Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NZ_CP0092734,036,3530CT35.7% 45.7 / 10.4 42F193F (TTC→TTTsrkAstress response kinase SrkA
Reads supporting (aligned to +/- strand):  ref base C (17/10);  new base T (15/0);  total (32/10)
Fisher's exact test for biased strand distribution p-value = 7.36e-03
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.91e-01
Rejected as consensus: Frequency below/above cutoff threshold.

GTCGCCAGTTCGAAGCTGATAATATCGATCAGATGGAAGCGGTTGGGCGTTATTTAGGGCGTATGCACCAGACGGGGCGCAAACAGCTTTTTATCCATCGCCCGACCATCGGTTTGAACGAATATCTCATTGAGCCACGCAAGCTGTTTGAGGACGCTACACTGATACCTTCCGGGTTGAAAGCGGCATTCCTGAAAGCGACAGATGAGCTGATTGCCGCCGTTACAGCACACTGGCGGGAAGATTTCACCGTTCTGCGGCTACATGGAGACTGCCACGCCGGGAATATTCTCTGGCGCGATGGTCCAATGTTTGTTGATCTGGATGATGCACGTAATGGTCCAGCCGTTCAGGATTTGTGGATGTTGCTCAATGGCGATAAAGCCGAGCAGCGGATGCAACTGGAAACTATTATTGAAGCTTATGAAGAATTTAGCGAGTTCGACACCGCTGAAATCGGACTGATTGAACCTTTACGCGCCATGCGTTTGG  >  NZ_CP009273/4036106‑4036597
                                                                                                                                                                                                                                                       |                                                                                                                                                                                                                                                       
gtCGCCAGTTCGAAGCTGATAATATCGATCAGATGGAAGCGGTTGGGCGTTATTTAGGGCGTATGCACCAGACGGGGCGCAAACAGCTTTTTATCCATCGCCCGACCATCGGTTTGAACGAATATCTCATTGAGCCACGCAAGCTGTTTGAGGACGCTACACTGATACCTTCCGGGTTGAAAGCGGCATTCCTGAAAGCGACAGATGAGCTGATTGCCGCCGTTACAGCACACTGGCGGGAAGATTTCAc                                                                                                                                                                                                                                                       <  1:824284/250‑1 (MQ=255)
    ccAGTTGGAAACTAGAAATAACGATCGGATGGAGGGGTTTGGGGATTATTAACGGCGAAGTCTCCAGACGGTGCGCAAACGGCTTTCTATCCAGCGCCCGACCATCAGTTAGATCGAATATCTCATTAACCCGCGCAAGCTGTTTGAGGACGCTGCACAGAAACATTCCGGGTTCAAAGGGGCATTCTGGAAGGCGACAGAGGAACTGATTGCCGCCGTTACAGCACACTGGCGGGAAGATTTCACCGtt                                                                                                                                                                                                                                                   <  2:1081291/250‑1 (MQ=255)
    ccAGTTCGAAGCTGATAATATCGATCAGATGGAAGCGGTTGGGCGTTATTTAGGGCGTATGCACCAGACGGGGCGCAAACAGCTTTTTATCCATCGCCCGACCATCGGTTTGAACGAATATCTCATTGAGCCACGCAAGCTGTTTGAGGACGCTACACTGATACCTTCCGGGTTGAAAGCGGCATTCCTGAAAGCGACAGATGAGCTGATTGCCGCCGTTACAGCACACTGGCGGGAAGATTTCACCGtt                                                                                                                                                                                                                                                   <  1:1276274/250‑1 (MQ=255)
                     atatCGATCAGATGGAAGCGGTTGGGCGTTATTTAGGGCGTATGCACCAGACGGGGCGCAAACAGCTTTTTATCCATCGCCCGACCATCGGTTTGAACGAATATCTCATTGAGCCACGCAAGCTGTTTGAGGACGCTACACTGATACCTTCCGGGTTGAAAGCGGCATTCCTGAAAGCGACAGATGAGCTGATTGCCGCCGTTACAGCACACTGGCGGGAAGATTTCCCCCGTCTGCGGCTACATGgaga                                                                                                                                                                                                                                  >  1:1151420/1‑250 (MQ=255)
                         cGATCAGATGGAAGCGGTTGGGCGTTATTTAGGGCGTATGCACCAGACGGGGCGCAAACAGCTTTTTATCCATCGCCCGACCATCGGTTTGAACGAATATCTCATTGAGCCACGCAAGCTGTTTGAGGACGCTACACTGATACCTTCCGGGTTGAAAGCGGCATTCCTGAAAGCGACAGATGAGCTGATTGCCGCCGTTACAGCACACTGGCGGGGAGATTTCACCGTTCCGCGGCTAAAAGgagaacgg                                                                                                                                                                                                                              >  1:352302/1‑246 (MQ=255)
                                 tGGAAGCGGTTGGGCGTTATTTAGGGCGTATGCACCAGACGGGGCGCAAACAGCTTTTTATCCATCGCCCGACCATCGGTTTGAACGAATATCTCATTGAGCCACGCAAGCTGTTTGAGGACGCTACACTGATACCTTCCGGGTTGAAAGCGGCATTCCTGAAAGCGACAGATGAGCTGATTGCCGCCGTTACAGCACACTGGCGGGAAAAAGTCACCACTCTGCGGCCACAAGGAGGCAGCCACGCCgg                                                                                                                                                                                                                      >  2:1184264/1‑250 (MQ=255)
                                       cGGTTGGGCGTTATTTAGGGCGTATGCACCAGACGGGGCGCAAACAGCTTTTTATCCATCGCCCGACCATCGGTTTGAACGAATATCTCATTGAGCCACGCAAGCTGTTTGAGGACGCTACACTGATACCTTCCGGGTTGAAAGCGGCATTCCTGAAAGCGACAGATGAGCTGATTGCCGCCGTTACAGCACACTGGCGGGCAGGTTTTCCCGGTTTGCGGGTAAATGGAGACTTCCACGCCGGGGatat                                                                                                                                                                                                                >  1:669659/1‑250 (MQ=255)
                                       cGGTTGGGCGTTATTTAGGGCGTATGCACCAGACGGGGCGCAAACAGCTTTTTATCCATCGCCCGACCATCGGTTTGAACGAATATCTCATTGAGCCACGCAAGCTGTTTGAGGACGCTACACTGATACCTTCCGGGTTGAAAGCGGCATTCCTGAAAGCGACAGATGAGCTGATTGCCGCCGTTACAGCACACTGGCGGGAAGAGTTCACCGTTCTGCGGCTACATGGGGACTGCCCCGCCGGGGatat                                                                                                                                                                                                                >  1:1346374/1‑250 (MQ=255)
                                         gTTGGGCGTTATTTAGGGCGTATGCACCAGACGGGGCGCAAACAGCTTTTTATCCATCGCCCGACCATCGGTTTGAACGAATATCTCATTGAGCCACGCAAGCTGTTTGAGGACGCTACACTGATACCTTCCGGGTTGAAAGCGGCATTCCTGAAAGCGACAGATGAGCTGATTGCCGCCGTTACAGCACACTGGCGGGGAGATTTCACCCTTCTTCGGCTACATGGAGACTGCCACGCCGGGaggatta                                                                                                                                                                                                              >  1:573218/1‑244 (MQ=255)
                                           tGGGCGTTATTTAGGGCGTATGCACCAGACGGGGCGCAAACAGCTTTTTATCCATCGCCCGACCATCGGTTTGAACGAATATCTCATTGAGCCACGCAAGCTGTTTGAGGACGCTACACTGATACCTTCCGGGTTGAAAGCGGCATTCCTGAAAGCGACAGATGAGCTGATTGCCGCCGTTACAGCACACTGGCGGGAAGATTTCACCGTTCTGCGGCTCCATGGGGACCGCCACGCCGGGAAGATtttc                                                                                                                                                                                                            >  2:96778/1‑250 (MQ=255)
                                           tGGGCGTTATTTAGGGCGTATGCACCAGACGGGGCGCAAACAGCTTTTTATCCATCGCCCGACCATCGGTTTGAACGAATATCTCATTGAGCCACGCAAGCTGTTTGAGGACGCTACACTGATACCTTCCGGGTTGAAAGCGGCATTCCTGAAAGCGACAGATGAGCTGATTGCCGCCGTTACAGCACACTGGCGGGAAGATTTCACCGTTCCCCGGGTACATGGAGACAGCCACGCCGGGGATATtttc                                                                                                                                                                                                            >  1:1308721/1‑250 (MQ=255)
                                             ggCGTTATTTAGGGCGTATGCACCAGACGGGGCGCAAACAGCTTTTTATCCATCGCCCGACCATCGGTTTGAACGAATATCTCATTGAGCCACGCAAGCTGTTTGAGGACGCTACACTGATACCTTCCGGGTTGAAAGCGGCATTCCTGAAAGCGACAGATGAGCTGATTGCCGCCGTTACAGCACACTGGCGGGAAGATTTCACCGTTCTGCGGCTACATGGAGACTGCCACGCCGGGAATATTctct                                                                                                                                                                                                           <  1:1096713/249‑1 (MQ=255)
                                              gCGTTATTTAGGGCGTATGCACCAGACGGGGCGCAAACAGCTTTTTATCCATCGCCCGACCATCGGTTTGAACGAATATCTCATTGAGCCACGCAAGCTGTTTGAGGACGCTACACTGATACCTTCCGGGTTGAAAGCGGCATTCCTGAAAGCGACAGATGAGCTGATTGCCGCCGTTACAGCACACTGGCGGGGAGAATTTACCGGTCTGCGGCTACATGGAGACTGGCAAGCCGGGGATATTctcttg                                                                                                                                                                                                         >  1:525462/1‑248 (MQ=255)
                                                gTTATTTAGGGCGTATGCACCAGACGGGGCGCAAACAGCTTTTTATCCATCGCCCGACCATCGGTTTGAACGAATATCTCATTGAGCCACGCAAGCTGTTTGAGGACGCTACACTGATACCTTCCGGGTTGAAAGCGGCATTCCTGAAAGCGACAGATGAGCTGATTGCCGCCGTTACAGCACACTGGCGGGCAGGTTTCAACGTTTCGCGGCTTCATGGAGACTGTCTCGCCGCGCATTCTCTCTGgcg                                                                                                                                                                                                       >  2:119762/1‑250 (MQ=255)
                                                    tttAGGTCGTATGCACCAGACGGGGCGCAAACAGCTTTTTATCCATCGCCCGACCATCGGTTTGAACGAATATCTCATTGAGCCACGCAAGCTGTTTGAGGACGCTACACTGATACCTTCCGGGTTGAAAGCGGCATTCCTGAAAGCGACAGATGAGCTGATTGCCGCCGTTACAGCACACTGGCGGGAAGATTTCACCGTTCTGCGGCTACATGGAGACTGCCACGCCGGGAATATTCTCTGGCGCGAt                                                                                                                                                                                                   <  2:784150/250‑1 (MQ=255)
                                                      tatggtgTATGCACCAGACGGGGCGCAAACAGCTTTTTATCCATCGCCCGACCATCGGTTTGAACGAATATCTCATTGAGCCACGCAAGCTGTTTGAGGACGCTACACTGATACCTTCCGGGTTGAAAGCGGCATTCCTGAAAGCGACAGATGAGCTGATTGCCGCCGTTACAGCACACTGGCGGGAAGATTTTACACGTCTCTGGCTTCATAGGGACAGCCACGACGGGGATCTTGTCTGGCGGGCTgg                                                                                                                                                                                                 >  1:1182898/7‑250 (MQ=255)
                                                      tAGGGCGTATGCACCAGACGGGGCGCAAACAGCTTTTTATCCATCGCCCGACCATCGGTTTGAACGAATATCTCATTGAGCCACGCAAGCTGTTTGAGGACGCTACACTGATACCTTCCGGGTTGAAAGCGGCATTCCTGAAAGCGACAGATGAGCTGATTGCCGCCGTTACAGCACACTGGCGGGAAGAATTTAACGTTTCTCGGCTACATGGAGACCAGCCCGCCGGGGATATTCTCTGGcgcggttg                                                                                                                                                                                                 >  1:735077/1‑246 (MQ=255)
                                                        gggCGGATGCACCAGACGGGGCGCAAACAGCTTTTTATCCATCGCCCGACCATCGGTTTGAACGAATATCTCATTGAGCCACGCAAGCTGTTTGAGGACGCTACACTGATACCTTCCGGGTTGAAAGCGGCATTCCTGAAAGCGACAGATGAGCTGAATGCCGCCGTTACAGCACACTGGCGGGGAGAGTTCACCGCTATGCGGGCACACGGCGTCACCCACGCCGGGCAACGTCTCTCGCGCGATggat                                                                                                                                                                                               >  2:1393434/1‑248 (MQ=255)
                                                                   ccAGACGGGGCGCAAACAGCTTTTTATCCATCGCCCGACCATCGGTTTGAACGAATATCTCATTGAGCCACGCAAGCTGTTTGAGGACGCTACACTGATACCTTCCGGGTTGAAAGCGGCATTCCTGAAAGCGACAGATGAGCTGATTGCCGCCGTTACAGCACACTGGCGGGAAGATTTCACCGTTCTGCGGCTACATGGAGACTGCCACGCCGGGGATATTTTCTGGCGCGGTGGTCCAAcgtttttt                                                                                                                                                                                    >  1:757905/1‑250 (MQ=255)
                                                                              gcAAACAGCTTTTTATCCATCGCCCGACCATCGGTTTGAACGAATATCTCATTGAGCCACGCAAGCTGTTTGAGGACGCTACACTGATACCTTCCGGGTTGAAAGCGGCATTCCTGAAAGCGACAGATGAGCTGATTGCCGCCGTTACAGCACACTGGCGGGAAGATTTTCTCGGTCTGCGGCCACATGGGGAATGCCACGCCGGGGATAATCTCTGGGGCGATGGTGCAATGTTTGTTGGTCTGggtga                                                                                                                                                                         >  1:1323607/1‑250 (MQ=255)
                                                                                        ttttATCCATCGCCCGACCATCGGTTTGAACGAATATCTCATTGAGCCACGCAAGCTGTTTGAGGACGCTACACTGATACCTTCCGGGTTGAAAGCGGCATTCCTGAAAGCGACAGATGAGCTGATTGCCGCCGTTACAGCACACTGGCGGGAAGATTTTACCGTTCTGCGGCCACCTGGGGACTGCCACGCCGGGGATATTCTCTGGCGCGCTGGGCCAATGTTTGTTGGTCTGGGTGATTCAAGGAAt                                                                                                                                                              >  1:182784/1‑250 (MQ=255)
                                                                                                  cGCCCGACCATCGGTTTGAACGAATATCTCATTGAGCCACGCAAGCTGTTTGAGGACGCTACACTGATACCTTCCGGGTTGAAAGCGGCATTCCTGAAAGCGACAGATGAGCTGATTGCCGCCGTTACAGCACACTGGCGGGAAGATTTTACCGTTCTGCGGGTACAAGGAGACTGCCACGCCGGGGATATTCTCTGGCGCGGTGGGCCCATGTTTTTTGATTTGGGTGATGCACGTAAAGGTCccgccg                                                                                                                                                   >  1:833234/1‑250 (MQ=255)
                                                                                                   ccccAACCATGGGTGTGACCAAATATCTCTTTGGCCCACGAAGGCTGTTTGAGGACGCTACCCTGATCCCTCCCGGGTTGAAAGCGGCATTCCGGAAAGCGACAGATGAGCTGATTGCCGCCGTTACAGCACACTGGCGGGAAGATTTCACCGTTCTGCGGCTACATGGAGACTGCCACGCCGGGAATATTCTCTGGCGCGATGGTCCAATGTTTGTTGATCTGGATGATGCACGTAATGGTCCAGCCGt                                                                                                                                                  <  2:103816/249‑1 (MQ=255)
                                                                                                      cGACCATCGGTTTGAACGAATATCTCATTGAGCCACGCAAGCTGTTTGAGGACGCTACACTGATACCTTCCGGGTTGAAAGCGGCATTCCTGAAAGCGACAGATGAGCTGATTGCCGCCGTTACAGCACACTGGCGGGAAGATTTCACCGTTCTGCGGCTACATGGGGACTGCCACGCCGGGGGAATTTTCTGGCGCGCTGGGTCGCTGTTTTTTGTTCTGGGTGTGGCCCGTAATGGTCTAGCCGtt                                                                                                                                                 >  2:733792/1‑248 (MQ=255)
                                                                                                       gACCATCGGTTTGAACGAATATCTCATTGAGCCACGCAAGCTGTTTGAGGACGCTACACTGATACCTTCCGGGTTGAAAGCGGCATTCCTGAAAGCGACAGATGAGCTGATTGCCGCCGTTACAGCACACTGGCGGGAAGATTTTACCGTTCTGCGGCTACATGGAGACTGCCACGCCGGGGATATTTTCTTGCGCGGTGGTCCCATGTTTGTTGATCTTGATGAAGCCAGTAATGGTCCAACCGTTccg                                                                                                                                              >  1:183979/1‑248 (MQ=255)
                                                                                                         ccATCGGTTTGAACGAATATCTCATTGAGCCACGCAAGCTGTTTGAGGACGCTACACTGATACCTTCCGGGTTGAAAGCGGCATTCCTGAAAGCGACAGATGAGCTGATTGCCGCCGTTACAGCACACTGGCGGGAAGATTTCACCGTTCTGCGGCTACATGGAGACTGCCACGCCGGGAATATTCTCTGGCGCGATGGTCCAATGTTTGTTGATCTGGATGATGCACGTAATGGTCCAGCCGTTCAGGa                                                                                                                                            <  1:1184264/250‑1 (MQ=255)
                                                                                                                         atatCTCATTGAGCCACGCAAGCTGTTTGAGGACGCTACACTGATACCTTCCGGGTTGAAAGCGGCATTCCTGAAAGCGACAGATGAGCTGATTGCCGCCGTTACAGCACACTGGCGGGAAGATTTTACCGGTCTGCGGGCACATGGGGACTGCCCCGCCGGGGATATTCTCTGGCGCGGGGGGCCCATGTTTGTTGATCTGGGTGAAGCACGTAATGGGCCAGGCCGTCTGGATTTGTGGGTGTTGCt                                                                                                                             >  1:775698/1‑249 (MQ=255)
                                                                                                                         atatCTCATTGAGCCACGCAAGCTGTTTGAGGACGCTACACTGATACCTTCCGGGTTGAAAGCGGCATTCCTGAAAGCGACAGATGAGCTGATTGCCGCCGTTACAGCACACTGGCGGGAAGATTTCACCGTTCTGCGGCTACATGGAGACTGCCACGCCGGGAATATTCTCTGGCGCGATGGTCCAATGTTTGTTGATCTGGATGATGCACGTAATGGTCCAGCCGTTCAGGATTTGTGGATGTTGCTc                                                                                                                            <  1:766734/250‑1 (MQ=255)
                                                                                                                                          gCAAGCTGTTTGAGGACGCTACACTGATACCTTCCGGGTTGAAAGCGGCATTCCTGAAAGCGACAGATGAGCTGATTGCCGCCGTTACAGCACACTGGCGGGAAGATTTCACCGTTCTTCGGCGACATGGGGACTGCCACGCCGGGGGAATTTTCTGTCGCGGTGGGCCCCAGGTTTTTTTTCTGGCTGAGGATCGTAATGGTCCCGCCGGTCCGGGTTTTTGGGTGTGGGTCAAAGGGGGTAAAACCgc                                                                                                          >  2:1012040/1‑249 (MQ=255)
                                                                                                                                            aaGCTGTTTGAGGACGCTACACTGATACCTTCCGGGTTGAAAGCGGCATTCCTGAAAGCGACAGATGAGCTGATTGCCGCCGTTACAGCACACTGGCGGGGAGATTTTACCGTTCTGCGGCCACATTGGGAATGCCCCCCCGGGGGTATTTTTTTGCGCCCTGGTCCCAAGTTTTTTTATTTTGGTGAAGCACTCAAATGGTCCCCCCGTCCGGGTTTTTGGGTGTTTGTCCATGGGGGTTAAGCCGggc                                                                                                        >  2:133409/1‑250 (MQ=255)
                                                                                                                                                     gAGGACGCTACACTGATACCTTCCGGGTTGAAAGCGGCATTCCTGAAAGCGACAGATGAGCTGATTGCCGCCGTTACAGCACACTGGCGGGAAGATTTTACCGCTCTGCGGCTACATGGAGGCTGCCACGCCGGGAATATTTTCTGGCGCGCTGGGCCAATGGTTGTTGTGCTGGATGATGTACGTAATGGTGCAGCCGTTCAGGATTTGTGGGTGTTGTTCCATGGCGATAAAACCGAGAAGGGGGTg                                                                                                >  2:677026/1‑249 (MQ=255)
                                                                                                                                                          cGCTACACTGATACCTTCCGGGTTGAAAGCGGCATTCCTGAAAGCGACAGATGAGCTGATTGCCGCCGTTACAGCACACTGGCGGGAAGATTTCACCGTTCTGCGGCTACATGGAGACTGCCCCGCCGGGGATATTCTCTGGCGCGGTGGGCCCATGTTTGTTGATCTGGGTGATGCACGTAATGGTCCCGCCGTTCCGGATTTTTGGGTGGTGCTCAATGGCGATAAAGCCGAGCAGCGGagtcaaatg                                                                                          >  1:835591/1‑242 (MQ=255)
                                                                                                                                                           gCTACACTGATACCTTCCGGGTTGAAAGCGGCATTCCTGAAAGCGACAGATGAGCTGATTGCCGCCGTTACAGCACACTGGCGGGAAGATTTTACCGTTCTGGGGGTACCTGGGGACTTCCCCCCCCGGGATATTTTCTTGCGCGCTGGTCCAATGTTTGTTTGTCTGGGTGATGCCCGTTATGGTCCCGCCGTTCCGGCTTTTTGGGTTTTTGTCCATTGCGGGTAAGCCGAGCCGGGGGTGCGAATgg                                                                                         >  2:897324/1‑250 (MQ=255)
                                                                                                                                                                      aCCTTCCGGGTTGAAAGGGGAATTCCGGAAAGCGACAGAGGAGCGGATTGCCGCCGTTACAGCACACTGGCGGGAAGATTTCACCGTTCTGCGGCTACATGGAGACTGCCACGCCGGGAATATTCTCTGGCGCGATGGTCCAATGTTTGTTGATCTGGATGATGCACGTAATGGTCCAGCCGTTCAGGATTTGTGGATGTTGCTCAATGGCGATAAAGCCGAGCAGCGGATGCAACTGGAAACTattatt                                                                              <  2:672975/250‑1 (MQ=255)
                                                                                                                                                                       ccTTCCGGGTTGAAAGCGGCATTCCTGAAAGCGACAGATGAGCTGATTGCCGCCGTTACAGCACACTGGCGGGAAAAATTCACCCTTCTGCGGCTACATGGAGACTGCCCCCCCGGGGATATTTTCTGGCGCGCTTGTCCAATGTTTTTTTATCTTGTGTATGCCCGTAATGGTCCAGCCGTTCCGGGTTTTTTGTTGTTTGTCCATTGCGGTGAAGACGAGGAACGGGAGCAACTTGAAAATattattt                                                                             >  2:1402908/1‑249 (MQ=255)
                                                                                                                                                                              ggTTGAAAGCGGCATTCCTGAAAGCGACAGATGAGCTGATTGCCGCCGTTACAGCACACTGGCGGGAAGATTTTCCCCCTTTTCGGCTACCTGGAGACTGCCACGCCGGGGATAATTTCTTGCGCGGTCGTGCAATGGTTGGTGGTCTTGGTGATGAACAGAATGGCGGAACCGTTCAGGGTTTGTTGGGGTTGCTCTAAGGGCGTAAAATACAACAGGGGGTGCAACTTGAAAACattatttgaacttt                                                                      >  2:24847/1‑242 (MQ=255)
                                                                                                                                                                                        ggCATTCCTGAAAGCGACAGATGAGCTGATTGCCGCCGTTACAGCACACTGGCGGGAAGATTTCACCGTTCTGCGGCTACATGGAGACTGCCACGCCGGGAATATTCTCTGGCGCGATGGTCCAATGTTTGTTGATCTGGATGATGCACGTAATGGTCCAGCCGTTCAGGATTTGTGGATGTTGCTCAATGGCGATAAAGCCGAGCAGCGGATGCAACTGGAAACTATTATTGAAGCTTATGAAGAAttt                                                            <  1:96778/250‑1 (MQ=255)
                                                                                                                                                                                                      cGACAGATGAGCTGATTGCCGCCGTTACAGCACACTGGCGGGGAGATTTTACCCCTTTGCGGCTACACGGGGACCGCCACGCCCGGGAAATTTTCTGGCGCGGTGGTGCAATGTTTTTTGATCTGGGGGGTGGACGGCAAGGGGCAAGCGCTCCGGAGTTGTGGGTGTTGCTCCATGGGGAGAAAGACCAGCAGGGGGGGGAACTGGGAACTATTCTTGAAGGTTAAGCAGAATTCAggcaggttgggac                                              >  2:1185862/1‑238 (MQ=255)
                                                                                                                                                                                                          aGATGAGCTGATTGCCGCCGTTACAGCACACTGGCGGGAAAATTTTACCGTTCTGCGGGTACATGGAGACTGCCCCCCCGGGGAAATTTTCTTGCGCGGTGGGCCCAAGTTTGTTGGTCTGGGGGGTTCACGGTATTGTCCAGCCGGTTCGGGGTTTGGGGTGTTTCTCAATGGCGGTAAAAGCGCAGAGCGGGTGCCAACGGGAACTTTTTTTTTAGATTTTGAAAAATTTAACGGGTTCGAGACCGcg                                          >  2:199194/1‑249 (MQ=255)
                                                                                                                                                                                                                                          ggCGGGAAGATTTCACCGTTCTGCGGCTACATGGAGACTGCCACGCCGGGAATATTCTCTGGCGCGATGGTCCAATGTTTGTTGATCTGGATGATGCACGTAATGGTCCAGCCGTTCAGGATTTGTGGATGTTGCTCAATGGCGATAAAGCCGAGCAGCGGATGCCACTGGAAACTATTATTGAAGCTTATGAAGAATTTAGCGAGTTCGACACCGCTGAAATCGGACTGATTGAACCTTTACGCGACAt          >  2:675369/1‑250 (MQ=255)
                                                                                                                                                                                                                                               gAAGATTTCACCGTTCTGCGGCTACATGGAGACTGCCACGCCGGGAATATTCTCTGGCGCGATGGTCCAATGTTTGTTGATCTGGATGATGCACGTAATGGTCCAGCCGTTCAGGATTTGTGGATGTTGCTCAATGGCGATAAAGCCGAGCAGCGGATGCAACTGGAAACTATTATTGAAGCTTATGAAGAATTTAGCGAGTTCGACACCGCTGAAATCGGACTGATTGAACCTTTACGCGCCATGCGtt     >  2:123247/1‑250 (MQ=255)
                                                                                                                                                                                                                                                  gATTTCACCGTTCTGCGGCTACATGGAGACTGCCACGCCGGGAATATTCTCTGGCGCGATGGTCCAATGTTTGTTGATCTGGATGATGCACGTAATGGTCCAGCCGTTCAGGATTTGTGGATGTTGCTCAATGGCGATAAAGCCGAGCAGCGGATGCAACTGGAAACTATTATTGAAGCTTATGAAGAATTTAGCGAGTTCGACACCGCTGAAATCGGACTGATTGAACCTTTACGCGCCATGCGTTTgg  >  2:492543/1‑250 (MQ=255)
                                                                                                                                                                                                                                                       |                                                                                                                                                                                                                                                       
GTCGCCAGTTCGAAGCTGATAATATCGATCAGATGGAAGCGGTTGGGCGTTATTTAGGGCGTATGCACCAGACGGGGCGCAAACAGCTTTTTATCCATCGCCCGACCATCGGTTTGAACGAATATCTCATTGAGCCACGCAAGCTGTTTGAGGACGCTACACTGATACCTTCCGGGTTGAAAGCGGCATTCCTGAAAGCGACAGATGAGCTGATTGCCGCCGTTACAGCACACTGGCGGGAAGATTTCACCGTTCTGCGGCTACATGGAGACTGCCACGCCGGGAATATTCTCTGGCGCGATGGTCCAATGTTTGTTGATCTGGATGATGCACGTAATGGTCCAGCCGTTCAGGATTTGTGGATGTTGCTCAATGGCGATAAAGCCGAGCAGCGGATGCAACTGGAAACTATTATTGAAGCTTATGAAGAATTTAGCGAGTTCGACACCGCTGAAATCGGACTGATTGAACCTTTACGCGCCATGCGTTTGG  >  NZ_CP009273/4036106‑4036597

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 26 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: