Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NZ_CP0092734,277,6380GA38.2% 111.0 / 33.0 76intergenic (‑339/‑54)acs/nrfAacetate‑‑CoA ligase/ammonia‑forming nitrite reductase cytochrome c552 subunit
Reads supporting (aligned to +/- strand):  ref base G (42/5);  new base A (0/29);  total (42/34)
Fisher's exact test for biased strand distribution p-value = 3.37e-16
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00
Rejected as consensus: Frequency below/above cutoff threshold.

ACGCAAAAGTAGAATTGTGCAAATAAACGGCAGGGTAATTTTTGAAGGTCAGCAACAAAAGTTGATTAATTCTTTGAGGAACATGCAGTTATGCATGCTGTTGAAAAAGAGGAAGATACTGACTAACTCTAAAGTGGTATTTTACATGCACTTACAATTGATTAAAGACAACATTCACAGTGTGGTTATTTGTTACACATAGGGGCGAGCAATGTCATGACAGTGTAGGTGCGGTTACTGTCGTGAAAAACAATAAAAACCGCCATTGCAACAATGGCGCAATTCGGATGAAGCCCCTATGACAAGGATAAAAATAAACGCACGCCGTATCTTCAGCTTATTGATTCCTTTTTTCTTTTTCACTTCTGTTCACGCTGAACAAACGGCTGCTCCCGCAAAACCTGTAACTGTGGAAGCGAAGAATGAAACCTTTGCCCCGCAGCATCCCGATCAATATCTCTCCTGGAAAGCCACCTCGGAACAGT  >  NZ_CP009273/4277394‑4277878
                                                                                                                                                                                                                                                      |                                                                                                                                                                                                                                                
aCGCAAAAGTAGAATTGTGCAAATAAACGGCAGGGTAATTTTTGAAGGTCAGCAACAAAAGTTGATTAATTCTTTGAGGAACATGCAGTTATGCATGCTGTTGAAAAAGAGGAAGATACTGACTAACTCTAAAGTGGTATTTTACATGCACTTACAATTGATTAAAGACAACATTCACAGTGTGGTTATTTGTTACACATAGGGGCGAGCAATGTCATGACAGTGTAGGTGCGGTTACTGTCGTGaaaaa                                                                                                                                                                                                                                             >  1:267161/1‑250 (MQ=255)
   aaaaaGTAGAATTGTGCAAATAAACGGCAGGGTAATTTTTGAAGGTCAGCAACAAAAGTTGATTAATTCTTTGAGGAACATGCAGTTATGCATGCTGTTGAAAAAGAGGAAGATACTGACTAACTCTAAAGTGGTATTTTACATGCACTTACAATTGATTAAAGACAACATTCACAGTGTGGTTATTTGTTACACATAGGGGCGAGCAATGTCATGACAGTGTAGGTGCGGTTACTGTCGTGAAAAACaa                                                                                                                                                                                                                                          <  2:849008/249‑1 (MQ=255)
           gAATTGTGCAAATAAACGGCAGGGTAATTTTTGAAGGTCAGCAACAAAAGTTGATTAATTCTTTGAGGAACATGCAGTTATGCATGCTGTTGAAAAAGAGGAAGATACTGACTAACTCTAAAGTGGTATTTTACATGCACTTACAATTGATTAAAGACAACATTCACAGTGTGGTTATTTGTTACACATAGGGGCGAGCAATGTCATGACAGTGTAGGTGCGGTTACTGTCGTGAAAAACAATAAAAAc                                                                                                                                                                                                                                   <  1:666134/249‑1 (MQ=255)
             aTTGTGCAAATAAACGGCAGGGTAATTTTTGAAGGTCAGCAACAAAAGTTGATTAATTCTTTGAGGAACATGCAGTTATGCATGCTGTTGAAAAAGAGGAAGATACTGACTAACTCTAAAGTGGTATTTTACATGCACTTACAATTGATTAAAGACAACATTCACAGTGTGGTTATTTGTTACACATAGGGGCGAGCAATGTCATGACAGTGTAGGTGCGGTTACTGTCGTGAAAAACAATAAAAACCGc                                                                                                                                                                                                                                >  1:345704/1‑250 (MQ=255)
                    aaaTAAACGGCAGGGTAATTTTTGAAGGTCAGCAACAAAAGTTGATTAATTCTTTGAGGAACATGCAGTTATGCATGCTGTTGAAAAAGAGGAAGATACTGACTAACTCTAAAGTGGTATTTTACATGCACTTACAATTGATTAAAGACAACATTCACAGTGTGGTTATTTGTTACACATAGGGGCGAGCAATGTCATGACAGTGTAGGTGCGGTTACTGTCGTGAAAAACAATAAAAACCGCCATTGc                                                                                                                                                                                                                          >  2:562871/1‑249 (MQ=255)
                      aTAAACGGCAGGTGAATTTTTGAAGTTCACAAAAAAAAGTTGATTAATTCTTTGAGTAACATGCATTTATGCTTGTTTTTAAAAAAAAGGAAGATACTAACTAACTCTAAAGTGGTATTTTACAGCCACTTACAATTTATTAAAAACAACATTCACAGTGTGTTTATTTGTTCCCCATAGGGGCGAGCAATGTCATGACAGTGTAGGTGCGGTTCCTTGCGTAAAAAACAAAAAAAACCGCCATTGcaac                                                                                                                                                                                                                       <  2:866097/250‑1 (MQ=255)
                         aaCGGCAGGGTAATTTTTGAAGGTCAGCAACAAAAGTTGATTAATTCTTTGAGGAACATGCAGTTATGCATGCTGTTGAAAAAGAGGAAGATACTGACTAACTCTAAAGTGGTATTTTACATGCACTTACAATTGATTAAAGACAACATTCACAGTGTGGTTATTTGTTACACATAGGGGCGAGCAATGTCATGACAGTGTAGGTGCGGTTACTGTCGTGAAAAACAATAAAAACCGCCATTGCAACAAt                                                                                                                                                                                                                    >  1:588381/1‑250 (MQ=255)
                          aCGGCAGGTTAATTTTTGAAGGTCAGCAAAAAAAGTTGATTATTTCTTTGAGGAACATGCAGTTATGCATGTTGTTAAAAAAGAGGAAGATACTTACTAACTATAAAGTGGTATTTTACATGCATTTACAATTGATTAAAGACAACATTCAAAGTGTGGTTATTTGTTACACATAGGGGCGAGCAATGTAAGGACAGTGTAGGTGCGGTTACTTTCGTAAAAAACAAAAAAAACCGCCATTGCAACAATg                                                                                                                                                                                                                   <  1:606716/250‑1 (MQ=255)
                          aCGGCAGGGTAATTTTTGAAGGTCAGCAACAAAAGTTGATTAATTCTTTGAGGAACATGCAGTTATGCATGCTGTTGAAAAAGAGGAAGATACTGACTAACTCTAAAGTGGTATTTTACATGCACTTACAATTGATTAAAGACAACATTCACAGTGTGGTTATTTGTTACACATAGGGGCGAGCAATGTCATGACAGTGTAGGTGCGGTTACTGTCGTGAAAAACAATAAAAACCGCCATTGCAACAATg                                                                                                                                                                                                                   >  1:768427/1‑250 (MQ=255)
                           cGGTAGGTTATTTTTTGAAGGTCAGCAACAAAAGTTGATTAATTTTTTGAGGAACATGCAGTTATGAATGCTGTTAAAAAAGAGGAATATACTGCCTAACTCTAAATTGTTATTTTACATGCACTTACAATTGATTAAAGACAACATTAACAGTGTGTTTATTTTTTACCCTTAGGGGCGAGCAATTTAATGACAGTGTAGGTGCGTTTCCTGTCGTGAAAAACAATAAAAACCGCCATTGCAACAATgg                                                                                                                                                                                                                  <  1:143633/250‑1 (MQ=255)
                                gggTAATTTTTGAAGGTCAGCAACAAAAGTTGATTAATTCTTTGAGGAACATGCAGTTATGCATGCTGTTGAAAAAGAGGAAGATACTGACTAACTCTAAAGTGGTATTTTACATGCACTTACAATTGATTAAAGACAACATTCACAGTGTGGTTATTTGTTACACATAGGGGCGAGCAATGTCATGACAGTGTAGGTGCGGTTACTGTCGTGAAAAACAATAAAAACCGCCATTGCAACAATGGCGCaa                                                                                                                                                                                                             >  2:31514/1‑250 (MQ=255)
                                gggTAATTTTAGAAAGTGAACAAAAAAAGTTAATTAATTTTTTAAGTAACATGCATTTATGCATGTTTTTAAAAAAGAGAAAAATCCTGAATAACTCTAATTTGGTATTTTACAAGCACTTAAAATTGATAAAAGAAAACATCCACAGTGTGGTTATTTGTTACAAATAGGGGCAAGCAATGTCCGGACAGTGTAGGTGCGGTTACTGTCGTGAAAAACAAAAAAAACCGCCATTGCAACAATGGCGCaa                                                                                                                                                                                                             <  2:435054/250‑1 (MQ=255)
                                  gTAATTTTTGAAGGTCAGCAACAAAAGTTGATTAATTCTTTGAGGAACATGCAGTTATGCATGCTGTTGAAAAAGAGGAAGATACTGACTAACTCTAAAGTGGTATTTTACATGCACTTACAATTGATTAAAGACAACATTCACAGTGTGGTTATTTGTTACACATAGGGGCGAGCAATGTCATGACAGTGTAGGTGCGGTTACTGTCGTGAAAAACAATAAAAACCGCCATTGCAACAATGGCGCAAtt                                                                                                                                                                                                           >  1:441162/1‑250 (MQ=255)
                                   tAATTTTTGAAGGTCAGCAACAAAAGTTGATTAATTCTTTGAGGAACATGCAGTTATGCATGCTGTTGAAAAAGAGGAAGATACTGACTAACTCTAAAGTGGTATTTTACATGCACTTACAATTGATTAAAGACAACATTCACAGTGTGGTTATTTGTTACACATAGGGGCGAGCAATGTCATGACAGTGTAGGTGCGGTTACTGTCGTGAAAAACAATAAAAACCGCCATTGCAACAATGGCGCAATTc                                                                                                                                                                                                          >  1:956033/1‑250 (MQ=255)
                                    aaTTTTTGAAGGTCAGCAACAAAAGTTGATTAATTCTTTGAGGAACATGCAGTTATGCATGCTGTTGAAAAAGAGGAAGATACTGACTAACTCTAAAGTGGTATTTTACATGCACTTACAATTGATTAAAGACAACATTCACAGTGTGGTTATTTGTTACACATAGGGGCGAGCAATGTCATGACAGTGTAGGTGCGGTTACTGTCGTGAAAAACAATAAAAACCGCCATTGCAACAATGGCGCAATTCg                                                                                                                                                                                                         >  1:414527/1‑250 (MQ=255)
                                     aTTTTTGAAGGTCAGCAACAAAAGTTGATTAATTCTTTGAGGAACATGCAGTTATGCATGCTGTTGAAAAAGAGGAAGATACTGACTAACTCTAAAGTGGTATTTTACATGCACTTACAATTGATTAAAGACAACATTCACAGTGTGGTTATTTGTTACACATAGGGGCGAGCAATGTCATGACAGTGTAGGTGCGGTTACTGTCGTGAAAAACAATAAAAACCGCCATTGCAACAATGGCGCAATTCg                                                                                                                                                                                                         >  2:287667/1‑249 (MQ=255)
                                        tttGAAGGTAAGAAAAAAAGTTTGATTAATTCTTTGAGGAACATGCATTTATGCATGCTTTTAAAAAAGAGAAAGATACTGACAAACTCAAAGGTGTTATTTTACATGCATTTACAATTGATTAAAGACAACTTTCACGTTGTGTTTATTTGTTACACATAGGGGGGAGCAATGTCTTGACAGTGTGGGTGCGGTTACTGTCGTAAAAAACAATAAAAACCGCCATTGCAACAATGGCGCAATTCGGAt                                                                                                                                                                                                      <  1:386234/249‑1 (MQ=255)
                                           gAAGTTCAGAAAAAAAAGTTGATTAATTCTTTGAGGAAAATGCATTTATGAAGGCTGTTAAAAAAGAGGAAGATACTGACTAACTCAAAAGTGGTATTTTACATGCACTAAAAATTGATAAAAAAAAACATTCAAAGTGTGTTTTTTTGTTACACATAGGGGCGAGAAATGTAATGACAGTGTGGGGGCGTTTACTGTCGTAAAAAAAAAAAAAAACCGCCATTGCAACAATGGCGCAATTCGGATGaa                                                                                                                                                                                                   <  2:663744/249‑1 (MQ=255)
                                           gAAGGTCAGCAACAAAAGTTGATTAATTTTTTGAGAAACTTGCAGTTATGCAGGCTGTTGAAAAAGAGGAATATATTGCCTAACTTTAAAGTGGTATTTTACATGCACTTACAATTGATTAAAAAAAACATTCACAGTGTGTTTATTTTTTACCCATAGGGGCGAGCATTGTCATGACAGTGTAGGTGGGTTTACTGTCGTGAAAACAAATAAAACCCGCCATTGCAACAATGGCGCAATTCGGATGAAg                                                                                                                                                                                                  <  1:377459/250‑1 (MQ=255)
                                                taagaaaaaaaaTTTGATTAATTCTTGGAGGAACATGCAGTTATGAATGTGGTTGAAAAAGAGGAAGATACTGATTAACTCAAAAGTGGTATTTTACATGCACTTACAATTGATAAAAAACAACATTCACAGTGTGTTTTTTTGTTACAAAGGGGGGCGAGAAATGTCATGACAGTGTAGGTGCGTTTACTGTCGTAAAAAACAAAAAAAACCGCCATTGCAACAATGGCGCAATTCGGATGAAGCCCCt                                                                                                                                                                                             <  2:109166/242‑1 (MQ=255)
                                                tCAGCAACAAAAGTTGATTAATTCTTTGAGGAACATGCAGTTATGCATGCTGTTGAAAAAGAGGAAGATACTGACTAACTCTAAAGTGGTATTTTACATGCACTTACAATTGATTAAAGACAACATTCACAGTGTGGTTATTTGTTACACATAGGGGCGAGCAATGTCATGACAGTGTAGGTGCGGTTACTGTCGTGAAAAACAATAAAAACCGCCATTGCAACAATGGCGCAATTCGGATGAAGcccc                                                                                                                                                                                              >  1:528101/1‑249 (MQ=255)
                                                   gCAACAAAAGTTGATTAATTCTTTGAGGAACATGCAGTTATGCATGCTGTTGAAAAAGAGGAAGATACTGACTAACTCTAAAGTGGTATTTTACATGCACTTACAATTGATTAAAGACAACATTCACAGTGTGTTTATTTGTTACACATAGGGGCGAGCAATGTCATGACAGTGTAGGTGCGGTTACTGTCGTAAAAAACAATAAAAACCGCCATTGCAACAATGGCGCAATTCGGATGAAGCCCCTATg                                                                                                                                                                                          <  1:242623/250‑1 (MQ=255)
                                                     aacaaAAGTTGATTAATTCTTTGAGGAACATGCAGTTATGCATGCTGTTGAAAAAGAGGAAGATACTGACTAACTCTAAAGTGGTATTTTACATGCACTTACAATTGATTAAAGACAACATTCACAGTGTGGTTATTTGTTACACATAGGGGCGAGCAATGTCATGACAGTGTAGGTGCGGTTACTGTCGTGAAAAACAATAAAAACCGCCATTGCAACAATGGCGCAATTCGGATGAAGCCCCTATGa                                                                                                                                                                                         >  1:21552/1‑249 (MQ=255)
                                                          aaGTTGATTAATTCTTTGAGGAACATGCAGTTATGCATGCTGTTAAAAAAGAGGAAGATACTGACTAACTCTAAAGTGTTATTTTACTTGCACTTACAATTGATTAAAAACAACATTCACAGTGTGGTTATTTGTTACACATAGGGGCGAGAAATGTCATGACAGTGTAGGTGCGTTTACTGTCGTAAAAAACAAAAAAAACCGCCATTGCAACAATGGCGCAATTCGGATGAAGCCCCTATGACAAGGa                                                                                                                                                                                   <  2:110603/250‑1 (MQ=255)
                                                             ttGATTAATTCTTTGAGAAACATGCAGTTATGCATTCTGTTGAAAAAGAGAAAGATACTGACTAACTCTAAAGTGTTATTTTACATGCACTTCAAATTGATTAAAGACAACATTCAAAGTGTGGTTATTTGTTACACATAGGGGCGAGCAATGTCATGACAGTGTGGGTGCGGTTACTGTCGTAAAAAACAAAAAAAACCGCCATTGCAACAATGGCGCAATTCGGATGAAGCCCCTATGACAAGGATaa                                                                                                                                                                                <  2:80073/250‑1 (MQ=255)
                                                                  tAATTCTTTGAGGAACATGCAGTTATGCATGCTGTTGAAAAAGAGGAAGATACTGACTAACTCTAAAGTGGTATTTTACATGCACTTACAATTGATTAAAGACAACATTCACAGTGTGGTTATTTGTTACACATAGGGGCGAGCAATGTCATGACAGTGTAGGTGCGGTTACTGTCGTGAAAAACAATAAAAACCGCCATTGCAACAATGGCGCAATTCGGATGAAGCCCCTATGACAAGGATAAAAAt                                                                                                                                                                            >  1:645213/1‑249 (MQ=255)
                                                                       ttttGAGGAACATGAAGTTATGCATGTTGTTGAAAAAGAGGAAGATACTAACTAACTCTAAAGTGGTATTTTACATGCACTTACAATTAATTAAAGAAAACATTCACAGTGTGGTTATTTGTTACCCAGAGGGGCGAGCAATGTCATGACAGTGTAGGTGCGGTTACTGTCGTAAAAAAAAATAAAAACCGCCATTGCAACAATGGCGCAATTCGGATGAAGCCCCTATGACAAGGATAAAAATAAacg                                                                                                                                                                       <  2:955092/248‑1 (MQ=255)
                                                                                     cAGTTATGCATGCTGTTGAAAAAGAGGAAGATACTGACTAACTATAAAGTGGTATTTTACATGCACTTACAATTGATTAAAGACAACATTCACAGTGTGGTTATTTGTTACACATAGGGGCGAGCAATGTCATGACAGTGTAGGTGCGGTTACTGTCGTGAAAAACAATAAAAACCGCCATTGCAACAATGGCGCAATTCGGATGAAGCCCCTATGACAAGGATAAAAATAAACGCACGCCGTATCtt                                                                                                                                                          >  1:219671/1‑248 (MQ=255)
                                                                                      aGTTATGCATGCTGTTGAAAAAGAGGAAGATACTGACTAACTCTAAAGTGGTATTTTACATGCACTTACAATTGATTAAAGACAACATTCACAGTGTGGTTATTTGTTACACATAGGGGCGAGCAATGTCATGACAGTGTAGGTGCGGTTACTGTCGTGAAAAACAATAAAAACCGCCATTGCAACAATGGCGCAATTCGGATGAAGCCCCTATGACAAGGATAAAAATAAACGCACGCCGTATCTTCAg                                                                                                                                                       >  2:365552/1‑250 (MQ=255)
                                                                                      aGTTATGCATGCTGTTGAAAAAGAGGAAGATACTGACTAACTCTAAAGTGGTATTTTACATGCACTTACAATTGATTAAAGACAACATTCACAGTGTGGTTATTTGTTACACATAGGGGCGAGCAATGTCATGACAGTGTAGGTGCGGTTACTGTCGTGAAAAACAATAAAAACCGCCATTGCAACAATGGCGCAATTCGGATGAAGCCCCTATGACAAGGATAAAAATAAACGCACGCCGTATCTTCAg                                                                                                                                                       >  1:357138/1‑250 (MQ=255)
                                                                                        ttATGCATGCTGTTGAAAAAGAGGAAGATACTGACTAACTCTAAAGTGGTATTTTACATGCACTTACAATTGATTAAAGACAACATTCACAGTGTGGTTATTTGTTACACATAGGGGCGAGCAATGTCATGACAGTGTAGGTGCGGTTACTGTCGTGAAAAACAATAAAAACCGCCATTGCAACAATGGCGCAATTCGGATGAAGCCCCTATGACAAGGATAAAAATAAACGCACGCCGTATCTTCAGCt                                                                                                                                                     >  1:1017955/1‑250 (MQ=255)
                                                                                                   gTTGAAAAAGAGGAAGATACTGACTAACTCTAAAGTGGTATTTTACATGCACTTACAATTGATTAAAGACAACATTCACAGTGTGGTTATTTGTTACACATAGGGGCGAGCAATGTCATGACAGTGTAGGTGCGGTTACTGTCGTGAAAAACAATAAAAACCGCCATTGCAACAATGGCGCAATTCGGATGAAGCCCCTATGACAAGGATAAAAATAAACGCACGCCGTATCTTCAGCTTATTGATTCCt                                                                                                                                          >  2:522227/1‑250 (MQ=255)
                                                                                                     tGAAAAAGAGGAAGATACTGACTAACTCTAAAGTGGTATTTTACATGCACTTACAATTGATTAAAGACAACATTCACAGTGTGGTTATTTGTTACACATAGGGGCGAGCAATGTCATGACAGTGTAGGTGCGGTTACTGTCGTGAAAAACAATAAAAACCGCCATTGCAACAATGGCGCAATTCGGATGAAGCCCCTATGACAAGGATAAAAATAAACGCACGCCGTATCTTCAGCTTATTGATTCCttt                                                                                                                                        >  1:277104/1‑250 (MQ=255)
                                                                                                           agagGAAGATACTGACTAACTCTAAAGTGGTATTTTACATGCACTTACAATTGATTAAAGACAACATTCACAGTGTGGTTATTTGTTACACATAGGGGCGAGCAATGTCATGACAGTGTCGGTGCGGTTACTGTCGTGAAAAACAATAAAAACCGCCATTGCAACAATGGCGCAATTCGGATGAAGCCCCCATGAAAAGGATAAAAATAAACGCACGCGGTATCTTCAGCTTATTGATTCATtttttctt                                                                                                                                  >  2:985882/1‑250 (MQ=255)
                                                                                                             agGAAGATACTGACTAACTCTAAAGTGGTATTTTACATGCACTTACAATTGATTAAAGACAACATTCACAGTGTGGTTATTTGTTACACATAGGGGCGAGCAATGTCATGACAGTGTAGGTGCGGTTACTGTCGTGAAAAACAATAAAAACCGCCATTGCAACAATGGCGCAATTCGGATGAAGCCCCTATGACAAGGATAAAAATAAACGCACGCCGTATCTTCAGCTTATTGATTCCTtttttctttt                                                                                                                                >  1:212955/1‑250 (MQ=255)
                                                                                                                      cTGACTAACTCTAAAGTGGTATTTTACATGCACTTACAATTGATTAAAGACAACATTCACAGTGTGGTTATTTGTTACACATAGGGGCGAGCAATGTCATGACAGTGTAGGTGCGGTTACTGTCGTGAAAAACAATAAAAACCGCCATTGCAACAATGGCGCAATTCGGATGAAGCCCCTATGACAAGGATAAAAATAAACGCACGCCGTATCTTCAGCTTATTGATTCCTTTTTTCTTTTTCACTTCTg                                                                                                                       >  1:512440/1‑250 (MQ=255)
                                                                                                                         aCTAACTCTAAAGTGGTATTTTACATGCACTTACAATTGATTAAAGACAACATTCACAGTGTGGTTATTTGTTACACATAGGGGCGAGCAATGTCATGACAGTGTAGGTGCGGTTACTGTCGTGAAAAACAATAAAAACCGCCATTGCAACAATGGCGCAATTCGGATGAAGCCCCTATGACAAGGATAAAAATAAACGCACGCCGTATCTTCAGCTTATTGATTCCTTTTTTCTTTTTCACTTCTGtt                                                                                                                     >  2:176555/1‑249 (MQ=255)
                                                                                                                          cTAACTCTAAAGTGGTATTTTACATGCACTTACAATTGATTAAAGACAACATTCACAGTGTGGTTATTTGTTACACATAGGGGCGAGCAATGTCATGACAGTGTAGGTGCGGTTACTGTCGTGAAAAACAATAAAAACCGCCATTGCAACAATGGCGCAATTCGGATGAAGCCCCTATGACAAGGATAAAAATAAACGCACGCCGTATCTTCAGCTTATTGATTCCTTTTTTCTTTTTCACTTCTGTTCa                                                                                                                   >  1:432768/1‑250 (MQ=255)
                                                                                                                           aaaCTCAAAAGTGTTTTTTTACAGCCAATTAAATTTGATTAAAAAAAAAATTCAAAGTGTGGTTTTTTGTTACACATGGGGGCGAAAAATGTCATGACAGTGTGGGGGCGGTTGCTGTCGTAAAAAAAAAAAAAAACCGCCATTGCAACAATGGCGCAATTCGGATGAAGCCCCTATGACAAGGATAAAAATAAACGCACGCCGTATCTTCAGCTTATTGATTCCTTTTTTCTTTTTCACTTCTGTTCAc                                                                                                                  <  2:899170/249‑1 (MQ=255)
                                                                                                                              ctatAAAGTGTTATTTTCAATGCATTAACAATTAATAAAAAACAACATTACAAGGGTGGTTTTTTTTTACACAAGGGGGCGAGCAATGTAATGACAGTGTAGGGGCGGTTCCTGTCGTAAAAAAAAAAAAAAACCGCCATTGCAACAATGGCGCAATTCGGATGAAGCCCCTATGACAAGGATAAAAATAAACGCACGCCGTATCTTCAGCTTATTGATTCCTTTTTTCTTTTTCACTTCTGTTCACGCt                                                                                                               <  2:942690/247‑1 (MQ=255)
                                                                                                                                ctAAAGTGGTATTTTACATGCACTTACAATTGATTAAAGACAACATTCACAGTGTGGTTATTTGTTACACATAGGGGCGAGCAATGTCATGACAGTGTAGGTGCGGTTACTGTCGTGAAAAACAATAAAAACCGCCATTGCAACAATGGCGCAATTCGGATGAAGCCCCTATGACAAGGATAAAAATAAACGCACGCCGTATCTTCAGCTTATTGATTCCTTTTTTCTTTTTCACTTCTGTTCACGCTg                                                                                                              >  2:247495/1‑249 (MQ=255)
                                                                                                                                      ggtttttttACATCCATTAAAATTTGATAAAAAAAAACTTCCAAGGTGTGTTTTTTTTTAACCAAAAGGGGCGAAAAATTCAATGAAGGTGAAGTGGGGGTAACTGTAGAAAAAAAAAAAAAAACCCGCCATTGCAACAATGGCGCAATTCGGATGAAGCCCCTATGACAAGGATAAAAATAAACGCACGCCGTATCTTCAGCTTATTGATTCCTTTTTTCTTTTTCACTTCTGTTCACGCTGAACAAAc                                                                                                       <  2:279089/245‑1 (MQ=255)
                                                                                                                                          aTTTTACATGCACTTACAATTGATTAAAGACAACATTCACAGTGTGGTTATTTGTTACACATAGGGGCGAGCAATGTCATGACAGTGTAGGTGCGGTTACTGTCGTGAAAAACAATAAAAACCGCCATTGCAACAATGGCGCAATTCGGATGAAGCCCCTATGACAAGGATAAAAATAAACGCACGCCGTATCTTCAGCTTATTGATTCCTTTTTTCTTTTTCACTTCTGTTCACGCTGAACAAACGgct                                                                                                   >  1:852674/1‑250 (MQ=255)
                                                                                                                                                cATGCACTTACAATTGATTAAAGACAACATTCACAGTGTGGTTATTTGTTACACATAGGGGCGAGCAATGTCATGACAGTGTAGGTGCGGATACTGTCGTGAAAAACAATAAAAACCGCCATTGAAACAATGGCGCAATTCGGATGAAGCCCCTATGACAAGGATAAAAATAAACGCACGCCGTATCTTCAGCTTATTGATTCCTTTTATCTTTTTCACTTCTTTTCACGCTGAACAAACCGCTGTTcac                                                                                             >  1:552183/1‑248 (MQ=255)
                                                                                                                                                    cACTTACAATTGATTAAAGACAACATTCACAGTGTGGTTATTTGTTACACATAGGGGCGAGCAATGTCATGACAGTGTAGGTGCGGTTACTGTCGTGAAAAACAATAAAAACCGCCATTGCAACAATGGCGCAATTCGGATGAAGCCCCTATGACAAGGATAAAAATAAACGCATGCCGTATCTTCAGCTTATTGATTCCTTTTTTCTTTTTCACTTCTGTTCACGTTGAACAAACGGCTGCTCCCGct                                                                                          >  2:356335/1‑248 (MQ=255)
                                                                                                                                                      cTTACAATTGATTAAAGACAACATTCACAGTGTGGTTATTTGTTACACATAGGGGCGAGCAATGTCATGACAGTGTAGGTGCGGTTACTGTCGTGAAAAACAATAAAAACCGCCATTGCAACAATGGCGCAATTCGGATGAAGCCCCTATGACAAGGATAAAAATAAACGCACGCCGTATCTTCAGCTTATTGATTCCTTTTTTCTTTTTCACTTCTGTTCACGCTGAACAAACGGCTGCTCCCGCaaaa                                                                                       >  1:286935/1‑250 (MQ=255)
                                                                                                                                                        taaaaTTGATAAAAAACAACATTCACAGTGTGGTTATTTGTTACAAATAGGGGCGAGCATTGTCATGCAAGTGTAGGTGGGTTTCCTGTCGTAAAAAAAAAAAAAAACCGCCATTGCAACAATGGCGCAATTCGGATGAAGCCCCTATGACAAGGATAAAAATAAACGCACGCCGTATCTTCAGCTTATTGATTCCTTTTTTCTTTTTCACTTCTGTTCACGCTGAACAAACGGCTGCTCCCGCAAAAc                                                                                      <  1:803094/246‑1 (MQ=255)
                                                                                                                                                        tACAATTGATTAAAGACAACATTCACAGTGTGGTTATTTGTTACACATAGGGGCGAGCAATGTCATGACAGTGTAGGTGCGGTTACTGTCGTGAAAAACAATAAAAACCGCCATTGCAACAATGGCGCAATTCGGATGAAGCCCCTATGACAAGGATAAAAATAAACGCACGCCGTATCTTCAGCTTATTGATTCCTTTTTTCTTTTTCACTTCTGTTCACGCTGAACAAACGGCTGCTCCCGCAAAAcc                                                                                     >  1:601812/1‑250 (MQ=255)
                                                                                                                                                           aaTTGATTAAAGACAACATTCACAGTGTGGTTATTTGTTACACATAGGGGCGAGCAATGTCATGACAGTGTAGGTGCGGTTACTGTCGTGTAAAACAATAAAAACCGCCATTGCAACAATGGCGCAATTCGGATGAAGCCCCTATGACGAGGATAAAAATAAACGCACGCCGTATCTTCAGATTATTGATTCCTTTTTTCTTTTTCACTTCTGTTCACGCTGAACAAACTGCTGCTCCCGCAAAACCTg                                                                                   >  1:807662/1‑249 (MQ=255)
                                                                                                                                                           aaTTGATTAAAGACAACATTCACAGTGTGGTTATTTGTTACACATAGGGGCGAGCAATGTCATGACAGTGTAGGTGCGGTTACTGTCGTGAAAAACAATAAAAACCGCCATTGCAACAATGGCGCAATTCGGATGAAGCCCCTATGACAAGGATAAAAATAAACGCACGCCGTATCTTCAGCTTATTGATTCCTTTTTTCTTTTTCACTTCTGTTCACGCTGAACAAACGGCTGCTCCCGCAAAACCTg                                                                                   >  1:969010/1‑249 (MQ=255)
                                                                                                                                                                 ttAAAGACAACATTCACAGTGTGGTTATTTGTTACACATAGGGGCGAGCAATGTCATGACAGTGAAGGTGCGGTTACTGGCGTGAAAAACAATAAAAACCGCCATTGCAACAATGGCGCAATTCGGATGAAGCCCCTATGACAAGGATACAAATAAACGCACGCCGTATCTTCAGCTTATTGATTCCTTTTTTCTTTTTCACTTCTGTTCACGCTGAACAAACGGCTGCTCCCGCAAAACCTGTAACtgt                                                                            >  1:52613/1‑250 (MQ=255)
                                                                                                                                                                 aaaaaGACAACAGTCATGGGTTGGTTATTTGTTGACAAGAGGGGCAAGAAATATCATTAAAGGTTAGGTGCAGTTACTGTCGTAAAAAAAAAAAAAACCCGCCATTGCAACAATGGCGCAATTCGGATGAAGCCCCTATGACAAGGATAAAAATAAACGCACGCCGTATCTTCAGCTTATTGATTCCTTTTTTCTTTTTCACTTCTGTTCACGCTGAACAAACGGCTGCTCCCGCAAAACCTGTAACtgt                                                                            <  2:45335/248‑1 (MQ=255)
                                                                                                                                                                   aaaGACAACTTACACGGTGGGTTTATTTGTTACACATAGGGGAGAGAAATGTCAAGACAGGGTAGGTGCGGTTTCTTTCGTAAAAAACAAAAAAAACCGCCATTGCAACAATGGCGCAATTCGGATGAAGCCCCTATGACAAGGATAAAAATAAACGCACGCCGTATCTTCAGCTTATTGATTCCTTTTTTCTTTTTCACTTCTGTTCACGCTGAACAAACGGCTGCTCCCGCAAAACCTGTAACtgtg                                                                           <  1:581664/249‑1 (MQ=255)
                                                                                                                                                                     aGACAACATTCACAGTGTGGTTATTTGTTACACATAGGGGCGAGCAATGTCATGACAGTGTAGGTGCGGTTACTGTCGTGAAAAACAATAAAAACCGCCATTGCAACAATGGCGCAATTCGGATGAAGCCCCTATGACAAGGATAAAAATAAACGCACGCCGTATCTTCAGCTTATTGATTCCTTTTTTCTTTTTCACTTCTGTTCACGCTGAACAAACGGCTGCTCCCGCAAAACCTGTAACTGTgg                                                                          >  1:382674/1‑248 (MQ=255)
                                                                                                                                                                                 caGTGTGGTTATTTGTTACACATAGGGGCGAGCAATGTCATGACAGTGTAGGTGCGGTTACTGTCGTGAAAAACAATAAAAACCGCCATTGCAACAATGGCGCAATTCGGATGAAGCCCCTATGACAAGGATAAAAATAAACGCACGCCGTATCTTCAGCTTATTGATTCCTTTTTTCTTTTTCACTTCTGTTCACGCTGAACAAACGGCTGCTCCCGCAAAACCTGTAACTGTGGAAGCGAAGAATGa                                                             >  1:1019552/1‑249 (MQ=255)
                                                                                                                                                                                     gtgGTTATTTGTTACACATAGGGGCGAGCAATGTCATGACAGTGTAGGTGCGGTTACTGTCGTGAAAAACAATAAAAACCGCCATTGCAACAATGGCGCAATTCGGATGAAGCCCCTATGACAAGGATAAAAATAAACGCACGCCGTATCTTCAGCTTATTGATTCCTTTTTTCTTTTTCACTTCTGTTCACGCTGAACAAACGGCTGCTCCCGCAAAACCTGTAACTGTGGAAGCGAAGAATGAAACCt                                                        >  1:1006367/1‑250 (MQ=255)
                                                                                                                                                                                     gggtttATTTGTTAAACAGAGGGGAGAGAAATGAAATAAGAGTGTAGTTGGGTTTACTGTCGTAAAAAAAAAAAAAAACCGCCATTGCAACAATGGCGCAATTCGGATGAAGCCCCTATGACAAGGATAAAAATAAACGCACGCCGTATCTTCAGCTTATTGATTCCTTTTTTCTTTTTCACTTCTGTTCACGCTGAACAAACGGCTGCTCCCGCAAAACCTGTAACTGTGGAAGCGAAGAATGAAACCt                                                        <  2:486630/246‑1 (MQ=255)
                                                                                                                                                                                      ggtttttttGTTACACAAGGGGGCAAGAAATGTAATACCAGGTTGGGTGCGGTTATTGTCGAAAAAAAAAAAAAAAACCGCCATTGCAACAATGGCGCAATTCGGATGAAGCCCCTATGACAAGGATAAAAATAAACGCACGCCGTATCTTCAGCTTATTGATTCCTTTTTTCTTTTTCACTTCTGTTCACGCTGAACAAACGGCTGCTCCCGCAAAACCTGTAACTGTGGAAGCGAAGAATGAAACCtt                                                       <  2:947794/244‑1 (MQ=255)
                                                                                                                                                                                        gTTTTTTTTTACCACAGAGGGGGGAGAAATTTAATGACAGGGAAGGTGCGGTTAGTGTCGTAAAAAACAAAAAAAACCGCCATTGCAACAATGGCGCAATTCGGATGAAGCCCCTATGACAAGGATAAAAATAAACGCACGCCGTATCTTCAGCTTATTGATTCCTTTTTTCTTTTTCACTTCTGTTCACGCTGAACAAACGGCTGCTCCCGCAAAACCTGTAACTGTGGAAGCGAAGAATGAAACCttt                                                      <  1:710481/250‑1 (MQ=255)
                                                                                                                                                                                        gTTTTTTGTTACACAGGGGGGCGAGAAATGTCATGACAGTGTAGGTGCGGTTACTGTCGAAAAAAACAAAAAAACCCGCCATTGCAACAATGGCGCAATTCGGATGAAGCCCCTATGACAAGGATAAAAATAAACGCACGCCGTATCTTCAGCTTATTGATTCCTTTTTTCTTTTTCACTTCTGTTCACGCTGAACAAACGGCTGCTCCCGCAAAACCTGTAACTGTGGAAGCGAAGAATGAAACCttt                                                      <  2:262216/249‑1 (MQ=255)
                                                                                                                                                                                                 tACACATAGGGGCGAGCAATGTCATGACAGTGTAGGTGCGGTTACTGTCGTGAAAAACAATAAATACCGCCATTGCAACAATGCCGCAATTCGGATGAAGCCCCTATGACAAGGATAAAAATAAACGCACGCCGTATCTTCAGCTTATTGATTCCTTTTTTATTTTTCACTTCTGTTCACGCTGAACACACGGCTGCTCCCGCAAAACCTGTAACTTTGTAAGCGCAGAATGACACCTTTGCCCCgcag                                             >  2:742156/1‑249 (MQ=255)
                                                                                                                                                                                                    aaacaTAGGGGGAAGAAATGTAATGACGGTGGAGGGGCGGTTCCTGTCGAAAAAAACAAAAAAAACCGCCATTGCAACAATGGCGCAATTCGGATGAAGCCCCTATGACAAGGATAAAAATAAACGCACGCCGTATCTTCAGCTTATTGATTCCTTTTTTCTTTTTCACTTCTGTTCACGCTGAACAAACGGCTGCTCCCGCAAAACCTGTAACTGTGGAAGCGAAGAATGAAACCTTTGCCCCgcagc                                            <  2:768427/247‑1 (MQ=255)
                                                                                                                                                                                                     cacaTAGGGGCGAGCAATGTCATGACAGTGTAGGTGCGGTTACTGTCGTGAAAAACAATAAAAACCGCCATTGCAACAATGGCGCAATTCGGATGAAGCCCCTATGACAAGGATAAAAATAAACGCACGCCGTATCTTCAGCTTATTGATTCCTTTTTTCTTTTTCACTTCTGTTCACGCTGAACAAACGGCTGCTCCCGCAAAACCTGTAACTGTGGAAGCGAAGAATGAAACCTTTGCCCCGCAGCAt                                          >  1:961508/1‑250 (MQ=255)
                                                                                                                                                                                                        atggggggggaaaaTGTCATGAAAGGGGAGGTGGGGTTCCTCTGGGAAAAAAAAAAAAAAACCGCCATTGAAACAATGGCGCAATTCGGATGAAGCCCCTATGACAAGGATAAAAATAAACGCACGCCGTATCTTCAGCTTATTGATTCCTTTTTTCTTTTTCACTTCTGTTCACGCTGAACAAACGGCTGCTCCCGCAAAACCTGTAACTGTGGAAGCGAAGAATGAAACCTTTGCCCCGCAGCATccc                                       <  1:689742/238‑1 (MQ=255)
                                                                                                                                                                                                        aTAGGGGCGAGCAATGTCATGACAGTGTAGGTGCGGTTACTGTCGTGAAAAACAATAAAAACCGCCATTGCAACAATGGCGCAATTCGGATGAAGCCCCTATGACAAGGATAAAAATAAACGCACGCCGTATCTTCAGCTTATTGATTCCTTTTTTCTTTTTCACTTCTGTTCACGCTGAACAAACGGCTGCTCCCGCAAAACCTGTAACTGTGGAAGCGAAGAATGAAACCTTTGCCCCGCAGCATccc                                       >  1:480265/1‑250 (MQ=255)
                                                                                                                                                                                                          gggggagcgaaaTGTCAAGACAGTGTAGGGGGGTTTACGGTCGAAAAAAAAAAAAAAAACCGCCATTGCAACAATGGCGCAATTCGGATGAAGCCCCTATGACAAGGATAAAAATAAACGCACGCCGTATCTTCAGCTTATTGATTCCTTTTTTCTTTTTCACTTCTGTTCACGCTGAACAAACGGCTGCTCCCGCAAAACCTGTAACTGTGGAAGCGAAGAATGAAACCTTTGCCCCGCAGCATCCCGa                                     <  2:441162/240‑1 (MQ=255)
                                                                                                                                                                                                          aGGGGCGAGCAATGTCATGACAGTGTAGGTGCGGTTACTGTCGTGAAAAACAATAAAAACCGCCATTGCAACAATGGCGCAATTCGGATGAAGCCCCTATGACAAGGATAAAAATAAACGCACGCCGTATCTTCAGCTTATTGATTCCTTTTTTCTTTTTCACTTCTGTTCACGCTGAACAAACGGCTGCTCCCGCAAAACCTGTAACTGTGGAAGCGAAGAATGAAACCTTTGCCCCGCAGCATCCCGa                                     >  1:439005/1‑250 (MQ=255)
                                                                                                                                                                                                           ggggggAGAAATGTAATGACGGTGGGGGGGCGTTTATTGTCGTAAAAAAAAAAAAAAACCGCCATTGCAACAATGGCGCAATTCGGATGAAGCCCCTATGACAAGGATAAAAATAAACGCACGCCGTATCTTCAGCTTATTGATTCCTTTTTTCTTTTTCACTTCTGTTCACGCTGAACAAACGGCTGCTCCCGCAAAACCTGTAACTGTGGAAGCGAAGAATGAAACCTTTGCCCCGCAGCATCCCGAt                                    <  1:172727/250‑1 (MQ=255)
                                                                                                                                                                                                                  gCAATGTCATGACAGTGTAGGTGCGGTTACTGTCGTGAAAAACAATAAAAACCGCCATTGCAACAATGGCGCAATTCGGATGAAGCCCCTATGACAAGGATAAAAATAAACGCACGCCGTATCTTCAGCTTATTGATTCCTTTTTTCTTTTTCACTTCTGTTCACGCTGAACAAACGGCTGCTCCCGCAAAACCTGTAACTGTGGAAGCGAAGAATGAAACCTTTGCCCCGCAGCATCCCGATCAATAtc                             >  2:493336/1‑250 (MQ=255)
                                                                                                                                                                                                                          atgaaggtgtAGGTGCGGTTACTGTGGTAAAAAAAAAAAAAAACCGCCATTGCAACAATGGCGCAATTCGGATGAAGCCCCTATGACAAGGATAAAAATAAACGCACGCCGTATCTTCAGCTTATTGATTCCTTTTTTCTTTTTCACTTCTGTTCACGCTGAACAAACGGCTGCTCCCGCAAAACCTGTAACTGTGGAAGCGAAGAATGAAACCTTTGCCCCGCAGCATCCCGATCAATATCTCTCCTg                      <  1:552602/243‑1 (MQ=255)
                                                                                                                                                                                                                           tGACAGTGTAGGTGCGGTTACTGTCGTGAAAAACAATAAAAACCGCCATTGCAACAATGGCGCAATTCGGATGAAGCCCCTATGACAAGGATAAAAATAAACGCACGCCGTATCTTCAGCTTATTGATTCCTTTTTTCTTTTTCACTTCTGTTCACGCTGAACAAACGGCTGCTCCCGCAAAACCTGTAACTGTGGAAGCGAAGAATGAAACCTTTGCCCCGCAGCATCCCGATCAATATCTCTCCTgg                     >  1:190442/1‑249 (MQ=255)
                                                                                                                                                                                                                           tGACAGTGTAGGGGCGTTTACTGTCGTAAAAAACAAAAAAAACCGCCATTGCAACAATGGCGCAATTCGGATGAAGCCCCTATGACAAGGATAAAAATAAACGCACGCCGTATCTTCAGCTTATTGATTCCTTTTTTCTTTTTCACTTCTGTTCACGCTGAACAAACGGCTGCTCCCGCAAAACCTGTAACTGTGGAAGCGAAGAATGAAACCTTTGCCCCGCAGCATCCCGATCAATATCTCTCCTGGa                    <  1:301232/250‑1 (MQ=255)
                                                                                                                                                                                                                                gtgtGGGTGCGTTTACTGTCGTAAAAAAAAAAAAAAACCGCCATTGCAACAATGGCGCAATTCGGATGAAGCCCCTATGACAAGGATAAAAATAAACGCACGCCGTATCTTCAGCTTATTGATTCCTTTTTTCTTTTTCACTTCTGTTTACGCTGAACAAACGGCTGCTCCCGCAAAACCTGTAACTGTGGAAGCGAAGAATGAAACCTTCGCCCCGCAGCATCCCGATCAATATCTCTCCTGGAAAGcc               <  1:562871/250‑1 (MQ=255)
                                                                                                                                                                                                                                  ggaGGGGCGGTTACGGTCGTAAAAAACAAAAAAACCCGCCATTGCAACAATGGCGCAATTCGGATGAAGCCCCTATGACAAGGATAAAAATAAACGCACGCCGTATCTTCAGCTTATTGATTCCTTTTTTCTTTTTCACTTCTGTTCACGCTGAACAAACGGCTGCTCCCGCAAAACCTGTAACTGTGGAAGCGAAGAATGAAACCTTTGCCCCGCAGCATCCCGATCAATATCTCTCCTGGAAAGCCAc             <  1:394417/248‑1 (MQ=255)
                                                                                                                                                                                                                                      gTGCGTTTCCTGTAGAAAAAAAAAAAAAAAACCGCCATTGCAACAATGGCGCAATTCGGATGAAGCCCCTATGACAAGGATAAAAATAAACGCACGCCGTATCTTCAGCTTATTGATTCCTTTTTTCTTTTTCACTTCTGTTCACGCTGAACAAACGGCTGCTCCCGCAAAACCTGTAACTGTGGAAGCGAAGAATGAAACCTTTGCCCCGCAGCATCCCGATCAATATCTCTCCTGGAAAGCCACCTCg         <  2:969010/250‑1 (MQ=255)
                                                                                                                                                                                                                                              aCTGTCGAAAAAAAAAAAAAAACCCGCCATTGCAACAATGGCGCAATTCGGATGAAGCCCCTATGACAAGGATAAAAATAAACGCACGCCGTATCTTCAGCTTATTGATTCCTTTTTTCTTTTTCACTTCTGTTCACGCTGAACAAACGGCTGCTCCCGCAAAACCTGTAACTGTGGAAGCGAAGAATGAAACCTTTGCCCCGCAGCATCCCGATCAATATCTCTCCTGGAAAGCCACCTCGGAACAGt  <  1:589988/249‑1 (MQ=255)
                                                                                                                                                                                                                                                      |                                                                                                                                                                                                                                                
ACGCAAAAGTAGAATTGTGCAAATAAACGGCAGGGTAATTTTTGAAGGTCAGCAACAAAAGTTGATTAATTCTTTGAGGAACATGCAGTTATGCATGCTGTTGAAAAAGAGGAAGATACTGACTAACTCTAAAGTGGTATTTTACATGCACTTACAATTGATTAAAGACAACATTCACAGTGTGGTTATTTGTTACACATAGGGGCGAGCAATGTCATGACAGTGTAGGTGCGGTTACTGTCGTGAAAAACAATAAAAACCGCCATTGCAACAATGGCGCAATTCGGATGAAGCCCCTATGACAAGGATAAAAATAAACGCACGCCGTATCTTCAGCTTATTGATTCCTTTTTTCTTTTTCACTTCTGTTCACGCTGAACAAACGGCTGCTCCCGCAAAACCTGTAACTGTGGAAGCGAAGAATGAAACCTTTGCCCCGCAGCATCCCGATCAATATCTCTCCTGGAAAGCCACCTCGGAACAGT  >  NZ_CP009273/4277394‑4277878

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: