| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NZ_CP009273 | 4,036,390 | 0 | A | G | 39.2% | 76.1 / 11.8 | 51 | N206D (AAT→GAT) | srkA | stress response kinase SrkA |
| Reads supporting (aligned to +/- strand): ref base A (16/15); new base G (20/0); total (36/15) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.06e-04 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
| Rejected as consensus: Frequency below/above cutoff threshold. | |||||||||||
GGTTGGGCGTTATTTAGGGCGTATGCACCAGACGGGGCGCAAACAGCTTTTTATCCATCGCCCGACCATCGGTTTGAACGAATATCTCATTGAGCCACGCAAGCTGTTTGAGGACGCTACACTGATACCTTCCGGGTTGAAAGCGGCATTCCTGAAAGCGACAGATGAGCTGATTGCCGCCGTTACAGCACACTGGCGGGAAGA‑TTTCACCGTTCTGCGGCTACATGGAGACTGCC‑ACGCCGGGAATATTCTCTGGCGC‑GATGGTCCAATGTTTGTTGATCTGGATGATGCACGTAATGGTCCAGCCGTTCAGGATTTGTGGATGTTGCTCAATGGCGATAAAGCCGAGCAGCGGATGCAACTGGAAACTATTATTGAAGCTTATGAAGAATTTAGCGAGTTCGACACCGCTGAAATCGGACTGATTGAACCTTTACGCGCCATGCGTTTGGTTTATTATCTTGCCTGGCTAATGCGGCGTTGGGCTGATCCCG > NZ_CP009273/4036146‑4036639 | ggTTGGGCGTTATTTAGGGCGTATGCACCAGACGGGGCGCAAACAGCTTTTTATCCATCGCCCGACCATCGGTTTGAACGAATATCTCATTGAGCCACGCAAGCTGTTTGAGGACGCTACACTGATACCTTCCGGGTTGAAAGCGGCATTCCTGAAAGCGACAGATGAGCTGATTGCCGCCGTTACAGCACACTGGCGGGAAGA‑TTTCACCGTTCTGCGGCTACATGGAGACTGCC‑ACGCCGGGGATAtt > 1:49236/1‑250 (MQ=255)ggTTGGGCGTTATTTAGGGCGTATGCACCAGACGGGGCGCAAACAGCTTTTTATCCATCGCCCGACCATCGGTTTGAACGAATATCTCATTGAGCCACGCAAGCTGTTTGAGGACGCTACACTGATACCTTCCGGGTTGAAAGCGGCATTCCTGAAAGCGACAGATGAGCTGATTGCCGCCGTTACAGCACACTGGCGGGAAGA‑TTTCACCGTTCTGCGGCTACATGGAGACTGCC‑ACGCCGGGAATAtt > 1:162349/1‑250 (MQ=255) gTTGGGCGTTATTTAGGGCGTATGCACCAGACGGGGCGCAAACAGCTTTTTATCCATCGCCCGACCATCGGTTTGAACGAATATCTCATTGAGCCACGCAAGCTGTTTGAGGACGCTACACTGATACCTTCCGGGTTGAAAGCGGCATTCCTGAAAGCGACAGATGAGCTGATTGCCGCCGTTACAGCACACTGGCGGGAAGG‑TTTCACCGGTCTGCCGCGACATGGAGAACGCC‑CCGCCGGGGATAttt > 2:52379/1‑249 (MQ=255) gggCGTTATTTAGGGCGTATGCACCAGACGGGGCGCAAACAGCTTTTTATCCATCGCCCGACCATCGGTTTGAACGAATATCTCATTGAGCCACGCAAGCTGTTTGAGGACGCTACACTGATACCTTCCGGGTTGAAAGCGGCATTCCTGAAAGCGACAGATGAGCTGATTGCCGCCGTTACAGCACACTGGCGGGAAGA‑TTTTACCCTTCTGCGGCTCCATGGGGACTGGC‑ACCCCGGGGATATTctct > 2:317152/1‑250 (MQ=255) ttAGGGCGTATGCACCAGACGGGGCGCAAACAGCTTTTTATCCATCGCCCGACCATCGGTTTGAACGAATATCTCATTGAGCCACGCAAGCTGTTTGAGGACGCTACACTGATACCTTCCGGGTTGAAAGCGGCATTCCTGAAAGCGACAGATGAGCTGATTGCCGCCGTTACAGCACACTGGCGGGAAGG‑ATTCACCGCTCTGCGGTTTCCAGGAGACTGCCAACGCCGGGAGTATtcctcgcgccttg > 2:632465/1‑239 (MQ=255) tATGCACCAGACGGGGCGCAAACAGCTTTTTATCCATCGCCCGACCATCGGTTTGAACGAATATCTCATTGAGCCACGCAAGCTGTTTGAGGACGCTACACTGATACCTTCCGGGTTGAAAGCGGCATTCCTGAAAGCGACAGATGAGCTGATTGCCGCCGTTACAGCACACTGGCGGGAAGA‑TTTTACCGCTCAGCGGCTCCATAGAGAATGGA‑ACGCCCGGGATATTTCCTGGGCC‑GGGGGGCCAAtg > 2:840015/1‑250 (MQ=255) gggaaaaCAGCTTTTTATCCATCGCCCGACCATCGGTTTAAACGAATATCTCATTGAGCCACGCAGGCTTGTGGAGGACGCTAAGCTGATACCTCCCGGGTTGAAAGCGGCATACCTGAAAGGGACGGATGTGCTGATTGCCGCCGTTACAGCACACTGGCGGGAAGA‑TTTCACCGTTCTGCGGCTACATGGAGACTGCC‑TCGCCGGGAAGATTCTCTGGCGC‑GATGGTCCAATGTTTGTTGATCTGgat < 2:352680/246‑1 (MQ=255) gcAAACAGCTTTTTATCCATCGCCCGACCATCGGTTTGAACGAATATCTCATTGAGCCACGCAAGCTGTTTGAGGACGCTACACTGATACCTTCCGGGTTGAAAGCGGCATTCCTGAAAGCGACAGATGAGCTGATTGCCGCCGTTACAGCACACTGGCGGGAGGA‑ATTCTCCGTTCTTCGGGGACAGGGGGACTGCC‑ACGCCGGGGAAATTTTCTGGGGG‑GAGGGGCCCAAGTTTGTTGGTCTgggggg > 2:245684/1‑246 (MQ=255) gcAAACAGCTTTTTATCCATCGCCCGACCATCGGTTTGAACGAATATCTCATTGAGCCACGCAAGCTGTTTGAGGACGCTACACTGATACCTTCCGGGTTGAAAGCGGCATTCCTGAAAGCGACAGATGAGCTGATTGCCGCCGTTACAGCACACTGGCGGGAAGA‑TTTCTCCGTTCTGCGGCTACCTGGAGACTGCC‑ACGCCGGGGATATTTCTTGGCGC‑GATGGGCCAACGTTTTTTGATCTGggtga > 2:717265/1‑250 (MQ=255) aaaCAGCTTTTTATCCATCGCCCGACCATCGGTTTGAACGAATATCTCATTGAGCCACGCAAGCTGTTTGAGGACGCTACACTGATACCTTCCGGGTTGAAAGCGGCATTCCTGAAAGCGACAGATGAGCTGATTGCCGCCGTTACAGCACACTGGCGGGAAAAGTTTCACC‑TTCTGCGGCTACATGGAGAACGCC‑ACGCCGGGGATATTCTCTGGCGC‑GCTGGTGCACTGTTTGTTGGTCAgggggagg > 2:992574/1‑244 (MQ=255) gCCCGACCATCGGTTTGAACGAATATCTCATTGAGCCACGCAAGCTGTTTGAGGACGCTACACTGATACCTTCCGGGTTGAAAGCGGCATTCCTGAAAGCGACAGATGAGCTGATTGCCGCCGTTACAGCACACTGGCGGGAAGA‑TTTTACCGTTCTGCGGCTACATGGAGACTGCC‑ACGCCGGGGATATTTTCTGGCGC‑GATGGTCCAATGTTTGTTGGTCTGGATGGTTCACGTAAAGGGCCAGCCGt > 1:128027/1‑250 (MQ=255) gccgtgggTTTGAACAGATATCTCATTGAGCCACGCAAGCTGTTGGAGGCCGCTACCCTGATCCCTTCCGGGTTGAAAGCGGCATTCCTGAAAGCGACAGATGAGCTGATTGCCGCCGTTACAGCACACTGGCGGGAAGA‑TTTCACCGTTCTGCGGCTACATGGAGACTGCC‑ACGCCGGGAATATTCTCTGGCGC‑GATGGTCCAATGTTTGTTGATCTGGATGATGCACGTAATGGTCCAGCCGTTCAgg < 2:757866/244‑1 (MQ=255) cGGTTTGAACGAATATCTCATTGAGCCACGCAAGCTGTTTGAGGACGCTACACTGATACCTTCCGGGTTGAAAGCGGCATTCCTGAAAGCGACAGATGAGCTGATTGCCGCCGTTACAGCACACTGGCGGGAAGA‑TTTCACCGTTCTGCGGCTACATGGAGACTGCC‑ACGCCGGGGATATTCTCTGGCGC‑GATGGTCCCATGTTTGTTGATCTTGGTGATGCACGTAATGGTCCAGCCGTTCAGGGTTtg > 1:716103/1‑250 (MQ=255) cGAATATCTCATTGAGCCACGCAAGCTGTTTGAGGACGCTACACTGATACCTTCCGGGTTGAAAGCGGCATTCCTGAAAGCGACAGATGAGCTGATTGCCGCCGTTACAGCACACTGGCGGGAAGA‑TTTTACCGTTCTGCGGCTACATGGAGACTGCC‑ACCCCGGGAATATTCTCTGGCGC‑GATGGTCCAATGTTTGTTGATCTGGATGATGCACGTAATGGTCCAGCCGTTCAGGATTTGTGGATGTTg > 1:640295/1‑250 (MQ=255) aGCCACGCAAGCTGTTTGAGGACGCTACACTGATACCTTCCGGGTTGAAAGCGGCATTCCTGAAAGCGACAGATGAGCTGATTGCCGCCGTTACAGCACACTGGCGGGAAGA‑TTTTACCGTTTTGCGGCTACATGGAGAATGCC‑CCGCCGGGGATATTCTCTGGCGCGGCTGGTCC‑ATTTTTGTTTTTCCGGAGGGTGTCCGTAATGGTCCACCCCCTTTGGGTTTTTTGGTGTTTCTCAATggggtga > 2:886446/1‑244 (MQ=255) aGCCACGCAAGCTGTTTGAGGACGCTACACTGATACCTTCCGGGCTGAAAGCGGCATTCCTGAAAGCGACAGATGAGCTGATTGCCGCCGTTACAGCACACTGGCGGGAAGA‑TTTTACCGTTCTGCGGCTACATGGAGACTGCC‑ACGCCGGGGATATTCTCTGGCGC‑GATGGGCCCATGTTTGTTGATCTGGGTGATGCACGTAATGGGCCAGCCGTTCAGGATTTGTGGGTGTTTCTCAATGGCGGTa > 1:60371/1‑249 (MQ=255) aCGCAAGCTGTTTGAGGACGCTACACTGATACCTTCCGGGTTGAAAGCGGCATTCCTGAAAGCGACAGATGAGCTGATTGCCGCCGTTACAGCACACTGGCGGGGAGA‑ATTTACCCTTCTGCGGCTACATGGAGACTGCC‑CCGCCGGGAGTATTCTCCGGCGC‑GCTGGCGCCATGGTTGTTGATCTGGTGGATGTCCGTAATGGTTCAGCCCTTCAGGGTTTTTGGAGGTTGCTGAATGGCGTTAAAGcc > 2:605277/1‑250 (MQ=255) tGTTTGAGGACGCTACACTGATACCTTCCGGGTTGAAAGCGGCATTCCTGAAAGCGACAGATGAGCTGATTGCCGCCGTTACAGCACACTGGCGGGGAGA‑TTTCACCGTTCTGCGGCCACATGGAGACTGCC‑ACGCCGGGGATATTCTCTTGCGC‑GGTGGTCCAATGTTTGTTGATCTGGATGATGCACGTAATGGTCCAGCCGTTCAGGGTTTGTTGAGGGTGTTCAAATGCGGTAAAGCCGGGCcgcg > 2:173146/1‑250 (MQ=255) gTTTGAGGACGCTACACTGATACCTTCCGGGTTGAAAGCGGCATTCCTGAAAGCGACAGATGAGCTGATTGCCGCCGTTACAGCACACTGGCGGGAAGA‑TTTCACCGTTCTGCGGCTACATGGAGACTGCC‑ACGCCGGGGATATTTTCTGGCGC‑GATGGGCCAATGTTTGTTGATCTGGATGATGCACGTAATGGTCCAGCCGTTCAGGGTTTGTGGGTGTTGCTCAATGGGGATAAAGCCGGGCAGCgg > 1:495761/1‑250 (MQ=255) tttGAGGACGCTACACTGATCCCTTCCGGGTTGAAAGCGGCATTCCTGAAAGCGACAGATGAGCTGATTGCCGCCGTTACAGCACACTGGCGGGAAGA‑TTTCACCGTTCTGCGGCTACATGGAGACTGCC‑ACGCCGGGAATATTCTCTGGCGC‑GATGGTCCAATGTTTGTTGATCTGGATGATGCACGTAATGGTCCAGCCGTTCAGGATTTGTGGATGTTGCTCAATGGCGATAAAGCCGAGCAGCgg < 2:846637/249‑1 (MQ=255) gACGCTACACTGATACCTTCCGGGTTGAAAGCGGCATTCCTGAAAGCGACAGATGAGCTGATTGCCGCCGTTACAGCACACTGGCGGGAAGA‑TTTCACCGTTCTGCGGCTACATGGAGAATGCC‑ACGCCGGGGATATTCTCTGGGGC‑GGTGGGCCCATGTTTGTTTATCTGGGTGATGCACGGAAAGGGCCAGCCGTTCAGGGTTTTTGGGTGTTGTGCAATGGGGAGAAAGGCGAGCAGCGGATGCaa > 2:314003/1‑249 (MQ=255) ccTTCCGGGTTGAAAGCGGCATTCCTGAAAGCGACAGATGAGCTGATTGCCGCCGTTACAGCACACTGGCGGGAAGA‑TTTTACCGTTCTGCGGCTACATGGAGACTGCC‑ACGCCGGGGATATTCTCTGGCGC‑GATGGTCCCATGTTTGTTGATCTGGGTGATGCACGTAATGGTCCCGCCGTTTCGGATTTTTGGGTGTTGCTCAATGGCGATAAAACCGAGCAGCGGATGCAACTGGGAACTattattt > 1:145068/1‑249 (MQ=255) cTTCCGGGTTGAAAGCGGCATTCCTGAAAGCGACAGATGAGCTGATTGCCGCCGTTACAGCACACTGGCGGGAAGA‑TTTCACCGTTCTGCGGCTACATGGAGACTGCC‑ACGCCGGGAATATTCTCTGGCGC‑GATGGTCCAATGTTTGTTGATCTGGATGATGCACGTAATGGTCCAGCCGTTCAGGATTTGTGGATGTTGCTCAATGGCGATAAAGCCGAGCAGCGGATGCAACTGGAAACTATTATTGa < 1:801432/250‑1 (MQ=255) gggTTGAAAGCGGCATTCCTGAAAGCGACAGATGAGCTGATTGCCGCCGTTACAGCACACTGGCGGGAAGA‑TTTCACCGTTCTGCGGCTACATGGAGACTGCC‑ACGCCGGGAATATTCTCTGGCGC‑GATGGTCCAATGTTTGTTGATCTGGATGATGCACGTAATGGTCCAGCCGTTCAGGATTTGTGGATGTTGCTCAATGGCGATAAAGCCGAGCAGCGGATGCAACTGGAAACTATTATTGAAGCtt < 1:103053/250‑1 (MQ=255) aaaGCGGCATTCCTGAAAGCGACAGATGAGCTGATTGCCGCCGTTACAGCACACTGGCGGGAAGA‑TTTTACCGTTCTGCGGCTACATGGAGACATCC‑ACGCCGGGGATATTCTCTGGCGC‑GGTGGGCCAATGTTTGTTGTACTGGGTGGTGTCAGGAATGGTCCAGCCGTTCAGGGTTTTTGTTTGTTTCTCAATGGCGATAAAACCGAGCAGCGGGAGCCAATGGGAACAATAATTGTACCTTTTgaa > 2:801307/1‑249 (MQ=255) aaGCGGCATTCCTAAAAGCGACAGATGAGCTGATTGCCGCCGTTACAGCACACTGGCGGGAAGA‑TTTCACCGTTCTGCGGCTACATGGAGACTGCC‑ACGCCGGGAATATTCTCTGGCGC‑GATGGTCCAATGTTTGTTGATCTGGATGATGCACGTAATGGTCCAGCCGTTCAGGATTTGTGGATGTTGCTCAATGGCGATAAAGCCGAGCAGCGGATGCAACTGGAAACTATTATTGAAGCTTATgaaga < 2:383812/250‑1 (MQ=255) aTTCCTGAAAGCGACAGATGAGCTGATTGCCGCCGTTACAGCACACTGGCGGGGAGA‑TTTTCCCGTTCTGCGGCTACATGGAGACTGCC‑ACGCCGGGGATATTCTCTGGCGC‑GATGGTCCCATGTTTGTTGATCTGGGTGATGCACGTAATGGTCCAGCCGTTCAGGGTTTGTGGGTGTTGCTCAATTGCGATAAAGCCGAGCAGCGGATGCAAATGGGAACTATTATTGAAGCTTATGAAAAATTTAGc > 1:931484/1‑250 (MQ=255) aaaGCGACAGATGAGCTGATTGCCGCCGTTACAGCACACTGGCGGGAAGA‑TTTCACCGTTCTGCGGCTACATGGAGACTGCC‑ACGCCGGGAATATTCTCTGGCGC‑GATGGTCCAATGTTTGTTGATCTGGATGATGCACGTAATGGTCCAGCCGTTCAGGATTTGTGGATGTTGCTCAATGGCGATAAAGCCGAGCAGCGGATGCAACTGGAAACTATTATTGAAGCTTATGAAGAATTTAGCGAGTTc < 1:367364/249‑1 (MQ=255) gCGACAGATGAGCTGATTGCCGCCGTTACAGCACACTGGCGGGAAGA‑TTTCACCGTTCTGCGGCTACATGGAGACTGCC‑ACGCCGGGGATATTTTCTGGCGC‑GATGGTCCAATGTTTGTTGATCTGGATGATGCACGTAATGGTCCAGCCGTTCAGGATTTGTGGATGTTGCTCAATGGCGATAAAGCCGAGCAGCGGGTGCAACTGGGAAATATTTTTTAAGCTTATGAAGAATTTAGCGGGTTCGaca > 1:864905/1‑250 (MQ=255) aGATGAGCTGATTGCCGCCGTTACAGCACACTGGCGGGAAGA‑TTTCACCGTTCTGCGGCTACATGGAGACTGCC‑ACGCCGGGAATATTCTCTGGCGC‑GATGGTCCAATGTTTGTTGATCTGGATGATGCACGTAATGGTCCAGCCGTTCAGGATTTGTGGATGTTGCTCAATGGCGATAAAGCCGAGCAGCGGATGCAACTGGAAACTATTATTGAAGCTTATGAAGAATTTAGCGAGTTCGACACCGCt < 1:671966/250‑1 (MQ=255) gCTGATTGCCGCCGTTACAGCACACTGGCGGGAAGA‑ATTTACCGTTCTGCGGCCACATGGGGGCTGCC‑CCGCCGGGGATATTCTTTGGCGC‑GGTGGGCCCATGGTTGTTTGTCTGGGTGGTGGCCGGAATGGTGCAGCCGGTCCGGGTTTGTGGGTGGTGGTCAATGGGGATAAAACCGAGCAGCGGGGGGAAATGGGAAATATTATTTGAGCTTTTGAAGAAATTAGAGGGGTCGGAACCGCTGgaa > 2:525665/1‑248 (MQ=255) gccgccGTTACAGCACACTGGCGGGAAGA‑TTTTACCGGTCTGCGGCGGCCAGGAGACTGCC‑ACGCCGGGGATATTTTCTTGCGC‑GATGGGCCAATGTTTGTTGATTTGGATGATGGACGTAAAGGTTCAGCCGTTTAGGGTTTGTGGATGTTTGTCAAAGGCGGTAAAAAACAGAAGCGGATGCAAATGGGAAATAATTTTGTAGAGTATTAAAAAATTATAGGGTTTGACACCCGTGGAATCgagcgga > 2:720531/1‑244 (MQ=255) cGGGAAGA‑TTTCACCGTTCTGCGGCTACATGGAGACTGCC‑ACGCCGGGAATATTCTCTGGCGC‑GATGGTCCAATGTTTGTTGATCTGGATGATGCACGTAATGGTCCAGCCGTTCAGGATTTGTGGATGTTGCTCAATGGCGATAAAGCCGAGCAGCGGATGCAACTGGAAACTATTATTGAAGCTTATGAAGAATTTAGCGAGTTCGACACCGCTGAAATCGGACTGATTGAAACTTTACGCTCCATGc > 2:74403/1‑250 (MQ=255) gggAAGA‑TTTCACCGTTCTGCGGCTACATGGAGACTGCC‑ACGCCGGGAATATTCTCTGGCGC‑GATGGTCCAATGTTTGTTGATCTGGATGATGCACGTAATGGTCCAGCCGTTCAGGATTTGTGGATGTTGCTCAATGGCGATAAAGCCGAGCAGCGGATGCAACTGGAAACTATTATTGAAGCTTATGAAGAATTTAGCGAGTTCGACACCGCTGAAATCGGACTGATTGAACCTTTACGCGCCATGCg > 1:173229/1‑250 (MQ=255) gggAAGA‑TTTCACCGTTCTGCGGCTACATGGAGACTGCC‑ACGCCGGGAATATTCTCTGGCGC‑GATGGTCCAATGTTTGTTGATCTGGATGATGCACGTAATGGTCCAGCCGTTCAGGATTTGTGGATGTTGCTCAATGGCGATAAAGCCGAGCAGCGGATGCAACTGGAAACTATTATTGAAGCTTATGAAGAATTTAGCGAGTTCGACACCGCTGAAATCGGACTGATTGAACCTTTACGCGCCATGCg > 1:533984/1‑250 (MQ=255) gAAGA‑TTTCACCGTTCTGCGGCTACATGGAGACTGCC‑ACGCCGGGAATATTCTCTGGCGC‑GATGGTCCAATGTTTGTTGATCTGGATGATGCACGTAATGGTCCAGCCGTTCAGGATTTGTGGATGTTGCTCAATGGCGATAAAGCCGAGCAGCGGATGCAACTGGAAACTATTATTGAAGCTTATGAAGAATTTAGCGAGTTCGACACCGCTGAAATCGGACTGATTGAACCTTTACGCGCCATGCGtt > 2:73487/1‑250 (MQ=255) gA‑TTTCACCGTTCTGCGGCTACATGGAGACTGCC‑ACGCCGGGAATATTCTCTGGCGC‑GATGGTCCAATGTTTGTTGATCTGGATGATGCACGTAATGGTCCAGCCGTTCAGGATTTGTGGATGTTGCTCAATGGCGATAAAGCCGAGCAGCGGATGCAACTGGAAACTATTATTGAAGCTTATGAAGAATTTAGCGAGTTCGACACCGCTGAAATCGGACTGATTGAACCTTTACGCGCCATGCGTTTgg > 1:598554/1‑250 (MQ=255) tttCACCGTTCTGCGGCTACATGGAGACTGCC‑ACGCCGGGAATATTCTCTGGCGC‑GATGGTCCAATGTTTGTTGATCTGGATGATGCACGTAATGGTCCAGCCGTTCAGGATTTGTGGATGTTGCTCAATGGCGATAAAGCCGAGCAGCGGATGCAACTGGAAACTATTATTGAAGCTTATGAAGAATTTAGCGAGTTCGACACCGCTGAAATCGGACTGATTGAACCTTTACGCGCCATGCGTTTGGtt > 1:825561/1‑250 (MQ=255) ttCTGCGGCTACATGGAGACTGCC‑ACGCCGGGAATATTCTCTGGCGC‑GATGGTCCAATGTTTGTTGATCTGGATGATGCACGTAATGGTCCAGCCGTTCAGGATTTGTGGATGTTGCTCAATGGCGATAAAGCCGAGCAGCGGATGCAACTGGACACTATTATTGAAGCTTATGAAGAATTTAGCGAGTTCGACACCGCTGAAATCGGACTGCTTGAACCTTTACGCGTCATGCGTTTGGTTTATTTTCt > 2:163873/1‑250 (MQ=255) gCGGCTACATGGAGACTGCC‑ACGCCGGGAATATTCTCTGGCGC‑GATGGTCCAATGTTTGTTGATCTGGATGATGCACGTAATGGTCCAGCCGTTCAGGATTTGTGGATGTTGCTCAATGGCGATAAAGCCGAGCAGCGGATGCAACTGGAAACTATTATTGAAGCTTATGAAGAATTTAGCGAGTTCGACACCGCTGAAATCGGACTGATTGAACCTTTACGCGCCATGCGTTTGGTTTATTATCTTGcc > 1:248200/1‑250 (MQ=255) cGGCTACATGGAGACTGCC‑ACGCCGGGAATATTCTCTGGCGC‑GATGGTCCAATGTTTGTTGATCTGGATGATGCACGTAATGGTCCAGCCGTTCAGGATTTGTGGATGTTGCTCAATGGCGATAAAGCCGAGCAGCGGATGCAACTGGAAACTATTATTGAAGCTTATGAAGAATTTAGCGAGTTCGACACCGCTGAAATCGGACTGATTGAACCTTTACGCGCCATGCGTTTGGTTTATTATCTTg < 1:734840/247‑1 (MQ=255) ggCTACATGGAGACTGCC‑ACGCCGGGAATAGTCTCTGGCGC‑GATGGTCCAATGTTTGTTGATCTGGATGATGCACGTAATGGTCCAGCCGTTCAGGATTTGTGGATGTTGCTCAATGGCGATAAAGCCGAGCAGCGGATGCAACTGGAAACTATTATTGAAGCTTATGAAGAATTTAGCGAGTTCGACACCGCTGAAATCGGACTGATTGAACCTTTACGCGCCATGCGTTTGGTTTATTATCTTGCCTg < 1:120031/250‑1 (MQ=255) gCTACATGGAGACTGCC‑ACGCCGGGAATATTCTCTGGCGC‑GATGGTCCAATGTTTGTTGATCTGGATGATGCACGTAATGGTCCAGCCGTTCAGGATTTGTGGATGTTGCTCAATGGCGATAAAGCCGAGCAGCGGATGCAACTGGAAACTATTATTGAAGCTTATGAAGAATTTAGCGAGTTCGACACCGCTGAAATCGGACTGATTGAACCTTTACGCGCCATGCGTTTGGTTTATTATCTTGCCTgg < 2:162349/250‑1 (MQ=255) gCTACATGGAGACTGCC‑ACGCCGGGAATATTCTCTGGCGC‑GATGGTCCAATGTTTGTTGATCTGGATGATGCACGTAATGGTCCAGCCGTTCAGGATTTGTGGATGTTGCTCAATGGCGATAAAGCCGAGCAGCGGATGCAACTGGAAACTATTATTGAAGCTTATGAAGAATTTAGCGAGTTCGACACCGCTGAAATCGGACTGATTGAACCTTTACGCGCCATGCGTTTGGTTTATTATCTTGCCTgg > 2:58659/1‑250 (MQ=255) cTACATGGAGACTGCC‑ACGCCGGGAATATTCTCTGGCGC‑GATGGTCCAATGTTTGTTGATCTGGATGATGCACGTAATGGTCCAGCCGTTCAGGATTTGTGGATGTTGCTCAATGGCGATAAAGCCGAGCAGCGGATGCAACTGGAAACTATTATTGAAGCTTATGAAGAATTTAGCGAGTTCGACACCGCTGAAATCGGACTGATTGAACCTTTACGCGCCATGCGTTTGGTTTATTATCTTGCCTGGc < 1:992574/250‑1 (MQ=255) cATGGAGACTGCC‑ACGCCGGGAATATTCTCTGGCGC‑GATGGTCCAATGTTTGTTGATCTGGATGATGCACGTAATGGTCCAGCCGTTCAGGATTTGTGGATGTTGCTCAATGGCGATAAAGCCGAGCAGCGGATGCAACTGGAAACTATTATTGAAGCTTATGAAGAATTTAGCGAGTTCGACACCGCTGAAATCGGACTGATTGAACCTTTACGCGCCATGCGTTTGGTTTATTATCTTGCCTGGCt < 1:840015/248‑1 (MQ=255) aTGGAGACTGCC‑ACGCCGGGAATATTCTCTGGCGC‑GATGGTCCAATGTTTGTTGATCTGGATGATGCACGTAATGGTCCAGCCGTTCAGGATTTGTGGATGTTGCTCAATGGCGATAAAGCCGAGCAGCGGATGCAACTGGAAACTATTATTGAAGCTTATGAAGAATTTAGCGAGTTCGACACCGCTGAAATCGGACTGATTGAACCTTTACGCGCCATGCGTTTGGTTTATTATCTTGCTTGGCTAAt < 1:717265/250‑1 (MQ=255) aTGGAGACTGCC‑ACGCCGGGAATATTCTCTGGCGC‑GATGGTCCAATGTTTGTTGATCTGGATGATGCACGTAATGGTCCAGCCGTTCAGGATTTGTGGATGTTGCTCAATGGCGATAAAGCCGAGCAGCGGATGCAACTGGAAACTATTATTGAAGCTTATGAAGAATTTAGCGAGTTCGACACCGCTGAAATCGGACTGATTGAACCTTTACGCGCCATGCGTTTGGTTTATTATCTTGCCTGGCTAAt > 1:588139/1‑250 (MQ=255) agaCTGCC‑ACGCCGGGAATATTCTCTGGCGC‑GATGGTCCAATGTTTGTTGATCTGGATGATGCACGTAATGGTCCAGCCGTTCAGGATTTGTGGATGTTGCTCAATGGCGATAAAGCCGAGCAGCGGATGCAACTGGAAACTATTATTGAAGCTTATGAAGAATTTAGCGAGTTCGACACCGCTGAAATCGGACTGATTGAACCTTTACGCGCCATGCGTTTGGTTTATTATCTTGCCTGGCTAATgcgg > 1:876645/1‑250 (MQ=255) cc‑ACGCCGGGAATATTCTCTGGCGC‑GATGGTCCAATGTTTGTTGATCTGGATGATGCACGTAATGGTCCAGCCGTTCAGGATTTGTGGATGTTGCTCAATGGCGATAAAGCCGAGCAGCGGATGCAACTGGAAACTATTATTGAAGCTTATGAAGAATTTAGCGAGTTCGACACCGCTGAAATCGGACTGATTGAACCTTTACGCGCCATGCGTTTGGTTTATTATCTTGCCTGGCTAATGCGGCGTTg < 2:60371/249‑1 (MQ=255) cGCCGGGAATATTCTCTGGCGC‑GATGGTCCAATGTTTGTTGATCTGGATGATGCACGTAATGGTCCAGCCGTTCAGGATTTGTGGATGTTGCTCAATGGCGATAAAGCCGAGCAGCGGATGCAACTGGAAACTATTATTGAAGCTTATGAAGAATTTAGCGAGTTCGACACCGCTGAAATCGGACTGATTGAACCTTTACGCGCCATGCGTTTGGTTTATTATCTTGCCTGGCTAATGCGGCGTTGGGCt > 1:764290/1‑250 (MQ=255) aaTATTCTCTGGCGC‑GATGGTCCAATGTTTGTTGATCTGGATGATGCACGTAATGGTCCAGCCGTTCAGGATTTGTGGATGTTGCTCAATGGCGATAAAGCCGAGCAGCGGATGCAACTGGAAACTATTATTGAAGCTTATGAAGAATTTAGCGAGTTCGACACCGCTGAAATCGGACTGATTGAACCTTTACGCGCCATGCGTTTGGTTTATTATCTTGCCTGGCTAATGCGGCGTTGGGCTGATCCcg < 1:552832/250‑1 (MQ=255) | GGTTGGGCGTTATTTAGGGCGTATGCACCAGACGGGGCGCAAACAGCTTTTTATCCATCGCCCGACCATCGGTTTGAACGAATATCTCATTGAGCCACGCAAGCTGTTTGAGGACGCTACACTGATACCTTCCGGGTTGAAAGCGGCATTCCTGAAAGCGACAGATGAGCTGATTGCCGCCGTTACAGCACACTGGCGGGAAGA‑TTTCACCGTTCTGCGGCTACATGGAGACTGCC‑ACGCCGGGAATATTCTCTGGCGC‑GATGGTCCAATGTTTGTTGATCTGGATGATGCACGTAATGGTCCAGCCGTTCAGGATTTGTGGATGTTGCTCAATGGCGATAAAGCCGAGCAGCGGATGCAACTGGAAACTATTATTGAAGCTTATGAAGAATTTAGCGAGTTCGACACCGCTGAAATCGGACTGATTGAACCTTTACGCGCCATGCGTTTGGTTTATTATCTTGCCTGGCTAATGCGGCGTTGGGCTGATCCCG > NZ_CP009273/4036146‑4036639 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |