Read alignment evidence... | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
* | NZ_CP009273 | 3,171,107 | 0 | C | A | 34.7% | 145.5 / 40.7 | 95 | E55* (GAG→TAG) | nudF | ADP‑ribose diphosphatase |
Reads supporting (aligned to +/- strand): ref base C (49/13); new base A (0/33); total (49/46) | |||||||||||
Fisher's exact test for biased strand distribution p-value = 2.69e-15 | |||||||||||
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Rejected as consensus: Frequency below/above cutoff threshold. |
GCCCCCCGGGCTTGCCAGGAAACTTAACACCGGTTTGGTCCGTTTGACTATCAGTCCCGCCTCTTCAATCGCTTCGCGACGGGCAACATCTTCCACACTTTCACCCTCTTCAATCATCCCGGCAACCATCTCCAGTAGCCAAGGGGTTTCGCTGGTGTCGTACGCGGCAATCCGAATCTGCTCAATCAGCACAACTTCATCACGCACTGGGT‑CAAA‑GGGTAGCAAGACTGCGGCGTGACCGCGCTCAAAAATTT‑CCCGCCGCACCTCATGACTCATTTGCCCGTTGAATAGACGATGACGAAATCTATAAAGATCTAATGAAAAAAAGCCGCGATAAAGTGTTTCTCGTGCAATAATTTCTACATCGTTTTTGCCAAATGTAACGGGCAGGTTGTCTGGCTTAAGCATTGTTAATGTCCTGGCACTAATAGTGAATTAAATGTGAATTTCAGCGACGTTTGACTGCCGTTTGAGCAGTCATGTGTTAAATTGAG > NZ_CP009273/3170862‑3171355 | cccccccGGGCTCGCCAGGCACCTCACACCCGGTTGGGCCCGTTTCACTATCACTCCCGCCCCTTCAATCGCTTCGCGACGGGCAACATCTTCCACACTTTCACCCTCTTCAATCATCCCGGCAACCATCTCCAGTAGCCAAGGGGTTTCGCTGGTGTCGTACGCGGCAATCCGAATCTGCTCAATCAGCACAACTTCATCACGCACTGGGT‑CAAA‑GGGTAGCAAGACTGCGGCGTGACCGCGCTCaaaa < 2:705258/249‑1 (MQ=255) ccccccGGTCTTGCCAGGAAACTTACCCCCGTTTTGGCCCGTTTGACTATCAGCCCCGCCTCTTCAATCGCTTCGCGACGGGCAACATCTTCCACACTTTCACCCTCTTCAATCATCCCGGCAACCATCTCCAGTAGCCAAGGGGTTTCGCTGGTGTCGTACGCGGCAATCCGAATCTGCTCAATCAGCACAACTTCATCACGCACTGGGT‑CAAA‑GGGTAGCAAGACTGCGGCGTGACCGCGCTCaaaa < 1:528540/249‑1 (MQ=255) cGGGCTTGCCAGGAAACTTAACACCGGTTTGGTCCGTTTGACTATCAGTCCCGCCTCTTCAATCGCTTCGCGACGGGCAACATCTTCCACACTTTCACCCTCTTCAATCATCCCGGCAACCATCTCCAGTAGCCAAGGGGTTTCGCTGGTGTCGTACGCGGCAATCCGAATCTGCTCAATCAGCACAACTTCATCACGCACTGGGT‑CAAA‑GGGTAGCAAGACTGCGGCGTGACCGCGCTCAAAAATTT‑cc > 1:564214/1‑250 (MQ=255) gggCTTGCCAGGAAACTTAACACCGGTTTGGTCCGTTTGACTATCAGTCCCGCCTCTTCAATCGCTTCGCGACGGGCAACATCTTCCACACTTTCACCCTCTTCAATCATCCCGGCAACCATCTCCAGTAGCCAAGGGGTTTCGCTGGTGTCGTACGCGGCAATCCGAATCTGCTCAATCAGCACAACTTCATCACGCACTGGGT‑CAAA‑GGGTAGCAAGACTGCGGCGTGACCGCGCTCAAAAATTT‑ccc < 1:270473/250‑1 (MQ=255) ggAAACTTAACACCGGTTTGGTCCGTTTGACTATCAGTCCCGCCTCTTCAATCGCTTCGCGACGGGCAACATCTTCCACACTTTCACCCTCTTCAATCATCCCGGCAACCATCTCCAGTAGCCAAGGGGTTTCGCTGGTGTCGTACGCGGCAATCCGAATCTGCTCAATCAGCACAACTTCATCACGCACTGGGT‑CAAA‑GGGTAGCAAGACTGCGGCGTGACCGCGCTCAAAAATTT‑CCCGCCGCACCt > 2:512768/1‑249 (MQ=255) aCTTAACACCGGTTTGGTCCGTTTGACTATCAGTCCCGCCTCTTCAATCGCTTCGCGACGGGCAACATCTTCCACACTTTCACCCTCTTCAATCATCCCGGCAACCATCTCCAGTAGCCAAGGGGTTTCGCTGGTGTCGTACGCGGCAATCCGAATCTGCTCAATCAGCACAACTTCATCACGCACTGGGT‑CAAA‑GGGTAGCAAGACTGCGGCGTGACCGCGCTCAAAAATTT‑CCCGCCGCACCTCATGa > 2:118133/1‑250 (MQ=255) aaCACCGGTTTGGTCCGTTTGACTATCAGTCCCGCCTCTTCAATCGCTTCGCGACGGGCAACATCTTCCACACTTTCACCCTCTTCAATCATCCCGGCAACCATCTCCAGTAGCCAAGGGGTTTCGCTGGTGTCGTACGCGGCAATCCGAATCTGCTCAATCAGCACAACTTCATCACGCACTGGGT‑CAAA‑GGGTAGCAAGACTGCGGCGTGACCGCGCTCCAAAATTT‑CCCGCCGCACCTCATGACTCa > 2:818605/1‑250 (MQ=255) ggTTTGGTCCGTTTGACTATCAGTCCCGCCTCTTCAATCGCTTCGCGACGGGCAACATCTTCCACACTTTCACCCTCTTCAATCATCCCGGCAACCATCTCCAGTAGCCAAGGGGTTTCGCTGGTGTCGTACGCGGCAATCCGAATCTGCTCAATCAGCACAACTTCATCACGCACTGGGT‑CAAA‑GGGTAGCAAGACTGCGGCGTGACCGCGCTCAAAAATTT‑CCCGCCGCACCTCATGACTCATTTGcc > 2:83205/1‑250 (MQ=255) tttGGTCCGTTTGACTATCAGTCCCGCCTCTTCAATCGCTTCGCGACGGGCAACATCTTCCACACTTTCACCCTCTTCAATCATCCCGGCAACCATCTCCAGTAGCCAAGGGGTTTCGCTGGTGTCGTACGCGGCAATCCGAATCTGCTCAATCAGCACAACTTCATCACGCACTGGGT‑CAAA‑GGGTAGCAAGACTGCGGCGTGACCGCGCTCAAAAATTT‑CCCGCCGCACCTCATGACTCATTTGCCCg > 2:434324/1‑250 (MQ=255) ttGGTCCGTTTGACTATCAGTCCCGCCTCTTCAATCGCTTCGCGACGGGCAACATCTTCCACACTTTCACCCTCTTCAATCATCCCGGCAACCATCTCCAGTAGCCAAGGGGTTTCGCTGGTGTCGTACGCGGCAATCCGAATCTGCTCAATCAGCACAACTTCATCACGCACTGGGT‑CAAA‑GGGTAGCAAGACTGCGGCGTGACCGCGCTCAAAAATTT‑CCCGCCGCACCTCATGACTCATTTGCCCGt > 2:79414/1‑250 (MQ=255) tGGTCCGTTTGACTATCAGTCCCGCCTCTTCAATCGCTTCGCGACGGGCAACATCTTCCACACTTTCACCCTCTTCAATCATCCCGGCAACCATCTCCAGTAGCCAAGGGGTTTCGCTGGTGTCGTACGCGGCAATCCGAATCTGCTCAATCAGCACAACTTCATCACGCACTGGGT‑CAAA‑GGGTAGCAAGACTGCGGCGTGACCGCGCTCAAAAATTT‑CCCGCCGCACCTCATGACTCATTTGCCCGtt > 1:478582/1‑250 (MQ=255) gTCCGTTTGACTATCAGTCCCGCCTCTTCAATCGCTTCGCGACGGGCAACATCTTCCACACTTTCACCCTCTTCAATCATCCCGGCAACCATCTCCAGTAGCCAAGGGGTTTCGCTGGTGTCGTACGCGGCAATCCGAATCTGCTCAATCAGCACAACTTCATCACGCACTGGGT‑CAAA‑GGGTAGCAAGACTGCGGCGTGACCGCGCTCAAAAATTT‑CCCGCCGCACCTCATGACTCATTTGCCCGTTg > 2:349661/1‑249 (MQ=255) cGTTTGACTATCAGTCCCGCCTCTTCAATCGCTTCGCGACGGGCAACATCTTCCACACTTTCACCCTCTTCAATCATCCCGGCAACCATCTCCAGTAGCCAAGGGGTTTCGCTGGTGTCGTACGCGGCAATCCGAATCTGCTCAATCAGCACAACTTCATCACGCACTGGGT‑CAAA‑GGGTAGCAAGACTGCGGCGTGACCGCGCTCAAAAATTT‑CCCGCCGCACCTCATGACTCATTTGCCCGTTGaa > 1:796116/1‑248 (MQ=255) gTTTGACTATCAGTCCCGCCTCTTCAATCGCTTCGCGACGGGCAACATCTTCCACACTTTCACCCTCTTCAATCATCCCGGCAACCATCTCCAGTAGCCAAGGGGTTTCGCTGGTGTCGTACGCGGCAATCCGAATCTGCTCAATCAGCACAACTTCATCACGCACTGGGT‑CAAA‑GGGTAGCAAGACTGCGGCGTGACCGCGCTCAAAAATTT‑CCCGCCGCACCTCATGACTCATTTGCCCGTTGaa > 1:162054/1‑247 (MQ=255) gACTATCAGTCCCGCCTCTTCAATCGCTTCGCGACGGGCAACATCTTCCACACTTTCACCCTCTTCAATCATCCCGGCAACCATCTCCAGTAGCCAAGGGGTTTCGCTGGTGTCGTACGCGGCAATCCGAATCTGCTCAATCAGCACAACTTCATCACGCACTGGGT‑CAAA‑GGGTAGCAAGACTGCGGCGTGACCGCGCTCAAAAATTT‑CCCGCCGCACCTCATGACTCATTTGCCCGTTGAATAGACGa > 1:619401/1‑250 (MQ=255) cctcaccgcccccGCCCCTTCAACCGCTTCGCGACGGGCAACATCTCCCACCCCTTCACCCCCTTCAACCACCCCGGCAACCATCTCCAGAAGCCAAGGGGTTCCGCTGGTGTCGTACGCGGCAATCCGAATCTGCTCAACCAGCACACCTCCACCACGCACTGGGT‑CAAG‑GGGTAGCAAGCCTGCGGCGTGACCGCGCTAAAAAATTT‑CCCGCCGCACCTCATGACTCATTTGCCCGTTGAATAGACg < 2:165409/239‑1 (MQ=255) actaccacccccGCCTCTTCAACCGCTTCGCGACGGGCAACATCTTCCACACTTTCCCCCTCTTCAATCACCCCGGCAACCATCTCCAGTAGCCAAGGGGTTTCGCTGGTGTCGTACGCGGCAATCCGAATCTGCTCAATCAGCACAACTTCATCACGCACTGGGT‑CAAA‑GGGTAGCAAGACTGCGGCGTGACCGCGCTCAAAAATTT‑CCCGCCGCACCTCATGACTCATTTGCCCGTTGAATAGACGAt < 1:789205/241‑1 (MQ=255) tATCAGTCCCGCCTCTTCAATCGCTTCGCGACGGGCAACATCTTCCACACTTTCACCCTCTTCAATCATCCCGGCAACCATCTCCAGTAGCCAAGGGGTTTCGCTGGTGTCGTACGCGGCAATCCGAATCTGCTCAATCAGCACAACTTCATCACGCACTGGGT‑CAAA‑GGGTAGCAAGACTGCGGCGTGACCGCGCTCAAAAATTT‑CCCGCCGCACCTCATGACTCATTTGCCCGTTGAATAGACGATGa > 1:435166/1‑250 (MQ=255) atccccccccccTCTTCCATCGCTCCGCGGCGGGCAACATCTCCCACACTTCCACCCTCTACAATCCTCCCGGCACCCATCCCCAGTACCCAGGGGTTTTCGCGGGTGTCGTACGCGGCAATCCGAATCTGCTCAATCAGCACATCTTCATCACGCACTGGGT‑CAAA‑GGGTAGCAAGACTGCGGCGTGACCGCGCTAAAAAATTT‑CCCGCCGCACCTCATGACTCATTTGCCCGTTGAATAGACGATGAc < 2:499450/244‑1 (MQ=255) ctccccccccTCTTCAACCCCTCCGCCGCGTACAACTTCTCCCACACTTCCCCCCTCTCCAACCATCCCGGCACCCCTCTCCAATACCCAGGGGTTTCCGCTGGTGTCGGACGCGGCAACCCGAATCTGCTCAATCAGCACAACTTCACCACGCAGTGGGC‑AAAA‑GGGTAGCAACACTGCGGCGTGCCCGCTCTAAAAAATTT‑CCCGCCGCACCTCATGACTCATTTGCCCGTTGAATAGACGATGACg < 2:409424/245‑1 (MQ=255) ccTCTTCAATCGCTTCGCGACGGGCAACATCTTCCACACTTTCACCCTCTTCAATCATCCCGGCAACCATCTCCAGTAGCCAAGGGGTTTCGCTGGTGTCGTACGCGGCAATCCGAATCTGCTCAATCAGCACAACTTCATCACGCACTGGGT‑CAAA‑GGGTAGCAAGACTGCGGCGTGACCGCGCTCAAAAATTT‑CCCGCCGCACCTCATGACTCATTTGCCCGTTGAATAGACGATGACGAAATCtat > 2:267756/1‑249 (MQ=255) cgcaaaTCGCTCGGCGCCGGGCAACATCTCCCACCCTTCCCCCCTCTTCAAACACCCCGGCAACCATCTCCAGTAGCCAGGGGTTTTCGCTGGTCTCGCACGCGGCAACCCGAATCTGCTCAATCAGCACATCTTCACCCCCCACTGGGT‑CAAA‑GGGGAGCAAGCCTGGGGCGTGACCGCGCTAAAAATTTT‑CCCGCCGCACCTCATGACTCATTTGCCCGTTGAATAGACGATGACGAAATCTATAAAg < 2:177143/246‑1 (MQ=255) tCGCTCCGCGACGGCCAACATCTTCCACACTTTCACCCTCTTCAACCATCCCGGCAACCATCTCCAGTAGCCAAGGGGTTTCGCTGGTGTCGTACGCGGCAATCCGAATCTGCTCAATCAGCACAACTTCATCACGCACTGGGT‑CAAA‑GGGTAGCAAGACTGCGGCGTGACCGCGCTAAAAAATTT‑CCCGCCGCACCTCATGACTCATTTGCCCGTTGAATAGACGATGACGAAATCTATAAAGATCTaa < 1:284204/250‑1 (MQ=255) gCTTCCCGCCGGGCATCTGCTCCTACACCTCCCCCCTCTACATACACCCCGACAACCACCCCCAGTAGCCAGGGGGTGTGGCGGGGTTGGGCCGCGGCAACCAGAATCTTCTCAAACAGCACATCTCCATCCCCCATTGGGT‑CAAA‑GGGGAGAAAGTCTGCGGCGTGCCCGCCCTAAAAAATTC‑CCCGCCGCACCTCATGACTCATTTGCCCGTTGAATAGACGATGACGAAATCTATAAAGATCTAATg < 2:164996/250‑1 (MQ=255) cTTCGCGACGGGCAACATCTTCCACACTTTCACCCTCTTCAATCATCCCGGCAACCATCTCCAGTAGCCAAGGGGTTTCGCTGGTGTCGTACGCGGCAATCCGAATCTGCTCAATCAGCACAACTTCATCACGCACTGGGT‑CAAA‑GGGTAGCAAGACTGCGGCGTGACCGCGCTCAAAAATTT‑CCCGCCGCACCTCATGACTCATTTGCCCGTTGAATAGACGATGACGAAATCTATAAAGATCTAATg > 1:367573/1‑249 (MQ=255) cTTCGCGACGGGCAACATCTTCCACACTTTCACCCTCTTCAATCATCCCGGCAACCATCTCCAGTAGCCAAGGGGTTTCGCTGGTGTCGTACGCGGCAATCCGAATCTGCTCAATCAGCACAACTTCATCACGCACTGGGT‑CAAA‑GGGTAGCAAGACTGCGGCGTGACCGCGCTCAAAAATTT‑CCCGCCGCACCTCATGACTCATTTGCCCGTTGAATAGACGATGACGAAATCTATAAAGATCTAATg > 2:831310/1‑249 (MQ=255) cTTCGCGACGGGCAACATCTTCCACACTTTCACCCTCTTCAATCATCCCGGCAACCATCTCCAGTAGCCAAGGGGTTTCGCTGGTGTCGTACGCGGCAATCCGAATCTGCTCAATCAGCACAACTTCATCACGCACTGGGT‑CAAA‑GGGTAGCAAGACTGCGGCGTGACCGCGCTCAAAAATTT‑CCCGCCGCACCTCATGACTCATTTGCCCGTTGAATAGACGATGACGAAATCTATAAAGATCTAATg > 2:685455/1‑249 (MQ=255) ttCGCGACGGGCAACATCTTCCACACTTTCACCCTCTTCAATCATCCCGGCAACCATCTCCAGTAGCCAAGGGGTTTCGCTGGTGTCGTACGCGGCAATCCGAATCTGCTCAATCAGCACAACTTCATCACGCACTGGGT‑CAAA‑GGGTAGCAAGACTGCGGCGTGACCGCGCTCAAAAATTT‑CCCGCCGCACCTCATGACTCATTTGCCCGTTGAATAGACGATGACGAAATCTATAAAGATCTAATGa > 2:260184/1‑249 (MQ=255) gcgACGGGCAACATCTTCCACACTTTCACCCTCTTCAATCATCCCGGCAACCATCTCCAGTAGCCAAGGGGTTTCGCTGGTGTCGTACGCGGCAATCCGAATCTGCTCAATCAGCACAACTTCATCACGCACTGGGT‑CAAA‑GGGTAGCAAGACTGCGGCGTGACCGCGCTCAAAAATTT‑CCCGCCGCACCTCATGACTCATTTGCCCGTTGAATAGACGATGACGAAATCTATAAAGATCTAATGaaaa > 1:616374/1‑249 (MQ=255) gggCAACATCTCCCACCCTTCCACCCTCTTCAATCATCCCGGCAACCATCCCCAGTAGCCAGGGGGTTTCGCTGGTGTCGTACGCGGCAATCCGAATCTGCTCAATCAGCACAACTTCATCCCGCACTGGGT‑AAAA‑GGGTAGCAAGACGGCGGCGTGCCCGCGCTAAAAAATTT‑CCCGCCGCACCTCATGACTCATTTGCCCGTTGAATAGACGATGACGAAATCTATAAAGATCTAATGAAAAAAAGcc < 1:118133/250‑1 (MQ=255) ggcaaaCATCTCCCCCCCTTCCCCCCCCTCCAAACACCCCGGAAACCACCCCCAGTAGCAAGGGGGTTTCGCTGGTGTCGTCCGCGGCAACCCAATTCTCCCCAATCAGCACAACTCCACCACCCACTGGGT‑AAAA‑GGGAAGCAAGACTGCGGCGTACCCGCGCTAAAAAATTC‑CCCGCCGCACCTCATGACTCATTTGCCCGTTGAATAGACGATGACGAAATCTATAAAGATCTAATGAAAAAAAGcc < 2:359895/246‑1 (MQ=255) gCAACATCTTCCACACTTTCACCCTCTTCAATCATCCCGGCAACCATCTCCAGTAGCCAAGGGGTTTCGCTGGTGTCGTACGCGGCAATCCGAATCTGCTCAATCAGCACAACTTCATCACGCACTGGGT‑CAAA‑GGGTAGCAAGACTGCGGCGTGACCGCGCTCAAAAATTT‑CCCGCCGCACCTCATGACTCATTTGCCCGTTGAATAGACGATGACGAAATCTATAAAGATCTAATGAAAAAAAGCcgc > 2:786060/1‑250 (MQ=255) cAACATCTTCCACACTTTCACCCTCTTCAATCATCCCGGCAACCATCTCCAGTAGCCAAGGGGTTTCGCTGGTGTCGTACGCGGCAATCCGAATCTGCTCAATCAGCACAACTTCATCACGCACTGGGT‑CAAA‑GGGTAGCAAGACTGCGGCGTGACCGCGCTCAAAAATTT‑CCCGCCGCACCTCATGACTCATTTGCCCGTTGAATAGACGATGACGAAATCTATAAAGATCTAATGAAAAAAAGCcgc > 2:44193/1‑249 (MQ=255) cAACATCTTCCACACTTTCACCCTCTTCAATCATCCCGGCAACCATCTCCAGTAGCCAAGGGGTTTCGCTGGTGTCGTACGCGGCAATCCGAATCTGCTCAATCAGCACAACTTCATCACGCACTGGGT‑CAAA‑GGGTAGCAAGACTGCGGCGTGACCGCGCTCAAAAATTT‑CCCGCCGCACCTCATGACTCATTTGCCCGTTGAATAGACGATGACGAAATCTATAAAGATCTAATGAAAAAAAGCcgc > 1:383153/1‑249 (MQ=255) cAACATCTCCCACACTTTCCCCCTCTTCAATCACCCCGGCAACCATCTCCAGTAGCCAAGGGGTTTCGCTGGTGTCGTACGCGGCAATCCAAATCTGCTCAATCAGCACAACTTCACCCCGCACTGGGT‑CAAA‑GGGTAGCAAGACTGCGGCGTGACCGCGCTAAAAAATTT‑CCCGCCGCACCTCATGACTCATTTGCCCGTTGAATAGACGATGACGAAATCTATAAAGATCTAATGAAAAAAAGCcgcg < 1:42224/250‑1 (MQ=255) aaCATCTTCCACACTTTCACCCTCTTCAATCATCCCGGCAACCATCTCCAGTAGCCAAGGGGTTTCGCTGGTGTCGTACGCGGCAATCCGAATCTGCTCAATCAGCACAACTTCATCACGCACTGGGT‑CAAA‑GGGTAGCAAGACTGCGGCGTGACCGCGCTCAAAAATTT‑CCCGCCGCACCTCATGACTCATTTGCCCGTTGAATAGACGATGACGAAATCTATAAAGATCTAATGAAAAAAAGCCGCGa > 1:663045/1‑250 (MQ=255) aaCATCTTCCACACTTTCACCCTCTTCAATCATCCCGGCAACCATCTCCAGTAGCCAAGGGGTTTCGCTGGTGTCGTACGCGGCAATCCGAATCTGCTCAATCAGCACAACTTCATCACGCACTGGGT‑CAAA‑GGGTAGCAAGACTGCGGCGTGACCGCGCTCAAAAATTT‑CCCGCCGCACCTCATGACTCATTTGCCCGTTGAATAGACGATGACGAAATCTATAAAGATCTAATGAAAAAAAGCCGCGa > 2:554755/1‑250 (MQ=255) cacaCTTTCACCCTCTTCAATCATCCCGGCAACCATCTCCAGTAGCCAAGGGGTTTCGCTGGTGTCGTACGCGGCAATCCGAATCTGCTCAATCAGCACAACTTCATCACGCACTGGGT‑CAAA‑GGGTAGCAAGACTGCGGCGTGACCGCGCTCAAAAATTT‑CCCGCCGCACCTCATGACTCATTTGCCCGTTGAATAGACGATGACGAAATCTATAAAGATCTAATGAAAAAAAGCCGCGATAAAGTGtt > 2:641421/1‑250 (MQ=255) acccttccccccTCTTCAACCACCCCGGCACCCATCTCCAGAAGCCAAGGGGTTTCGCTGGTGTCGTACGCGGAAACCCAAATCTGCAAAACCAGCACAACTTCATCACGCACGGGGA‑AAAA‑GGTTAGCAAGACTGCGGCGTGACCGCGCAAAAAAATTT‑CCCGCCGCACCTCATGACTCATTTGCCCGTTGAATAGACGATGACGAAATCTATAAAGATCTAATGAAAAAAAGCCGCGATAAAGTGttt < 2:849417/241‑1 (MQ=255) ccttccccccTCTTCAACCACCCCGGCAACAACCCCCAGTAGCAAGGGGGTTCCGCTGGTGTCGTACGCGGAAACCAGAATCTGCCAAACCACCAAACCTCCACCCCGCACGGGGT‑CAAA‑GGGTAGCAAGACGGCGGCGTGACCGCGCTAAAAATTTC‑CCCGCCGCACCTCATGACTCATTTGCCCGTTGAATAGACGATGACGAAATCTATAAAGATCTAATGAAAAAAAGCCGCGATAAAGTGTTtct < 2:796681/243‑1 (MQ=255) cttcaccccTCTCAAAGCACCCCGGCAACCCGCCCCAGTAGCAAGGGGGTTGCGCTGGTGTCGAACGCGGAAATCCGAATCTGCAAAACCAGCACACCTTCACCCCGCACTGGCT‑AAAG‑GGGTAGCAAGACTGCGGCGGGACCGCGCTAAAAAATTT‑CCCGCCGCACCTCATGACTCATTTGCCCGTTGAATAGACGATGACGAAATCTATAAAGATCTAATGAAAAAAAGCCGCGATAAAGTGTTtctc < 2:853824/244‑1 (MQ=255) tttCACCCTCTTCAATCATCCCGGCAACCATCTCCAGTAGCCAAGGGGTTTCGCTGGTGTCGTACGCGGCAATCCGAATCTGCTCAATCAGCACAACTTCATCACGCACTGGGT‑CAAA‑GGGTAGCAAGACTGCGGCGTGACCGCGCTCAAAAATTT‑CCCGCCGCACCTCATGACTCATTTGCCCGTTGAATAGACGATGACGAAATCTATAAAGATCTAATGAAAAAAAGCCGCGATAAAGTGTTTCTCg > 2:724/1‑250 (MQ=255) cccccTCTACAACCCTCCCGCCAACCATCTCCAGTAGCCAAGGGGTTTCGCTGGTGTCGGCCGCGGCAATCCGATTCTGCCCAAGCAGCACACCTTCACCCCGCACTGGGT‑CAAA‑GGGTAGCAATCCGGCGGGGTGCCCGCGTTAAAAAATTC‑CCCGCCGCACCTCATGACTCATTTGCCCGTTGAATAGACGATGACGAAATCTATAAAGATCTAATGAAAAAAAGCCGCGATAAAGTGTTTCTCGTGc < 2:492195/248‑1 (MQ=255) cccTCTCCAACCACCCCGGCACCCATCTCCAGTAGCCAAGGGTTTCCGCTGGTGTCGTACGCGGCAACCCGAATCTGCTAAATCAGCACACCTTCATCACGCACTGGGT‑CAAA‑GGGTAGCAAGACGGCGGCGTGACCGCGCTAAAAAATTT‑CCCGCCGCACCTCATGACTCATTTGCCCGTTGAATAGACGATGACGAAATCTATAAAGATCTAATGAAAAAAAGCCGCGATAAAGTGTTTCTCGTGCaa < 1:290815/250‑1 (MQ=255) cAATCATCCCGGCAACCATCTCCAGTAGCCAAGGGGTTTCGCTGGTGTCGTACGCGGCAATCCGAATCTGCTCAATCAGCACAACTTCATCACGCACTGGGT‑CAAA‑GGGTAGCAAGACTGCGGCGTGACCGCGCTCAAAAATTT‑CCCGCCGCACCTCATGACTCATTTGCCCGTTGAATAGACGATGACGAAATCTATAAAGATCTAATGAAAAAAAGCCGCGATAAAGTGTTTCTCGTGCAATAATTTc > 2:32689/1‑250 (MQ=255) cccGGCAACCATCCCCAGTAGCCAAGGGGTTTCGCTGGTTTCGTACGCGGCAACCCGAATCTGCTCAATCAGCACAACTTCATCCCGCACTGGGT‑CAAA‑GGGTAGCAAGACTGCGGCGTGACCGCGCTAAAAAATTT‑CCCGCCGCACCTCATGACTCATTTGCCCGTTGAATAGACGATGACGAAATCTATAAAGATCTAATGAAAAAAAGCCGCGATAAAGTGTTTCTCGTGCAATAATTTCTACATCg < 1:216045/250‑1 (MQ=255) cGGCACCCATCCCCAGTAGCCAAGGGGTTTCGCTGGTGTCGTCCGCGGCAATCCGAATCTGCTCAATCAGCACAACTTCATCACGCACTGGGT‑CAAA‑GGGTAGCAAGACTGCGGCGTGACCGCGCTAAAAAATTT‑CCCGCCGCACCTCATGACTCATTTGCCCGTTGAATAGACGATGACGAAATCTATAAAGATCTAATGAAAAAAAGCCGCGATAAAGTGTTTCTCGTGCAATAATTTCTACATCGtt < 1:86389/250‑1 (MQ=255) cAACCATCTCCAGTACCCAGGGGTTTTCGCTGGTGTCGTCCGCGGCAATCCAAATCTGCTCAATCACCACAACTTCATCCCGCACTGGGT‑CAAA‑GGGTAGCAAGACTGCGGCGTGACCGCGCTCAAAAATTT‑CCCGCCGCACCTCATGACTCATTTGCCCGTTGAATAGACGATGACGAAATCTATAAAGATCTAATGAAAAAAAGCCGCGATAAAGTGTTTCTCGTGCAATAATTTCTACATCGttttt < 1:466336/250‑1 (MQ=255) ccAGTAGCCAAGGGGTTTCGCGGGTGTCGTACGCGGCAATCCGAATCTGCTCAATCAGCACAACTTCATCACGCACTGGAT‑CAAA‑GGGTAGCAAGACTGCGGCGTGACCGCGCTAAAAAATTT‑CCCGCCGCACCTCATGACTCATTTGCCCGTTGAATAGACGATGACGAAATCTATAAAGATCTAATGAAAAAAAGCCGCGATAAAGTGTTTCTCGTGCAATAATTTCTACATCGTTTTTGCCAAATGt < 1:135093/250‑1 (MQ=255) catgaGCCAGGGGGTTACGCGGGGGTCGTACGGGGCAACCCAAATCTGCCCAATCAGCACATTTCCACCACGCGCGGGAA‑AAAA‑GGGAAGAAAGACGGCGGCGTGGCCCGGCTAAAAAATTC‑CCCGCCGCACCTCATGACTCATTTGCCCGTTGAATAGACGATGACGAAATCTATAAAGATCTAATGAAAAAAAGCCGCGATAAAGTGTTTCTCGTGCAATAATTTCTACATCGTTTTTGCCAAATg < 2:239548/244‑1 (MQ=255) cAGTAGCCAAGGGGTTTCGCTGGTGTCGTACGCGGCAATCCGAATCTGCTCAATCAGCACAACTTCATCACGCACTGGGT‑CAAA‑GGGTAGCAAGACTGCGGCGTGACCGCGCTCAAAAATTT‑CCCGCCGCACCTCATGACTCATTTGCCCGTTGAATAGACGATGACGAAATCTATAAAGATCTAATGAAAAAAAGCCGCGATAAAGTGTTTCTCGTGCAATAATTTCTACATCGTTTTTGCCAAATGt > 2:812169/1‑249 (MQ=255) gTAGCCAAGGGGTTGCGCTGGGGTCGTACGCGGAAATCCGAATCTGCTCAATCAGCACAACTCCATCACGCACTGGGT‑CAAA‑GGGTAGCAAGACTGCGGCGTGCCCGCGCAAAAAAATTC‑CCCGCCGCACCTCATGACTCATTTGCCCGTTGAATAGACGATGACGAAATCTATAAAGATCTAATGAAAAAAAGCCGCGATAAAGTGTTTCTCGTGCAATAATTTCTACATCGTTTTTGCCAAATGTAAc < 2:389493/250‑1 (MQ=255) aGCCAAGGGGTTTCGCTGGTGTCGTACGCGGCAATCCGAATCTGCTCAATCAGCACAACTTCATCACGCACTGGGT‑CAAA‑GGGTAGCAAGACTGCGGCGTGACCGCGCTCAAAAATTT‑CCCGCCGCACCTCATGACTCATTTGCCCGTTGAATAGACGATGACGAAATCTATAAAGATCTAATGAAAAAAAGCCGCGATAAAGTGTTTCTCGTGCAATAATTTCTACATCGTTTTTGCCAAATGTAACgg > 2:807238/1‑250 (MQ=255) ccAAGGTGTTTCGGTGTTGTCGTCCGCGGCAATCCGAATCTCCTCAACCAGCACAACTTCACCACGCAATGGGT‑CAAA‑GGGAAGCAAGACTGCGGCGTGACCGCGCAAAAAATTTT‑CCCGCCGCACCTCATGACTCATTTGCCCGTTGAATAGACGATGACGAAATCTATAAAGATCTAATGAAAAAAAGCCGCGATAAAGTGTTTCTCGTGCAATAATTTCTACATCGTTTTTGCCAAATGTAACGGGc < 2:437310/250‑1 (MQ=255) ccAAGGGGTTTCGCTGGTGTCGTACGCGGCAATCCGAATCTGCTCAATCAGCACAACTTCATCACGCACTGGGT‑CAAA‑GGGTAGCAAGACGGCGGCGTGACCGCGCTAAAAAATTT‑CCCGCCGCACCTCATGACTCATTTGCCCGTTGAATAGACGATGACGAAATCTATAAAGATCTAATGAAAAAAAGCCGCGATAAAGTGTTTCTCGTGCAATAATTTCTACATCGTTTTTGCCAAATGTAACGGGc < 1:105651/250‑1 (MQ=255) aGGGGTTTCGCTGGTGTCGTACGCGGCAATCCGAATCTGCTCAATCAGCACAACTTCATCACGCACTGGGT‑CAAA‑GGGTAGCAAGACTGCGGCGTGACCGCGCTCAAAAATTT‑CCCGCCGCACCTCATGACTCATTTGCCCGTTGAATAGACGATGACGAAATCTATAAAGATCTAATGAAAAAAAGCCGCGATAAAGTGTTTCTCGTGCAACAATTTCTACATCGTTTTTGCCAAATGTAACGGGCAgg > 1:224194/1‑250 (MQ=255) ccGCTGGTGTCGTACGCGACAATCCGAATCTGCTCAATCAGCACAACTTCACCACGCACGGGGT‑AAAA‑GGGTAGAAAGACTGCGGGGTGACCGCGCTAAAAAATTT‑CCCGCCGCACCTCATGACTCATTTGCCCGTTGAATAGACGATGACGAAATCTATAAAGATCTAATGAAAAAAAGCCGCGATAAAGTGTTTCTCGTGCAATAATTTCTACATCGTTTTTGCCAAATGTAACGGGCAGGTTGTCt < 1:789883/248‑1 (MQ=255) cGCTGGTGTCGTACGCGGCAATCCGAATCTGCTCAATCAGCACAACTTCATCACGCACTGGGT‑CAAA‑GGGTAGCAAGACTGCGGCGTGACCGCGCTCAAAAATTT‑CCCGCCGCACCTCATGACTCATTTGCCCGTTGAATAGACGATGACGAAATCTATAAAGATCTAATGAAAAAAAGCCGCGATAAAGTGTTTCTCGTGCAATAATTTCTACATCGTTTTTGCCAAATGTAACGGGCAGGTTGTCTgg > 1:643288/1‑250 (MQ=255) tGGTGTCCGACGCGACAATCCGAATCTTCTCAACCACCACAACTCCATCCCGCACGGGGT‑CAAA‑GGGTACAAAGCCTGCGGCGTGCCCGCGCAAAAAAATTT‑CCCGCCGCACCTCATGACTCATTTGCCCGTTGAATAGACGATGACGAAATCTATAAAGATCTAATGAAAAAAAGCCGCGATAAAGTGTTTCTCGTGCAATAATTTCTACATCGTTTTTGCCAAATGTAACGGGCAGGTTGTCTGGCtt < 2:478941/250‑1 (MQ=255) gtCGTACGCGGCAATCCGAATCTGCTCAATCAGCACAACTTCATCACGCACTGGGT‑CAAA‑GGGTAGCAAGACTGCGGCGTGACCGCGCTCAAAAATTT‑CCCGCCGCACCTCATGACTCATTTGCCCGTTGAATAGACGATGACGAAATCTATAAAGATCTAATGAAAAAAAGCCGCGATAAAGTGTTTCTCGTGCAATAATTTCTACATCGTTTTTGCCAAATGTAACGGGCAGGTTGTCTGGCTTAAg > 1:844715/1‑249 (MQ=255) tacggtaaaaTCCGAATCTGCTAAAACTGCACAACTACATCCGCCAATGGGC‑CAAA‑GGGTAACAAGACGGCGGCTTACCCGGGTCAAAAAATTT‑CCCGCCGCACCTCATGACTCATTTGCCCGTTGAATAGACGATGACGAAATCTATAAAGATCTAATGAAAAAAAGCCGCGATAAAGTGTTTCTCGTGCAATAATTTCTACATCGTTTTTGCCAAATGTAACGGGCAGGTTGTCTGGCTTAAGCATTg < 2:177244/242‑1 (MQ=255) cgcgGCAATCCGAATCTGCTCAATCAGCACAACTTCATCACGCACTGGGT‑CAAA‑GGGTAGCAAGACTGCGGCGTGACCGCGCTCAAAAATTT‑CCCGCCGCACCTCATGACTCATTTGCCCGTTGAATAGACGATGACGAAATCTATAAAGATCTAATGAAAAAAAGCCGCGATAAAGTGTTTCTCGTGCAATAATTTCTACATCGTTTTTGCCAAATGTAACGGGCAGGTTGTCTGGCTTAAGCATTGt > 2:632912/1‑249 (MQ=255) cgcgGCAATCCAAATCTGCTCAATCAGCACAACTTCATCACGCACTGGGT‑CAAA‑GGGTAGCAAGACTGCGGCGTGACCGCGCTCAAAAATTT‑CCCGCCGCACCTCATGACTCATTTGCCCGTTGAATAGACGATGACGAAATCTATAAAGATCTAATGAAAAAAAGCCGCGATAAAGTGTTTCTCGTGCAATAATTTCTACATCGTTTTTGCCAAATGTAACGGGCAGGTTGTCTGGCTTAAGCATTGtt < 1:48437/250‑1 (MQ=255) cgcgGCAACCCGAATCTCCTCAATCAGCACAACTTCATCACGCACTGGGT‑CAAA‑GGGTAGCAAGACTGCGGCGTGACCGCGCTAAAAAATTT‑CCCGCCGCACCTCATGACTCATTTGCCCGTTGAATAGACGATGACGAAATCTATAAAGATCTAATGAAAAAAAGCCGCGATAAAGTGTTTCTCGTGCAATAATTTCTACATCGTTTTTGCCAAATGTAACGGGCAGGTTGTCTGGCTTAAGCATTGt < 1:837116/249‑1 (MQ=255) cgGCAATCGGAACCTGCTCAATAAGCAAAACTTCACCCCGCACTGGTT‑CAAA‑GGGTAGCAAGACTGGGGCGTGCCCGCGCTAAAAAATTT‑CCCGCCGCACCTCATGACTCATTTGCCCGTTGAATAGACGATGACGAAATCTATAAAGATCTAATGAAAAAAAGCCGCGATAAAGTGTTTCTCGTGCAATAATTTCTACATCGTTTTTGCCAAATGTAACGGGCAGGTTGTCTGGCTTAAGCATTGTTaa < 1:512768/250‑1 (MQ=255) cgGCAACCCGAATCTGCTCAACCAGCACAACTTCACCACGCACTGGGT‑CAAA‑GGGTAGCAAGACTGCGGCGTGACCGCGCTAAAAAATTT‑CCCGCCGCACCTCATGACTCATTTGCCCGTTGAATAGACGATGACGAAATCTATAAAGATCTAATGAAAAAAAGCCGCGATAAAGTGTTTCTCGTGCAATAATTTCTACATCGTTTTTGCCAAATGTAACGGGCAGGTTGTCTGGCTTAAGCATTGTTaa < 1:326612/250‑1 (MQ=255) cgGAAACCCGAACCTGCTAAACCAGCACAACTTCCTCACCCA‑TGGGTACAAA‑GGGTAGCAAGCCTGCGGCGTGACCGCGCTCAAAAATTT‑CCCGCCGCACCTCATGACTCATTTGCCCGTTGAATAGACGATGACGAAATCTATAAAGATCTAATGAAAAAAAGCCGCGATAAAGTGTTTCTCGTGCAATAATTTCTACATCGTTTTTGCCAAATGTAACGGGCAGGTTGTCTGGCTTAAGCATTGTTaa < 2:265866/250‑1 (MQ=255) ggCAATCCGAATCTGCTCAATCAGCACAACTTCATCACGCACTGGGT‑CAAA‑GGGTAGCAAGACTGCGGCGTGACCGCGCTCAAAAATTT‑CCCGCCGCACCTCATGACTCATTTGCCCGTTGAATAGAAGATGACGAAATCTATAAAGATCTAATGAAAAAAAGCCGCGATAAAGTGTTTCTCGTGCAATAATTTCTACATCGTTTTTGCCAAATGTAACGGGCAGGTTGTCTGGCTTAAGCATTGTTAAt > 1:144734/1‑250 (MQ=255) aTCCGAATCTGCTCAATCAGCACAACTTCATCACGCACTGGGT‑CAAA‑GGGTAGCAAGACTGCGGCGTGACCGCGCTCAAAAATTT‑CCCGCCGCACCTCATGACTCATTTGCCCGTTGAATAGACGATGACGAAATCTATAAAGATCTAATGAAAAAAAGCCGCGATAAAGTGTTTCTCGTGCAATAATTTCTACATCGTTTTTGCCAAATGTAACGGGCAGGTTGTCTGGCTTAAGCATTGTTAATGTcc > 2:421133/1‑250 (MQ=255) aTCCGAATCTGCTCAATCAGCACAACTTCATCACGCACTGGGT‑CAAA‑GGGTAGCAAGACTGCGGCGTGACCGCGCTCAAAAATTT‑CCCGCCGCACCTCATGACTCATTTGCCCGTTGAATAGACGATGACGAAATCTATAAAGATCTAATGAAAAAAAGCCGCGATAAAGTGTTTCTCGTGCAATAATTTCTACATCGTTTTTGCCAAATGTAACGGGCAGGTTGTCTGGCTTAAGCATTGTTAATGTcc > 1:174571/1‑250 (MQ=255) aTCCGAATCTGCTCAATCAGCACAACTTCATCACGCACTGGAT‑CAAA‑GGGTAGCAAGACTGCGGCGTGACCGCGCTCAAAAATTT‑CCCGCCGCACCTCATGACTCATTTGCCCGTTGAATAGACGATGACGAAATCTATAAAGATCTAATGAAAAAAAGCCGCGATAAAGTGTTTCTCGTGCAATAATTTCTACATCGTTTTTGCCAAATGTAACGGGCAGGTTGTCTGGCTTAAGCATTGTTAATGTcc < 1:861855/250‑1 (MQ=255) aaTCTGCTCAATCAGCACAACTTCATCACGCACTGGGT‑CAAA‑GGGTAGCAAGACTGCGGCGTGACCGCGCTCAAAAATTT‑CCCGCCGCACCTCATGACTCATTTGCCCGTTGAATAGACGATGACGAAATCTATAAAGATCTAATGAAAAAAAGCCGCGATAAAGTGTTTCTCGTGCAATAATTTCTACATCGTTTTTGCCAAATGTAACGGGCAGGTTGTCTGGCTTAAGCATTGTTAATGTCCTGGCa > 2:193013/1‑250 (MQ=255) tcggcccAACCAGCAAAACTCCACCCCGCACTGGGT‑CAAA‑GGGTAGAACGACTGCGGCGTGCCCGCACAAAAAAATTT‑CCCGCCGCACCTCATGACTCATTTGCCCGTTGAATAGACGATGACGAAATCTATAAAGATCTAATGAAAAAAAGCCGCGATAAAGTGTTTCTCGTGCAATAATTTCTACATCGTTTTTGCCAAATGTAACGGGCAGGTTGTCTGGCTTAAGCATTGTTAATGTCCTGGCACt < 2:661611/244‑1 (MQ=255) cggcaccatcatcACAACTCCAGCCCGCACTGGAT‑AAAA‑GGGTGGCAAGACTGCGGCGGGCCCGCGCTAAAAAATTT‑CCCGCCGCACCTCATGACTCATTTGCCCGTTGAATAGACGATGACGAAATCTATAAAAATCTAATGAAAAAAAGCCGCGATAAAGTGTTTCTCGTGCAATAATTTCTACATCGTTTTTGCCAAATGTAACGGGCAGGTTGTCTGGCGTAAGCATTGTTAATGTCCTGGCACt < 2:401909/242‑1 (MQ=255) cTCAATCAGCACAACTTCATCACGCACTGGGT‑CAAA‑GGGTAGCAAGACTGCGGCGTGACCGCGCTCAAAAATTT‑CCCGCCGCACCTCATGACTCATTTGCCCGTTGAATAGACGATGACGAAATCTATAAAGATCTAATGAAAAAAAGCCGCGATAAAGTGTTTCTCGTGCAATAATTTCTACATCGTTTTTGCCAAATGTAACGGGCAGGTTGTCTGGCTTAAGCATTGTTAATGTCCTGGCACTaa < 1:774826/248‑1 (MQ=255) cAGCACAACTTCATCACGCACTGGGT‑CAAA‑GGGTAGCAAGACTGCGGCGTGACCGCGCTCAAAAATTT‑CCCGCCGCACCTCATGACTCCTTTGCCCGCTGAATAGACGATGACGAATTCTATAAAGATCTAATGAAAAAAAGCCGCGATAAAGTGTTTCTCGTGCAATAATTTCTACATCGTTTTTGCCGAATGTAACGGGCAGGTTGTCTGGCTTAAGCATTGTTAATGTCCTGGCACTATTAGTGAAt > 2:178543/1‑250 (MQ=255) acaACTTCATCACGCACTGGGA‑AAAA‑GGGTAGAAAGACTGCGGCGTGACCGCGCCAAAAAATTC‑CCCGCCGCACCTCATGACTCATTTGCCCGTTGAATAGACGATGACGAAATCTATAAAGATCTAATGAAAAAAAGCCGCGATAAAGTGTTTCTCGTGCAATAATTTCTACATCGTTTTTGCCAAATGTAACGGGCAGGTTGTCTGGCTTAAGCATTGTTAATGTCCTGGCACTAATAGTGAATTaaa < 1:638255/250‑1 (MQ=255) ttCATCACGCACTGGGT‑CAAA‑GGGTAGCAAGACTGCGGCGTGACCGCGCTCAAAAATTT‑CCCGCCGCACCTCATGACTCATTTGCCCGTTGAATAGACGATGACGAAATCTATAAAGATCTAATGAAAAAAAGCCGCGATAAAGTGTTTCTCGTGCAATAATTTCTACATCGTTTTTGCCAAATGTAACGGGCAGGTTGTCTGGCTTAAGCATTGTTAATGTCCTGGCACTAATAGTGAATTAAAtgtg > 1:572899/1‑249 (MQ=255) catcaCGCACTGGGT‑CAAA‑GGGTAGCAAGACTGCGGCGTGACCGCGCTCAAAAATTT‑CCCGCCGCACCTCATGACTCATTTGCCCGTTGAATAGACGATGACGAAATCTATAAAGATCTAATGAAAAAAAGCCGCGATAAAGTGTTTCTCGTGCAATAATTTCTACATCGTTTTTGCCAAATGTAACGGGCAGGTTGTCTGGCTTAAGCATTGTTAATGTCCTGGCACTAATAGTGAATTAAATGTGAAt > 2:751102/1‑250 (MQ=255) catcaCGCACTGGGC‑AAAA‑GGGTAGCAAGACTGCGTCGTGACCGCGTTAAAAAATTT‑CCCGCCGCACCTCATGACTCATTTGCCCGTTGAATAGACGATGACGAAATCTATAAAGATCTAATGAAAAAAAGCCGCGATAAAGTGCTTCTCGTGCAATAATTTCTACATCGTTTTTGCCAAATGTAACGGGCAGGTTGTCTGGCTTAAGCATTGTTAATGTCCTGGCACTAATAGTGAATTAAATGTGAAt < 2:503385/250‑1 (MQ=255) caccaCGCACTGGGT‑CAAA‑GGGTAGCAAGCCGGCGGCGTGACCGCGCTCAAAAATTT‑CCCGCCGCACCTCATGACTCATTTGCCCGTTGAATAGACGATGACGAAATCTATAAAGATCTAATGAAAAAAAGCCGCGATAAAGTGTTTCTCGTGCAATAATTTCTACATCGTTTTTGCCAAATGTAACGGGCAGGTTGTCTGGCTTAAGCATTGTTAATGTCCTGGCACTAATAGTGAATTAAATGTGa < 1:216964/245‑1 (MQ=255) aCGCACTGGGT‑CAAA‑GGGTAGCAAGACTGCGGCGTGACCGCGCTCAAAAATTT‑CCCGCCGCACCTCATGACTCATTTGCCCGTTGAATAGACGATGACGAAATCTATAAAGATCTAATGAAAAAAAGCCGCGATAAAGTGTTTCTCGTGCAATAATTTCTACATCGTTTTTGCCAAATGTAACGGGCAGGTTGTCTGGCTTAAGCATTGTTAATGTCCTGGCACTAATAGTGAATTAAATGTGAAttt > 1:772484/1‑248 (MQ=255) ccacgggT‑CAAAGGGGAAGAAAGACTGCGGCGTACCCGCTATAAAAAATTT‑CCCGCCGCACCTCATGACTCATTTGCCCGTTGAATAGACGATGACGAAATCTATAAAGATCTAATGAAAAAAAGCCGCGATAAAGTGTTTCTCGTGCAATAATTTCTACATCGTTTTTGCCAAATGTAACGGGCAGGTTGTCTGGCTTAAGCATTGTTAATGTCCTGGCACTAATAGTGAATTAAATGTGAATTTCAGc < 2:478582/246‑1 (MQ=255) tGGGT‑CAAA‑GGGTAGCAAGACTGCGGCGTGACCGCGCTCAAAAATTT‑CCCGCCGCACCTCATGACTCATTTGCCCGTTGAATAGACGATGACGAAATCTATAAAGATCTAATGAAAAAAAGCCGCGATAAAGTGTTTCTCGTGCAATAATTTCTACATCGTTTTTGCCAAATGTAACGGGCAGGTTGTCTGGCTTAGGCATTGTTAATGTCCTGGCACTAATAGTGAATTAAATGTGAATTTCAGCGACg > 1:445239/1‑250 (MQ=255) ggTAGCAAGACTGCGGCGTGACCGCGCTCAAAAATTT‑CCCGCCGCACCTCATGACTCATTTGCCCGTTGAATAGACGATGACGAAATCTATAAAGATCTAATGAAAAAAAGCCGCGATAAAGTGTTTCTCGTGCAATAATTTCTACATCGTTTTTGCCAAATGTAACGGGCAGGTTGTCTGGCTTAAGCATTGTTAATGTCCTGGCACTAATAGTGAATTAAATGTGAATTTCAGCGACGTTTGACTGcc > 1:619052/1‑250 (MQ=255) aagctggcggcgTGACCGCGCTCAAAAATTT‑CCCGCCGCACCTCATGACTCATTTGCCCGTTGAATAGACGATGACGAAATCTATAAAGATCTAATGAAAAAAAGCCGCGATAAAGTGTTTCTCGTGCAATAATTTCTACATCGTTTTTGCCAAATGTAACGGGCAGGTTGTCTGGCTTAAGCATTGTTAATGTCCTGGCACTAATAGTGAATTAAATGTGAATTTCAGCGACGTTTGACTGCCGTTTGa < 2:723010/244‑1 (MQ=255) aaGACTGCGGCGTGACCGCGCTCAAAAATTT‑CCCGCCGCACCTCATGACTCATTTGCCCGTTGAATAGACGATGACGAAATCTATAAAGATCTAATGAAAAAAAGCCGCGATAAAGTGTTTCTCGTGCAATAATTTCTACATCGTTTTTGCCAAATGTAACGGGCAGGTTGTCTGGCTTAAGCATTGTTAATGTCCTGGCACTAATAGTGAATTAAATGTGAATTTCAGCGACGTTTGACTGCCGttt > 1:842519/1‑248 (MQ=255) cggcgTGCCCGCGCTCAAAAATTC‑CCCGCCGCACCTCATGACTCATTAGCCCGTTGAATAGACGATGACGAAATCTATAAAGATCTAATGAAAAAAAGCCGCGATAAAGTGTTTCTCGTGCAATAATTTCTACATCGTTTTTGCCAAATGTAACGGGCAGGTTGTCTGGCTTAAGCATTGTTAATGTCCTGGCACTAATAGTGAATTAAATGTGAATTTCAGCGACGTTTGACTGCCGTTTGAGCAGTCa < 1:114975/250‑1 (MQ=255) gTGACCGCGCTCAAAAATTT‑CCCGCCGCACCTCATGACTCATTTGCCCGTTGAATAGACGATGACGAAATCTATAAAGATCTAATGAAAAAAAGCCGCGATAAAGTGTTTCTCGTGCAATAATTTCTACATCGTTTTTGCCAAATGTAACGGGCAGGTTGTCTGGCTTAAGCATTGTTAATGTCCTGGCACTAATAGTGAATTAAATGTGAATTTCAGCGACGTTTGACTGCCGTTTGAGCAGTCAtgtg > 1:778883/1‑250 (MQ=255) tcaccgccacAAAAATTTGCCCGCCGCACCTCATGACTCATTTGCCCGTTGAATAGACGATGACGAAATCTATAAAGATCTAATGAAAAAAAGCCGCGATAAAGTGTTTCTCGTGCAATAATTTCTACATCGTTTTTGCCAAATGTAACGGGCAGGTTGTCTGGCTTAAGCATTGTTAATGTCCTGGCACTAATAGTGAATTAAATGTGAATTTCAGCGACGTTTGACTGCCGTTTGAGCAGTCATgtgt < 2:671359/241‑1 (MQ=255) cccGCACTAAAAATTCC‑CCCGCCGCACCTCATGACTCATTTGCCCGTTGAATAGACGATGACGAAATCTATAAAGATCTAATGAAAAAAAGCCGCGATAAAGTGTTTCTCGTGCAATAATTTCTACATCGTTTTTGCCAAATGTAACGGGCAGGTTGTCTGGCTTAAGCATTGTTAATGTCCTGGCACTAATAGTGAATTAAATGTGAATTTCAGCGACGTTTGACTGCCGTTTGAGCAGTCATGTGTTa < 2:679286/249‑1 (MQ=255) ccGCGCTCAAAAATTT‑CCCGCCGCACCTCATGACTCATTTGCCCGTTGAATAGACGATGACGAAATCTATAAAGATCTAATGAAAAAAAGCCGCGATAAAGTGTTTCTCGTGCAATAATTTCTACATCGTTTTTGCCAAATGTAACGGGCAGGTTGTCTGGCTTAAGCATTGTTAATGTCCTGGCACTAATAGTGAATTAAATGTGAATTTCAGCGACGTTTGACTGCCGTTTGAGCAGTCATGTGTTa > 2:272140/1‑249 (MQ=255) cgcTCAAAAATTT‑CCCGCCGCACCTCATGACTCATTTGCCCGTTGAATAGACGATGACGAAATCTATAAAGATCTAATGAAAAAAAGCCGCGATAAAGTGTTTCTCGTGCAATAATTTCTACATCGTTTTTGCCAAATGTAACGGGCAGGTTGTCTGGCTTAAGCATTGTTAATGTCCTGGCACTAATAGTGAATTAAATGTGAATTTCAGCGACGTTTGACTGCCGTTTGAGCAGTCATGTGTTAAAtt > 2:233749/1‑250 (MQ=255) cgcACAAAATTTT‑CCCGCCGCACCTCATGACTCATTTGCCCGTTGAATAGACGATGACGAAATCTATAAAGATCTAATGAAAAAAAGCCGCGATAAAGTGTTTCTCGTGCAATAATTTCTACATCGTTTTTGCCAAATGTAACGGGCAGGTTGTCTGGCTTAAGCATTGTTAATGTCCTGGCACTAATAGTGAATTAAATGTGAATTTCAGCGACGTTTGACTGCCGTTTGAGCAGTCATGTGTTAAAtt < 2:763051/250‑1 (MQ=255) cTCAAAAATTT‑CCCGCCGCACCTCATGACTCATTTGCCCGTTGAATAGACGATGACGAAATCTATAAAGATCTAATGAAAAAAAGCCGCGATAAAGTGTTTCTCGTGCAATAATTTCTACATCGTTTTTGCCAAATGTAACGGGCAGGTTGTCTGGCTTAAGCATTGTTAATGTCCTGGCACTAATAGTGAATTAAATGTGAATTTCAGCGACGTTTGACTGCCGTTTGAGCAGTCATGTGTTAAAtt > 1:454570/1‑248 (MQ=255) tCAAAAATTT‑CCCGCCGCACCTCATGACTCATTTGCCCGTTGAATAGACGATGACGAAATCTATAAAGATCTAATGAAAAAAAGCCGCGATAAAGTGTTTCTCGTGCAATAATTTCTACATCGTTTTTGCCAAATGTAACGGGCAGGTTGTCTGGCTTAAGCATTGTTAATGTCCTGGCACTAATAGTGAATTAAATGTGAATTTCAGCGACGTTTGACTGCCGTTTGAGCAGTCATGTGTTAAATTGAg > 1:795750/1‑250 (MQ=255) | GCCCCCCGGGCTTGCCAGGAAACTTAACACCGGTTTGGTCCGTTTGACTATCAGTCCCGCCTCTTCAATCGCTTCGCGACGGGCAACATCTTCCACACTTTCACCCTCTTCAATCATCCCGGCAACCATCTCCAGTAGCCAAGGGGTTTCGCTGGTGTCGTACGCGGCAATCCGAATCTGCTCAATCAGCACAACTTCATCACGCACTGGGT‑CAAA‑GGGTAGCAAGACTGCGGCGTGACCGCGCTCAAAAATTT‑CCCGCCGCACCTCATGACTCATTTGCCCGTTGAATAGACGATGACGAAATCTATAAAGATCTAATGAAAAAAAGCCGCGATAAAGTGTTTCTCGTGCAATAATTTCTACATCGTTTTTGCCAAATGTAACGGGCAGGTTGTCTGGCTTAAGCATTGTTAATGTCCTGGCACTAATAGTGAATTAAATGTGAATTTCAGCGACGTTTGACTGCCGTTTGAGCAGTCATGTGTTAAATTGAG > NZ_CP009273/3170862‑3171355 |
Alignment Legend |
---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |