Read alignment evidence... | |||||||||||
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seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
* | NZ_CP009273 | 284,093 | 0 | A | C | 42.4% | 71.5 / 16.6 | 59 | T532P (ACC→CCC) | yagH | glycoside hydrolase family 43 protein |
Reads supporting (aligned to +/- strand): ref base A (18/16); new base C (0/25); total (18/41) | |||||||||||
Fisher's exact test for biased strand distribution p-value = 5.23e-06 | |||||||||||
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Rejected as consensus: Frequency below/above cutoff threshold. |
GCCCATTCCGGTGCCGGAACATGCGGAGAGCGTCTGGCTGCGGGTGGACGT‑GGATACGCTGGTCTACCGCTACAGCTACTCGTTTGATGGCGAGACGTGGCACACCGTGCCGGTGACGTATGAGGCGTGGAAGCTGTCGGACGACTACATCGGCGGGCGCGGCTTCTTCACCGGCGCGTTTGTGGGCCTGCACTGCGAGGACATCAGCGGCGACGGCTGCTACGCGGACTTCGACTACTTCACCTACGAGCCGGTCTAACGGCTCAGGCCGGGTAGCCCAGCGCGCGCGAGAGCGCGAGCCCGGCCTGCTGAAGCTGCTCGCGGAAATTAGCCAGCTCCGCGTCGTCCACGCGGGAGGTCAGCGTCGACAGGCTCAGGGCGGCGATGACGCGGGACTCGTGGTTCCACACCGGCACCGCCACGCAGCGCACGCCCTGCTCGTTCTCTTCGCTGTCCAGGGCGTAGCCTTGCTCGCGGGTCTGCGCCAGG > NZ_CP009273/283852‑284340 | gcCCATTCCGGTGCCGGAACATGCGGAGAGCGTCTGGCTGCGGGTGGACGT‑GGATACGCTGGTCTACCGCTACAGCTACTCGTTTGATGGCGAGACGTGGCACACCGTGCCGGTGACGTATGAGGCGTGGAAGCTGTCGGACGACTACATCGGCGGGCGCGGCTTCTTCACCGGCGCGTTTGTGGGCCTGCACTGCGAGGACATCAGCGGCGACGGCTGCTACGCGGACTTCGACTACTTCACCTACGAg < 1:552377/250‑1 (MQ=255) aTTCCGGTGCCGGAACATGCGGAGAGCGTCTGGCTGCGGGTGGACGT‑GGATACGCTGGTCTACCGCTACAGCTACTCGTTTGATGGCGAGACGTGGCACACCGTGCCGGTGACGTATGAGGCGTGGAAGCTGTCGGACGACTACATCGGCGGGCGCGGCTTCTTCACCGGCGCGTTTGTGGGCCTGCACTGCGAGGACATCAGCGGCGACGGCTGCTACGCGGACTTCGACTACTTCACCTACGAGCCgg < 1:207614/250‑1 (MQ=255) ccGGTGCCGGACCATGCGGAGAGCGTCTGCCTGCGGGGGGACGT‑GGATACGCTGGTCTACCGCTCCAGCTACTCGTTTGATGGCGGGACGTGGCACGCCGTGCCGGTGACGTATGAGGCGTGGAGGCTGTCGGACGACTACCTCGGCGGGCGCGGCTTCTTCACCGGCGCGTTTGTGGGCCTGCACTGCGAGGACATCGGCGGCGACGGCTGCTACGCGGACTTCGACTACTTCACCTACGAGCCGGTc < 2:265014/249‑1 (MQ=255) atgagCGTGTGGCGGGGGGTGGGCGT‑GGCTGCGCTGGTCTACCGCTCCGGCTACCCTTTTGATGGGGAGGGGGGGCCCACCGGGCCGGTGACGTATGGGGCGTGGAAGCGGGCGGACGACTACAGCGGCGGGCCCGTCTTCTCCCCCGGCGCGTTTGTGGGCCTGCCCTGCGAGGACTCCGGCGGCGACGGCGGCTACGCGGTCTTCGCCTCCTTCACCTACGAGCCGGTCTAACGGCTCAGGCCGGGTa < 2:797173/248‑1 (MQ=255) cGTTTGGCGGGGGGTGGACGT‑GGATACCTTGGTCTACCGCTACAGCTGCGCGTTTGATGGCGAGACGTGGCCCACCGTGCCGGTGACGTAGGAGGCGTGGAAGCTGTCGGACGACTACATCGGCGGGCGCGGCTTCTTCCCCGGCGCGTTTGTGGGCCTGCACTGCGAGGACATCAGCGGCGACGGCTGCTACGCGGACTTCGACTACTTCCCCTACGAGCCGGTCTAACGGCTCAGGCCGGGTAGCCCa < 2:16656/250‑1 (MQ=255) gCTGGGGGTGGACGG‑GGATACGCTGGTCTACCGCTACAGCTACTCGTTTGATGGCGAGACGTGGCACACCGTGCCGGTGACGTATGAGGCGTGGAAGCTGTCGGACGACTCCACCGGCGGGCGCGGCTTCTTCACCGGCGCGTTTGGGGGCCTGCACTGCGAGGACATCAGCGGCGACGGCTGCTACGCGGACTTCGACTACTTTCCCTACGAGCCGGTCTAACGGCTCAGGCCGGGTAGCCCAgcgcgc < 2:632717/250‑1 (MQ=255) ggCGGGTGG‑CGTGGGATACGCTGGTCTACGGCTACGGCGACTCGTTTGATGGCGAAACGTGGCCACCCGTGCCGGTTGCGTATGGGGCGTGGAAGCTGCCGGAGGACTACACCGGCGGGCGCGGCTTCTCCCCCGGCGCGTTTGTGGGCCTGCACTGCGAGCACATCGGCGGCGAGGGCTGCTACGCGGACTTCGACTGCTTCACCTACGAGCCGGTCTAACGGCTCAGGCCGGGTAGCCCAgcgcgcgc < 2:646006/249‑1 (MQ=255) gCGGGGGGACGG‑GGATCCGCGGGTCTACCGCTACAGCTACTCGTTGGAGGGCGAGACGTGGCACCCCGTGCCGGTGACGTATGAGGCGTGGAAGCTGCCGGCCGACTACATCGGCGGGCGCGGCTTCTTCACCGGCGCGTTTGTGGGCCTGCACTGCGAGGACATCAGCGGCGACGGCTGCTACGCGGACTTCGACTACTCCCCCTACGAGCCGGTCTAACGGCTCAGGCCGGGTAGCCCAGcgcgcgcg < 2:381443/250‑1 (MQ=255) ggACGT‑GGATACGCTGGTCTACCGCTACAGCTACTCGTTTGATGGCGAGACGTGGCACACCGTGCCGGTGACGTATGAGGCGTGGAAGCTGTCGGACGACTACATCGGCGGGCGCGGCTTCTTCACCGGCGCGTTTGTGGGCCTGCACTGCGAGGACATCAGCGGCGACGGCTGCTACGCGGACTTCGACTACTTCACCTACGAGCCGGTCTAACGGCTCAGGCCGGGTAGCCCAGCGCGCGCGAGAgcg < 1:229003/250‑1 (MQ=255) aCGG‑GGATACGCTGGTCTCCCGCTCCAGCTCCTCGTTTGATGCCGAGACGTGGCACCCCGGGCCGGTGACGTATGAGGCGTGGAGGCTGTCGGACGACTACACCGGCGGGCGCGGCTTCTCCCCCGGCGCGTTTGTGGGCCTGCCCTGCGAGGACATCAGCGGCGACGGCTGCTACGCGGCCTTCGACTCCTTCCCCTCCGAGCCGGTCTAACGGCTCAGGCCGGGTAGCCCAGCGCGCGCGAGAGcgcg < 2:196332/250‑1 (MQ=255) tACGCGGGTCTCCCCCTGCAGCTACGGGTTGGAGGGGGCGCGGTGGCGCACGCGGCCGGGGCCGTATGAGGGGTGAAGGCTGTCGGACGCCTACATCGGGGGGCGCGGCTTTTTCACCGGCGCGTTTGTGGGCCTGCAGTACGGGGCCATCGGGGGGGAGGGCGGCTACGCGAACTCCGCCTACTCCCCCTACGAGCCGGTCTAACGGCTCAGGCCGGGTAGCCCAGCGCGCGCGAGAGCGCGAGCCCgg < 2:234790/250‑1 (MQ=255) cGCTGGTCTACCGTTACAGCTCCTCGTTTGATGGCGAGCCGTGGCACACCGTGCCGGTGACGTATGAGGCGTGGAAGCTGTCGGACGACTACATCGGCGGGCGCGGCTTCTTCACCGGCGCGTTTGTGGGCCTGCACTGCGAGGACATCAGCGGCGACGGCTGCTACGCGGACTTCGACTACTTCCCCTACGAGCCGGTCTAACGGCTCAGGCCGGGTAGCCCAGCGCGCGCGAGAGCGCGAGCCCGGcc < 1:834459/250‑1 (MQ=255) cTACAGCTACTCGTTTGATGGCGAGACGTGGCACACCGTGCCGGTGACGTATGAGGCGTGGAAGCTGTCGGACGACTACATCGGCGGGCGCGGCTTCTTCACCGGCGCTTTTGTGGGCCTGCACTGCGAGGACATCAGCGGCGACGGCTGCTACGCGGACTTCGACTACTTCACCTACGAGCCGGTCTAACGGCTCAGGCCGGGTAGCCCAGCGCGCGCGAGAGCGCGAGCCCGGCCTGCTGAAgctgct < 1:459840/250‑1 (MQ=255) acgcggttGATGGAGAGCGGTGGCACACCGTGCGGGTGAGTTATCGGGGTTGGACGCGGTCGGACGCCTACACCGGCGGGCACGGCTCCTTCCCCGGCGCTTTGGGGGGCTTGCGCTGCGAGCACATCAGGGGCAACGGCTGCTACGCGGAATTCGTCTCCTACCCCGAGGAGCCGGTCTAACGGCTCAGGCCGGGTAGCCCAGCGCGAGCGAGAGCGCGAGCCCGGCCTGCTGAAGCTGCTCGCGGaaa < 2:148310/244‑1 (MQ=255) gggggtgagtgggCACACCGTGCGGGGGCGGTTGGAGGGGTGGAAGCTGGCGTACGCCTCCTGCGGGGGGCGGGGTTTCTTCCCCGGCGCGTTTGTGGGCCTGCACTGGGAGAACATCAGCGGCGACGGCTGCTCCGCGGCCTGCGACTTCTTCCCCTACGAGCCGGTCTAACGGCTCAGGCCGGGTAGCCCAGCGCGCGCGAGAGCGCGAGCCCGGCCTGCTGAAGCTGCTCGCGGAAATTAGCCAGCt < 2:558484/239‑1 (MQ=255) gggggaggTGGCCCCCGGTGCCGGTGAGGTGTGGGGCGTGGAGGCTGGCGGACGCCTACTGGGGCGGGCGCGCTTTCTTCCCCGGCGCGTTTGGGGGCCTGCACTGCGAGGACATCGGGGGCGACGGCTGCTACGCGGACTTCGCCTACTTCCCCTACGAGCCGGTCTAACGGCTCAGGCCGGGTAGCCCAGCGCGCGCGAGAGCGCGAGCCCGGCCTGCTGAAGCTGCTCGCGGAAATTAGCCAGCTcc < 2:741483/243‑1 (MQ=255) cGTATGGGGCGTGGAAGCTGTCGGACGACTACATCGGCGGGCGCGGCTTCTTCACCGGCGCGTTTGTGGGCCTGCACTGCGAGGACATCAGCGGCGACGGCTGCTACGCGGACTTCGACTACTTCACCTACGAGCCGGTCTAACGGCTCAGGCCGGGTAGCCCAGCGCGCGCGAGAGCGCGAGCCCGGCCTGCTGAAGCTGCTCGCGGAAATTAGCCAGCTCCGCGTCGTCCACGCGGGAGGTCAGCGTc < 1:725889/250‑1 (MQ=255) tATGAGGCGTGGAAGCTGTCGGACGACTACATCGGCGGGCGCGGCTTCTTCCCCGGCGCGTTTGTGGGCCTGCACTGCGAGGACATCAGCGGCGACGGCTGCTACGCGGACTTCGACTACTTCACCTACGAGCCGGTCTAACGGCTCAGGCCGGGTAGCCCAGCGCGCGCGAGAGCGCGAGCCCGGCCTGCTGAAGCTGCTCGCGGAAATTAGCCAGCTCCGCGTCGTCCACGCGGGAGGTCAGCGTCGa < 1:132562/250‑1 (MQ=255) ggCGTGGAAGCTGTCGGACGACTACATCGGGGGGCGCGGCTTCTTCACCGGCGCGTTTGTGGGCCTGCACTGCGAGGACACCAGCGGCGACGGCTGCTACGCGGACTTCGACTACTTCACCTACGAGCCGGTCTAACGGCTCAGGCCGGGTAGCCCAGCGCGCGCGAGAGCGCGAGCCCGGCCTGCTGAAGCTGCTCGCGGAAATTAGCCAGCTCCGCGTCGTCCACGCGGGAGGTCAGCGTCGACAGGc < 1:251686/250‑1 (MQ=255) gCGTGGAAGCTGTCGGACGACTACATCGGCGGGCGCGGCTTCTTCACCGGCGCGTTTGTGGGCCTGCACTGCGAGGACATCAGCGGCGACGGCTGCTACGCGGACTTCGACTACTTCCCCTACGAGCCGGTCTAACGGCTCAGGCCGGGTAGCCCAGCGCGCGCGAGAGCGCGAGCCCGGCCTGCTGAAGCTGCTCGCGGAAATTAGCCAGCTCCGCGTCGTCCACGCGGGAGGTCAGCGTCGACAGGCt < 1:928476/250‑1 (MQ=255) gCGGGGACGCTGGCGGACGACTACCGCGGCGGGCGCGGCTTCTTCGCCGGCGCGTTTGTGGGCCTGCACGGCGAGGACATCGGCGGCGCCGGCTGCTGCGCGGACTTCGACTCCTGCCCCTACGAGCCGGTCTAACGGCTCAGGCCGGGTAGCCCAGCGCGCGCGAGAGCGCGAGCCCGGCCTGCTGAAGCTGCTCGCGGAAATTAGCCAGCTCCGCGTCGTCCACGCGGGAGGTCAGCGTCGACAGGCt < 2:779201/250‑1 (MQ=255) tGGAAGCTGGCGGACGTCTGCCGCGGCGGGCGCGGCTTCTGCACCGGCGCGTGTGTGGGCGTGCACTGCGAGGACATCAGCGGCGACGGCTGCTACGCGGACTTCGACTACTTCCCCTACGAGCCGGTCTAACGGCTCAGGCCGGGTAGCCCAGCGCGCGCGAGAGCGCGAGCCCGGCCTGCTGAAGCTGCTCGCGGAAATTAGCCAGCTCCGCGTCGTCCACGCGGGAGGTCAGCGTCGACAGGCTCAg < 2:851881/250‑1 (MQ=255) gaggCTGTGGGCCGCCTACATCGGCGGGCGCGGCTTCTTCACCGGCGCGTTGGTGGGCCTGCACTGCGAGGACATCGGCGGCGACGGCTGCTGCGCGGCCTTCGACTACTTCCCCTACGAGCCGGTCTAACGGCTCAGGCCGGGTAGCCCAGCGCGCGCGAGAGCGCGAGCCCGGCCTGCTGAAGCTGCTCGCGGAAATTAGCCAGCTCCGCGTCGTCCACGCGGGAGGTCAGCGTCGACAGGCTCAggg < 2:303911/247‑1 (MQ=255) aggcgggcGGCCGACTACAGCGGCGGGCGCGGCTTCTCCCCCGGCGCGTTTGGGGGCCTGCACTGCGAGGACATCAGCGGCGACGGCTGCTACGCGGACTTCGACTACTTCACCTCCGAGCCGGTCTAACGGCTCAGGCCGGGTAGCCCAGCGCGCGCGAGAGCGCGAGCCCGGCCTGCTGAAGCTGCTCGCGGAAATTAGCCAGCTCCGCGTCGTCCACGCGGGAGGTCAGCGTCGACAGGCTCAGggc < 2:147918/243‑1 (MQ=255) cggcggGCGCGGCTTCTTCACCGGCGCGTTTGTGGGGCTGCACTGCGGGGACATCAGCGGCGACGGCTGCCACGCGGGCTTCGACTACTTCACCTACCAGCCCGGCTAACGGCTCAGGCCGGGGAGCCCAGCGCGCGCGGGAGCGCGAGCCCCGCCCGCCGAAGCCGCTCCCGGGAATTAACCAGCTCCCCCGCGTCCCCGCGGGGGGGCCGGGGCGACAGGGCCAGGGCGGCGGGGACGCggggaccgt > 2:882785/1‑244 (MQ=255) ggcgggcgCGGCTTCTTCACCGGCGCGTTTGTGGGCCTGCACTGCGAGGACATCAGCGGCGACGGCTGCTACGCGGACTTCGACTCCTTCACCTACGAGCCGGTCTAACGGCTCAGGCCGGGTAGCCCAGCGCGCGCGAGAGCGCGAGCCCGGCCTGCTGAAGCTGCTCGCGGAAATTAGCCAGCTCCGCGTCGTCCACGCGGGAGGTCAGCGTCGACAGGCTCAGGGCGGCGATGACGCGGGACTCg < 1:198720/248‑1 (MQ=255) cgggcgCGGCTTCTTCACCGGCGCGTTTGTGGGCCTGCACTGCGAGGACATCAGCGGCGACGGCTGCTACGCGGACTTCGACTACTTCACCTACGAGCCGGTCTAACGGCTCAGGCCGGGTAGCCCAGCGCGCGCGAGAGCGCGAGCCCGGCCTGCTGAAGCTGCTCGCGGAAATTAGCCAGCTCCGCGTCGTCCACGCGGGAGGTCAGCGTCGACAGGCTCAGGGCGGCGATGACGCGGGACTCGTggg > 2:76266/1‑249 (MQ=255) cgcgGCTTCTTCCCGGGCGCGTTTGTGGGCCTGCGCTGCGAGGACATCAGCGGCGACGGCTGCTACGCGGCCTTCGCCTACTCCCCCTACGAGCCGGTCTAACGGCTCAGGCCGGGTAGCCCAGCGCGCGCGAGAGCGCGAGCCCGGCCTGCTGAAGCTGCTCGCGGAAATTAGCCAGCTCCGCGTCGTCCACGCGGGAGGTCAGCGTCGACAGGCTCAGGGCGGCGATGACGCGGGACTCGTGGTTCca < 1:757311/250‑1 (MQ=255) ggggCTTCTTCACCGGCGGGTTTGTGGGCCTGCCCTGCGAGGACATCAGCGGCGACGGCTGCTCCGCGGACTTCGACTACTCCCCCTACGAGCCGGTCTAACGGATCAGGCCGGGTAGCCCAGCGCGCGCGAGAGCGCGAGCCCGGCCTGCTGAAGCTGCTCGCGGAAATTAGCCAGCTCCGCGTCGTCCACGCGGGAGGTCAGCGTCGACAGGCTCAGGGCGGCGATGACGCGGGACTCGTGGTTCcac < 1:147452/248‑1 (MQ=255) gcgGCTTCTTCCCCGGCGCGTTTGTGGGCTTGCACGGCGAGGACATCAGCGGCGACGGCTGCTACGCGGACTTCGACTACTCCACCTACGAGCCGGTCTAACGGCTCAGGCCGGGTAGCCCAGCGCGCGCGAGAGCGCGAGCCCGGCCTGCTGAAGCTGCTCGCGGAAATTAGCCAGCTCCGCGTCGTCCACGCGGGAGGTCAGCGTCGACAGGCTCAGGGCGGCGATGACGCGGGACTCGTGGTTCcac < 1:118497/250‑1 (MQ=255) ttcACCGGCGCGTTTGTGGGCCTGCACTGCGAGGACATCAGCGGCGACGGCTGCTACGCGGACTTCGACTACTTCACCTACGAGCCGGTCTAACGGCTCAGGCCGGGTAGCCCAGCGCGCGCGAGAGCGCGAGCCCGGCCTGCTGAAGCTGCTCGCGGAAATTAGCCAGCTCCGCGTCGTCCACGCGGGAGGTCAGCGTCGACAGGCTCAGGGCGGCGATGACGCGGGACTCGTGGTTCCACACCGGCAc > 1:860700/1‑250 (MQ=255) ccccGGCGCGGTTGGGGGCCTGCACTGCGAGGACATCAGGGGCGACGGCGGCTCCGCGGACTGCGACTACTCCACCTACGAGCCGGTCTAACGGCTCAGGCCGGGTAGCCCAGCGCGCGCGAGAGCGCGAGCCCGGCCTGCTGAAGCTGCTCGCGGAAATTAGCCAGCTCCGCGTCGTCCACGCGGGAGGTCAGCGTCGACAGGCTCAGGGCGGCGATGACGCGGGACTCGTGGTTCCACACCGGCAcc < 2:733667/247‑1 (MQ=255) cACCGGCGGGTTTGTGGGCCTGCACTGCGAGGACATCAGCGGGGACGGCTGCTACGCGGACTTCGACTACTTCACCTACGAGCCGGTCTAACGGCTCAGGCCGGGTAGCCCAGCGCGCGCGAGAGCGCGAGCCCGGCCTGCTGAAGCTGCTCGCGGAAATTAGCCAGCTCCGCGTCGTCCACGCGGGAGGTCAGCGTCGACAGGCTCAGGGCGGCGATGACGCGGGACTCGTGGTTCCACACCGGCAc < 1:539311/248‑1 (MQ=255) gTTTGTGGGCCTGCACTGCGAGGACATCAGCGGCGACGGCTGCTACGCGGACTTCGACTACTTCACCTACGAGCCGGTCTAACGGCTCAGGCCGGGTAGCCCAGCGCGCGCGAGAGCGCGAGCCCGGCCTGCTGAAGCTGCTCGCGGAAATTAGCCAGCTCCGCGTCGTCCACGCGGGAGGTCAGCGTCGACAGGCTCAGGGCGGCGATGACGCGGGACTCGTGGTTCCACACCGGCACCGCCACGCAgc > 1:916546/1‑250 (MQ=255) tgGGCCTGCACTGCGAGGACATCAGCGGCGACGGCTGCTACGCGGACTTCGACTACTTCACCTACGAGCCGGTCTAACGGCTCAGGCCGGGTAGCCCAGCGCGCGCGAGAGCGCGAGCCCGGCCTGCTGAAGCTGCTCGCGGAAATTAGCCAGCTCCGCGTCGTCCACGCGGGAGGTCAGCGTCGACAGGCTCAGGGCGGCGATGACGCGGGACTCGTGGTTCCACACCGGCACCGCCACGCAGCGCACg > 1:407333/1‑250 (MQ=255) cactgcgcggggAGCACAGCCGCGGCGACGGCTGCGCCGCGGACTGCGACTCCTTCCCCCGCGAGCCGGTCTAACGGCTCAGGCCGGGTAGCCCAGCGCGCGCGAGAGCGCGAGCCCGGCCTGCTGAAGCTGCTCGCGGAAATTAGCCAGCTCCGCGTCGTCCACGCGGGAGGTCAGCGTCGACAGGCTCAGGGCGGCGATGACGCGGGACTCGTGGTTCCACACCGGCACCGCCACGCAGCGCACGccc < 2:14505/239‑1 (MQ=255) cTGCACTGCGAGGACATCAGCGGCGACGGCTGCTACGCGGACTTCGACTACTTCACCTACGAGCCGGTCTAACGGCTCAGGCCGGGTAGCCCAGCGCGCGCGAGAGCGCGAGCCCGGCCTGCTGAAGCTGCTCGCGGAAATTAGCCAGCTCCGCGTCGTCCACGCGGGAGGTCAGCGTCGACAGGCTCAGGGCGGCGATGACGCGGGCCTCGTGGTTCCACACCGGGACCGCCCCGCAGCGCACGCCCTg > 2:797098/1‑250 (MQ=255) acggCGAGGACATCAGGGGCGACGGCTGCTACGCGGATTCCGCCTACTCCCCCTACGAGCCGGTCTAACGGCTCAGGCCGGGTAGCCCAGCGCGCGCGAGAGCGCGAGCCCGGCCTGCTGAAGCTGCTCGCGGAAATTAGCCAGCTCCGCGTCGTCCACGCGGGAGGTCAGCGTCGACAGGCTCAGGGCGGCGATGACGCGGGACTCGTGGTTCCACACCGGCACCGCCACGCAGCGCACGCCCTGCTCg < 1:819835/247‑1 (MQ=255) cTGCGAGGACATCAGCGGCGCCGGCTGCTCCGCGGACTTCGACTACTCCCCCTACGAGCCGGTCTAACGGCTCAGGCCGGGTAGCCCAGCGCGCGCGAGAGCGCGAGCCCGGCCTGCTGAAGCTGCTCGCGGAAATTAGCCAGCTCCGCGTCGTCCACGCGGGAGGTCAGCGTCGACAGGTTCAGGGCGGCGATGACGCGGGACTCGTGGTTCCACACCGGCACCGCCACGCAGCGCACGCCCTGCTCGt < 1:749774/250‑1 (MQ=255) cTGCGAGGACATCAGCGGCGACGGCTGCTACGCGGACTTCGACTACTTCACCTACGAGCCGGTCTAACGGCTCAGGCCGGGTAGCCCAGCGCGCGCGAGAGCGCGAGCCCGGCCTGCTGAAGCTGCTCGCGGAAATTAGCCAGCTCCGCGTCGTCCACGCGGGAGGTCAGCGTCGACAGGCTCAGGGCGGCGATGACGCGGGACTCGTGGTTCCACACCGGCACCGCCACGCAGCGCACGCCCTGCTCGt > 1:830910/1‑250 (MQ=255) tGCGAGGACATCAGCGGCGACGGCTGCTACGCGGACTTCGACTACTTCACCTACGAGCCGGTCTAACGGCTCAGGCCGGGTAGCCCAGCGCGCGCGAGAGCGCGAGCCCGGCCTGCTGAAGCTGCTCGCGGAAATTAGCCAGCTCCGCGTCGTCCACGCGGGCGGTCAGCGTCGACAGGCTCAGGGCGGCGATGACGCGGGACTCGTGGTTCCACACCGGCACCGCCACGCAGCGCACGCCCTGCTCGtt > 1:652942/1‑250 (MQ=255) cGAGGACACCGGCGGCGTCGGCTGCTACGCGGCCTCCGACTCCTTCCCCGCCGAGCCGGTCTAACGGCTCAGGCCGGGTAGCCCAGCGCGCGCGAGAGCGCGAGCCCGGCCTGCTGAAGCTGCTCGCGGAAATTAGCCAGCTCCGCGTCGTCCACGCGGGAGGTCAGCGTCGACAGGCTCAGGGCGGCGATGACGCGGGACTCGTGGTTCCACACCGGCACCGCCACGCAGCGCACGCCCTGCTCGtt < 2:417736/248‑1 (MQ=255) ggccATCAGCGGCGACGGCTGCTACGCGGACTTCGACTACTCCCCCTCCGAGCCGGTCTAACGGCTCAGGCCGGGTAGCCCAGCGCGCGCGAGAGCGCGAGCCCGGCCTGCTGAAGCTGCTCGCGGAAATTAGCCAGCTCCGCGTCGTCCACGCGGGAGGTCAGCGTCGACAGGCTCAGGGCGGCGATGACGCGGGACTCGTGGTTCCACACCGGCACCGCCACGCAGCGCACGCCCTGCTCGTTCTCtt < 1:882785/247‑1 (MQ=255) gACATCAGCGGCGACGGCTGCTACGCGGACTTCGACTACTTCACCTACGAGCCGGTCTAACGGCTCAGGCCGGGTAGCCCAGCGCGCGCGAGAGCGCGAGCCCGGCCTGCTGAAGCTGCTCGCGGAAATTAGCCAGCTCCGCGTCGTCCACGCGGGAGGTCAGCGTCGACAGGCTCAGGGCGGCGATGACGCGGGACTCGTGGGTCCACACCGGCACCGCCACGCAGCGCACGCCCTGCTCGTTCTCTTc > 1:944778/1‑250 (MQ=255) cATCAGCGGCGACGGCTGCTACGCGGACTTCGACTACTTCACCTACGAGCCGGTCTAACGGCTCAGGCCGGGTAGCCCAGCGCGCGCGAGAGCGCGAGCCCGGCCTGCTGAAGCTGCTCGCGGAAATTAGCCAGCTCCGCGTCGTCCACGCGGGAGGTCAGCGTCGACAGGCTCAGGGCGGCGATGACGCGGGACTCGTGGTTCCACACCGGCACCGCCACGCAGCGCACGCCCTGCTCGTTCTCTTCGc > 1:160027/1‑250 (MQ=255) cAGCGGCGACGGCTGCTACGCGGACTTCGACTACTTCACCTACGAGCCGGTCTAACGGCTCAGGCCGGGTAGCCCAGCGCGCGCGAGAGCGCGAGCCCGGCCTGCTGAAGCTGCTCGCGGAAATTAGCCAGCTCCGCGTCGTCCACGCGGGAGGTCAGCGTCGACAGGCTCAGGGCGGCGATGACGCGGGGCTCGTGGTTCCCCACCGGCACCGCCACGCAGCGCACGCCCTGCCCGTTCTCTTCGCTGt > 2:889448/1‑250 (MQ=255) ggcgACGGCTGCTACGCGGACTTCGACTACTTCACCTACGAGCCGGTCTAACGGCTCAGGCCGGGTAGCCCAGCGCGCGCGAGAGCGCGAGCCCGGCCTGCTGAAGCTGCTCGCGGAAATTAGCCAGCTCCGCGTCGTCCACGCGGGAGGTCAGCGTCGACAGGCTCAGGGCGGCGATGACGCGGGACTCGTGGTTCCACACCGGCACCGCCACGCAGCGCACGCCCTGCTCGTTCTCTTCGCTGTCCAg > 1:649229/1‑250 (MQ=255) gACGGCTGCTACGCGGACTTCGACTACTTCACCTACGAGCCGGTCTAACGGCTCAGGCCGGGTAGCCCAGCGCGCGCGAGAGCGCGAGCCCGGCCTGCTGAAGCTGCTCGCGGAAATTAGCCAGCTCCGCGTCGTCCACGCGGGAGGTCAGCGTCGACAGGCTCAGGGCGGCGATGACGCGGGACTCGTGGTTCCACACCGGCACCGCCACGCAGCGCACGCCCTGCTCGTTCTCTTCGCTGTCCAGGGc > 1:275147/1‑250 (MQ=255) ggCTGCTACGCGGACTTCGACTACTTCACCTACGAGCCGGTCTAACGGCTCAGGCCGGGTAGCCCAGCGCGCGCGAGAGCGCGAGCCCGGCCTGCTGAAGCTGCTCGCGGAAATTAGCCAGCTCCGCGTCGTCCACGCGGGAGGTCAGCGTCGACAGGCTCAGGGCGGCGATGACGCGGGACTCGTGGTTCCACACCGGCACCGCCACGCAGCGCACGCCCTGCTCGTTCTCTTCGCTGTCCAGGGCg > 2:95819/1‑248 (MQ=255) ctACGCGGACTTCGACTACTCCCCCTACGAGCCGGTCTAACGGCTCAGGCCGGGTAGCCCAGCGCGCGCGAGAGCGCGAGCCCGGCCTGCTGAAGCTGCTCGCGGAAATTAGCCAGCTCCGCGTCGTCCACGCGGGAGGTCAGCGTCGACAGGCTCAGGGCGGCGATGACGCGGGACTCGTGGTTCCACACCGGCACCGCCACGCAGCGCACGCCCTGCTCGTTCTCTTCGCTGTCCAGGGCGTAGCCtt < 1:352202/250‑1 (MQ=255) atccgcgGACTTCGCCGACTTCCCCTGCGAGCCGGTCTAACGGCTCAGGCCGGGTAGCCCAGCGCGCGCTAGAGCGCGAGCCCGGCCTGCTGAAGCTGCTCGCGGAAATTAGCCAGCTCCGCGTCGTCCACGCGGGAGGTCAGCGTCGACAGGCTCAGGGCGGCGATGACGCGGGACTCGTGGTTCCACACCGGCACCGCCACGCAGCGCACGCCCTGCTCGTTCTCTTCGCTGTCCAGGGCGTAGCCtt < 2:791611/247‑1 (MQ=255) ggcgagcaCTTCACCTACTTCCCCAGCGAGCCGGTCTACCGGCTCAGGCCGGGTAGCCCAGCGCGCGCGAGAGCGCGAGCCCGGCCTGCTGAAGCTGCTCGCGGAAATTAGCCAGCTCCGCGTCGTCCACGCGGGAGGTCAGCGTCGACAGGCTCAGGGCGGCGATGACGCGGGACTCGTGGTTCCACACCGGCACCGCCACGCAGCGCACGCCCTGCTCGTTCTCTTCGCTGTCCAGGGCGTAGCCTTg < 2:658074/243‑1 (MQ=255) ggACTTCGCCTACTCCCCCTACGAGCCGGTCTAACGGCTCAGGCCGGGTAGCCCAGCGCGCGCGAGAGCGCGAGCCCGGCCTGCTGAAGCTGCTCGCGGAAATTAGCCAGCTCCGCGTCGTCCACGCGGGAGGTCAGCGTCGACAGGCTCAGGGCGGCGATGACGCGGGACTCGTGGTTCCACACCGGCACCGCCACGCAGCGCACGCCCTGCTCGTTCTCTTCGCTGTCCAGGGCGTAGCCTTGCTcgc < 1:52437/250‑1 (MQ=255) gACTTCGACTACTTCACCTACGAGCCGGTCTAACGGCTCAGGCCGGGTAGCCCAGCGCGCGCGAGAGCGCGAGCCCGGCCTGCTGAAGCTGCTCGCGGAAATTAGCCAGCTCCGCGTCGTCCACGCGGGAGGTCAGCGTCGACAGGCTCAGGGCGGCGATGACGCGGGACTCGTGGTTCCACACCGGCACCGCCACGCAGCGCACGCCCTGCTCGTTCTCTTCGCTGTCCAGGGCGTAGCCTTGCTcgcg > 2:477253/1‑250 (MQ=255) cTTCGCCTACTTCCCCTACGAGCCGGTCTAACGGCTCAGGCCGGGTAGCCCAGCGCGCGCGAGAGCGCGAGCCCGGCCTGCTGAAGCTGCTCGCGGAAATTAGCCAGCTCCGCGTCGTCCACGCGGGAGGTCAGCGTCGACAGGCTCAGGGCGGCGATGACGCGGGACTCGTGGTTCCACACCGGCACCGCCACGCAGCGCACGCCCTGCTCGTTCTCTTCGCTGTCCAGGGCGTAGCCTTGCTCGCggg < 1:34315/250‑1 (MQ=255) tctactTCACCTACGAGCCGGTCTAACGGCTCAGGCCGGGTAGCCCAGCGCGCGCGAGAGCGCGAGCCCGGCCTGCTGAAGCTGCTCGCGGAAATTAGCCAGCTCCGCGTCGTCCACGCGGGAGGTCAGCGTCGACAGGCTCAGGGCGGCGATGACGCGGGACTCGTGGTTCCACACCGGCACCGCCACGCAGCGCACGCCCTGCTCGTTCTCTTCGCTGTCCAGGGCGTAGCCTTGCTCGCGGGTCTgc < 1:908483/249‑1 (MQ=255) ctactTCACCTACGAGCCGGTCTAACGGCTCAGGCCGGGTAGCCCAGCGCGCGCGAGAGCGCGAGCCCGGCCTGCTGAAGCTGCTCGCGGAAATTAGCCAGCTCCGCGTCGTCCACGCGGGAGGTCAGCGTCGACAGGCTCAGGGCGGCGATGACGCGGGACTCGTGGTTCCACACCGGCACCGCCACGCAGCGCACGCCCTGCTCGTTCTCTTCGCTGTCCAGGGCGTAGCCTTGCTCGCGGGTCTgcg > 1:525234/1‑250 (MQ=255) tactTCACCTACGAGCCGGTCTAACGGCTCAGGCCGGGTAGCCCAGCGCGCGCGAGAGCGCGAGCCCGGCCTGCTGAAGCTGCTCGCGGAAATTAGCCAGCTCCGCGTCGTCCACGCGGGAGGTCAGCGTCGACAGGCTCAGGGCGGCGATGACGCGGGACTCGTGGTTCCACACCGGCACCGCCACGCAGCGCACGCCCTGCTCGTTCTCTTCGCTGTCCAGGGCGTAGCCTTGCTCGCGGGTCTgcgc > 2:437385/1‑250 (MQ=255) tCACCTACGAGCCGGTCTAACGGCTCAGGCCGGGTAGCCCAGCGCGCGCGAGAGCGCGAGCCCGGCCTGCTGAAGCTGCTCGCGGAAATTAGCCAGCTCCGCGTCGTCCACGCGGGAGGTCAGCGTCGACAGGCTCAGGGCGGCGATGACGCGGGACTCGTGGTTCCACACCGGCACCGCCACGCAGCGCACGCCCTGCTCGTTCTCTTCGCTGTCCAGGGCGTAGCCTTGCTCGCGGGTCTGCGCCAgg > 1:409485/1‑250 (MQ=255) | GCCCATTCCGGTGCCGGAACATGCGGAGAGCGTCTGGCTGCGGGTGGACGT‑GGATACGCTGGTCTACCGCTACAGCTACTCGTTTGATGGCGAGACGTGGCACACCGTGCCGGTGACGTATGAGGCGTGGAAGCTGTCGGACGACTACATCGGCGGGCGCGGCTTCTTCACCGGCGCGTTTGTGGGCCTGCACTGCGAGGACATCAGCGGCGACGGCTGCTACGCGGACTTCGACTACTTCACCTACGAGCCGGTCTAACGGCTCAGGCCGGGTAGCCCAGCGCGCGCGAGAGCGCGAGCCCGGCCTGCTGAAGCTGCTCGCGGAAATTAGCCAGCTCCGCGTCGTCCACGCGGGAGGTCAGCGTCGACAGGCTCAGGGCGGCGATGACGCGGGACTCGTGGTTCCACACCGGCACCGCCACGCAGCGCACGCCCTGCTCGTTCTCTTCGCTGTCCAGGGCGTAGCCTTGCTCGCGGGTCTGCGCCAGG > NZ_CP009273/283852‑284340 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |