATACGCCCT‑GGACCCGCGGGAtttc > 1:33516/1‑248 (MQ=255) cTATTACGCCGCAGCAGCAACGCGCGCTGGCCCAGCGTTTTGGCGAATTGCATATTCACCCTGTTTACCCGCATGCCGAAGGGGTTGACGAGATCATCGTGCTGGATACCCATAACGATAATCCGCCAGATAACGACAACTGGCATACCGATGTGACATTTATTGAAACGCCACCCGCAGGGGCGATTCT‑GGCAGCTAAAGAGTTA‑CCTTCGACCGGCGG‑TGATACGCCCT‑GGACCCGCGGGATTGCGGc > 1:522077/1‑250 (MQ=255) tACGCCGCAGCAGCAACGCGCGCTGGCCCAGCGTTTTGGCGAATTGCATATTCACCCTGTTTACCCGCATGCCGAAGGGGTTGACGAGATCATCGTGCTGGATACCCATAACGATAATCCGCCAGATAACGACAACTGGCATACCGATGTGACATTTATTGAAACGCCACCCGCAGGGGCGATTCT‑GGCAGCTAAAGAGTTA‑CCTTCGACCGGCGG‑GGGTAAGCCCT‑GGGCCGGCGGGGTTGTGGCCtct > 2:626117/1‑248 (MQ=255) cgccgcAGCAGCAACGCGCGCTGGCCCAGCGTTTTGGCGAATTGCATATTCACCCTGTTTACCCGCATGCCGAAGGGGTTGACGAGATCATCGTGCTGGATACCCATAACGATAATCCGCCAGATAACGACAACTGGCATACCGATGTGACATTTATTGAAACGCCACCCGCAGGGGCGATTCT‑GGCAGCTAAAGAGTTA‑CCTTCGACCGGCGG‑GGAGACGCTCT‑GGGCCCTAGGGATTGCTGCCGAt > 2:687534/1‑248 (MQ=255) ggCCCAGCGTTTTGGCGAATTGCATATTCACCCTGTTTACCCGCATGCCGAAGGGGTTGACGAGATCATCGTGCTGGATACCCATAACGATAATCCGCCAGATAACGACAACTGGCATACCGATGTGACATTTATTGAAACGCCACCCGCAGGGGCGATTCT‑GGCAGCTAAAGAGTTA‑CCTTCGACCGGCGG‑TGATACGCTCT‑GGACCAGCGGGATTGCGGCCCATGAGGCGCTCT‑CTGTTTCCTT‑CCGc > 1:81614/1‑250 (MQ=255) cAGCGTTTTGGCGAATTGCATATTCACCCTGTTTACCCGCATGCCGAAGGGGTTGACGAGATCATCGTGCTGGATACCCATAACGATAATCCGCCAGATAACGACAACTGGCATACCGATGTGACATTTATTGAAACGCCACCCGCAGGGGCGATTCT‑GGCAGCTAAAGAGTTA‑CCTTCGACCGGCGG‑TGATACGCTCT‑GGACCAGCGGTATTGCGGCCTATGAGGCGCTCT‑CTGTTCCCTT‑CCGCCAgc > 1:526667/1‑250 (MQ=255) gCGTTTTGGCGAATTGCATATTCACCCTGTTTACCCGCATGCCGAAGGGGTTGACGAGATCATCGTGCTGGATACCCATAACGATAATCCGCCAGATAACGACAACTGGCATACCGATGTGACATTTATTGAAACGCCACCCGCAGGGGCGATTCT‑GGCAGCTAAAGAGTTA‑CCTTCGACCGGCGG‑TGATACGCTCT‑GGACCAGCGGGATTGCGGCCTTTGGGGCGCTCT‑CTGTTCCCTT‑CCGCCCgctg > 1:321622/1‑250 (MQ=255) gCGAATTGCATATTCACCCTGTTTACCCGCATGCCGAAGGGGTTGACGAGATCATCGTGCTGGATACCCATAACGATAATCCGCCAGATAACGACAACTGGCATACCGATGTGACATTTATTGAAACGCCACCCGCAGGGGCGATTCT‑GGCAGCTAAAGAGTTA‑CCTTCGACCGGCGG‑TGATACGCTCT‑GGACCAGCGGTATTGCGGCCTATGAGGCGCTCT‑CTGTTCCCTT‑CCGCCAGCTGCTGA‑GTgg < 2:734384/250‑1 (MQ=255) gAATTGCATATTCACCCTGTTTACCCGCATGCCGAAGGGGTTGACGAGATCATCGTGCTGGATACCCATAACGATAATCCGCCAGATAACGACAACTGGCATACCGATGTGACATTTATTGAAACGCCACCCGCAGGGGCGATTCT‑GGCAGCTAAAGAGTTA‑CCTTCGACCGGCGG‑TGATACGCTCT‑GGACCAGCGGTATTGCGGCCTATGAGGCGCTCT‑CTGTTCCCTT‑CCGCCAGCTGCTGA‑GTGGGc < 1:514320/250‑1 (MQ=255) aaTTGCATATTCACCCTGTTTACCCGCATGCCGAAGGGGTTGACGAGATCATCGTGCTGGATACCCATAACGATAATCCGCCAGATAACGACAACTGGCATACCGATGTGACATTTATTGAAACGCCACCCGCAGGGGCGATTCT‑GGCAGCTAAAGAGTTA‑CCTTCGACCGGCGG‑TGGTACGCTCT‑GGACCAGCGGGATTGCGGCCTATTGGGCGGCCC‑CTGTTCCCTT‑CCGCCCGCTGCTGg‑ggggggt > 2:490128/1‑248 (MQ=255) aaTTGCATATTCACCCTGTTTACCCGCATGCCGAAGGGGTTGACGAGATCATCGTGCTGGATACCCATAACGATAATCCGCCAGATAACGACAACTGGCATACCGATGTGACATTTATTGAAACGCCACCCGCAGGGGCGATTCT‑GGCAGCTAAAGAGTTA‑CCTTCGACCGGCGG‑TGATACGCTCT‑GGGCCAGCGGGTTTGCGGCCCATGAGGGGCTCT‑CTGTTTCCTT‑CCGCCAGCTGCTGg‑ggggggt > 1:123780/1‑248 (MQ=255) ttCACCCTGTTTACCCGCATGCCGAAGGGGTTGACGAGATCATCGTGCTGGATACCCATAACGATAATCCGCCAGATAACGACAACTGGCATACCGATGTGACATTTATTGAAACGCCACCCGCAGGGGCGATTCT‑GGCAGCTAAAGAGTTA‑CCTTCGACCGGCGG‑TGATACGCTCT‑GGACCAGCGGTATTGCGGCCTATGAGGCGCTCT‑CTGTTCCCTT‑CCGCCAGCTGCTGA‑GTGGGCTGCGTGCGGa < 1:636725/250‑1 (MQ=255) aCCCTGTTTACCCGCATGCCGAAGGGGTTGACGAGATCATCGTGCTGGATACCCATAACGATAATCCGCCAGATAACGACAACTGGCATACCGATGTGACATTTATTGAAACGCCACCCGCAGGGGCGATTCT‑GGCAGCTAAAGAGTTA‑CCTTCGACCGGCGG‑TGATACGCTCT‑GGACCAGCGGGATTGCGGCCTATGAGGCGCTCT‑CCGTTCCCTT‑CCCCCAGCTGCTGG‑GGGGGCTGCGGGCGGAGCa > 1:278289/1‑250 (MQ=255) ccTGTTTACCCGCATGCCGAAGGGGTTGACGAGATCATCGTGCTGGATACCCATAACGATAATCCGCCAGATAACGACAACTGGCATACCGATGTGACATTTATTGAAACGCCACCCGCAGGGGCGATTCT‑GGCAGCTAAAGAGTTA‑CCTTCGACCGGCGG‑TGATACGCTCT‑GGACCAGCGGGATTGCGGCCTATGAGGCGCCCT‑CTGTTTCCTT‑CCCCCAGCTGCTGA‑GTGGGGTGCGTGCGGGGCATg > 1:116127/1‑250 (MQ=255) cTGTTTACCCGCATGCCGAAGGGGTTGACGAGATCATCGTGCTGGATACCCATAACGATAATCCGCCAGATAACGACAACTGGCATACCGATGTGACATTTATTGAAACGCCACCCGCAGGGGCGATTCT‑GGCAGCTAAAGAGTTA‑CCTTCGACCGGCGG‑TGATACGCTCT‑GGACCAGCGGGATTGCGGCCTATGAGGCGCTCT‑CTGTTCCCTT‑CCGCCAGCTGCTGA‑GTGGGCTGCGTGCGGGGCATGa > 1:723121/1‑250 (MQ=255) aCCCGCATGCCGAAGGGGTTGACGAGATCATCGTGCTGGATACCCATAACGATAATCCGCCAGATAACGACAACTGGCATACCGATGTGACATTTATTGAAACGCCACCCGCAGGGGCGATTCT‑GGCAGCTAAAGAGTTA‑CCTTCGACCGGCGG‑TGATACGCTCT‑GGACCAGCGGTATTGCGGCCTATGAGGCGCTCT‑CTGTTCCCTT‑CCGCCAGCTGCTGA‑GTGGGCTGCGTGCGGAGCATGATTTcc < 1:668341/249‑1 (MQ=255) ccGCATGCCGAAGGGGTTGACGAGATCATCGTGCTGGATACCCATAACGATAATCCGCCAGATAACGACAACTGGCATACCGATGTGACATTTATTGAAACGCCACCCGCAGGGGCGATTCT‑GGCAGCTAAAGAGTTA‑CCTTCGACCGGCGG‑TGATACGCCCT‑GGACCAGCGGGATTGCGGCCTATGAGGCGCTCT‑CTGTTCCCTT‑CCGCCCGCTGCTGA‑GTGGGCTGCGTGCGGAGCATGATTTCCGt > 1:502022/1‑249 (MQ=255) cGCATGCCGAAGGGGTTGACGAGATCATCGTGCTGGATACCCATAACGATAATCCGCCAGATAACGACAACTGGCATACCGATGTGACATTTATTGAAACGCCACCCGCAGGGGCGATTCT‑GGCAGCTAAAGAGTTA‑CCTTCGACCGGCGG‑TGATACGCTCT‑GGACCAGCGGGATTGCGGCCTATGAGGCGCTCT‑CTGTTCCCTT‑CCGCCAGCCGCTGA‑GGGGGCTGCGGGCGGAGCATGATTTCCGTa > 1:196294/1‑249 (MQ=255) aTGCCGAAGGGGTTGACGAGATCATCGTGCTGGATACCCATAACGATAATCCGCCAGATAACGACAACTGGCATACCGATGTGACATTTATTGAAACGCCACCCGCAGGGGCGATTCT‑GGCAGCTAAAGAGTTA‑CCTTCGACCGGCGG‑TGATACGCTCT‑GGACCAGCGGTATTGCGGCCTATGAGGCGCTCT‑CTGTTCCCTT‑CCGCCAGCTGCTGA‑GTGGGCTGCGTGCGGAGCATGATTTCCGTAAATc < 2:749104/250‑1 (MQ=255) aTGCCGAAGGGGTTGACGAGATCATCGTGCTGGATACCCATAACGATAATCCGCCAGATAACGACAACTGGCATACCGATGTGACATTTATTGAAACGCCACCCGCAGGGGCGATTCT‑GGCAGCTAAAGAGTTA‑CCTTCGACCGGCGG‑TGATACGCTCT‑GGACCAGCGGTATTGCGGCCTATGAGGCGCTCT‑CTGTTCCCTT‑CCGCCAGCTGCTGA‑GTGGGCTGCGTGCGGAGCATGATTTCCGTAAATc < 1:528409/250‑1 (MQ=255) ccGAAGGGGTTGACGAGATCATCGTGCTGGATACCCATAACGATAATCCGCCAGATAACGACAACTGGCATACCGATGTGACATTTATTGAAACGCCACCCGCAGGGGCGATTCT‑GGCAGCTAAAGAGTTA‑CCTTCGACCGGCGG‑TGATACGCTCT‑GGACCAGCGGTATTGCGGCCTATGAGGCGCTCT‑CTGTTCCCTT‑CCGCCAGCTGCTGA‑GTGGGCTGCGTGCGGAGCATGATTTCCGTAAATCGtt < 2:70734/250‑1 (MQ=255) cGAAGGGGTTGACGAGATCATCGTGCTGGATACCCATAACGATAATCCGCCAGATAACGACAACTGGCATACCGATGTGACATTTATTGAAACGCCACCCGCAGGGGCGATTCT‑GGCAGCTAAAGAGTTA‑CCTTCGACCGGCGG‑TGATACGCTCT‑GGACCAGCGGGATTGCGGCCTATGAGGCGCTCT‑CTGTTCCCTT‑CCGCCCGCTGCTGG‑GTGGGCTGCGTGCGGAGCATGATTTCCGTAAATCGTT‑c > 1:172561/1‑250 (MQ=255) aaGGGGTTGACGAGATCATCGTGCTGGATACCCATAACGATAATCCGCCAGATAACGACAACTGGCATACCGATGTGACATTTATTGAAACGCCACCCGCAGGGGCGATTCT‑GGCAGCTAAAGAGTTA‑CCTTCGACCGGCGG‑TGATACGCTCT‑GGACCAGCGGTATTGCGGCCTATGAGGCGCTCT‑CTGTTCCCTT‑CCGCCAGCTGCTGA‑GTGGGCTGCGTGCGGAGCATGATTTCCGTAAATCGTT‑ccc < 1:485372/250‑1 (MQ=255) gTTGACGAGATCATCGTGCTGGATACCCATAACGATAATCCGCCAGATAACGACAACTGGCATACCGATGTGACATTTATTGAAACGCCACCCGCAGGGGCGATTCT‑GGCAGCTAAAGAGTTA‑CCTTCGACCGGCGG‑TGATACGCTCT‑GGACCAGCGGTATTGCGGCCTATGAGGCGCTCT‑CTGTTCCCTT‑CCGCCAGCTGCTGA‑GTGGGCTGCGTGCGGAGCATGATTTc > 1:529905/1‑231 (MQ=255) gTTGACGAGATCATCGTGCTGGATACCCATAACGATAATCCGCCAGATAACGACAACTGGCATACCGATGTGACATTTATTGAAACGCCACCCGCAGGGGCGATTCT‑GGCAGCTAAAGAGTTA‑CCTTCGACCGGCGG‑TGATACGCTCT‑GGACCAGCGGTATTGCGGCCTATGAGGCGCTCT‑CTGTTCCCTT‑CCGCCAGCTGCTGA‑GTGGGCTGCGTGCGGAGCATGATTTCCGTAAATCGTT‑CCCGGAAt < 2:158101/250‑1 (MQ=255) ttGACGAGATCATCGTGCTGGATACCCATAACGATAATCCGCCAGATAACGACAACTGGCATACCGATGTGACATTTATTGAAACGCCACCCGCAGGGGCGATTCT‑GGCAGCTAAAGAGTTA‑CCTTCGACCGGCGG‑TGATACGCTCT‑GGACCAGCGGTATTGCGGCCTATGAGGCGCTCT‑CTGTTCCCTT‑CCGCCAGCTGCTGA‑GTGGGCTGCGTGCGGAGCATGATTTcc < 2:529905/231‑1 (MQ=255) agagaTCAACGTGCTTGATACCCATAACGATAATCCGCCAGATAACGACAACTGGCATACCGATGTGACATTTATTGAAACGCCACCCGCAGGGGCGATTCG‑GGCAGCTAAAGAGTTA‑CCTTCGACCGGCGG‑TGATACGCTCT‑GGACCAGCGGTATCGCGGCCTAAGAGGCGCTCT‑CTGTTCCCTT‑CCGCCAGCTGCTGA‑GTGAGCTGCGTGCGGAGCATGATTTCCGTAAATCGGT‑CCCGGAATACaaa < 2:434140/249‑1 (MQ=255) agaTCATCGTGCTGGATACCCATAACGATAATCCGCCAGATAACGACAACTGGCATACCGATGTGACATTTATTGAAACGCCACCCGCAGGGGCGATTCT‑GGCAGCTAAAGAGTTA‑CCTTCGACCGGCGG‑TGATACGCTCT‑GGACCAGCGGTATTGCGGCCTATGAGGCGCTCT‑CTGTTCCCTT‑CCGCCAGCTGCTGA‑GTGGGCTGCGTGCGGAGCATGATTTCCGTAAATCGTT‑CCCGGAATACAAATa < 2:647518/250‑1 (MQ=255) gaTCATCGTGCTGGATACCCATAACGATAATCCGCCAGATAACGACAACTGGCATACCGATGTGACATTTATTGAAACGCCACCCGCAGGGGCGATTCT‑GGCAGCTAAAGAGTTA‑CCTTCGACCGGCGG‑TGAAACGGCCT‑TGGCCAGCGGGATTGGGGGCTATGAGGCGCCCT‑CTTGTCCCCT‑CCCCCCGCCGGTGA‑GGGGGGCGCCGGCGGGGCCTGATTTCCGGTAATTGTTCCCCGGAATCAAAATa > 2:588842/1‑250 (MQ=255) cGTGCTGGATACCCATAACGATAATCCGCCAGATAACGACAACTGGCATACCGATGTGACATTTATTGAAACGCCACCCGCAGGGGCGATTCT‑GGCAGCTAAAGAGTTA‑CCTTCGACCGGCGG‑TGATACGCTCT‑GGGCCAGCGGGATTTCGGCCTATTAGGCGCCCT‑CCGGTCCCTT‑CCCCCAGCTGCTGAGGGGGGCGGGGTG‑GGGGGATGATTTCCGTAAATCGGT‑CCCGGGAAAAAAATAcccgca > 2:266583/1‑245 (MQ=255) tGGATACCCATAACGATAATCCGCCAGATAACGACAACTGGCATACCGATGTGACATTTATTGAAACGCCACCCGCAGGGGCGATTCT‑GGCAGCTAAAGAGTTA‑CCTTCGACCGGCGG‑TGATACGCTCT‑GGACCAGCGGGATTTCGGCCTATTAGGGGCGCT‑CTTTTCCCTT‑CCGCCAGCTGCTGG‑GTGGGCTGCTGGGGGGGCATGGTTTTCGTTAATTGTT‑CCCGGCATACCAATACCCCAAAAcagc > 2:442910/1‑247 (MQ=255) tGGATACCCATAACGATAATCCGCCAGATAACGACAACTGGCATACCGATGTGACATTTATTGAAACGCCACCCGCAGGGGCGATTCT‑GGCAGCTAAAGAGTTA‑CCTTCGACCGGCGG‑TGATACGCTCT‑GGACCAGCGGGATTGCGGCCTATGAGGCGCTCT‑CTGTTCCCTT‑CCGCCAGCTGCTGA‑GTGGGCTGCGTGCGGAGCATGATTTCCGTAAATCGTT‑CCCGGAATACAAATACCGCCAAAcc > 1:308192/1‑248 (MQ=255) cccATAACGATAATCCGCCAGATAACGACAACTGGCATACCGATGTGACATTTATTGAAACGCCACCCGCAGGGGCGATTCT‑GGCAGCTAAAGAGTTA‑CCTTCGACCGGCGG‑TGATACGCTCT‑GGACCAGCGGTATTTCGGCCTATGAGGCGCTCT‑CTGTTTCCTT‑CCGCCCGCTGCTGA‑GTGGGCTGCGTGCGGAGCATGATTTCCGTAAATCGTT‑CCCGGAATACAAAAACCGCAAAAACGagga‑gg > 1:122611/1‑249 (MQ=255) ccATAACGATAATCCGCCAGATAACGACAACTGGCATACCGATGTGACATTTATTGAAACGCCACCCGCAGGGGCGATTCT‑GGCAGCTAAAGAGTTA‑CCTTCGACCGGCGG‑TGATACGCCCT‑GGACCAGCGGGATTGCGGCCTCTTAGGCGCCCT‑CTGTTCCCTT‑CCGCCCGCCGCTGG‑GTGGGCCGCGGGCGGGGCATGATTTCCGTACATCGTT‑CCCGGAATACAAATACCCCCAAACCGGgga‑gga > 2:144262/1‑249 (MQ=255) tAACGATAATCCGCCAGATAACGACAACTGGCATACCGATGTGACATTTATTGAAACGCCACCCGCAGGGGCGATTCT‑GGCAGCTAAAGAGTTA‑CCTTCGACCGGCGG‑TGATACGCTCT‑GGACCAGCGGTATTGCGGCCTATGAGGCGCTCT‑CTGTTCCCTT‑CCGCCAGCTGCTGA‑GTGGGCTGCGTGCGGAGCATGATTTCCGTAAATCGTT‑CCCGGAATACAAATACCGCAAAACCGAGGA‑GGAACAt < 1:559245/250‑1 (MQ=255) cGATAATCCGCCAGATAACGACAACTGGCATACCGATGTGACATTTATTGAAACGCCACCCGCAGGGGCGATTCT‑GGCAGCTAAAGAGTTA‑CCTTCGACCGGCGG‑TGATACGCTCT‑GGACCAGCGGTATTGCGGCCTATGAGGCGCTCT‑CTGTTCCCTT‑CCGCCAGCTGCTGA‑GTGGGCTGCGTGCGGAGCATGATTTCCGTAAATCGTT‑CCCGGAATACAAATACCGCAAAACCGAGGA‑GGAACATCaa < 1:533468/250‑1 (MQ=255) aTAATCCGCCAGATAACGACAACTGGCATACCGATGTGACATTTATTGAAACGCCACCCGCAGGGGCGATTCT‑GGCAGCTAAAGAGTTA‑CCTTCGACCGGCGG‑TGATACGCTCT‑GGACCAGCGGTATTGCGGCCTATGAGGCGCTCT‑CTGTTCCCTT‑CCGCCAGCTGCTGA‑GTGGGCTGCGTGCGGAGCATGATTTCCGTAAATCGTT‑CCCGGAATACAAATACCGCAAAACCGAGGA‑GGAACATCAACg < 1:208674/250‑1 (MQ=255) aTCCGCCAGATAACGACAACTGGCATACCGATGTGACATTTATTGAAACGCCACCCGCAGGGGCGATTCT‑GGCAGCTAAAGAGTTA‑CCTTCGACCGGCGG‑AGATACGCTCT‑GGAACAGCGGTATTTCGGCCTTTGGGGGGCCCT‑CTGTTCCCCT‑CCGCCAGCTGGTGG‑GGGGGGGGCGGGGGGGGCATGGTTTTCGTTAATCGTT‑TCCGGGATTACAATATCGGAAAACCGAGGG‑GGAAccataaaacat > 2:292691/1‑240 (MQ=255) tCCGCCAGATAACGACAACTGGCATACCGATGTGACATTTATTGAAACGCCACCCGCAGGGGCGATTCT‑GGCAGCTAAAGAGTTA‑CCTTCGACCGGCGG‑TGATACGCTCT‑AGACCAGCGGGATTGCGGCCTATGCGGGGCCCT‑CTGGTCCCCT‑CCCACAGCCGCTGC‑GGGGGGCGCGGGCGGGGCCTGATTTCCGTAACACGGT‑CCCCGGATACAAAAACCGCCAAAACGAGGA‑GGAACAAAAACGcccg > 2:683182/1‑247 (MQ=255) gCCAGATAACGACAACTGGCATACCGATGTGACATTTATTGAAACGCCACCCGCAGGGGCGATTCT‑GGCAGCTAAAGAGTTA‑CCTTCGACCGGCGG‑TGATACGCTCT‑GGACCAGCGGGATTGCGGCCTATGAGGCGCCCT‑CTGTTCCCCT‑CCCCCAGCTGCTGG‑GGGGGCTGCGGGCGGGGCCTGATTTCCGTAAATCGTT‑CCCGGGAAACAAAAACCGCCAAAACCAGGA‑GGGACAACAAACCTGgggc > 2:558530/1‑250 (MQ=255) gATAACGACAACTGGCATACCGATGTGACATTTATTGAAACGCCACCCGCAGGGGCGATTCT‑GGCAGCTAAAGAGTTA‑CCTTCGACCGGCGG‑TGGTACGCTCT‑GGACCAGCGGGATTTCGGCCTATTAGGGGCTCT‑CTTTTTCCTT‑CCGCCCGCTGCTGT‑GTGGGCTGCGGGGGGGGGATGATTTCCGTAAATCGTT‑CCCGGAATACAAATACCGCCAAAACGAGGA‑GGGAAAACAAACCTGGCGCGAgg > 2:186199/1‑250 (MQ=255) tAACGACAACTGGCATACCGATGTGACATTTATTGAAACGCCACCCGCAGGGGCGATTCT‑GGCAGCTAAAGAGTTA‑CCTTCGACCGGCGG‑TGATACGCTCT‑GGACCAGCGGGATTTCGGCCTATGAGGCGCTCT‑CTGTTCCCTT‑CCGCCAGCTGCTGA‑GTGGGCTGCGGGCGGGGCATGATTTCCGTAAATCGTT‑CCCGGAATACAAATACCGCAAAAACGAGGA‑GGAACATCAACGCTGGCGCGAGGCg > 1:201711/1‑250 (MQ=255) tAACGACAACTGGCATACCGATGTGACATTTATTGAAACGCCACCCGCAGGGGCGATTCT‑GGCAGCTAAAGAGTTA‑CCTTCGACCGGCGG‑TGATACGCCCT‑GGACCAGCGGTATTGCGGCCTATGAGGGGCTCT‑CTGTTTCCTT‑CCGCCAGCTGCTGA‑GGGGGCTGCGTGCGGAGGATGATTTCCGTAAATCGTT‑CCCGGAATACAAATACCGCAAAACCGAGGA‑GGCACATCAACGCTGGCGCGAGGCg > 2:762158/1‑250 (MQ=255) aaCGACAACTGGCATACCGATGTGACATTTATTGAAACGCCACCCGCAGGGGCGATTCT‑GGCAGCTAAAGAGTTA‑CCTTCGACCGGCGG‑TGATATGAGCC‑GGACCAGCGGGATTGCGGCCTATGAAGCGCGCG‑CTTTTACCTT‑CCGCCAGCGGCGGA‑GGTGGGTGGGGGGGGGGCGCTATTTTCGGAAATCATT‑ACCCGGCTACCAAAACCGGCAAACCGGGGACGGAACA‑CAAACCTGGCGGGAgggag > 2:486692/1‑247 (MQ=255) cAACTGGCATACCGATGTGACATTTATTGAAACGCCACCCGCAGGGGCGATTCT‑GGCAGCTAAAGAGTTA‑CCTTCGACCGGCGG‑TGATACGCTCT‑GGACCAGCGGTATTGCGGCCTATGAGGCGCTCT‑CTGTTCCCTT‑CCGCCAGCTGCTGA‑GTGGGCTGCGTGCGGAGCATGATTTCCGTAAATCGTT‑TCCGGAATACAAATACCGCAAAACCCAGGA‑GGAACATCAACGCTGGCGCGAGGCGGTcgc > 1:437396/1‑249 (MQ=255) aaCTGGCATACCGATGTGACATTTATTGAAACGCCACCCGCAGGGGCGATTCT‑GGCAGCTAAAGAGTTA‑CCTTCGACCGGCGG‑TGATACGCTCT‑GGTTCAGCGGTTTTGCGGCCTTTGAGGCGCTCTCCTGTT‑CCTT‑TCTCCCGCTGCTGC‑GTTGGCTTCGTGCGGGGGCTGGTTTTCGTAAAACGCT‑CCCTGCATTCAACTTCCGCAAAACCGTGGC‑GGGCAAGTAACTCTGGcgcggagggggcgcg > 2:147069/1‑238 (MQ=255) aaCTGGCATACCGATGTGACATTTATTGAAACGCCACCCGCAGGGGCGATTCT‑GGCAGCTAAAGAGTTA‑CCTTCGACCGGCGG‑TGATACGCTCT‑GGACCCGCGGGATTGCGGCCCATGGGGGGCCCT‑CTGTTTCCTT‑CCGCCCGCTGCTGA‑GTGGGCTGCGTGCGGGGGCTGATTTTCGTAAATCGTT‑TCCGGAATACAAATACCCCCAAAACCAGGG‑GGAACATCCACCCTGGCGCGAgggcgtccgc > 2:808064/1‑241 (MQ=255) gAAACGCCACCCGCAGGGGCGATTCT‑GGCAGCTAAAGAGTTA‑CCTTCGACCGGCGG‑TGATACGCTCT‑GGGCCAGCGGGATTGCGGCCTATGAGGGGCTCT‑CTGTTCCCTT‑CCGCCAGCTGCTGA‑GTGGGGTGCGGGGGGAGCATGATTTTCGTAAATCGTT‑CCCGGAATAAAAATACCGCAAAAACCAGGA‑GGAAAAACAACGGTGGGCGGAGGGCGGCGCGGAAAAACCCG‑CGTTGGCACATACcgtgg > 2:211146/1‑250 (MQ=255) aaaCGCCACCCGCAGGGGCGATTCT‑GGCAGCTAAAGAGTTA‑CCTTCGACCGGCGG‑TGATACGCCCT‑GGACCAGCGGGATTGCGGCCTATTAGGCGCTCT‑CTGTTCCCCT‑CCCCCCGCTGCTGG‑GTGGGGTGCGTGCGGGGCATGATTTTCGTAAATCGTT‑CCCCGGATAACAATACCGCAAAACCGGGGG‑GGAACATCCACGCTGGCGCGCGGCCGGCGC‑GAAAAACCCCCCGCTGCTACATCCggtggt > 2:198982/1‑250 (MQ=255) cgcgGGGGCGATTCT‑GCCATCAAAAGAGTTC‑CTTTCGCCCGGCGG‑TGATCCGCTTG‑GGCCCGGCGGTATTGCGCCCTATGAGGCGCTCT‑CTGTTCCCTC‑CCGCCGGCTGCTGA‑GTGGGCTGCGTGCGGAGAATGATTTCCGTAAATCGTC‑CCCGGATTACAAATACCGAAAACCCGAGGA‑GGAACATCACCGCTGGCGCGGGGCGTTCGC‑GAAAAACCCGCCGTTGCTACATCCGGTGGTGCGAACGCAt < 2:510597/250‑1 (MQ=255) gggggCGGTTTTGGGCAGCTAAAG‑GTTACCCTCCGCCCGGGGG‑TGAGCCGCTCT‑GGCCCAGGGGTGTTGCGGCTTATGGGGCGCTCT‑CTTTCCCCTC‑CCGCCGGCTGCTGA‑GTGGGCTGCGGGCGGAGCATGATTCCCGAAAACCGTC‑CCCGGAATACAAATCCCGAAAAACCGGGGA‑GAAACATCACCGGGGGCGCGGGGCGGCCGC‑AAAAAACCCGCCGTTGCTACATCCGGTGGTGCGAACGCATcc < 2:116269/249‑1 (MQ=255) gggCGATTCT‑GGCAGCTAAAGAGTTA‑CCTTCGACCGGCGG‑TGATACGCTCT‑GGACCAGCGGGATTGCGGCCTATGAGGCGCTCT‑CTGTTCCCTT‑CCGCCAGCTGCTGA‑GTGGGCTGCGTGCGGAGCATGATTTCCGTAAATCGTT‑CCCGGAATACAAATACCGCAAAACCGAGGA‑GGAACATCAACGCTGGCGCGAGGCGGTCGC‑GGAAAACCCGCCGTTGCTACATCCGGTGGTGCGAACGCATCCggg > 1:130039/1‑249 (MQ=255) tcgggCTGCTAAAGGTTTC‑CCTCCGCCCGGGGG‑TGTTCCGCTCG‑GGCCCGGCGTTTTTGGGGCCTATGAGGCGCTCT‑CT‑TTCCCTTCCCGCCAGCTGCTGA‑GTGGGCTGCGGGCGGAGCATGATTCCCGAAAATCTTC‑CCGGGAATAAAAATCCCGAAAACCCGAGGA‑GGAACATCACCGCTGGCGCGGGGCGGTCGC‑GAAAACCCCGCCGTTGCTACATCCGGTGGTGCGAACGCATCCGGTGAGCgg < 2:148481/246‑1 (MQ=255) tcgggCATCTAAAGAGTTC‑CCTTCGCCCGGGGG‑TGATCCG‑TCTGGGCCCGGGGGTTTTGCGCCCTAGGAGGCGCTTT‑CTTTTCCCTC‑CCGCCAGCTGGTGG‑GTGGGCTGCGGGCGGAGCATGATTCCCGAAAATCTTT‑CCCGGAATACAAATCCCGAAAACCCGAGGA‑GGAACATCAACGCTGGCGCGGGGCGGTCGC‑GAAAACCCCGCCGTTGCTACATCCGGTGGTGCGAACGCATCCGGTGAGCgg < 2:824439/246‑1 (MQ=255) gCTAAAGATTTC‑CCTCCGCCCGGGGG‑TGTACCGCGCG‑GGCCCGGGGGTTTTGGGCCCTGGGAGGCGCTGT‑CTGTTCCCTC‑CGGCCAGCTGCTGG‑GGGGGTGGCGTGGGGGGAATGATTCCCGAAAATCGTC‑CCGGGAAGACAAATCCCGAAAGACGGGGGA‑GAAACACCAGCGCGGGCGGGGGGGGGTCGG‑GAAAAACCCGCCGTTGCTACATCCGGTGGTGCGAACGCATCCGGTGAGCGGTAAACAgg < 2:317137/250‑1 (MQ=255) ccTTCGCCCGGCGG‑TGATACGCTCT‑GGACCAGCGGTATTGCGGCCTATGAGGCGCTCT‑CTGTCCCCTT‑CCGCCAGCTGCTGA‑GTGGGCTGCGTGCGGAGCATGATTTCCGTAAATCGTC‑CCCGGAATACAAATCCCGAAAACCCGAGGA‑GGAACATCAACGCTGGCGCGAGGCGGTCGC‑AAAAAACCCGCCGTTGCTACATCCGGTGGTGCGAACACATCCGGTGAGCGGTAAACAGGCGCTGTTTGtga < 1:383266/250‑1 (MQ=255) cGACCGGCGG‑TGATACGCTCT‑GGACCTGCGGTATTGCGGCCTATGAGGCGCTCT‑CTGTCCCCTC‑CCGCCAGCTGCTGA‑GTGGGCTGCGTGCGGAGCATGATTCCCGTAAATCGTT‑CCCGAAATACAAATACCGCAAAACCGAGGA‑GAAACATCAACGCGGGCGCGAGGCGGTCGC‑GAAAAACCCGCCGTTGCTACATCCGGTGGTGCGAACGCATCCGGTGAGCGGTAAACAGGCGCTGTTTGtgaat < 2:33516/248‑1 (MQ=255) gACCGGCGG‑TGATCCGCTGG‑GGACCAGCGGTATGGCGGCGTAGGAGGCGCGCT‑CTGTCCCCTC‑CCGCCAGCTGCGGG‑GTGGGCTGGGTGCGGAGCAGGATTCCCGAAAATCGTT‑CCCGGAATACAAACACCGAAAACCCGAGGA‑GGAACACCAGCGCGGGCGGGAGGCGGTCGC‑GAAAACCCCGCCGTTGCTACATCCGGTGGTGCGAACGCATCCGGTGAGCGGTAAACAGGCGCTGTTTGtgaatgaa < 2:522077/250‑1 (MQ=255) cgacggcggtTGATACGCTCT‑GGACCGGCGTTATTGCGGCATAGGGGGCGCTCT‑CTGTCCCCTT‑CCGCCAGCTGCTGA‑GTGGGCGGCGTGCGGAGCATGATTTCCGTAAACCGTC‑CCGGAAATACAAATCCCGCAAAACCGAGGA‑GGAACATCAACGCGGGCGCGGGGCGGTCGC‑GAAAACCCCGCCGTTGCTACATCCGGTGGTGCGAACGCATCCGGTGAGCGGTAAACAGGCGCTGTTTGtgaatg < 2:619706/246‑1 (MQ=255) ccGGCGG‑TGATACGCTCT‑GGACCAGCGGTATTGCGGCCTATGAGGCGCTCT‑CTGTTCCCTT‑CCGCCAGCTGCTGA‑GTGGGCTGCGTGCGGAGCATGATTTCCGTAAATCGTT‑CCCGGAATACAAATACCGCAAAACCGAGGA‑GGAACATCAACGCTGGCGCGAGGCGGTCGC‑GAAAAACCCGCCGTTGCTACATCCGGTGGTGCGAACGCATCCGGTGAGCGGTAAACAGGCGCTGTTTGTGAATGAAgg > 1:433987/1‑250 (MQ=255) gcgg‑TGATACGCTCT‑GGACCAGCGGTATTGCGGCCTAGGAGGCGCTCT‑CTGTTCCCTT‑CCGCCAGCTGCTGA‑GGGGGCTGCGTGCGGAGCATGATTCCCGTAAATCGTT‑CCCGGAATAAAAATACCGCAAAACCGAGGA‑GGAACATCAACGCTGGCGCGAGGCGGTCGC‑GAAAAACCCGCCGTTGCTACATCCGGTGGTGCGAACGCATCCGGTGAGCGGTAAACAGGCGCTGTTTGTGAATGAAGGCtt < 1:634798/250‑1 (MQ=255) ct‑GGACCAGCGGTATTGCGGCCTATGAGGCGCTCT‑CTGTTCCCTT‑CCGCCAGCTGCTGA‑GTGGGCTGCGTGCGGAGCATGATTTCCGTAAATCGTT‑CCCGGAATACAAATACCGCAAAACCGAGGA‑GGAACATCAACGCTGGCGCGAGGCGGTCGC‑GAAAAACCCGCCGTTGCTACATCCGGTGGTGCGAACGCATCCGGTGAGCGGTAAACAGGCGCTGTTTGTGAATGAAGGCTTTACTACGCGAAtt > 1:598562/1‑250 (MQ=255) gACCAGCGGTATTGCGGCCTATGAGGCGCTCT‑CTGTTCCCTT‑CCGCCAGCTGCTGA‑GTGGGCTGCGTGCGGAGCATGATTTCCGTAAATCGTT‑CCCGGAATACAAATACCGCAAAACCGAGGA‑GGAACATCAACGCTGGCGCGAGGCGGTCGC‑GAAAAACCCGCCGTTGCTACATCCGGTGGTGCGAACGCATCCGGTGAGCGGTAAACAGGCGCTGTTTGTGAATGAAGGCTTTACTACGCGAAttgtt > 1:676158/1‑250 (MQ=255) aGCGGTATTGCGGCCTATGAGGCGCTCT‑CTGTTCCCTT‑CCGCCGGCTGCTGA‑GTGGGCTGCGTGCGGAGCATGATTCCCGTAAATCGTT‑CCCGGAATACAAATACCGAAAAACCGAGGA‑GGAACATCAACGCTGGCGCGGGGCGGTCGC‑GAAAAACCCGCCGTTGCTACATCCGGTGGTGCGAACGCATCCGGTGAGCGGTAAACAGGCGCTGTTTGTGAATGAAGGCTTTACTACGCGAATTGTTGAtg < 1:326697/250‑1 (MQ=255) | AAGCTATTACGCCGCAGCAGCAACGCGCGCTGGCCCAGCGTTTTGGCGAATTGCATATTCACCCTGTTTACCCGCATGCCGAAGGGGTTGACGAGATCATCGTGCTGGATACCCATAACGATAATCCGCCAGATAACGACAACTGGCATACCGATGTGACATTTATTGAAACGCCACCCGCAGGGGCGATTCT‑GGCAGCTAAAGAGTTA‑CCTTCGACCGGCGG‑TGATACGCTCT‑GGACCAGCGGTATTGCGGCCTATGAGGCGCTCT‑CTGTTCCCTT‑CCGCCAGCTGCTGA‑GTGGGCTGCGTGCGGAGCATGATTTCCGTAAATCGTT‑CCCGGAATACAAATACCGCAAAACCGAGGA‑GGAACATCAACGCTGGCGCGAGGCGGTCGC‑GAAAAACCCGCCGTTGCTACATCCGGTGGTGCGAACGCATCCGGTGAGCGGTAAACAGGCGCTGTTTGTGAATGAAGGCTTTACTACGCGAATTGTTGATG > NZ_CP009273/383399‑383887 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 26 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |