Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NZ_CP0092734,245,9970GC33.3% 128.2 / 20.2 63P133R (CCG→CGG) plsBglycerol‑3‑phosphate 1‑O‑acyltransferase PlsB
Reads supporting (aligned to +/- strand):  ref base G (11/31);  new base C (21/0);  total (32/31)
Fisher's exact test for biased strand distribution p-value = 6.28e-09
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00
Rejected as consensus: Frequency below/above cutoff threshold.

AGATCCTGACGAGCAGGCAAACGTGGGCCTACGGCAGCCAGACGTTGACGGGCAAAGTGCATACGCGCCACGCGCGCCAGTTTCTGAGCGATAGTTTTATCCGTGCCGTGTTCATCCGCCATACGGCGCAGCGAAACTGACGGCGAGAAACGCACAAAACTGTCGCGACCGAGCCACAGTACAGCGAAAAATTTCTGTACGCCGTTAAGCATACGCAGCGGCGGGTTCACTTCGCCTTTTTCACGCCCCGGCGCGCGACCAAACATCACCGACACTGGCACCATCTGCACATCCAGATTTGGGTTGCTACGGTGCAAATCGAGATAGTCGTGGAACAGCTTAATAGACTCTTCTTTCGGCGTGTAATAGGTGAACACACGCGGCCCGCCGTGAATGAACACATAGCGCGGCAGTAGCGTGCCGTCGATTTCCAGCGGCTCTAACGGGTCAGGCAAGTCATGTGCCAGACACTGGGCGCGCAACGTCAGCAAATCTGCT  >  NZ_CP009273/4245748‑4246245
                                                                                                                                                                                                                                                            |                                                                                                                                                                                                                                                          
aGATCCTGACGAGCAGGCAAACGTGGGCCTACGGCAGCCAGACGTTGACGGGCAAAGTGCATACGCGCCACGCGCGCCAGTTTCTGAGCGATAGTTTTATCCGTGCCGTGTTCATCCGCCATACGGCGCAGCGAAACTGACGGCGAGAAACGCACAAAACTGTCGCGACCGAGCCACAGTACAGCGAAAAATTTCTGTACGCCGTTAAGCATACGCAGCGGCGGGTTCACTTCGCCTTTTTCACGCCCCg                                                                                                                                                                                                                                                            <  1:48939/250‑1 (MQ=255)
   ccttGACGAGCAGGAAACCGGGGGCCCACGGCGGCCAGACGTTGAGGGGCAAAGTGCATCCGCGCAGGGCGCCCCATTTTCTGGGCGAAAGTTTAATCCTTGCCGTGTTCATCCACCATGCGGCGCAGCGAAGCTGACGGCGAGAAACGCACAAAACTGTCGCGACCGAGCCACAGTACAGCGAAAAATTTCTGTGCGCCGTTAAGCATACGCAGCGGCGGGTTCACTTCGCCTTTTTCACGCCCCGgcg                                                                                                                                                                                                                                                         <  2:563478/247‑1 (MQ=255)
   cccTGCCGAGCAGGCAAGCGGGGGCCTAGGGCAGCCAGACGTGAACGGGCAAAGTGCATACGCGCCGCGCGCGCCAGTTTCTGAGCGATAGTTTTATCCGTGCCGTGTTCATCCGCCATACGGCGCAGCGAAACTGACGGCGAGAAACGCACAAAACTGTCGCGACCGAGCCACAGTACAGCGAAAAATTTCTGTGCGCCGTTAAGCATACGCAGCGGCGGGTTCACTTCGCCTTTTTCACGCCCCGgcg                                                                                                                                                                                                                                                         <  2:71786/249‑1 (MQ=255)
    ccTGACGAGCAGGCAAACGGGGGCCTACGGCAGCCAGACGTTGACGGGCAAAGTGCATACGCGCCACGCGCGCCAGTTTCTGAGCGATAGTTTTATCCGTGCCGTGTTCATCCGCCATACGGCGCAGCGAAACTGACGGCGAGAAACGCACAAAACTGTCGCGACCGAGCCACAGTACAGCGAAAAATTTCTGTACGCCGTTAAGCATACGCAGCGGCGGGTTCACTTCGCCTTTTTCACGCCCCGgcgc                                                                                                                                                                                                                                                        <  2:782291/250‑1 (MQ=255)
             cAGGCAAACGTGGGCCTACGGCAGCCAGACGTTGACGGGCAAAGTGCATACGCGCCACGCGCGCCAGTTTCTGAGCGATAGTTTTATCCGTGCCGTGTTCATCCGCCATACGGCGCAGCGAAACTGACGGCGAGAAACGCACAAAACTGTCGCGACCGAGCCACAGTACAGCGAAAAATTTCTGTACGCCGTTAAGCATACGCCGCGGCGGGGGTAACTCCCCTTTTTTACGCCCCCgccccgcgccca                                                                                                                                                                                                                                                >  2:225024/1‑239 (MQ=255)
                   aaCGTGGGCCTACGGCAGCCAGACGTTGACGGGCAAAGTGCATACGCGCCACGCGCGCCAGTTTCTGAGCGATAGTTTTATCCGTGCCGTGTTCATCCGCCATACGGCGCAGCGAAACTGACGGCGAGAAACGCACAAAACTGTCGCGACCGAGCCACAGTACAGCGAAAAATTTCTGTACGCCGTTAAGCATACGCAGCGGCGGGGTCAATTCGCCCTTTTTTCGCCCCCGCGCGCGCCCcaaaaaccc                                                                                                                                                                                                                                         >  2:936084/1‑244 (MQ=255)
                          gCCTACGGCAGCCAGACGTTGACGGGCAAAGTGCATACGCGCCACGCGCGCCAGTTTCTGAGCGATAGTTTTATCCGTGCCGTGTTCATCCGCCATACGGCGCAGCGAAACTGACGGCGAGAAACGCACAAAACTGTCGCGACCGAGCCACAGTACAGCGAAAAATTTCTGTACGCCGTTAAGCATACGCAGCGGCGGGTTCACTTCGCCTTTTTTAAGCCCCCGCGCGCGACCAAAAATCACCGacacc                                                                                                                                                                                                                                 >  1:959562/1‑249 (MQ=255)
                          gCCTACAGCAGCCAGACGTTGACGGGCAAAGTGCATACGCGCCACGCGCGCCAGTTTCTGAGCGATAGTTTTATCCGTGCCGTGTTCATCCGCCATACGGCGCAGCGAAACTGACGGCGAGAAACGCACAAAACTGTCGCGACCGAGCCACAGTACAGCGAAAAATTTCTGTACGCCGTTAAGCATACGCAGCGGCGGGTTCACTTCGCCTTTTTCACGCCCCGGCGCGCGACCAAACATCACCGACACt                                                                                                                                                                                                                                 <  1:452442/250‑1 (MQ=255)
                                  cAGCCAGACGTTGACGGGCAAAGTGCATACGCGCCACGCGCGCCAGTTTCTGAGCGATAGTTTTATCCGTGCCGTGTTCATCCGCCATACGGCGCAGCGAAACTGACGGCGAGAAACGCACAAAACTGTCGCGACCGAGCCACAGTACAGCGAAAAATTTCTGTACGCCGTTAAGCATACGCAGCGGCGGGTTCACTTCGCCTTTTTCACGCCCCGGCGCGCGACCAAACATCACCGACACTGGCACCAt                                                                                                                                                                                                                         <  1:415115/250‑1 (MQ=255)
                                      cAGACGTTGACGGGCAAAGTGCATACGCGCCACGCGCGCCAGTTTCTGAGCGATAGTTTTATCCGTGCCGTGTTCATCCGCCATACGGCGCAGCGAAACTGACGGCGAGAAACGCACAAAACTGTCGCGACCGAGCCACAGTACAGCGAAAAATTTCTGTACGCCGTTAAGCATACGCAGCGGCGGGGTGACATCTCCTTTTTTCTCCCCCCCCGGCCGACCCCACATCACCCACCCCGGCCCCaccctc                                                                                                                                                                                                                     >  2:54351/1‑245 (MQ=255)
                                           gTTGACGGGCAAAGTGCATACGCGCCACGCGCGCCAGTTTCTGAGCGATAGTTTTATCCGTGCCGTGTTCATCCACCATACGGCGCAGCGAAACTGACGGCGAGAAACGCACAAAACTGTCGCGACCGAGCCACAGTACAGCGAAAAATTTCTGTACGCCGTTAAGCATACGCAGCGGCGGGTTAACTTCGCCTTTTTCACGCCCCCGCGCGCGACCCAACATCACCCACACACGCACCACCCGCACAta                                                                                                                                                                                                               >  1:261706/1‑249 (MQ=255)
                                            ttGACGGGCAAAGTGCATACGCGCCACGCGCGCCAGTTTCTGAGCGATAGTTTTACCCGTGCCGTGTTCATCCGCCATACGGCGCAGCGAAACTGACGGCGAGAAACGCACAAAACTGTCGCGACCGAGCCACAGTACAGCGAAAAATTTCTGTACGCCGTTAAGCATACGCAGCGGCGGGTTCACTTCGCCTTTTTCACGCCCCGGCGCGCGACCAAACATCACCGACACTGGCACCATCTGCACATcc                                                                                                                                                                                                              <  1:81146/250‑1 (MQ=255)
                                                 gggCAAAGTGCATACGCGCCACGCGCGCCAGTTTCTGAGCGATAGTTTTATCCGTGCCGTGTTCATCCGCCATACGGCGCAGCGAAACTGACGGCGAGAAACGCACAAAACTGTCGCGACCGAGCCACAGTACAGCGAAAAATTTCTGTACGCCGTTAAGCATACGCAGCGGCGGGGTTACTTCGCCTTTTTTACGCCCCCGCGCGCGACCAAACATCACCCACACTGGCACCATCTGCACATCCAGAtt                                                                                                                                                                                                         >  1:306508/1‑250 (MQ=255)
                                                    cAAAGTGCATACGCCCCACGCGCGCCAGTTTCTGAGCGATAGTTTTATCCGTGCCGTGTTCATCCGCCATACGGCGCAGCGAAACTGACGGCGAGAAACGCACAAAACTGTCGCGACCGAGCCACAGTACAGCGAAAAATTTCTGTACGCCGTTAAGCATACGCAGCGGCGGGTTCACTTCGCCTTTTTCACGCCCCGGCGCGCGACCAAACATCACCGACACTGGCACCATCTGCACATCCAGATTTgg                                                                                                                                                                                                      <  1:861760/250‑1 (MQ=255)
                                                     aaaGTGCATACGCGCCACGCGCGCCAGTTTCTGAGCGATAGTTTTATCCGTGCCGTGTTCATCCGCCATACGGCGCAGCGAAACTGACGGCGAGAAACGCACAAAACTGTCGCGACCGAGCCACAGTACAGCGAAAAATTTCTGTACGCCGTTAAGCATACGCAGCGGCGGGGTCACTTCGCCTTTTTTCCGCCCCCGCGCGCGGCCCAACATCACCGACACTTGCACCATCTGCACATCCAGAATTtgg                                                                                                                                                                                                     >  1:575640/1‑250 (MQ=255)
                                                       aGTGCATACGCGCCACGCGCGCCAGTTTCTGAGCGATAGTTTTATCCGTGCCGTGTTCATCCGCCATACGGCGCAGCGAAACTGACGGCGAGAAACGCACAAAACTGTCGCGACCGAGCCACAGTACAGCGAAAAATTTCTGTACGCCGTTAAGCATACGCAGCGGCGGGTTCACTTCGCCTTTTTCACGCCCCGGCGCGCGACCAAACATCACCGACACTGGCACCATCTGCACATCCAGATTTGGGtt                                                                                                                                                                                                   <  1:282011/250‑1 (MQ=255)
                                                         tGCACACGCCCCACCCGCCCCATTTTCGGAGCTATTGTTTTATCCGGGCCGTGTTCTCCCGCCATACGGCGCAGCGAAACTGACGGCGAGAAACGCAAAAACCTGTCGCGACCGAGCCACAGTACAGCGAAAAATTTCTGTACGCCGTTAAGCATACGCAGCGGCGGGTTCACTTCGCCTTTTTCACGCCCCGGCGCGCGACCAAACATCACCGACACTGGCACCATCTGCACATCCAGATTTGGGTTGc                                                                                                                                                                                                 <  2:438168/250‑1 (MQ=255)
                                                           cATACGCGCCACGCGCGCCAGTTTCTGAGCGATAGTTTTATCCGTGCCGTGTTCATCCGCCATACGGCGCAGCGAAACTGACGGCGAGAAACGCACAAAACTGTCGCGACCGAGCCACAGTACAGCGAAAAATTTCTGTACGCCGTTAAGCATACGCAGCGGCGGGTTCACTTCGCCTTTTTTACGCCCCGGCGCGCGGCCCAACATCCCCGACACCGGCACCCTCTGCACATCCAGAATTTGGTTGCTa                                                                                                                                                                                               >  1:808725/1‑250 (MQ=255)
                                                                 cgcCACGCGCGCCAGTTTCTGAGCGATAGTTTTATCCGTGCCGTGTTCATCCGCCATACGGCGCAGCGAAACTGACGGCGAGAAACGCACAAAACTGTCGCGACCGAGCCACAGTACAGCGAAAAATTTCTGTACGCCGTTAAGCATACGCAGCGGCGGGTGCCCATTGCCTTTTTCCAGCCCCCGCCCCCGACCCACAATCAACCACCACGGCCACCCTCTGACCAACCGGATTGGGGTGCTAccggg                                                                                                                                                                                          >  2:66766/1‑245 (MQ=255)
                                                                      cccgcgcCAGTTTCGGCGCGATAATTTTACCCGCGCCGTGTCCACCCGCCATACGGCGCAGCGAAACTGACGGCGAGAAACGCACAAAACTGTCGCGACCGAGCCACAGTACAGCGAAAAATTTCTGTACGCCGTTAAGCATACGCAGCGGCGGGTTCACTTCGCCTTTTTCACGCCCCGGCGCGCGACCAAACATCACCGACACTGGCACCATCTGCACATCCAGATTTGGGTTGCTACGGTGCAAATc                                                                                                                                                                                    <  2:448704/248‑1 (MQ=255)
                                                                       gcgcgcCAGTTTCTGAGCGATAGTTTTATCCGTGCCGTGTTCATCCGCCATACGGCGCAGCGAAACTGACGGCGAGAAACGCACAAAACTGTCGCGACCGAGCCGCAGTACAGCGAAAAATTTCTGTACGCCGTTAAGCATACGCAGCGGCGGGGTCACCTCGCCCTTTTCACGCCCCCGCGCGCGGCCAAACAACACCCCCCCCGGGCCCATCCTCACCACCAAGATTTGGGTTGCTCGGGTGCaaacg                                                                                                                                                                                    >  2:300384/1‑248 (MQ=255)
                                                                         tcgcCAGTTTCTGAGCGATAGTTTTATCCGTGCCGTGTTCATCCGCCATACGGCGCAGCGAAACTGACGGCGAGAAACGCACAAAACTGTCGCGACCGAGCCACAGTACAGCGAAAAATTTCTGTACGCCGTTAAGCATACGCAGCGGCGGCTTCTCTTCTCCTTTTTTTCCCCCCGCCGCGCGCCCACACAACCCCCACACCGGGCCCACCCGCCCCTCCCCCATTGGGTTGCTACGCTGCCAACCgag                                                                                                                                                                                 >  2:601199/2‑250 (MQ=255)
                                                                           gcCAGTTTCTGAGCGATAGTTTTATCCGTGCCGTGTTCATCCGCCATACGGCGCAGCGAAACTGACGGCGAGAAACGCACAAAACTGTCGCGACCGAGCCACAGTACAGCGAAAAATTTCTGTACGCCGTTAAGCATACGCAGCGGCGGGTTCAATTCGCCCTTTTTACGCCCCCGCGCCCGACCCAACATCCCCCACACCGGCCCCCTCCTCCCATCCCGCATTGGGTTGCTCCGGTGCAAATCgagg                                                                                                                                                                                >  2:291461/1‑248 (MQ=255)
                                                                              aGTTTCTGAGCGATAGTTTTATCCGTGCCGTGTTCATCCGCCATACGGCGCAGCGAAACTGACGGCGAGAAACGCACAAAACTGTCGCGACCGAGCCACAGTACAGCGAAAAATTTCTGTACGCCGTTAAGCATACGCAGCGGCGGGGTCACTTTGCCTTTTTTACGCCCTCGCGCGCGACCAAAAACCCCCGACACAGGGCCCATCTTCTCACCCCAATTTTGGTTGCTTCCGTGCACATAGAGATAGt                                                                                                                                                                            >  2:696866/1‑250 (MQ=255)
                                                                                tttCTGAGCGATAGTTTTATCCGTGCCGTGTTCATCCGCCATACGGCGCAGCGAAACTGACGGCGAGAAACGCACAAAACTGTCGCGACCGAGCCACAGTACAGCGAAAAATTTCTGTACGCCGTTAAGCATACGCAGCGGCGGGTTCACTTCTCCTTTTTTACGCCCCCGCGCGCGACCAAACACCACCGACACCGGCCCCCTCTTCCCATCCCGATTTTGGTTGCTACGGTGCAAATCGAGGTAGTCg                                                                                                                                                                          >  1:165930/1‑250 (MQ=255)
                                                                                       gCGATATTTTTATCCGTGCCGTGTTCATCCGCCATACGGCGCAGCGAAACTGACGGCGAGAACCGCACAAAACTGTCGCGACCGAGCCACAGTACAGCGAAAAATTTCTGTACGCCGTTAAGCATACGCAGCGGCGGGTTCACTTCGCCTTTTTCACGCCCCGGCGCGCGACCAAACATCACCGACACTGGCACCATCTGCACATCCAGATTTGGGTTGCTACGGTGCAAATCGAGATAGTCGTGGAACa                                                                                                                                                                   <  1:519418/250‑1 (MQ=255)
                                                                                          aTAGTTTTACCCGTCCCTGGTTCACCCGCCATACGGCGCAGCGAAACTGACGGCGAAAAACGCACAAAACTGTCGCGCCCGAGCCACAGTACAGCGAAAAATTTCTGTACGCCGTTAAGCATACGCAGCGGCGGGTTCACTTCGCCTTTTTCACGCCCCGGCGCGCGACCAAACATCACCGACACTGGCACCATCTGCACATCCAGATTTGGGTTGCTACGGTGCAAATCGAGATAGTCGTGGAACAGCt                                                                                                                                                                <  2:398299/250‑1 (MQ=255)
                                                                                           tAGTTTTATCCGTGCCGTGTTCATCCGCCATACGGCGCAGCGAAACTGACGGCGAGAAACGCACAAAACTGTCGCGACCGAGCCACAGTACAGCGAAAAATTTCTGTACGCCGTTAAGCATACGCAGCGGCGGGTTCACTTCGCCTTTTTCACGCCCCGGCGCGCGACCAAACATCACCGACACTGGCACCATCTGCACATCCAGATTTGGGTTGCTACGGTGCAAATCGAGATAGTCGTGGAACAGCtt                                                                                                                                                               <  1:494260/250‑1 (MQ=255)
                                                                                             gTTTTACCCGGCCCGTGTTCACCCGCCATACGGCGCAGCAAAACTGACGGCGAGAAACGCACAAACCTGTCGCGCCCGAGCCACAGTACAGCGAAAAATTTCTGTACGCCGTTAAGCATACGCAGCGGCGGGTTCCCTTCGCCTTTTTCACGCCCCGGCGCGCGACCAAACATCACCGACACTGGCACCATCTGCACATCCAGATTTGGGTTGCTACGGTGCAAATCGAGATAGTCGTGGAACAGCTTa                                                                                                                                                              <  2:330643/249‑1 (MQ=255)
                                                                                                    ccggcccgtgTTCTCCCGCCATACGGCGCAGCAAAACTGACGGCGAGAAACGCACAAAACTGTCGCGACCGAGCCACAGTACAGCGAAAAATTTCTGTACGCCGTTAAGCATACGCAGCGGCGGGTTCACTTCGCCTTTTTCACGCCCCGGCGCGCGACCAAACATCACCGACACTGGCACCATCTGCACATCCAGATTTGGGTTGCTACGGTGCAAATCGAGATAGTCGTGGAACAGCTTAATAGActc                                                                                                                                                      <  2:41790/245‑1 (MQ=255)
                                                                                                        gccgtgTTCATCCGCCATACGGCGCAGCGAAACTGACGGCGAGAAACGCACAAAACTGTCGCGACCGAGCCACAGTACAGCGAAAAATTTCTGTACGCCGTTAAGCATACGCAGCGGCGGGGTCCCTTCGCCTTTTTCACGCCCCCGCCCGCGGCCAAACATCACCGACCCCGGCCCCCCCTGCACACCCCGCTTTGGGGTTGTACCGGGCAAAACGGTATAAGCGGGGGACAACCTAATATACacttct                                                                                                                                                  >  2:24514/1‑250 (MQ=255)
                                                                                                          gtgttccccccGCCATAGGGCGCAGCAAAACTGACGGGGAGAACCGCACAAAGCTGCCGCGACCGGGCCACAGTACAGCGAAAAATTGCTGTCCGCCGTTAAGCATGCGCAGCGGCGGGTTCCCTCCGCCTTTTTCACGCCCCGGCGCGCGACCAAACATCACCGACACTGGCACCATCTGCACATCCAGATTTGGGTTGCTACGGTGCAAATCGAGATAGTCGTGGAACAGCTTAATAGACGCTTCttt                                                                                                                                                <  2:162065/241‑1 (MQ=255)
                                                                                                                 aTCCGCCATACGGCGCAGCGAAACTGACGGCGAGAAACGCACAAAACTGTCGCGACCGAGCCACAGTACAGCGAAAAATTTCTGTACGCCGTTAAGCATACGCAGCGGCGGGTTCACTTCGCCTTTTTCACGCCCCGGCGCGCGACCAAACATCACCGACACTGGCACCATCTGCACATCCAGATTTGGGTTGCTACGGTGCAAATCGAGATAGTCGTGGAACAGCTTAATAGACTCTTCTTTCGGCgt                                                                                                                                          <  1:396050/249‑1 (MQ=255)
                                                                                                                  tCCGCCATACGGCGCAGCGAAACTGACGGCGAGAAACGCACAAAACTGTCGCGACCGAGCCACAGTACAGCGAAAAATTTCTGTACGCCGTTAAGCATACGCAGCGGCGGGTTCACTTCGCCTTTTTCACGCCCCGGCGCGCGACCAAACATCACCGACACTGGCACCATCTGCACATCCAGATTTGGGTTGCTACGGTGCAAATCGAGATAGTCGTGGAACAGCTTAATAGACTCTTCTTTCGGCgtgt                                                                                                                                        <  1:13801/250‑1 (MQ=255)
                                                                                                                  tCCGCCATACGGCGCAGCGAAACTGACGGCGAGAAACGCACAAAACTGTCGCGACCGAGCCACAGTACAGCGAAAAATTTCTGTACGCCGTTAAGCATACGCAGCGGCGGGGTCACTTCGCCTTTTTTACGCCCCCGCGCGCGGCCAAAAATCACCGACACTGGCACCATCTGCACATCCAGATTTGGGGTGCTACGGGGCAAATCGAGATAGGCGTGGAACAGCTTAATAGACTCTTCTTTCGGCgtg                                                                                                                                         >  1:366772/1‑249 (MQ=255)
                                                                                                                     gCCATACGGCGCAGCGAAACTGACGGCGAGAAACGCACAAAACTGTCGCGACCGAGCCACAGTACAGCGAAAAATTTCTGTACGCCGTTAAGCATACGCAGCGGCGGGGTCACTTCGCCTTTTTTACGCCCCCGCGCGCGCCCAAAAAACACCCACACCTGGACCCTCTCCCCAACCCGGGTTGGGGTGGTTCGGGGCGAAAAGAGATAGTAGTGGAACAGGTTAATATACTCTTCtttttgcggggaa                                                                                                                                      >  2:230224/1‑239 (MQ=255)
                                                                                                                           cGGCGCAGCGAAACTGACGGCGAGAAACGCACAAAACTGTCGCGACCGAGCCACAGTACAGCGAAAAATTTCTGTACGCCGTTAAGCATACGCAGCGGCGGGTTCACTTCGCCTTTTTCACGCCCCGGCGCGCGACCAAACATCACCGACACTGGCACCATCTGCACATCCAGATTTGGGTTGCTACGGTGCAAATCGAGATAGTCGTGGAACAGCTTAATAGACTCTTCTTTCGGCGTGTAATAGGTg                                                                                                                                <  1:510343/249‑1 (MQ=255)
                                                                                                                                  gCGAAACTGACGGCGAAAAACGCACAAAACTGTCGCGACCGAGCCACAGTACAGCGAAAAATTTCTGTACGCCGTTAAGCATACGCAGCGGCGGGTTCACTTCGCCTTTTTCACGCCCCGGCGCGCGACCAAACATCACCGACACTGGCACCATCTGCACATCCAGATTTGGGTTGCTACGGTGCAAATCGAGATAGTCGTGGAACAGCTTAATAGACTCTTCTTTCGGCGTGTAATAGGTGAACACAcg                                                                                                                        <  2:250073/250‑1 (MQ=255)
                                                                                                                                        cggACGGGGAGAAACGCACAAAACTTTCGCGCCCGAGCCACAGTACAGCGAAAAATTTCTGTACGCCGTTAAGCATACGCAGCGGCGGGTTCACTTCGCCTTTTTCACGCCCCGGCGCGCGACCAAACATCACCGACACTGGCACCATCTGCACATCCAGATTTGGGTTGCTACGGTGCAAATCGAGATAGTCGTGGAACAGCTTAATAGACTCTTCTTTCGGCGTGTAATAGGTGAACACACGCGGccc                                                                                                                  <  2:445929/248‑1 (MQ=255)
                                                                                                                                           aCGGCGAGAAACGCACAAAACTGTCGCGACCGAGCCGCAGTACAGCGAAAAATTTCTGTACGCCGTTAAGCATACGCAGCGGCGGGTTCACTTCGCCTTTTTCACGCCCCGGCGCGCGACCAAACATCACCGACACTGGCACCATCTGCACATCCAGATTTGGGTTGCTACGGTGCAAATCGAGATAGTCGTGGAACAGCTTAATAGACTCTTCTTTCGGCGTGTAATAGGTGAACACACGCGGCccg                                                                                                                 <  1:300384/248‑1 (MQ=255)
                                                                                                                                            cGGCGAGAAACGCACAAAACTGTCGCGACCGAGCCACAGTACAGCGAAAAATTTCTGTACGCCGTTAAGCATACGCAGCGGCGGGTTCAACTCTCCTTTTTTACGCCCCCGCGCGCCACCCAAAAACACCGACACTGCCACCCCCTGCCCAACCACATTTGGGGTTTTACGGTGCACAAAGAGATAGTTGTGGAACAACGTATTAAACTCCTTTTTCTGCGTGTAATAGGGGAACACAcacgcgcccccg                                                                                                              >  2:689108/1‑242 (MQ=255)
                                                                                                                                             ggCGAGAAACGCACAAAACTGTCGCGACCGAGCCACAGTACAGCGAAAAATTTCTGTACGCCGTTAAGCATACGCAGCGGCGGGTTGCCTTTGCCTTTTTTACCCCCCCGCGCGCGACCCAACACCAACCACCCTGGCACCACCTGCCCATCCCGATTTGGGGTGGTACCGGGCTAATCCAAATAGTCGGGGACAAGCTTTATAAAACATTCTTTTTGCGCGTACTAGGTGGCCACACCAGGGccgccgc                                                                                                             >  2:862855/1‑249 (MQ=255)
                                                                                                                                                           aaaaCTGTCGCGACCGAGCCACAGTACAGCGAAAAATTTCTGTACGCCGTTAAGCATACGCAGCGGCGGGGTCACTTCGCCTTTTTTACGCCCCCGCGCGCGACCAAACATCACCGACACTGGCACCCTCTGCACATACAGATTTGGGTTGCTACGGTGCAAATCGAGATAGTCGTGGGACAGCTTAATAAACTCTTCTTTCTGCGGGTAATAGGGGAACACACGCGGCCCGCCGTGAATGAACACATAg                                                                                               >  1:234038/1‑250 (MQ=255)
                                                                                                                                                            aaaCTGTCGCGACCGAGCCACAGTACAGCGAAAAATTTCTGTACGCCGTTAAGCATACGCAGCGGCGGGTTCACTTCGCCTTTTTTACGCCCCCGCGCGCGACCCAACATCACCGACACTGGCACCATCTGCCCATCCAGATTTTGGGTGCTACGGTGCAAATCGAGATAGTCGTGGAACAGCTTAATAGACTCTTCTTTCGGCGTGTAATAGGTGAACACACGCGGCCCGCCGTGAATGAAAACATAgc                                                                                              >  1:256325/1‑250 (MQ=255)
                                                                                                                                                               cggTCGCGACCGCCCAACAGTACAGCAAAAAATTTCTGTACGCGGTAAAGCATCCGCGGCGGCGTGTCCACTTCGCCTTTTCCACGCCCGGCCGCGCGACAAAACACCACCGACACGGGCACCATCTGCACATCCAGATTTGGGTTGCTAGGGTGAAAAGCGAGATATTGGGGGAACAGCTTAATAGCCTCTTCTTTCGGGGTGTAATAGGTGACCACACGCGGCCCGCCGTGAATGAACACATAGcgcg                                                                                           <  2:814490/248‑1 (MQ=255)
                                                                                                                                                                  tCGCGCCCGAGCCACAGTACAGCAAAAAATTTCTTTACGCCTTAAAGCATCCGCAGCGGCGGTTTCCCTCCGCTTTTTTCACGCCCCGGCGCGCGACCAAACATCCCCGACACTGGCACCATCTGCACATCCAGATTTGGGTTGCTACGGTGCAAATCGAGATAGTCGTGGAACAGCTTAATAGACTCTTCTTTCGGCGTGTAATAGGTGAACACACGCGGCCCGCCGTGAATGAACACATAGCGCgg                                                                                          <  1:458857/248‑1 (MQ=255)
                                                                                                                                                                  ccgcgCCCGAGCCACAGTACAGCAAAAAATTTCTGTCCGCCGTAAAGCATACGCGGCGGCGGTTCCCCTCCCCTTTTTCCCCGCCCCGGCGCGCGACAAAACATCCCCGACACTGGCACCATCTGCACACCCAGATTTGGGTTGCTACGGTGCAAATCGAGATAGTCGTGGAACAGCTTAATAGACTCTTCTTTCGGCGTGTAATAGGTGAACACACGCGGCCCGCCGTGAATGAACACATAGCGCgg                                                                                          <  1:397429/247‑1 (MQ=255)
                                                                                                                                                                      gccggcgCCACAGTACAGCAAATATTTTCTGCCCGCCGTGAAGCAACCGCAGCGGGGTTTTCACTCCCCTTTTTCCCCCCCCGGGCGCGCGACAAAACCCCCCCGACACGGGCACCTTCTGCACATCCAGTTTGGGGTTGCTACGGTGAAAAGCGGGATAGTCGGGAAACAGTTTAATAGACTCTTCTTTCGGGGTGAAATAGGTGAACACCCGCGGCCCGCCGTGAATGAACACATAGCGCGGCAGTAg                                                                                    <  2:566085/244‑1 (MQ=255)
                                                                                                                                                                                          aaaaaTTTCTGTACGCCGTTAAGCATACGCAGCGGCGGGTTCACTTCGCCTTTTTCACGCCCCCGCGCGCGACCAAACATCACCGACACTGGCACCATCTGCACATCCAGATTTGGGGTGCTACGGTGCAAATCGAGATAGTCGTGGAACAGCTTAATAAACTCTTCTTTCGGCGTGTAATAGGTGAACACAAGCGGCCCCCCGTGAAAGAACAACAAACGCGGCAGGAGCGGGCCGTCGATTTTCcgcg                                                                >  1:228648/1‑250 (MQ=255)
                                                                                                                                                                                          aaaaaTTTCTGCCCCCCTTTAACCAACGCCGGGGGCGGTTTCACTCCCCTTTTTCCCCCCCCGGGCGCGCGACAAACCACCCCAGACACTGGCCCCATCTGCACATCCAGATTTGGTTTGCTCCGGTGAAAATCGAGATAGTCGGGAAACAGCTTAATAGACTCTTCTTCCGGCGTGTAAGAGTTGACCACCCGCGGCCCGCCGTGAATGAACACATAGCGCGGCAGTAGCGTGCCGTCGATTTCCAGCg                                                                <  2:903078/250‑1 (MQ=255)
                                                                                                                                                                                              aTTTCTGTACGCCGTTAAGCATACGCAGCGGCGGGTTCACTTCGCCTTTTTTACGCCCCCGCGCGCGACCAAACATCACCGACACTGGCACCATCTGCACATCCAGATTTGGGTTGCTACGGTGCAAATCGAGATAGTCGTGGAACAGCTTAATAGACTCTTCTTTCGGCGTGTAATAGGTGAACACACGCGGCCCCCCGGGAATGAACACATAGCGCGGCAGTAGCGGGCCGTCGATTTCCAGCGGctc                                                            >  1:290441/1‑250 (MQ=255)
                                                                                                                                                                                                                   tccGCAGCGGCGGGTTCCCTCCGCCTTTTTCCCCCCCCGGCGCGCGACCAAACATCCCCGACACTGGCACCATCTGCACATCCAGATTTGGGTTGCTACGGTGCAAATCGAGATAGTCGTGGAACAGCTTAATAGACTCTTCTTTCGGCGTGTAATAGGTGAACACACGCGGCCCGCCGTGAATGAACACATAGCGCGGCAGTAGCGTGCCGTCGATTTCCAGCGGCTCTAACGGGTCAGGCAAGTCAtg                                       <  1:936084/248‑1 (MQ=255)
                                                                                                                                                                                                                     cGCAGCGGGGGTTTCACTTCCCTTTTTCCACGCCCCGGCGCGCGACAAAACATCCCCGACACGGGCACCATCTGCACATCCAGATTTGGGTTGCTACGGTGCAAATCGAGATAGTCGTGGAACAGCTTAATAGACTCTTCTTTCGGCGTGTAATAGGTGAACACCCGCGGCCCGCCGTGAATGAACACATAGCGCGGCAGTAGCGTGCCGTCGATTTCCAGCGGCTCTAACGGGTCAGGCAAGTCAtgtg                                     <  1:317256/250‑1 (MQ=255)
                                                                                                                                                                                                                         aggggcggTTTCCCTCCGCCTTTTTCCCCCCCGGGCGCGCGACAAAACACCCCCGACACTGGCACCATCTGCACATCCAGATTTGGGTTGCTACGGTGAAAATCGAGATAGTCGTGAAACAGCTTAATAGCCTCTTCTTTCGGCGTGTAATAGGTAAACACCCGCGGCCCGCCGTGAATGAACACATAGCGCGGCAGTAGCGTGCCGTCGATTTCCAGCGGCTCTAACGGGTCAGGCAAGTCATGTGCCa                                  <  1:773540/247‑1 (MQ=255)
                                                                                                                                                                                                                             gcggGTTCACTTCGCCTTTTTCACGCCCCGGCGCGCGACCAAACATCACCGACACTGGCACCATCTGCACATCCAGATTTGGGTTGCTACGGTGCAAATCGAGATAGTCGTGGAACAGCTTAATAGACTCTTCTTTCGGCGTGTAATAGGTGAACACACGCGGCCCGCCGTGAATGAACACATAGCGCGGCAGTAGCGTGCCGTCGATTTCCAGCGGCTCTAACGGGTCAGGCAAGTCATGTGCCAGaca                              >  1:363310/1‑250 (MQ=255)
                                                                                                                                                                                                                                 gTTCACTTCGCCTTTTTCACGCCCCGGCGCGCGACCAAACATCACCGACACTGGCACCATCTGCACATCCAGATTTGGGTTGCTACGGTGCAAATCGAGATAGTCGTGGAACAGCTTAATAGACTCTTCTTTCGGCGTGTAATAGGTGAACACACGCGGCCCGCCGTGAATGAACACATAGCGCGGCAGTAGCGTGCCGTCGATTTCCAGCGGCTCTAACGGGTCAGGCAAGTCATGTGCCAGACACTgg                          >  1:848401/1‑250 (MQ=255)
                                                                                                                                                                                                                                   tCACTTCGCCTTTTTCACGCCCCGGCGCGCGACCAAACATCACCGACACTGGCACCATCTGCACATCCAGATTTGGGTTGCTACGGTGCAAATCGAGATAGTCGTGGAACAGCTTAATAGACTCTTCTTTCGGCGTGTAATAGGTGAACACACGCGGCCCGCCGTGAATGAACACATAGCGCGGCAGTAGCGTGCCGTCGATTTCCAGCGGCTCTAACGGGTCAGGCAAGTCATGTGCCAGACACTGGgc                        >  1:44470/1‑250 (MQ=255)
                                                                                                                                                                                                                                    cccTTCCCCTTTTCCCCGCCCCGGCGCGCACCAAAACCACCCCGCCGCGGGCACCTTCTGCTCAGCCAGATTTGGGTTGCGAGGGTGCAAACGGAGATAGTCGGGGAACAGCTTAATAGACTCTTCTTTCGGGGTGTAAGGGGTGACCACCCGCGGCCCGCCGTGAATGAACACATAGCGCGGCAGTAGCGTGCCGTCGATTTCCAGCGGCTCTAACGGGTCAGGCAAGTCATGTGCCAGACACTGGgcg                       <  2:614530/248‑1 (MQ=255)
                                                                                                                                                                                                                                          gCCTTTTTCACGCCCCGGCGCGCGACCAAACATCACCGACACTGGCACCATCTGCACATCCAGATTTGGGTTGCTACGGTGCAAATCGAGATAGTCGTGGAACAGCTTAATAGACTCTTCTTTCGGCGTGTAATAGGTGAACACACGCGGCCCGCCGTGAATGAACACATAGCGCGGCAGTAGCGTGCCGTCGATTTCCAGCGGCTCTAACGGGTCAGGCAAGTCATGTGCCAGACACTGGGCGCGCAAc                 >  2:484717/1‑250 (MQ=255)
                                                                                                                                                                                                                                            cTTTTTCACGCCCCGGCGCGCGACCAAACATCACCGACACTGGCACCATCTGCACATCCAGATTTGGGTTGCTACGGTGCAAATCGAGATAGTCGTGGAACAGCTTAATAGACTCTTCTTTCGGCGTGTAATAGGTGAACACACGCGGCCCGCCGTGAATGAACACATAGCGCGGCAGTAGCGTGCCGTCGATTTCCAGCGGCTCTAACGGGTCAGGCAAGTCATGTGCCAGACACTGGGCGCGCAACGt               >  1:606052/1‑250 (MQ=255)
                                                                                                                                                                                                                                                ttCACGCCCCGGCGCGCGACCAAACATCACCGACACTGGCACCATCTGCACATCCAGATTTGGGTTGCTACGGTGCAAATCGAGATAGTCGTGGAACAGCTTAATAGACTCTTCTTTCGGCGTGTAATAGGTGAACACACGCGGCCCGCCGTGAATGAACACATAGCGCGGCAGTAGCGTGCCGTCGATTTCCAGCGGCTCTAACGGGTCAGGCAAGTCATGTGCCAGACACTGGGCGCGCAACGTCAg            >  1:750590/1‑249 (MQ=255)
                                                                                                                                                                                                                                                 tCACGCCCCGGCGCGCGACCAAACATCACCGACACTGGCACCATCTGCACATCCAGATTTGGGTTGCTACGGTGCAAATCGAGATAGTCGTGGAACAGCTTAATAGACTCTTCTTTCGGCGTGTAATAGGTGAACACACGCGGCCCGCCGTGAATGAACACATAGCGCGGCAGTAGCGTGCCGTCGATTTCCAGCGGCTCTAACGGGTCAGGCAAGTCAtg                                       >  1:960076/1‑221 (MQ=255)
                                                                                                                                                                                                                                                        cccGGCGCGCGACCAAACATCACCGACACTGGCACCATCTGCACATCCAGATTTGGGTTGCTACGGTGCAAATCGAGATAGTCGTGGAACAGCTTAATAGACTCTTCTTTCGGCGTGTAATAGGTGAACACACGCGGCCCGCCGTGAATGAACACATAGCGCGGCAGTAGCGTGCCGTCGATTTCCAGCGGCTCTAACGGGTCAGGCAAGTCATGTGCCAGACACTGGGCGCGCAACGTCAGCAAATCTg    >  1:395/1‑250 (MQ=255)
                                                                                                                                                                                                                                                          cGGCGCGCGACCAAACATCACCGACACTGGCACCATCTGCACATCCAGATTTGGGTTGCTACGGTGCAAATCGAGATAGTCGTGGAACAGCTTAATAGACTCTTCTTTCGGCGTGTAATAGGTGAACACACGCGGCCCGCCGTGAATGAACACATAGCGCGGCAGTAGCGTGCCGTCGATTTCCAGCGGCTCTAACGGGTCAGGCAAGTCATGTGCCAGACACTGGGCGCGCAACGTCAGCAAATCTGCt  >  1:82971/1‑250 (MQ=255)
                                                                                                                                                                                                                                                            |                                                                                                                                                                                                                                                          
AGATCCTGACGAGCAGGCAAACGTGGGCCTACGGCAGCCAGACGTTGACGGGCAAAGTGCATACGCGCCACGCGCGCCAGTTTCTGAGCGATAGTTTTATCCGTGCCGTGTTCATCCGCCATACGGCGCAGCGAAACTGACGGCGAGAAACGCACAAAACTGTCGCGACCGAGCCACAGTACAGCGAAAAATTTCTGTACGCCGTTAAGCATACGCAGCGGCGGGTTCACTTCGCCTTTTTCACGCCCCGGCGCGCGACCAAACATCACCGACACTGGCACCATCTGCACATCCAGATTTGGGTTGCTACGGTGCAAATCGAGATAGTCGTGGAACAGCTTAATAGACTCTTCTTTCGGCGTGTAATAGGTGAACACACGCGGCCCGCCGTGAATGAACACATAGCGCGGCAGTAGCGTGCCGTCGATTTCCAGCGGCTCTAACGGGTCAGGCAAGTCATGTGCCAGACACTGGGCGCGCAACGTCAGCAAATCTGCT  >  NZ_CP009273/4245748‑4246245

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 26 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: