| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NZ_CP009273 | 4,245,997 | 0 | G | C | 37.3% | 134.2 / 27.4 | 67 | P133R (CCG→CGG) | plsB | glycerol‑3‑phosphate 1‑O‑acyltransferase PlsB |
| Reads supporting (aligned to +/- strand): ref base G (15/27); new base C (25/0); total (40/27) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 4.07e-08 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
| Rejected as consensus: Frequency below/above cutoff threshold. | |||||||||||
CCTGACGAGCAGGCAAACGTGGGCCTACGGCAGCCAGACGTTGACGGGCAAAGTGCATACGCGCCACGCGCGCCAGTTTCTGAGCGATAGTTTTATCCGTGCCGTG‑TTCATCCGCCATACGGCGCAGCGAAACTGACGGCGAGAAACGCACAAAACTGTCGCGACCGAGCCACAGTACAGCGAAAAATTTCTGTACGCCGTTAAGCATACGCAGCGGC‑GGGTT‑CACTTCGCCTTTTTCACGCCCCGGCGCGC‑GACCAAACATCACCGACACTGGCACCATCTGCACAT‑CCAGATTTGGGTTGCTACGGTGCAAATCGAGATAGTCG‑TGGAACAGCTTAATAGACTCTTCTTTCGGCGTGTAATAGGTGAACACAC‑GCGGCCCGCCGTGAATGAACACATAGCGCGGCAGTAGCGTGCCGTCGATTTCCAGCGGCTCTAACGGGTCAGGCAAGTCATGTGCCAGACACTGGGCGCGCAACGTCAGCAAATC > NZ_CP009273/4245752‑4246241 | ccTGACGAGCAGGCAAACGTGGGCCTACGGCAGCCAGACGTTGACGGGCAAAGTGCATACGCGCCACGCGCGCCAGTTTCTGAGCGATAGTTTTATCCGTGCCGTG‑TTCATCCGCCATACGGCGCAGCGAAACTGACGGCGAGAAACGCACAAAACTGTCGCGACCGAGCCACAGTACAGCGAAAAATTTCTGTACGCCGTTAAGCATACGCAGCGGC‑GGGTTCCACTTC‑CCTTTTTTACCCCCCCgccc > 2:736452/1‑248 (MQ=255) aCGAGCAGGCAAACGTGGGCCTACGGCAGCCAGACGTTGACGGGCAAAGTGCATACGCGCCACGCGCGCCAGTTTCTGAGCGATAGTTTTATCCGTGCCGTG‑TTCATCCGCCATACGGCGCAGCGAAACTGACGGCGAGAAACGCACAAAACTGTCGCGACCGAGCCACAGTACAGCGAAAAATTTCTGTACGCCGTTAAGCATACGCAGCGGCGGGGTT‑ACCTTCGCTTTTTTC‑CCCCCCGGCGCGC‑Ga > 1:772666/1‑250 (MQ=255) aCGAGCAGGCAAACGTGGGCCTACGGCAGCCAGACGTTGACGGGCAAAGTGCATACGCGCCACGCGCGCCAGTTTCTGAGCGATAGTTTTATCCGTGCCGTG‑TTCATCCGCCATACGGCGCAGCGAAACTGACGGCGAGAAACGCACAAAACTGTCGCGACCGAGCCACAGTACAGCGAAAAATTTCTGTACGCCGTTAAGCATACGCAGCGGC‑GGGGT‑CACTTCGCCTTTTTTACGCCCCcgcgcgc‑gg > 1:115489/1‑249 (MQ=255) aaaCGTGGGCCTACGGCAGCCAGACGTTGACGGGCAAAGTGCATACGCGCCACGCGCGCCAGTTTCTGAGCGATAGTTTTATCCGTGCCGTG‑TTCATCCGCCATACGGCGCAGCGAAACTGACGGCGAGAAACGCACAAAACTGTCGCGACCGAGCCACAGTACAGCGAAAAATTTCTGTACGCCGTTAAGCATCCGCAGCGGC‑GGGGT‑TACTTTGCCCTTTTCTACCCCCCgcgcgccccccaaacaca > 2:284858/1‑238 (MQ=255) aaaCGTGGGCCTACGGCAGCCAGACGTTGACGGGCAAAGTGCATACGCGCCACGCGCGCCAGTTTCTGAGCGATAGTTTTATCCGTGCCGTG‑TTCATCCGCCATACGGCGCAGCGAAACTGACGGCGAGAAACGCACAAAACTGTCGCGACCGAGCCACAGTACAGCGAAAAATTTCTGTACGCCGTTAAGCATACGCAGCGGC‑GGCTT‑TTCTTTGCCCTTTTTACGCCCCCgcacgcccccccacaaca > 1:809826/1‑238 (MQ=255) cAGACGTTGACGGGCAAAGTGCATACGCGCCACGCGCGCCAGTTTCTGAGCGATAGTTTTATCCGTGCCGTG‑TTCATCCGCCATACGGCGCAGCGAAACTGACGGCGAGAAACGCACAAAACTGTCGCGACCGAGCCACAGTACAGCGAAAAATTTCTGTACGCCGTTAAGCATACGCAGCGGC‑GGGTT‑CACTTCGCCTTTTTCACGCCCCGGCGCGC‑GACCAAACATCACCGACACTGGCACCATCTGc < 1:193724/250‑1 (MQ=255) aGACGTTGACGGGCAAAGTGCATACGCGCCACGCGCGCCAGTTTCTGAGCGATAGTTTTATCCGTGCCGTG‑TTCATCCGCCATACGGCGCAGCGAAACTGACGGCGAGAAACGCACAAAACTGTCGCGACCGAGCCACAGTACAGCGAAAAATTTCTGTACGCCGTTAAGCATACGCAGCGGC‑GGGTT‑TCCTTCGCCTTTTTTACCCCCCCGCGCGC‑GGCCAAACATCACCGACCCCGGCCCCCTcccgc > 2:58195/1‑246 (MQ=255) gACGTTGACGGGCAAAGTGCATACGCGCCACGCGCGCCAGTTTCTGAGCGATAGTTTTATCCGTGCCGTG‑TTCATCCGCCATACGGCGCAGCGAAACTGACGGCGAGAAACGCACAAAACTGTCGCGACCGAGCCACAGTACAGCGAAAAATTTCTGTACGCCGTTAAGCATACGCAGCGGC‑GGGGT‑AACTTCCCCTTTTTTACCCCCCCGCGCGC‑GACCCAACACCACCGACACTAGCAccccccgcac > 2:208631/1‑242 (MQ=255) cGTTGGCGGGAAAGGTCCATCCGCGCCACGGGCCCCAGTTTCTGAGCGATAGTTTTATCCGTGCCTTG‑TTCACCCGCCATACGGCGCAGCGAAACTGACGGCGAGAAACGCACAAAACTGTCGCGACCGAGCCACAGTACAGCGAAAAATTTCTGTACGCCGTTAAGCATACGCAGCGGC‑GGGTT‑CACTTCGCCTTTTTCACGCCCCGGCGCGC‑GACCAAACATCACCGACACTGGCACCATCTGCACAt < 2:422171/250‑1 (MQ=255) ttGACGGGCAAAGTGCATACGCGCCACGCGCGCCAGTTTCTGAGCGATAGTTTTATCCGTGCCGTG‑TTCATCCGCCATACCGCGCAGCGAAACTGACGGCGAGAAACGCACAAAACTGTCGCGACCGAGCCACAGTACAGCGAAAAATTTCTGTACGCCGTTAAGCATACGCAGCGGC‑GGGGT‑CACTTCGCCTTTTTCACGCCCCCGCGCGC‑GGCCAAACATCACCGACACTGGCACCATCTGCACAT‑cc > 1:170613/1‑250 (MQ=255) tGACGGGCAAAGTGCATACGCGCCACGCGCGCCAGTTTCTGAGCGATAGTTTTATCCGTGCCGTG‑TTCATCCGCCATACGGCGCAGCGAAACTGACGGCGAGAAACGCACAAAACTGTCGCGACCGAGCCACAGTACAGCGAAAAATTTCTGTACGCCGTTAAGCATACGCAGCGGC‑GGGTT‑CACTTCGCCTTTTTTACGCCCCCGCCCCCGGCCCAAACA‑CACCCACACTGGCCCCCTCCGCACAT‑ccc > 1:560093/1‑249 (MQ=255) ggCAAAGTGCATACGCGCCCCGCGCGCCAGTTTCTGAGCGATAGTTTTATCCGTGCCGTG‑TTCATCCGCCATACGGCGCAGCGAAACTGACGGCGAGAAACGCACAAAACTGTCGCGACCGAGCCACAGTACAGCGAAAAATTTCTGTACGCCGTTAAGCATACGCAGCGGC‑GGGTT‑CACTTCGCCTTTTTCACGCCCCGGCGCGC‑GACCAAACATCACCGACACTGGCACCATCTGCACAT‑CCAGAttt < 1:103618/250‑1 (MQ=255) gCAAAGGGCATACGCGCCACGCGCGCCAGTTTCTGAGCGATAGTTTTATCCGTGCCGTG‑TTCATCCGCCATACGGCGCAGCGAAACTGACGGCGAGAAACGCACAAAACTGTCGCGACCGAGCCACAGTACAGCGAAAAATTTCTGTACGCCGTTAAGCATACGCAGCGGC‑GGGTT‑CACTTCGCCTTTTTCACGCCCCGGCGCGC‑GACCAAACATCACCGACACTGGCACCATCTGCACAT‑CCAGATTTg < 1:223811/250‑1 (MQ=255) aTACGCGCCACGCGCGCCAGTTTCTGAGCGATAGTTTTATCCGTGCCGTG‑TTCATCCGCCATACGGCGCAGCGAAACTGACGGCGAGAAACGCACAAAACTGTCGCGACCGAGCCACAGTACAGCGAAAAATTTCTGTACGCCGTTAAGCATACGCAGCGGC‑GGGTC‑TACATTGCCCTTTTTACCCCCCCGGGCCC‑GCCCAAAAATCACCAACCCCTGCACCATCTGCTCATCCCCGTTTTGGGttct > 1:506803/1‑246 (MQ=255) gcCCCGCGCGCCAGTTTCTGAGCGATAGTTTTACCCGGGCCGTG‑TTCACCCGCCATACGGCGCAGCGAAACTGACGGCGAGAAACGCACAAACCTGTCGCGACCGAGCCACAGTACAGCGAAAAATTTCTGTACGCCGTTAAGCATACGCAGCGGC‑GGGTT‑CACTTCGCCTTTTTCACGCCCCGGCGCGC‑GACCAAACATCACCGACACTGGCACCATCTGCACAT‑CCAGATTTGGGTTGCTACGGTGCa < 1:137869/250‑1 (MQ=255) cACGCGCGCCAGTTTCTGAGCGATAGTTTTATCCGTGCCGTG‑TTCATCCGCCATACGGCGCAGCGAAACTGACGGCGAGAAACGCACAAAACTGTCGCGACCGAGCCACAGTACAGCGAAAAATTTCTGTACGCCGTTAAGCATACGCAGCGGC‑GGGTT‑CACTTCGCCTTTTTTCCCCCCCCGCGCGC‑GCCCCAACATCCCCCACACTTGCACCCTCTGCACAT‑CCCGATTTTTGTTGCTCCGGTGCaaa > 1:87269/1‑250 (MQ=255) aCGCGAGCCAGTTTCTGGGCTATAGTTTTACCCGTGCCGTG‑TTCATCCGCCATACGGCGCAGCGAAACTGACGGCGAGAAACGCACAAAACTGTCGCGACCGAGCCACAGTACAGCGAAAAATTTCTGTACGCCGTTAAGCATACGCAGCGGC‑GGGTT‑CACTTCGCCTTTTTCACGCCCCGGCGCGC‑GACCAAACATCACCGACACTGGCACCATCTGCACAT‑CCAGATTTGGGTTGCTACGGTGCAAAt < 1:431918/250‑1 (MQ=255) cgcgcCAGTTTCTGAGCGATAGTTTTATCCGTGCCGTG‑TTCATCCGCCATACGGCGCAGCGAAACTGACGGCGAGAAACGCACAAAACTGTCGCGACCGAGCCACAGTACAGCGAAAAATTTCTGTACGCCGTTAAGCATACGCAGCGGC‑GGGGT‑TACTTTGCCTTTTTTTCGCCCCCGCGCGC‑GACCAAACAACACCCACACTGGCACCATCTGCACAT‑CCACATTTTGGGTGCTACGGGGCAAATCgc > 1:380363/1‑249 (MQ=255) cgcgcCAGTTCCTGAGCGTTAGTTTTATCCGTGCCGTT‑TCCCCCCGCCATCCGGCGCAGCGAAACTGACGGCGAAAAACGCACAAAACTGTCGCGACCGAGCCACAGTACAGCGAAAAATTTCTGTACGCCGTTAAGCATACGCAGCGGC‑GGGTT‑CACTTCGCCTTTTTCACGCCCCGGCGCGC‑GACCAAACATCACCGACACTGGCACCATCTGCACAT‑CCAGATTTGGGTTGCTACGGTGCAAATCga < 2:68394/250‑1 (MQ=255) gccacAGTTTCGGAGGCGTTGTTTTAACCGGTCCGTGTTTCAGCCACCAGACGGCGCAGCAAAACAGGCGGCGAGAACCACAAAAACCTGTGGCGCCGGAGCCACAGTACAGCGAAAAATTTCTGTACGCCGTTAAGCATACGCAGCGGC‑GGGTT‑CACTTCGCCTTTTTCACGCCCCGGCGCGC‑GACCAAACATCACCGACACTGGCACCATCTGCACAT‑CCAGATTTGGGTTGCTGCGGTGCAAATCga < 2:613546/246‑1 (MQ=255) aGTTTCTGAGCGATATTTTTACCCGTGCCGTG‑TTCACCCGCCATACGGCGCAGCGAAACTGACGGCGAGAAACGCACAAAACTGTCGCGACCGAGCCACAGTACAGCGAAAAATTTCTGTACGCCGTTAAGCATACGCAGCGGC‑GGGTT‑CACTTCGCCTTTTTCACGCCCCGGCGCGC‑GACCAAACATCACCGACACTGGCACCATCTGCACAT‑CCAGATTTGGGTTGCTACGGTGCAAATCGAGATAGt < 1:466471/250‑1 (MQ=255) ttttCGGGGCGTTGGTTTGACCCGTGCCGTG‑TTCACCCGCCATACGGCGCAGCGAAACGGACGGCGAGAAACGCACAAAACTGTCGCGACCGAGCCACAGTACAGCGAAAAATTTCTGTACGCCGTTAAGCATACGCAGCGGC‑GGGTT‑CACTTCGCCTTTTTCACGCCCCGGCGCGC‑GACCAAACATCACCGACACTGGCACCATCTGCACAT‑CCAGATTTGGGTTGCTACGGTGCAAATCGAGATAGTc < 2:721129/249‑1 (MQ=255) ggggCGACAGTTTTACCCGGGCCGTT‑TCTACCCGCCACACGGCGCAGCGAAACGGACGGCGAGAAACCCACAAAACTGTCTCGACCGAGCCACAGTACAGCGAAAAATTTCTGTACGCCTTTAAGCATACGCAGCGGC‑GGGTT‑CACTTCGCCTTTTTCACGCCCCGGCGCGC‑GACCAAACATCACCGACACTGGCACCATCTGCACAT‑CCAGATTTGGGTTGCTACGGTGCAAATCGAGATAGTCG‑TGGa < 2:176726/247‑1 (MQ=255) gAGCGATAGTTTTACCGGTGCCGTG‑TTCATCCGCCATACGGCGCAGCGAAACTGACGGCGAGAAACGCACAAAACTGTCGCGACCGAGCCACAGTACAGCGAAAAATTTCTGTACGCCGTTAAGCATACGCAGCGGC‑GGGTT‑CACTTCGCCTTTTTCACGCCCCGGCGCGC‑GACCAAACATCACCGACACTGGCACCATCTGCACAT‑CCAGATTTGGGTTGCTACGGTGCAAATCGAGATAGTCG‑TGGaa < 1:811385/250‑1 (MQ=255) ggCGATATTTTTACCCGTGCCATG‑TTCATCCGCCAAACGGCGCATCGAAACTGACGGCAAGAAACGCCCAAAACTGTGGCGACCGAGCCACAGTACAGCGAAAAATTTCTGTACGCCGTTAAGCATACGCAGCGGC‑GGGTT‑CACTTCGCCTTTTTCACGCCCCGGCGCGC‑GACCAAACATCACCGACACTGGCACCATCTGCACAT‑CCAGATTTGGGTTGCTACGGTGCAAATCGAGATAGTCG‑TGGAAc < 1:169787/249‑1 (MQ=255) aGCGATAGTTTTATCCGTGCCGTG‑TTCACCCGCCATACGGCGCAGCGAAACTGACGGCGAGAAACGCACAAAACTGTCGCGACCGAGCCACAGTACAGCGAAAAATTTCTGTACGCCGTTAAGCATACGCAGCGGC‑GGGTT‑CACTTCGCCTTTTTCACGCCCCGGCGCGC‑GACCAAACATCACCGACACTGGCACCATCTGCACAT‑CCAGATTTGGGTTGCTACGGTGCAAATCGAGATAGTCG‑TGGa < 1:20486/248‑1 (MQ=255) ggagaGTTTTACCGGGGCCGTG‑TCCACCCGCCAAACGGCGCAGCGAAACTGACGGCGAAAAACGCACAAAACTGTCGCGACCGAGCCACAGTACAGCGAAAAATTTCTGTACGCCGTTAAGCATACGCAGCGGC‑GGGTT‑CACTTCGCCTTTTTCACGCCCCGGCGCGC‑GACCAAACATCACCGACACTGGCACCATCTGCACAT‑CCAGATTTGGGTTGCTACGGTGCAAATCGAGATAGTCG‑TGGAACAg < 2:105784/246‑1 (MQ=255) gATAGTTTTATCCGTGCCGTG‑TTCATCCGCCATACGGCGCAGCGAAACTGACGGCGAGAAACGCACAAAACTGTCGCGACCGAGCCACAGTACAGCGAAAAATTTCTGTACGCCGTTAAGCATACGCAGCGGC‑GGGGT‑CACTTCGCCTTTTTTCCGCCCCCGCGCGC‑GGCCAAACCACACCCACACCGGCCACATCCTCCCCT‑CCCGATTTTGGTTTCTACGGGGCAAAACAAGAATATCG‑TGGGACAGc > 2:763561/1‑250 (MQ=255) aGTTTTATCCGTGCCGTG‑TTCATCCGCCATACGGCGCAGCGAAACTGACGGCGAGAAACGCACAAAACTGTCGCGACCGAGCCACAGTACAGCGAAAAATTTCTGTACGCCGTTAAGCATACGCAGCGGC‑GGGGT‑TCCTTCTCCTTTTTTCCGCCCCCGCGCGC‑GGCCCAACAACCACGCCCCTGGCACCCCCCGCACCT‑CCCCATTTTGGGTGCGTCAGGGCAAAACGGGAGAAGCG‑GGGGACAGCtt > 2:592306/1‑249 (MQ=255) aGTTTTATCCGTGCCGTG‑TTCATCCGCCATACGGCGCAGCGAAACTGACGGCGAGAAACGCACAAAACTGTCGCGACCGAGCCACAGTACAGCGAAAAATTTCTGTACGCCGTTAAGCATACGCAGCGGC‑GGGGT‑CACTTTGCCTTTTTCACGCCCCCGCGCGC‑GACCACACAACACCGACACTTGCCCCCACCGCACAT‑CCCCATTTGGGGTGCTACGGTGCAAATCGAGATAATCG‑TGGAACAGCtt > 2:54512/1‑249 (MQ=255) ttttcccgtgccgtg‑TTCACCCGCCATACGGCGCAGCGAAACTGACGGCGAGAAACGCACAAAACTGTCGCGACCGAGCCACAGTACAGCGAAAAATTTCTGTACGCCGTTAAGCATACGCAGCGGC‑GGGTT‑CACTTCGCCTTTTTCACGCCCCGGCGCGC‑GACCAAACATCACCGACACTGGCACCATCTGCACAT‑CCAGATTTGGGTTGCTACGGTGCAAATCGAGATAGTCG‑TGGAACAGCTTAAt < 2:310296/244‑1 (MQ=255) gtgccgtg‑TTCATCCGCCATACGGCGCAGCGAAACTGACGGCGAGAAACGCACAAAACTGTCGCGACCGAGCCACAGTACAGCGAAAAATTTCTGTACGCCGTTAAGCATACGCAGCGGC‑GGGGT‑TACTTTGCCTTTTTCTCGCCCCCGCGCGC‑GACCAAACACCACACACCCTGGACCCCTCTCCACAT‑CCAGAGTTGGGTGGGTACGGGGCAAATCTAGAGAGTCG‑AGGAAAAGATTAAAAGACtctt > 2:305337/1‑250 (MQ=255) tgccgtg‑TTCATCCGCCATACGGCGCAGCGAAACTGACGGCGAGAAACGCACAAAACTGTCGCGACCGAGCCACAGTACAGCGAAAAATTTCTGTACGCCGTTAAGCATACGCAGCGGC‑GGGGT‑CACTTCGCCTTTTTTACGCCCCGGCGCGC‑GACCAAACATCACCCACACTGGCACCATCTGCACAT‑CCAGATTTGGGTTGCTACGGGGCAAATAGAGATAGTCG‑TGGGACAGCGTTATATACacttc > 2:400240/1‑250 (MQ=255) ccGCCATACGGCGCAGCGAAACTGACGGCGAGAAACGCACAAAACTGTCGCGACCGAGCCACAGTACAGCGAAAAATTTCTGTACGCCGTTAAGCATACGCAGCGGC‑GGGTT‑CACTTCGCCTTTTTCACGCCCCGGCGCGC‑GACCAAACATCACCGACACTGGCACCATCTGCACAT‑CCAGATTTGGGTTGCTACGGTGCAAATCGAGATAGTCG‑TGGAACAGCTTAATAGACTCTTCTTTCGGCGTGTa < 1:765026/250‑1 (MQ=255) cGCCATACGGCGCAGCGAAACTGACGGCGAGAAACGCACAAAACTGTCGCGACCGAGCCACAGTACAGCGAAAAATTTCTGTACGCCGTTAAGCATACGCAGCGGC‑GGGTT‑CACTTCGCCTTTTTCACGCCCCGGCGCGC‑GACCAAACATCACCGACACTGGCACCATCTGCACAT‑CCAGATTTGGGTTGCTACGGTGCAAATCGAGATAGTCG‑TGGAACAGCTTAATAGACTCTTCTTTCGGCGTGTaa < 1:824359/250‑1 (MQ=255) cGCCAAACGGCGCAGCAAAACTGACGGCGAGAAACGCCAAAACCTGCCGCGCCCGAGCCACAGTACAGCGAAAAATTTCTGTACGCCGTTAAGCATACGCAGCGGC‑GGGTT‑CACTTCGCCTTTTTCACGCCCCGGCGCGC‑GACCAAACATCACCGACACTGGCACCATCTGCACAT‑CCAGATTTGGGTTGCTACGGTGCAAATCGAGATAGTCG‑TGGAACAGCTTAATAGACTCTTCTTTCGGCGTGTaa < 2:506803/250‑1 (MQ=255) cATACGGCGCAGCGAAACTGACGGCGAGAAACGCACAAAACTGTCGCGACCGAGCCACAGTACAGCGAAAAATTTCTGTACGCCGTTAAGCATACGCAGCGGC‑GGGTT‑CACTTCGCCTTTTTCACGCCCCGGCGCGC‑GACCAAACATCACCGACACTGGCACCATCTGCACAT‑CCAGATTTGGGTTGCTACGGTGCAAATCGAGATAGTCG‑TGGAACAGCTTAATAGACTCTTCTTTCGGCGTGTAATAg < 1:869423/250‑1 (MQ=255) aTACGGCGCAGCGAAACTGACGGCGAGAAACGCACAAAACTGTCGCGACCGAGCCACAGTACAGCGAAAAATTTCTGTACGCCGTTAAGCATACGCAGCGGC‑GGGTT‑CACTTCGCCTTTTTTACGCCCCCGCGCGC‑GACCAAACATCACCGACACTGGCACCATCTTCACAT‑CCAGATTTTGGGTGCTACGGTGCAAATCGAGATAGTCG‑TGGAAAAGCCTAATAGACTCTTCTTTCGGCGGGTAATAgg > 1:130511/1‑250 (MQ=255) aTACGGCGCAGCGAAACTGACGGCGAGAAACGCACAAAACTGTCGCGACCGAGCCACAGTACAGCGAAAAATTTCTGTACGCCGTTAAGCATACGCAGCGGC‑GGGTT‑CACTTCGCCTTTTTCACGCCCCGGCGCGC‑GACCAAACATCACCGACACTGGCACCATCTGCACAT‑CCAGATTTGGGTTGCTACGGTGCAAATCGAGATAGTCG‑TGGAACAGCTTAATAGACTCTTCTTTCGGCGTGTAATAgg < 1:412317/250‑1 (MQ=255) agggCGCGTCGAAACTGACGGCGAGAAACGCACCAAGCTGTCGCGACAGAGCCACAGTACAGCGAAAAATTTCTGTACGCCGTTAAGCATACGCAGCGGC‑GGGTT‑CACTTCGCCTTTTTCACGCCCCGGCGCGC‑GACCAAACATCACCGACACTGGCACCATCTGCACAT‑CCAGATTTGGGTTGCTACGGTGCAAATCGAGATAGTCG‑TGGAACAGCTTAATAGGCTCTTCTTTCGGCGTGTAATAGGTg < 2:443855/248‑1 (MQ=255) cGGCGCAGCGAAACTGACGGCGAGAAACGCACAAAACTGTCGCGACCGAGCCACAGTACAGCGAAAAATTTCTGTACGCCGTTAAGCATACGCAGCGGC‑GGGTT‑CACTTCGCCTTTTTCACGCCCCGGCGCGC‑GACCAAACATCACCGACACTGGCACCATCTGCACAT‑CCAGATTTGGGTTGCTACGGTGCAAATCGAGATAGTCG‑TGGAACAGCTTAATAGACTCTTCTTTCGGCGTGTAATAGGTg < 2:565921/249‑1 (MQ=255) cgcAGCGAAACTGACGGCGAGAAACGCACAAAACTGTCGCGACCGAGCCACAGTACAGCGAAAAATTTCTGTACGCCGTTAAGCATACGCAGCGGC‑GGGTT‑CACTTCGCCTTTTTCACGCCCCGGCGCGC‑GACCAAACATCACCGACACTGGCACCATCTGCACAT‑CCAGATTTGGGTTGCTACGGTGCAAATCGAGATAGTCG‑TGGAACAGCTTAATAGACTCTTCTTTCGGCGTGTAATAGGTGAaca < 1:686491/250‑1 (MQ=255) gaaGCGAAACTGAAGGCCAAAAGCGCACAAAACTGTCGCGTCCGAGCCGCAGTCCAGCGAAAAATTTCTGTACGCCGTTAAGCATACGCAGCGGC‑GGGTT‑CCCTTCGCCTTTTTCACGCCCCGGCGCGC‑GACCAAACATCACCGACACTGGCACCATCTGCACAT‑CCAGATTTGGGTTGCTACGGTGCAAATCGAGATAGTCG‑TGGAACAGCTTAATAGACTCTTCTTTCGGCGTGTAATAGGTGAacac < 2:41127/248‑1 (MQ=255) gAAACTGACGGCGAGAAACGCACAAAACTGTCGCGACCGAGCCACAGTACAGCGAAAAATTTCTGTACGCCGTTAAGCATACGCAGCGGC‑GGGTT‑CACTTCGCCTTTTTCACGCCCCGGCGCGC‑GACCAAACATCACCGACACTGGCACCATCTGCACAT‑CCAGATTTGGGTTGCTACGGTGCAAATCGAGATAGTCG‑TGGAACAGCTTAATAGACTCTTCTTTCGGCGTGTAATAGGTGAACACAc‑gcg < 2:231737/250‑1 (MQ=255) gAAACTGACGGCGAGAAACGCACAAAACTGTCGCGACCGAGCCACAGTACAGCGAAAAATTTCTGTACGCCGTTAAGCATACGCAGCGGC‑GGGGT‑TCCTTTCCCTTTTTCTCCCCCCCGCGCGC‑CACCCAAACTCACCCCAACCCGCACCACCTCCACAC‑CCACCTTTGGGGTGGCCCCTTGGAAATTCAGATTATCGTTGGAAC‑GCCTTACAGATTCTTCTTTTTGCGGGTAAATGGGGAacacacccc > 2:775736/1‑247 (MQ=255) aaCTGACGGCGAGAAACGCACAAAACTGTCGCGACCGAGCCACAGTACAGCGAAAAATTTCTGTACGCCGTTAAGCATACGCAGCGGC‑GGGGT‑CACTTCGCCTTTTTTACGCCCCCGCGCGC‑GACCAAACATCACCCACACTGGCACCATCTGCACAT‑CCAGATTTTGGGTGCTACGGTGCAAATCGAGATAGTCG‑TGGAACAGCTTAATAGACTCTTCTTTCGGCGTGTAATAAGTGAAAACAC‑GCGGc > 1:368049/1‑250 (MQ=255) gACGGCGAGAAACGCACAAAACTGTCGCGACCGAGCCACAGTACAGCGAAAAATTTCTGTACGCCGTTAAGCATACGCAGCGGC‑GGGTT‑CACTTTGCCTTTTTTACGCCCCCGCGCCC‑GACCCAAAATCACCCCCACTTGCCCCACCCGCCCCT‑CCCCAATTTGGTTGCTACGGGGCAAAACGCGATAATTG‑TGGGAAACCTTAATATACCCCTCTTTTCGCGGGGAAACGGTGAA‑ACACAGCGGCacgc > 2:695925/1‑250 (MQ=255) gCGAGAAACGCACAAAACTGTCGCGACCGAGCCACAGTACAGCGAAAAATTTCTGTACGCCGTTAAGCATACGCAGCGGC‑GGGTT‑TACTTCGCCTTTTTCACGCCCCCGCGCGC‑GACCAAAACTCACCCACACTGGCACCCTCTGCCCAT‑CCAGATTTGGGTTGCTACGGTGCAAATCGAGATAGTCG‑TGGGACAGCTTAATAGACTCTTCTTTCTGCGGGTAATAAGGGAAAACAC‑CCGGcccccccc > 2:374726/1‑247 (MQ=255) cgACCGAGCCACAGTACAGCGAAAAATTTCTGTACGCCGTTAAGCATACGCAGCGGC‑GGGGT‑CACTTTGCCTTTTTTTCGCCCCCGCGCGC‑GACCAAACAACACCGACACTGGCACCATCTTCACAT‑CCAGATTTGGGTTGCTACCGTGCCAATCGAGATAGTCG‑TGGGACAGCTTAATAAACTCTTCTTTCTGCGGGTGATAGGTGAAAACAC‑GCGGGCCCCCCGGAATGAACACAAAGCGAGGCAg > 2:17863/1‑248 (MQ=255) aGCCACAGTACAGCGAAAAATTTCTGTACGCCGTTAAGCATACGCAGCGGC‑GGGGT‑CACTTCGCCTTTTTTACGCCCCCGCGCGC‑GACCAAAAAACACCCCCACCGGCACCATCTGCCCCT‑CCAGAATTGGGGTGCTACCGGGCAAAAAAGGGTAATCG‑TGGGAAAACCTTATAAACACTTCTTTTGGCGTGTTATAGGTGAAAAAAA‑GCGGCCCCCCGTGGATGAACACAAAGCGCGGCAGTAgggggc > 2:90566/1‑245 (MQ=255) ccACAGTACAGCGAAAAATTTCTGTACGCCGTTAAGCATACGCAGCGGC‑GGGTT‑CACTTCGCCTTTTTTACGCCCCGGCGCGC‑GACCAAACATCACCGACACTGGCACCATCTTCACAT‑CCAGATTTGGGTTGCTACGGTGCAAAACGAGATAGTCG‑TGGAACAGCTTAATAGACTCTTCTTTCGGCGTGTAATAGGGGAACACAC‑GCGGCCCGCCGTGAATGAACACATAGCGCGGCAGGAGCGTGCCg > 1:744068/1‑250 (MQ=255) cacaGTACAGCGAAAAATTTCTGTACGCCGTTAAGCATACGCAGCGGC‑GGGGT‑CACTTCGCCTTTTTCTCCCCCCGGCGCGC‑GACCAAACATCACCGACACTGGCACCCTCTTCACAT‑CCAGATTTTGGTTGCTACGGTGCAAAACGAGATAATCG‑GGGGACAGCTTAATAGACTCTTCTTTCGGCGGGTAATAGGTGAACACAC‑CCGGCCCGCCGGGGATGAACACAAAGACCGGCAGGAGCGTGcccg > 2:218957/1‑248 (MQ=255) cGAAAAATTTCTGTACGCCGTTAAGCATACGCAGCGGC‑GGGTT‑CACTTCGCCTTTTTCACGCCCCCGCGCGC‑GACCAAAAATCACCGACACTGGCACCATCTGCACAT‑CCAGATTTTGGTTGCTACGGTGCAAATCGAGATAGTCG‑TGGAACAGCTTAATAGACTCTTCTTTCGGCGTGTAATAGGTGAACACAC‑GCGGCCCGCCGTGAATGAACACATAGCGCGGCAGTAGCGTGCCGTCGATTTCCAg > 1:606115/1‑250 (MQ=255) ttCTGTACGCCGTTAAGCATACGCAGCGGC‑GGGGT‑TACTTCGCCTTTTTTACCCCCCCGCGCGC‑GGCCAAAAATCACCCACACTGGCACCATCTTCACAT‑CCCGATTTTGGGTGCTACGGGGCAAATCGAGAAAATTG‑TGGAAAAGCTTAATAGAATCTTCTTTCGGCGTGTAATAGGTGAACACAC‑GCGGCCCCCCGGGCATGAACACAAAACGGGGGAGGAGGGGGCCGGCGCTTTTCCGCGGccct > 2:747526/1‑249 (MQ=255) tCTGTACGCCGTTAAGCATACGCAGCGGC‑GGGTT‑TACTTCGCCTTTTTTCCGCCCCCGCGCGC‑GACCAAAAAACACCGACACTGGCCCCATCTGCACAT‑CCAGATTTTGGTTGCTACGGTGCAAATCGAGATAGTCG‑TGGAAAAGCTTAATAAACTCTTCTTTTGGCGTGGAATAGGTGAACACAC‑GCGGCCCGCCCTGAAATGACACATAAAGCGGCAGTAGCGTGCCGTCGATGTCCCGCGGCTCTa > 2:626750/1‑249 (MQ=255) cATACGCAGCGGC‑GGGTT‑CACTTCGCCTTTTTCACGCCCCCGCGCGC‑GACCAAACATCACCGACACTGGCACCATCTGCACAT‑CCAGATTTGGGTTGCTACGGTGCAAATCGAGATAGTCG‑TGGAACAGCTTAATAGACTCTTCTTTCGGCGTGTAATAGGTGAACACAC‑GCGGCCCGCCGTGAATGAACACATAGCGCGGCAGTAGCGTGTCGTCGATTTCCAGCGGCTCTAAAGGGTCAGGCAAGTCa > 1:521664/1‑250 (MQ=255) gc‑ggGTT‑CACTGCGCCTTTTCCACCCCCCGGCGCGC‑AACCAAACATCACCGACACTGGCACCATCGGCACAT‑CCAGATTTGGGTTGCTACGGTGCAAATCGAGATAGTCG‑TGGAACAGCTAAATAGACTCTTCTTTCGGCGTGAAATAGGTGAACACAC‑GCGGCCCGCCGTGAATGAACACATAGCGCGGCAGTAGCGTGCCGTCGATTTCCAGCGGCTCTAACGGGTCAGGCAAGTCATGTGCCAGaca < 1:850654/250‑1 (MQ=255) tt‑CACTTCGCCTTTTTCACGCCCCGGCGCGC‑GACCAAACATCACCGACACTGGCACCATCTGCACAT‑CCAGATTTGGGTTGCTACGGTGCAAATCGAGATAGTCG‑TGGAACAGCTTAATAGACTCTTCTTTCGGCGTGTAATAGGTGAACACAC‑GCGGCCCGCCGTGAATGAACACATAGCGCGGCAGTAGCGTGCCGTCGATTTCCAGCGGCTCTAACGGGTCAGGCAAGTCATGGGCCAGACACTggg > 2:786902/1‑250 (MQ=255) cACTTCGCCTTTTTCACGCCCCGGCGCGC‑GACCAAACATCACCGACACTGGCACCATCTGCACAT‑CCAGATTTGGGTTGCTACGGTGCAAATCGAGATAGTCG‑TGGAACAGCTTAATAGACTCTTCTTTCGGCGTGTAATAGGTGAACACAC‑GCGGCCCGCCGTGAATGAACACATAGCGCGGCAGTAGCGTGCCGTCGATTTCCAGCGGCTCTAACGGGTTAGGCAAGTCATGTGCCAGACACTGGgcg > 1:533423/1‑250 (MQ=255) aCTTCGCCTTTTTCACGCCCCGGCGCGC‑GACCAAACATCACCGACACTGGCACCATCTGCACAT‑CCAGATTTGGGTTGCTACGGTGCAAATCGAGATAGTCG‑TGGAACAGCTTAATAGACTCTTCTTTCGGCGTGTAATAGGTGAACACAC‑GCGGCCCGCCGTGAATGAACACATAGCGCGGCAGTAGCGTGCCGTCGATTTCCAGCGGCTCTAACGGGTCAGGCAAGTCATGTGCCAGACACTGGgcgc > 1:566106/1‑250 (MQ=255) cTTCGCCTTTTTCACGCCCCGGCGCGC‑GACCAAACATCACCGACACTGGCACCATCTGCACAT‑CCAGATTTGGGTTGCTACGGTGCAAATCGAGATAGTCG‑TGGAACAGCTTAATAGACTCTTCTTTCGGCGTGTAATAGGTGAACACAC‑GCGGCCCGCCGTGAATGAACACATAGCGCGGCAGTAGCGTGCCGTCGATTTCCAGCGGCTCTAACGGGTCAGGCAAGTCATGTGCCAGACACTGGgcgcg > 2:775236/1‑250 (MQ=255) cGCCTTTTTCACGCCCCGGCGCGC‑GACCAAACATCACCGACACTGGCACCATCTGCACAT‑CCAGATTTGGGTTGCTACGGTGCAAATCGAGATAGTCG‑TGGAACAGCTTAATAGACTCTTCTTTCGGCGTGTAATAGGTGAACACAC‑GCGGCCCGCCGTGAATGAACATATAGCGCGGCAGTAGCGTGCCGTCGATTTCCAGCGGCTCTAACGGGTCAGGCAAGTCATGTGCCAGACACTGGGCGCGCaa > 2:343867/1‑250 (MQ=255) ttttCACGCCCCGGCGCGC‑GACCAAACATCACCGACACTGGCACCATCTGCACAT‑CCAGATTTGGGTTGCTACGGTGCAAATCGAGATAGTCG‑TGGAACAGCTTAATAGACTCTTCTTTCGGCGTGTAATAGGTGAACACAC‑GCGGCCCGCCGTGAATGAACACATAGCGCGGCAGTAGCGTGCCGTCGATTTCCAGCGGCTCTAACGGGTCAGGCAAGTCATGTGCCAGACACTGGGCGCGCAACGt > 1:474071/1‑248 (MQ=255) ttttCACGCCCCGGCGCGC‑GACCAAACATCACCGACACTGGCACCATCTGCACAT‑CCAGATTTGGGTTGCTACGGTGCAAATCGAGATAGTCG‑TGGAACAGCTTAATAGACTCTTCTTTCGGCGTGTAATAGGTGAACACAC‑GCGGCCCGCCGTGAATGAACACATAGCGCGGCAGTAGCGTGCCGTCGATTTCCAGCGGCTCTAACGGGTCAGGCAAGTCATGAGCCAGACACTGGGCGCGCAACGt > 2:612870/1‑248 (MQ=255) tttCACGCCCCGGCGCGC‑GACCAAACATCACCGACACTGGCACCATCTGCACAT‑CCAGATTTGGGTTGCTACGGTGCAAATCGAGATAGTCG‑TGGAACAGCTTAATAGACTCTTCTTTCGGCGTGTAATAGGTGAACACAC‑GCGGCCCGCCGTGAATGAACACATAGCGCGGCAGTAGCGTGCCGTCGATTTCCAGCGGCTCTAACGGGTCAGGCAAGTCATGTGCCAGACACTGGGCGCGCAACGTCAg > 1:1856/1‑250 (MQ=255) aCGCCCCGGCGCGC‑GACCAAACATCACCGACACTGGCACCATCTGCACAT‑CCAGATTTGGGTTGCTACGGTGCAAATCGAGATAGTCG‑TGGAACAGCTTAATAGACTCTTCTTTCGGCGTGTAATAGGTGAACACAC‑GCGGCCCGCCGTGAATGAACACATAGCGCGGCAGTAGCGTGCCGTCGATTTCCAGCGGCTCTAACGGGTCAGGCAAGTCATGTGCCAGACACTGGGCGCGCAACGTCAGCaaa > 2:800449/1‑250 (MQ=255) gCCCCGGCGCGC‑GACCAAACATCACCGACACTGGCACCATCTGCACAT‑CCAGATTTGGGTTGCTACGGTGCAAATCGAGATAGTCG‑TGGAACAGCTTAATAGACTCTTCTTTCGGCGTGTAATAGGTGAACACAC‑GCGGCCCGCCGTGAATGAACACATAGCGCGGCAGTAGCGTGCCGTCGATTTCCAGCGGCTCTAACGGGTCAGGCAAGTCATGTGCCAGACACTGGGCGCGCAACGTCAGCAAATc > 2:623543/1‑250 (MQ=255) gCCCCGGCGCGC‑GACCAAACATCACCGACACTGGCACCATCTGCACAT‑CCAGATTTGGGTTGCTACGGTGCAAATCGAGATAGTCG‑TGGAACAGCTTAATAGACTCTTCTTTCGGCGTGTAATAGGTGAACACAC‑GCGGCCCGCCGTGAATGAACACATAGCGCGGCAGTAGCGTGCCGTCGATTTCCAGCGGCTCTAACGGGTCAGGCAAGTCATGTACCAGACACTGGGCGCGCAACGACAGCAAATc > 2:844430/1‑250 (MQ=255) | CCTGACGAGCAGGCAAACGTGGGCCTACGGCAGCCAGACGTTGACGGGCAAAGTGCATACGCGCCACGCGCGCCAGTTTCTGAGCGATAGTTTTATCCGTGCCGTG‑TTCATCCGCCATACGGCGCAGCGAAACTGACGGCGAGAAACGCACAAAACTGTCGCGACCGAGCCACAGTACAGCGAAAAATTTCTGTACGCCGTTAAGCATACGCAGCGGC‑GGGTT‑CACTTCGCCTTTTTCACGCCCCGGCGCGC‑GACCAAACATCACCGACACTGGCACCATCTGCACAT‑CCAGATTTGGGTTGCTACGGTGCAAATCGAGATAGTCG‑TGGAACAGCTTAATAGACTCTTCTTTCGGCGTGTAATAGGTGAACACAC‑GCGGCCCGCCGTGAATGAACACATAGCGCGGCAGTAGCGTGCCGTCGATTTCCAGCGGCTCTAACGGGTCAGGCAAGTCATGTGCCAGACACTGGGCGCGCAACGTCAGCAAATC > NZ_CP009273/4245752‑4246241 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |