Read alignment evidence... | |||||||||||
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seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
* | NZ_CP009273 | 748,577 | 0 | C | A | 34.0% | 194.4 / 23.4 | 95 | intergenic (‑326/+64) | ybgD/gltA | fimbrial protein/citrate synthase |
Reads supporting (aligned to +/- strand): ref base C (49/13); new base A (0/32); total (49/46) | |||||||||||
Fisher's exact test for biased strand distribution p-value = 5.56e-15 | |||||||||||
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Rejected as consensus: Frequency below/above cutoff threshold. |
TTGCTTAAAAATATTGTTAGTTTTATTAAATGCAAAACTAAATTATTGGTATCATGAATTTGTTGTATGATGAATAAAATATAGGGGGGTATAGATAGACGTCATTTTCATAGGGTTAT‑AAATGCGACTACCATGAA‑GTTTTT‑AATTGAAAGTATTGGGTTGCTGATAATTTGAGCTGTTCTATTCTTTTT‑AAATATCTATATAGGTCTGTT‑AA‑TGGA‑TTTTATTTTTACAATTTTTTG‑TGTTTAGGCATATAAAAATCA‑ACCCGCCATATGAACGGCGGGTTAAAATATTTACAACTTAGCAATCAACCATTAACGCTTGATATCGCTTTTAAAGTCGCGTTTTTCATATCCTGTATACAGCTGACGCGGACGGGCAATCTTCATACCGTCACTGTGCATTTCGCTCCAGTGGGCGATCCAGCCAACGGTACGTGCCATTGCGAAAATGACGGTGAACATGGAAGACGGAATACCCATCGCTTTCAGGATGATA > NZ_CP009273/748330‑748824 | ttGCTTAAAAATAGTGTTAGTTTTAGTAAATGCAAAACTAAATTATTGGTATCATGAATTTGTTGTATGATGAATAAAATATAGGGGGGTATAGATAGACGTCATTTTCATAGGGTTAT‑AAATGCGACTACCATGAA‑GTTTTT‑AATTGAAAGTATTGGGTTGCTGATAATTTGAGCTGTTCTATTCTTTTT‑AAATATCTATATAGGTCTGTT‑AA‑TGGA‑TTTTATTTTTACAATTTTTTG‑TGTTTAGGCa < 2:572113/249‑1 (MQ=255) tGCTTAAAAATATTGTTAGTTTTATTAAATGCAAAACTAAATTATTGGTATCATGAATTTGTTGTATGATGAATAAAATATAGGGGGGTATAGATAGACGTCATTTTCATAGGGTTAT‑AAATGCGACTACCATGAA‑GTTTTT‑AATTGAAAGTATTGGGTTGCTGATAATTTGAGCTGTTCTATTCTTTTT‑AAATATCTATATAGGTCTGTT‑AA‑TGGA‑TTTTATTTTTACAATTTTTTG‑TGTTTAGGCata > 1:835608/1‑250 (MQ=255) gCTTAAAAATATTGTTAGTTTTATTAAATGCAAAACTAAATTATTGGTATCATGAATTTGTTGTATGATGAATAAAATATAGGGGGGTATAGATAGACGTCATTTTCATAGGGTTAT‑AAATGCGACTACCATGAA‑GTTTTT‑AATTGAAAGTATTGGGTTGCTGATAATTTGAGCTGTTCTATTCTTTTT‑AAATATCTATATAGGTCTGTT‑AA‑TGGA‑TTTTATTTTTACAATTTTTTG‑TGTTTAGGCata < 2:357553/249‑1 (MQ=255) cTTAAAAATATTGTTAGTTTTATTAAATGCAAAACTAAATTATTGGTATCATGAATTTGTTGTATGATGAATAAAATATAGGGGGGTATAGATAGACGTCATTTTCATAGGGTTAT‑AAATGCGACTACCATGAA‑GTTTTT‑AATTGAAAGTATTGGGTTGCTGATAATTTGAGCTGTTCTATTCTTTTT‑AAATATCTATATAGGTCTGTT‑AA‑TGGA‑TTTTATTTTTACAATTTTTTG‑TGTTTAGGCatat > 1:356273/1‑249 (MQ=255) aaaaTATTGTTAGTTTTATTAAATGCAAAACTAAATTATTGGTATCATGAATTTGTTGTATGATGAATAAAATATAGGGGGGTATAGATAGACGTCATTTTCATAGGGTTAT‑AAATGCGACTACCATGAA‑GTTTTT‑AATTGAAAGTATTGGGTTGCTGATAATTTGAGCTGTTCTATTCTTTTT‑AAATATCTATATAGGTCTGTT‑AA‑TGGA‑TTTTATTTTTACAATTTTTTG‑TGTTTAGGCATATaaaaa < 2:406972/250‑1 (MQ=255) atatTGTTAGTTTTATTAAATGCAAAACTAAATTATTTGTATCATGAATTTGTTGTATGATGAATAAAATATAGGGGGGTATAGATAGACGTCATTTTCATAGGGTTAT‑AAATGCGACTACCATGAA‑GTTTTT‑AATTGAAAGTATTGGGTTGCTGATAATTTGAGCTGTTCTATTCTTTTT‑AAATATCTATATAGGTCTGTT‑AA‑TGGA‑TTTTATTTTTACAATTTTTTG‑TGTTTAGGCATATAAAAATCa < 2:329528/250‑1 (MQ=255) ttGTTAGTTTTATTAAATGCAAAACTAAATTATTGGTATCATGAATTTGTTGTATGATGAATAAAATATAGGGGGGTATAGATAGACGTCATTTTCATAGGGTTAT‑AAATGCGACTACCATGAA‑GTTTTT‑AATTGAAAGTATTGGGTTGCTGATAATTTGAGCTGTTCTATTCTTTTT‑AAATATCTATATAGGTCTGTT‑AA‑TGGA‑TTTTATTTTTACAATTTTTTG‑TGTTTAGGCATATAAAAATCA‑Acc < 1:351696/250‑1 (MQ=255) tGCAAAACTAAATTATTGGTATCATGAATTTGTTGTATGATGAATAAAATATAGGGGGGTATAGATAGACGTCATTTTCATAGGGTTAT‑AAATGCGACTACCATGAA‑GTTTTT‑AATTGAAAGTATTGGGTTGCTGATAATTTGAGCTGTTCTATTCTTTTT‑AAATATCTATATAGGTCTGTT‑AA‑TGGA‑TTTTATTTTTACAATTTTTTG‑TGTTTAGGCATATAAAAATCA‑ACCCGCCATATGAAcggcgg > 2:393045/1‑250 (MQ=255) gaaaaaCTAAATTATGGGATTAATGATTTGGTTGTATGAAAAAAAAAATAAAGGGGGTTAAAGAAAGACGTCTTTTTAATAGTGTTAT‑AAATGAGACTACAATGAT‑GTTTTT‑AATTGAAAGTTTTGGTTTGCTAATATTTTGAGTTTTTTTATTCTTTTA‑AAATATCTATATAGGTCTGTT‑AA‑TGGT‑TTTTATTTTAACATTTTTTTG‑TGTTGGGGAATAAAAAAATCA‑ACCCGCCATATGAACGGCggg < 2:211438/248‑1 (MQ=255) aaaaCTAAATTATTGGTATCATGAATTTGTTGTATGATGAATAAAATATAGGGGGGTATAGATAGACGTCATTTTCATAGGGTTAT‑AAATGCGACTACCATGAA‑GTTTTT‑AATTGAAAGTATTGGGTTGCTGATAATTTGAGCTGTTCTATTCTTTTT‑AAATATCTATATAGGTCTGTT‑AA‑TGGA‑TTTTATTTTTACAATTTTTTG‑TGTTTAGGCATATAAAAATCA‑ACCCGCCATATGAACGGCGGGtt > 1:31402/1‑250 (MQ=255) aaaaCTAAATTATTGGTATCATGAATTTGTTGTATGATGAATAAAATATAGGGGGGTATAGATAGACGTCATTTTCATAGGGTTAT‑AAATGCGACTACCATGAA‑GTTTTT‑AATTGAAAGTATTGGGTTGCTGATAATTTGAGCTGTTCTATTCTTTTT‑AAATATCTATATAGGTCTGTT‑AA‑TGGA‑TTTTATTTTTACAATTTTTTG‑TGTTTAGGCATATAAAAATCA‑ACCCGCCATATGAACGGCGGGt > 1:615399/1‑249 (MQ=255) aaattaaattATTGGTATAATGATTTTGTTGTATGATAAAAAAAATAGGGGGGGTTATAAAAGGACTTATTTTTCATAGGGTTAT‑AAATGCGACTACCATGAA‑TTTTTT‑AATTAAAAGTTTTGGTTTGTTGATATTTGGAGCTTTTTTTTTTTTTTT‑AAATATTTATATAGGTTTGTT‑AT‑TGAA‑TTTTATTTTTACATTTTTTTG‑TTTTGAGGCATAAAAAAATCA‑CCCCGCCATATGAACGGCGGGTTa < 2:126530/250‑1 (MQ=255) tAAATTATTGGTATCATGAATTTGTTGTATGATGAATAAAATATAGGGGGGTATAGATAGACGTCATTTTCATAGGGTTAT‑AAATGCGACTACCATGAA‑GTTTTT‑AATTGAAAGTATTGGGTTGCTGATAATTTGAGCTGTTCTATTCTTTTT‑AAATATCTATATAGGTCTGTT‑AA‑TGGA‑TTTTATTTTTACAATTTTTTG‑TGTTTAGGCATATAAAAATCA‑ACCCGCCATATGAACGGCGGGTTaaaa > 1:825939/1‑249 (MQ=255) aaaTTATTGGTATCATGAATTTGTTGTATGATGAATAAAATATAGGGGGGTATAGATAGACGTCATTTTCATAGGGTTAT‑AAATGCGACTACCATGAA‑GTTTTT‑AATTGAAAGTATTGGGTTGCTGATAATTTGAGCTGTTCTATTCTTTTT‑AAATATCTATATAGGTCTGTT‑AA‑TGGA‑TTTTATTTTTACAATTTTTTG‑TGTTTAGGCATATAAAAATCA‑ACCCGCCATATGAACGGCGGGTTTAAata > 2:326226/1‑250 (MQ=255) tttttGGTATAATTATTTTTTTATATGATAAAAAAAATAAGGGGGGGTAAAGATAGTAGTAATTTTAATAGGTTAAT‑AATGGCGACTCCCATTAA‑GTTTTT‑AATTAAAATTATTGGTTTGCTAATATTTTGAGTTTTTTTATTTTTTTA‑AAATATTTATATAGTTCTGTT‑AA‑TGAA‑TTTTTTTTTTAAATTTTTTTT‑TTTTTAGGAAAAAAAAAATAA‑CCCCGCCATATGAACGGCGGGTTAAAATAttt < 2:617635/247‑1 (MQ=255) ttattGGTATCATGAATTTGTTGTATGATGAATAAAATATAGGGGGGTATAGATAGACGTCATTTTCATAGGGTTAT‑AAATGCGACTACCATGAA‑GTTTTT‑AATTGAAAGTATTGGGTTGCTGATAATTTGAGCTGTTCTATTCTTTTT‑AAATATCTATATAGGTCTGTT‑AA‑TGGA‑TTTTATTTTTACAATTTTTTG‑TGTTTAGGCATATAAAAATCA‑ACCCGCCATATGAACGGCGGGTTAAAATAttt > 1:238498/1‑250 (MQ=255) tATCATGAATTTGTTGTATGATGAATAAAATATAGGGGGGTATAGATAGACGTCATTTTCATAGGGTTAT‑AAATGCGACTACCATGAA‑GTTTTT‑AATTGAAAGTATTGGGTTGCTGATAATTTGAGCTGTTCTATTCTTTTT‑AAATATCTATATAGGTCTGTT‑AA‑TGGA‑TTTTATTTTTACAATTTTTTG‑TGTTTAGGCATATAAAAATCA‑ACCCGCCATATGAACGGCGGGTTTAAATATTTAAAACt > 1:523492/1‑249 (MQ=255) tCATGAATTTGTTGTATGATGAATAAAATATAGGGGGGTATAGATAGACGTCATTTTCATAGGGTTAT‑AAATGCGACTACCATGAA‑GTTTTT‑AATTGAAAGTATTGGGTTGCTGATAATTTGAGCTGTTCTATTCTTTTT‑AAATATCTATATAGGTCTGTT‑AA‑TGGA‑TTTTATTTTTACAATTTTTTG‑TGTTTAGGCATATAAAAATCA‑ACCCGCCATATGAACGGCGGTTTAAAATATTTACAACTTaa > 2:376839/1‑249 (MQ=255) acATGAATTTGTTTAAATATAAAAAAAATATAGGGGGGTATAGATAGACTTTATTTTCATAGGGTTAA‑AAATGCGACTACCATTAA‑TTTTTT‑AATTAAAAGTATTGGTTTGTTAATAATTTGAGTTGTTTTTTTTTTTTA‑AAATATCTATATAGTTTTTTT‑AA‑TGAT‑TTTTATTTTTAAATTTTTTTT‑TTTTTAGAATTAAAAAAACCA‑ACCCGCCATATGAACGGCGGGTTAAAATATTTACAACTTa < 2:237277/248‑1 (MQ=255) ataaaTTTGTTGTATGATAAATAAAAAATGGGGGGGAAAAGATAGACTTTATTTTAATGGGTTTAT‑AAAGGCAAATACAATAAA‑TTTTTT‑ATTTAAAAGTTTTGGGTTGATAATAATTTGAGCTGTTTTTTTTTTTTA‑AAATATCTAAATAGGTTTATT‑AA‑TGGA‑TTTTATTTTTAAAATTTTTGG‑TGTTTAGGAATATAAAAAACA‑ACCCGCCATATGAACGGCGGGTTAAAATATTTACAACTTAGc < 2:221431/246‑1 (MQ=255) aTGAATTTGTTGTATGATGAATAAAATATAGGGGGGTATAGATAGACGTCATTTTCATAGGGTTAT‑AAATGCGACTACCATGAA‑GTTTTT‑AATTGAAAGTATTGGGTTGCTGATAATTTGAGCTGTTCTATTCTTTTT‑AAATATCTATATAGGTCTGTT‑AA‑TGGA‑TTTTATTTTTACAATTTTTTG‑TGTTTAGGCATATAAAAATCA‑ACCCGCCATATGAACGGCGGGGTAAAAAATTTAACACTTAGc > 1:926911/1‑249 (MQ=255) tGAATTTGTTGTATGATGAATAAAATATAGGGGGGTATAGATAGACGTCATTTTCATAGGGTTAT‑AAATGCGACTACCATGAA‑GTTTTT‑AATTGAAAGTATTGGGTTGCTGATAATTTGAGCTGTTCTATTCTTTTT‑AAATATCTATATAGGTCTGTT‑AA‑TGGA‑TTTTATTTTTACAATTTTTTG‑TGTTTAGGCATATAAAAATCA‑ACCCGCCATATGAACGGCGGGTTAAAATATTTACAACTTAGCaa > 1:34758/1‑250 (MQ=255) aTTTGTTGTATGATGAATAAAATATAGGGGGGTATAGATAGACGTCTTTTTCATAGGGTTAT‑AAATGCGACTACCATGAA‑TTTTTT‑AATTGAAAGTATTGGGTTGCTGATAATTTGAGCTGTTCTATTCTTTTT‑AAATATCTATATAGGTCTGTT‑AA‑TGGA‑TTTTATTTTTAAAATTTTTTG‑TGTTTAGGAATATAAAAATCA‑ACCCGCCATATGAACGGCGGGTTAAAATATTTACAACTTAGCAATCa < 1:287756/250‑1 (MQ=255) ttgtATGATGAATAAAATATAGGGGGGTATAGATAGACGTCATTTTCATAGGGTTAT‑AAATGCGACTACCATGAA‑GTTTTT‑AATTGAAAGTATTGGGTTGCTGATAATTTGAGCTGTTCTATTCTTTTT‑AAATATCTATATAGGTCTGTT‑AA‑TGGA‑TTTTATTTTTACAATTTTTTG‑TGTTTAGGCATATAAAAATCA‑ACCCGCCATATGAACGGCGGGTTAAAATATTTATAAATTTGAAATCAACCAt > 2:188665/1‑250 (MQ=255) tgtATGATGAATAAAATATAGGGGGGTATAGATAGACGTCATTTTCATAGGGTTAT‑AAATGCGACTACCATGAA‑GTTTTT‑AATTGAAAGTATTGGGTTGCTGATAATTTGAGCTGTTCTATTCTTTTT‑AAATATCTATATAGGTCTGTT‑AA‑TGGA‑TTTTATTTTTACAATTTTTTG‑TGTTTAGGCATATAAAAATCA‑ACCCGCCATATGAACGGCGGGTTTAAATATTTACAACTTTGCCATAAACCAt > 1:879211/1‑249 (MQ=255) tgtATGATGAATAAAATATAGGGGGGTATAGATAGACGTCATTTTCATAGGGTTAT‑AAATGCGACTACCATGAA‑GTTTTT‑AATTGAAAGTATTGGGTTGCTGATAATTTGAGCTGTTCTATTCTTTTT‑AAATATCTATATAGGTCTGTT‑AA‑TGGA‑TTTTATTTTTACAATTTTTTG‑TGTTTAGGCATATAAAAATCA‑ACCCGCCATATGAACGGCGGGTTAAAAAATTTACAAATTATCAATCAACCAt > 2:265387/1‑249 (MQ=255) gaatgataAAAAAAATTTGGGGGGGTATAAATATATTTATTTTTAATAGGTTTAT‑AAATGCGATTA‑CATGAATTTTTTT‑AATTAAAATTTTTGGTTTGTTAATATTTTGAGTTTTTTTTTTTTTTTT‑AATTATTTATA‑AAGTTTTTT‑AA‑AGGATTTTTTTTTTTACATTTTTTTT‑TTTTTAGCAATAAAAAAACCA‑ACCCGCCATATGAACGGCGGGTTAAAATATTTACAACTTAGCAATCAACCAtt < 2:245327/247‑1 (MQ=255) tagaataaaaaaaaTAGAGGGGGTTAAAAATAAACTTTTTTTTAATGGGTTTAT‑AAATGAGTCTACAATGAT‑TTTTTT‑AATGAAAATTATTGGTTTGTTAATATTTTGAGTTTTTTTTTTTTTTTT‑AAATTTTTATATAGTTTTTTA‑AA‑TGTT‑TTTTTTTTTAAAATTTTTTTG‑TTTTTAGGAATAAAAAAATCA‑ACCCGCCATATGAACGGCGGGTTAAAATATTTACAACTTAGCAATCAACCATTa < 2:382372/239‑1 (MQ=255) taaaaaaTAAAAAAAGGGGGGTTAAAAAAAAACTTCTTTTTCATAGGTTTAT‑AAATGCGATTACCATAAA‑TTTTTT‑AATTAAAAGTATTGGTTTGCTAAAAATTTGAGTTTTTCTATTTTTTTT‑AAATATCTATATAGGTCTGTT‑AA‑TGTA‑TTTTATTTTTAAAATTTTTTG‑TGTTTAGGAATAAAAAAATAA‑CCCCGCCATATGAACGGCGGGTTAAAATATTTACAACTTAGCAATCAACCATTAACg < 1:470990/245‑1 (MQ=255) ttaaTAAAATAGAGGGGGTTATAGATATATTTATTTTTCATAGGTTTAT‑AAATGCTACTACAATGAA‑TTTTTT‑AATGAAAATTATTGGGTTGGTGATATTTTGATCTTTTTTTTTTTTTTT‑AAATATCTATATAGTTTTTTT‑AA‑TGGA‑TTTTATTTTAACAATTTTTTG‑TTTTTATGAATAAAAAAACCA‑ACCCGCCATATGAACGGCGGGTTAAAATATTTACAACTTAGCAATCAACCATTAACGCtt < 2:637138/248‑1 (MQ=255) aaaTATAGGGGGGTATAGATAGACGTCATTTTCATAGGGTTAT‑AAATGCGACTACCATGAA‑GTTTTT‑AATTGAAAGTATTGGGTTGCTGATAATTTGAGCTGTTCTATTCTTTTT‑AAATATCTATATAGGTCTGTT‑AA‑TGGA‑TTTTATTTTTACAATTTTTTG‑TGTTTAGGCATATAAAAATCA‑ACCCGCCATATGAACGGCGGGTTAAAATATTTATAAATTAGCAATCAAACATTAAAGCTTGatatt > 2:877189/1‑249 (MQ=255) ataGGGGGGTATAGATAGACGTCATTTTCATAGGGTTAT‑AAATGCGACTACCATGAA‑GTTTTT‑AATTGAAAGTATTGGGTTGCTGATAATTTGAGCTTTTTTATTTTTTTT‑AAATATCTATATAGGTCTGTT‑AA‑TGGA‑TTTTATTTTTACAATTTTTTG‑TTTTTAGGCATATAAAAATCA‑ACCCGCCATATGAACGGCGGGTTAAAATATTTACAACTTAGCAATCAACCATTAACGCTTGATATCGCtt < 1:679691/250‑1 (MQ=255) taGGGGGGTATAGATAGACGTCATTTTCATAGGGTTAT‑AAATGCGACTACCATGAA‑GTTTTT‑AATTGAAAGTATTGGGTTGCTGATAATTTGAGCTGTTCTATTCTTTTT‑AAATATCTATATAGGTCTGTT‑AA‑TGGA‑TTTTATTTTTACAATTTTTTG‑TGTTTAGGCATATAAAAATCA‑ACCCGCCATATGAACGGCGGGTTAAAATATTTACAAATTAGCAATCAACCATTAACGCTTGATATCGCttt > 1:84827/1‑250 (MQ=255) aGGGGGGTATAGATAGACGTCATTTTCATAGGGTTAT‑AAATGCGACTACCATGAA‑GTTTTT‑AATTGAAAGTATTGGGTTGCTGATAATTTGAGCTGTTCTATTCTTTTT‑AAATATCTATATAGGTCTGTT‑AA‑TGGA‑TTTTATTTTTACAATTTTTTG‑TGTTTAGGCATATAAAAATCA‑ACCCGCCATATGAACGGCGGGTTAAAATATTTACAACTTAGCAATCAACCCTTAACGCTTGATATTGCttt > 1:744358/1‑249 (MQ=255) gggggTATAGATAGACGTCATTTTCATAGGGTTAA‑AAATGCGACTACCATGAT‑GTTTTT‑AATTGAAAGTATTGGTTTGCTGATATTTTGAGTTTTTTTTTTTTTTTA‑AAATTTTTATATAGTTTTGTT‑AA‑TGGA‑TTTTATTTTTAAAATTTTTTG‑TTTTTAGGAATATAAAAATCA‑ACCCGCCATATGAACGGCGGGTTAAAATATTTACAACTTAGCAATCAACCATTAACGCTTGATATCGCTTTTaa < 1:456118/250‑1 (MQ=255) atagatagATTTTATTTTCAGAGGTTTAA‑AAATGCAACTACTAGAAA‑TTTTTT‑AATTAAAAGTATTGGGTTGTTGATAATTTGAGCTTTTTTTTTTTTTTT‑AAATATCTATAGAGGTCTGTA‑AA‑TGTT‑TTTTATTTTTAAATTTTTTTG‑TTTTAAGGAAAAAAAAAAACA‑CCCCGCCATATGAACGGCGGGTTAAAATATTTACAACTTAGCAATCAACCATTAACGCTTGATATCGCTTTTAAAGTcg < 2:500566/249‑1 (MQ=255) agaCGTCATTTTAATAGGTTTAA‑AAATGCGACTA‑CATTAA‑TTTTTTAAATTGAATGTTTTGGTTGGTTTATATTTTGGGTTTTTTTTTTTTTTTT‑AAATTTCTATAGAGGTTTATA‑AA‑TGTT‑TTTTTTTTTTACATTTTTTTG‑TTTTTAGTCATAAAAAAAACA‑CCCCGCCATATGAACGGCGGGTTAAAATATTTACAACTTAGCAATCAACCATTAACGCTTGATATCGCTTTTAAAGTCGCGtttt < 2:542921/249‑1 (MQ=255) aCGTCATTTTCATAGGGTTAT‑AAATGCGACTACCATGAA‑GTTTTT‑AATTGAAAGTATTGGGTTGCTGATAATTTGAGCTGTTCTATTCTTTTT‑AAATATCTATATAGGTCTGTT‑AA‑TGGA‑TTTTATTTTTACAATTTTTTG‑TGTTTAGGCATATAAAAATCA‑ACCCGCCATATGAACGGCGGGTTAAAATATTTACAAATTAGCAATCAACCATTAACGCTTGATATCGCTTTTAAAGTCGCGTTTTTCa > 1:961037/1‑250 (MQ=255) gtatttttAATA‑GGTTATAAAATGCGATTCCCATAAT‑TTTTTA‑AATTGAAATTATTGGGTTGTTGATAATTTGAGCTGTTCTTTTTTTTTA‑AAATTTTTATATAGGTTTGTT‑AA‑TGGA‑TTTTATTTTTACATTTTTTTG‑TTTTTAGGAATAAAAAAATCA‑CCCCGCCATATGAACGGCGGGTTAAAATATTTACAACTTAGCAATCAACCATTAACGCTTGATATCGCTTTTAAAGTCGCGTTTTTCata < 1:554579/246‑1 (MQ=255) ttaaTAGGGTTAT‑AAATGCGACTACTATGAA‑TTTTTT‑AATTAAAAGTATGGGTTTGCTGATAATTTGGGTTGTTTTTTTTTTTTA‑AAATATTTATATAGGTTTTTT‑AA‑TGGT‑TTTTATTTTTAAAATTTTTTG‑TGTTTAGGAAAAAAAAAATCA‑ACCCGCCATATGAACGGCGGGTTAAAATATTTACAACTTAGCAATCAACCATTAACGCTTGATATCGCTTTTAAAGTCGCGTTTTTCATATCCTg < 2:361858/246‑1 (MQ=255) cATAGGGTTAT‑AAATGCGACTACCATGAA‑GTTTTT‑AATTGAAAGTATTGGGTTGCTGATAATTTGAGCTGTTCTATTCTTTTT‑AAATATCTATATAGGTCTGTT‑AA‑TGGA‑TTTTATTTTTACAATTTTTTG‑TGTTTAGGCATATAAAAATCA‑ACCCGCCATATGAACGGCGGGTTTAAATATTTTCAACTTAGCAATCAACCATTAACGCTTGATATCGCTTTTTAAGTCGAGTTTTTCATATCATGtat > 2:769627/1‑250 (MQ=255) atatgtttAA‑AAATGCGACTACTATGAA‑GTTTTT‑AAATAAAATTATTGGTTTGCTAATAATTTGAGTTTTTTTATTTTTTTT‑AAATATTTAAATAGGTCTTTT‑AA‑TGGA‑TTTTATTTTAACATTTTTTTG‑TTTTTAGGAATATAAAAATCA‑CCCCGCCATATGAACGGCGGGTTAAAATATTTACAACTTAGCAATCAGCCATTAACGCTTGATATCGCTTTTAAAGTCGCGTTTTTCATATCCTGtat < 1:235226/243‑1 (MQ=255) tggggTTAT‑AAAGGGGACTACCATGAA‑TTTTTT‑AATGAAAAGTATT‑GGTTTTTTATTATTTTTGTTTTTTTTTTTTTTTTAAAATATTTATATAGGTCTTTT‑AA‑TGTT‑TTTTTTTTTTAAATTTTTTTT‑TTTTTAGCAATAAAAAAACCA‑CCCCGCCATATGAACGGCGGGTTAAAATATTTACAACTTAGCAATCAACCATTAACGCTTGATATCGCTTTTAAAGTCGCGTTTTTCATATCCTGtata < 2:508426/247‑1 (MQ=255) tAGGGTTAT‑AAATGCGACTACCATGAA‑GTTTTT‑AATTGAAAGTATTGGGTTGCTGATAATTTGAGCTGTTCTATTCTTTTT‑AAATATCTATATAGGTCTGTT‑AA‑TGGA‑TTTTATTTTTACAATTTTTCG‑TGTTTAGGCATATAAAAATCA‑ACCCGCCATATGAACGGCGGGTTAAAATATTTAAAACTTAGCAATCAAACATTAAGGCTTGATAAAGCTTTTTAAGTCGCGTTTTTCATTTCCTGtata > 1:64835/1‑249 (MQ=255) tat‑aAATGCGACTACCATGAA‑GTTTTT‑AATTGAAAGTATTGGGTTGCTGATAATTTGAGCTGTTCTATTCTTTTT‑AAATATCTATATAGGTCTGTT‑AA‑TGGA‑TTTTATTTTTACAATTTTTTG‑TGTTTAGGCATATAAAAATCA‑ACCCGCCATATGAACGGCGGGTTAAAATATTTACAACTTAGCAATTAACCATTAACGCTTGATATTGCTTTTAAAGTAGGGTTTTTCATATCCTGTATACAGCTGa > 1:433045/1‑250 (MQ=255) aaaTGCGACTACCATGAT‑TTTTTT‑AATTAAAAGTTTTGGGTTGCTGATTATTTGAGTTTTTTTTTTTTTTTA‑AAATATCTATATAGTTTTTTA‑AA‑TGAA‑TTTTATTTTTA‑AATTTTTTGTTTTTTAGGAAAAAAAAAAACA‑ACCCGCCATATGAACGGCGGGTTAAAATATTTACAACTTAGCAATCAACCATTAACGCTTGATATCGCTTTTAAAGTCGCGTTTTTCATATCCTGTATACAGCTGAcgc < 2:76750/250‑1 (MQ=255) cATGAT‑GTTTTT‑AATTGAAAGTATTGTTTTGCTTATAATTTGTGTTTTTTTTTTTTTTTT‑AATTATTTATATAGTTCTGTT‑AA‑TGGT‑TTTTATTTTAAAATTTTTTTT‑TTTTAAGAAATATAAAAATAA‑ACCCGCCATATGAACGGCGGGTTAAAATATTTACAACTTAGCAATCAACCATTAACGCTTGATATCGCTTTTAAAGTCGCGTTTTTCATATCCTGTATACAGCTGACGCGGACGGGCAATc < 2:603767/250‑1 (MQ=255) a‑GTTTTT‑AATTAAAATTTTTGGGTTTCTAATAATTTGAGCTTTTCTATTTTTTTT‑AAATATCTATATAGGTCTTTT‑AA‑TGGA‑TTTTATTTTTACAATTTTTTG‑TGTTTAGGAATAAAAAAATCA‑ACCCGCCATATGAACGGCGGGTTAAAATATTTACAACTTAGCAATCAACCATTAACGCTTGATATCGCTTTTAAAGTCGCGTTTTTCATATCCTGTATACAGCTGACGCGGACGGGCAATCTTCAt < 1:592281/250‑1 (MQ=255) tttt‑AATTGAAAGTATTGGGTTGCTGATAATTTGAGCTGTTCTATTCTTTTT‑AAATATCTATATAGGTCTGTT‑AA‑TGGA‑TTTTATTTTTACAATTTTTTG‑TGTTTAGGCATATAAAAATCA‑ACCCGCCATATGAACGGCGGGTTTAAATATTTTTAAATTAGCAATCAACCATTAACGCTTGATATCGCTTTTAAAATCGCGGTTTTCATAACCCTGATACAGCTGACGAGGACGGGCAATCTTAATAc > 2:432984/1‑249 (MQ=255) ttt‑AATAGAAA‑TTTTGGGTTTGTTATTATTTGGGGTTTTTTTTTTTTTTT‑AAATTATTAAATAAGTTTTTTAAA‑TGTA‑TTTTTTTTTTAAATTTTTTTT‑TTTTAAGAAAAAAAAAAAACA‑ACCCGCCATATGAACGGCGGGTTAAAATATTTACAACTTAGCAATCAACCATTAACGCTTGATATCGCTTTTAAAGTCGCGTTTTTCATATCCTGTATACAGCTGACGCGGACGGGCAATCTTCATAcc < 2:437413/249‑1 (MQ=255) t‑AATAGAAAGTTTGGGGTTGCTAATATTTGGAGTTTTTTTATTTTTTTA‑AAATATTTATATGGTTCTGTA‑AA‑TGAT‑TTTTATTTTTAAATTTTTTTG‑TTTTTAGGAATATAAAAATCA‑ACCCGCCATATGAACGGCGGGTTAAAATATTTACAACTTAGCAATCAACCATTAACGCTTGATATCGCTTTTAAAGTCGCGTTTTTCATATCCTGTATACAGCTGACGCGGACGGGCAATCTTCATACCGt < 1:27403/249‑1 (MQ=255) aaaGTATTGGGTTGCTGATAATTTGAGCTGTTCTATTCTTTTT‑AAATATCTATATAGGTCTGTT‑AA‑TGGA‑TTTTATTTTTACAATTTTTTG‑TGTTTAGGCATATAAAAATCA‑ACCCGCCATATGAACGGCGGGTTAAAATATTTACAAATTAGCAATCAACCATTAACGCTTGATATCGCTTTTCAAGTCGCGTTTTTTATCTCCTGTATACATCTGACGCGGACGGGCAATCTTCCTACCGTCTCtgtg > 2:534844/1‑250 (MQ=255) aTTGGGTTGCTGATAATTTGAGCTGTTCTATTCTTTTT‑AAATATCTATATAGGTCTGTT‑AA‑TGGA‑TTTTATTTTTACAATTTTTTG‑TGTTTAGGCATATAAAAATCA‑ACCCGCCATATGAACGGCGGGTTAAAATATTTACAATTTATCAGTCAAACTTTAACGATTGTTATCGTTTTTCAAGCTGTGTTTTTCATTTCTTCTATAATGCTCACGAGGATCGGCAAATCTCTTAACGTCAACGTGGAttt > 2:176608/1‑250 (MQ=255) gggTTGCTGATAATTTGAGCTGTTCTATTCTTTTT‑AAATATCTATATAGGTCTGTT‑AA‑TGGA‑TTTTATTTTTACAATTTTTTG‑TGTTTAGGCATATAAAAATCA‑ACCCGCCATATGAACGGCGGGTTAAAATATTTACAACTTAGCAATCAACCATTAACGCTTGATATCGCTTTTAAAGTCGCGTTTTTCATATCCTGTATACAGCTGACGCGGACGGGCAATCTTCATACCGTCACTGTGCATTTCGc > 1:30968/1‑250 (MQ=255) tttgtgaaTAATTTGA‑TTGTTTTTTTTTTTTTAAAATATCTATATAGGTTTGTA‑AA‑TGGA‑TTTTTTTTTTAAATTTTTTTG‑TGTTTAGGAATAAAAAAATCA‑ACCCGCCATATGAACGGCGGGTTAAAATATTTACAACTTAGCAATCAACCATTAACGCTTGATATCGCTTTTAAAGTCGCGTTTTTCATATCCTGTATACAGCTGACGCGGACGGGCAATCTTCATACCGTCACTGTGCATTTCGCTc < 1:643615/243‑1 (MQ=255) ttGCTGATAATTTGAGCTGTTCTATTCTTTTT‑AAATATCTATATAGGTCTGTT‑AA‑TGGA‑TTTTATTTTTACAATTTTTTG‑TGTTTAGGCATATAAAAATCA‑ACCCGCCATATGAACGGCGGGTTAAAATATTTACAACTTAGCAATCAACCATTAACCCTTGATATCGCTTTTAAAGTCGCGTTTTTCATATCCTGTATACAGCTGACGCGGACGGGCAATCTTCATACCGTCACTGTGCATTtctctc > 1:484590/1‑249 (MQ=255) tGCTGATAATTTGAGCTGTTCTATTCTTTTT‑AAATATCTATATAGGTCTGTT‑AA‑TGGA‑TTTTATTTTTACAATTTTTTG‑TGTTTAGGCATATAAAAATCA‑ACCCGCCATATGAACGGCGGGTTAAAATATTTACAACTTAGCAATCAACCATTAACGCTTGATATCGCTTTTAAAGTCGCGTTTTTCATATCCTGTATACAGCTGACGCGGACGGGCAATCTTCATACCGTCACTGTGCATTTCGCTc > 1:374836/1‑248 (MQ=255) gttGATATTTTGAGTTTTTTTATTTTTTTT‑AAATATCTATATAGGTTTTTT‑AA‑TGGT‑TTTTATTTTTAAATTTTTTTG‑TGTTTAGGAATAAAAAAACCA‑ACCCGCCATATGAACGGCGGGTTAAAATATTTACAACTTAGCAATCAACCATTAACGCTTGATATCGCTTTTAAAGTCGCGTTTTTCATATCCTGTATACAGCTGACGCGGACGGGCAATCTTCATACCGTCACTGTGCATTTCGCTCCa < 1:291841/247‑1 (MQ=255) tatttaTTTGAGTTTTTTTTTTTTTTTT‑AAATATTAATATAGGTTTTTA‑AA‑TGAT‑TTTTTTTTTTAAATTTTTTTG‑TGTTTAGACATAAAAAAATCA‑CCCCGCCATATGAACGGCGGGTTAAAATATTTACAACTTAGCAATCAACCATTAACGCTTGATATCGCTTTTAAAGTCGCGTTTTTCATATCCTGTATACAGCTGACGCGGACGGGCAATCTTCATACCGTCACTGTGCATTTCGCTCCAGt < 2:18665/244‑1 (MQ=255) gATAATTTGAGCTGTTCTATTCTTTTT‑AAATATCTATATAGGTCTGTT‑AA‑TGGA‑TTTTATTTTTACAATTTTTTG‑TGTTTAGGCATATAAAAATCA‑ACCCGCCATATGAACGGCGGGTTATAAAATTTACAAATTTACAAATAACCATTTACGCTTGTTATCGCTTTTAAAGTCGCGTTTTTCATATCCTTTATACAGCTGATGCGGACGGGCAATCTTCATATCGTCACTGTGATCTTCTCTCCCGTgg > 2:212559/1‑250 (MQ=255) ttaTTTGAGTTTTTTTTTTTTTTTT‑AAATATTTTTATAGTTCTGTA‑AA‑TGTT‑TTTTTTTTTTAAATTTTTTTG‑TTTTTAGAAATAAAAAAATCA‑CCCCGCCATATGAACGGCGGGTTAAAATATTTACAACTTAGCAATCAACCATTAACGCTTGATATCGCTTTTAAAGTCGCGTTTTTCATATCCTGTATACAGCTGACGCGGACGGGCAATCTTCATACCGTCACTGTGCATTTCGCTCCAGTGGGc < 2:909766/248‑1 (MQ=255) ttgatttttttATTTTTTTT‑AAAATTATATATAAGTCTTTT‑AAGTGTT‑TTTTTTTTTAACATTTTTTTT‑TGTGTAGGATAAAAAAAATCA‑CCCCGCCATATGAACGGCGGGTTAAAATATTTACAACTTAGCAATCAACCATTAACGCTTGATATCGCTTTTAAAGTCGCGTTTTTCATATCCTGTATACAGCTGACGCGGACGGGCAATCTTCATACCGTCACTGTGCATTTCGCTCCAGTGGGCGAt < 2:871706/239‑1 (MQ=255) aGCTGTTCTATTCTTTTT‑AAATATCTATATAGGTCTGTT‑AA‑TGGT‑TTTTTTTTTTACATTTTTTTG‑TTTTTAGGCATAAAAAAATCA‑ACCCGCCATATGAACGGCGGGTTAAAATATTTACAACTTAGCAATCAACCATTAACGCTTGATATCGCTTTTAAAGTCGCGTTTTTCATATCCTGTATACAGCTGACGCGGACGGGCAATCTTCATACCGTCACTGTGCATTTCGCTCCAGTGGGCGATCCAg < 1:408431/250‑1 (MQ=255) ttttttgtttttttta‑AAATATTTATATAGGTCTATA‑AA‑TGGA‑TTTTTTTTTTACAATTTTTTG‑TTTTTAGGAATAAAAAAATCA‑ACCCGCCATATGAACGGCGGGTTAAAATATTTACAACTTAGCAATCAACCATTAACGCTTGATATCGCTTTTAAAGTCGCGTTTTTCATATCCTGTATACAGCTGACGCGGACGGGCAATCTTCATACCGTCACTGTGCATTTCGCTCCAGTGGGCGATCCAGc < 1:848391/238‑1 (MQ=255) tttATTTTTTTT‑AAATATCTATATAGGTTTTTT‑AA‑TGGT‑TTTTTTTTTTACAATTTTTTG‑TTTTAAGAAATAAAAAAACCA‑CCCCGCCATATGAACGGCGGGTTAAAATATTTACAACTTAGCAATCAACCATTAACGCTTGATATCGCTTTTAAAGTCGCGTTTTTCATATCCTGTATACAGCTGACGCGGACGGGCAATCTTCATACCGTCACTGTGCATTTCGCTCCAGTGGGCGATCCAGCCAAc < 1:92626/247‑1 (MQ=255) tttttttttta‑AAATTTCTATATGGGT‑TTTT‑AA‑TTGATTTTTTTTTTTAAATTTTTTTG‑TTTTTAGACAAAAAAAAATCA‑ACCCGCCATATGAACGGCGGGTTAAAATATTTACAACTTAGCAATCAACCATTAACGCTTGATATCGCTTTTAAAGTCGCGTTTTTCATATCCTGTATACAGCTGACGCGGACGGGCAATCTTCATACCGTCACTGTGCATTTCGCTCCAGTGGGCGATCCAGCCAACg < 2:562080/243‑1 (MQ=255) cTATTCTTTTT‑AAATATCTATATAGGTCTGTT‑AA‑TGGA‑TTTTATTTTTACAATTTTTTG‑TGTTTAGGCATATAAAAATCA‑ACCCGCCATATGAACGGCGGGTTAAAATATTTACAACTTAGCAATCAACCATTAACGCTTGATATCGCTTTTAAAGTCGCGTTTTTCATATCCTGTATACAGCTGACGCGGACGGGCAATCTTCATACCGTCACTGTGCATTTCGCTCCAGTGGGCGATCCAGCCAACgg > 1:406631/1‑250 (MQ=255) aTTCTTTTT‑AAATATCTATATAGGTCTGTT‑AA‑TGGA‑TTTTATTTTTACAATTTTTTG‑TGTTTAGGCATATAAAAATCA‑ACCCGCCATATGAACGGCGGGTTAAAATATTTACAACTTAGCAATCAACCATTAAAGCTTGATATCGCTTTTAAAGTCGCGTTTTTCATATCCTGTATACAGCTGACGCGGGCGGGCAATCTTCATACCGTCACTGTGCCTTTCGCTCCAGTGGGCGATCCAGCCAACGGTa > 1:456349/1‑250 (MQ=255) cTTTTT‑AAATATCTATATAGGTCTGTT‑AA‑TGGA‑TTTTATTTTTACAATTTTTTG‑TGTTTAGGCATATAAAAATCA‑ACCCGCCATATGAACGGCGGGTTAAAATATTTACAACTTAGCAATCAACCATTAACGCTTTATATCGCTTTTAAAGTCGCGTTTTTCATATCCTTTATACAGCTGACGCGGACGGGCAATATTCATACCGTCACTGTGCATTTCGCTCCAGTGGGCGATCCCGCCCACTGTACGt > 2:317292/1‑250 (MQ=255) cTTTTT‑AAATATCTATATAGGTCTGTT‑AA‑TGGA‑TTTTATTTTTACAATTTTTTG‑TGTTTAGGCATATAAAAATCA‑ACCCGCCATATGAACGGCGGGTTAAAATATTTACAACTTAGCAATCAACCATTAACGCTTGATATCGCTTTTAAAGTCGCGTTTTTCCTATCCTGTATACAGCTGACCCGGACGGGCAATTTTCATACCCTCCCTGTGCATTTCCCTCCAGTGGGCGCTCCACCCCACggcatct > 1:225945/1‑245 (MQ=255) tttt‑AAATATCTATATAGGTCTGTT‑AA‑TGGA‑TTTTATTTTTACAATTTTTTG‑TGTTTAGGCATATAAAAATCA‑ACCCGCCATATGAACGGCGGGTTAAAATATTTACAACTTAGCAATCAACCATTAACGCTTGATATCGCTTTTAAAGTCGCGTTTTTCATATCCTGTATACAGCTTACGCGGACGGGCAATCTTCATACCGTCACTGTGCATTTCGCTCCAGTGGGCGATCCAGCCAACGGTACGTGc > 1:254419/1‑250 (MQ=255) tttt‑AAATATCTATATAGGTCTGTT‑AA‑TGGA‑TTTTATTTTTACAATTTTTTG‑TGTTTAGGCATATAAAAATCA‑ACCCGCCATATGAACGGCGGGTTAAAATATTTACAACTTAGCAATCAACCATTAACGCTTGATATCGCTTTTAAAGTCGCGTTTTTCATATCCTGTATACAGCTGACGCGGACGGGCAATCTTCATACCGTCACTGTGCATTTCGCTCCAGTGGGCGATCCAGCCAACGGTACGTGc > 1:62650/1‑250 (MQ=255) ttta‑AAATATCTAAATAGGTTTATT‑AA‑TTTT‑TTTTATTTTAAAAATTTTTTT‑TGTTTAGAC‑TAAAAAAATAACACCCGCCATATGAACGGCGGGTTAAAATATTTACAACTTAGCAATCAACCATTAACGCTTGATATCGCTTTTAAAGTCGCGTTTTTCATATCCTGTATACAGCTGACGCGGACGGGCAATCTTCATACCGTCACTGTGCATTTCGCTCCAGTGGGCGATCCAGCCAACGGTACGTg < 2:546598/249‑1 (MQ=255) aaaTTTCTCTAAGGGTTTATT‑AA‑TGGT‑TTTTTTTTTTAATATTTTTTG‑TTTTAAGGAATAAAAAAATCA‑ACCCGCCATATGAACGGCGGGTTAAAATATTTACAACTTAGCAATCAACCATTAACGCTTGATATCGCTTTTAAAGTCGCGTTTTTCATATCCTGTATACAGCTGACGCGGACGGGCAATCTTCATACCGTCACTGTTCATTTCGCTCCAGTGGGCGATCCAGCCAACGGTACGTGCCAt < 2:821975/249‑1 (MQ=255) atCTATATAGGTCTGTT‑AA‑TGGA‑TTTTATTTTTACAATTTTTTG‑TGTTTAGGCATATAAAAATCA‑ACCCGCCATATGAACGGCGGGTTAAAATATTTACAACTTAGCAATCAACCATTAACGCTTGATATCGCTTTTAAAGTCGCGTTTTTCATATCCTGTATACAGCTGACGCGGACGGGCAATCTTCATACCGTCACTGTGCATTTCGCTCCAGTGGGCGATCCAGCCAACGGTACGTGCCATTGCg > 1:685726/1‑249 (MQ=255) ttatataGGTCTTTA‑AA‑TGAA‑TTTTATTTTTACATTTTTTTG‑TGTTAAGATATAAAAAAATCA‑ACCCGCCATATGAACGGCGGGTTAAAATATTTACAACTTAGCAATCAACCATTAACGCTTGATATCGCTTTTAAAGTCGCGTTTTTCATATCCTGTATACAGCTGACGCGGACGGGCAATCTTCATACCGTCACTGTGCATTTCGCTCCAGTGGGCGATCCAGCCAACGGTACGTGCCATTGCGaa < 1:379239/248‑1 (MQ=255) tatataGGTCTGTT‑AA‑TGGA‑TTTTATTTTTACAATTTTTTG‑TGTTTAGGCATATAAAAATCA‑ACCCGCCATATGAACGGCGGGTTAAAATATTTACAACTTAGCAATCAACCATTAAAGCTTGATATCGCTTTTTAAGTCGCGTTTTTCATATCCTGTATAAAGCTGACGCGGACGGGCAATCTTCATACCGTCACTGTGCATTTCGCTCCAGTGGGCGATCCAGCCAAACGTACGTGCCATTGCGaaaa > 2:918870/1‑250 (MQ=255) tataGTTTTTTT‑AA‑TGTT‑TTTTTTTTTTAAATTTTTTTG‑TTTTTAGAAAAAAAAAAACCA‑ACCCGCCATATGAACGGCGGGTTAAAATATTTACAACTTAGCAATCAACCATTAACGCTTGATATCGCTTTTAAAGTCGCGTTTTTCATATCCTGTATACAGCTGACGCGGACGGGCAATCTTCATACCGTCACTGTGCATTTCGCTCCAGTGGGCGATCCAGCCAACGGTACGTGCCATTGCGAAAATg < 2:162037/250‑1 (MQ=255) tataGGTCTGTT‑AA‑TGGA‑TTTTATTTTTACAATTTTTTG‑TGTTTAGGCATATAAAAATCA‑ACCCGCCATATGAACGGCGGGTTAAAATATTTTCAACTTAGCAATCAACCCTTAACGCTTGATATCGCTTTTAAAGTCGCGTTTTTTATATCCTGTATACAGCTGACGCGGACGGGCAATCTTCATACCCTCCCTGTGCATTTTGCTCCAGTGGGCGATCCAGCCAACGGTAAGTGCCATTGCGAAAAt > 2:809409/1‑249 (MQ=255) aGGTCTGTT‑AA‑TGGA‑TTTTATTTTTACAATTTTTTG‑TGTTTAGGCATATAAAAATCA‑ACCCGCCATATGAACGGCGGGTTAAAATATTTATAACTTAGCAATCAACCATTAAAGCTTGATATCGCTTTTAAAGTCGCGTTTTTCATATCCTGTATACAGCTGACGCGGACGGGCAATCTTCATACCGTCACTGTGCATTTCGCTCCAGTGGGCGATCCAGCCACCCGTACGTGCCATTGCGAAAATGACg > 2:865986/1‑250 (MQ=255) tCTGTT‑AA‑TGGA‑TTTTATTTTTACAATTTTTTG‑TGTTTAGGCATATAAAAATCA‑ACCCGCCATATGAACGGCGGGTTAAAATATTTACAACTTAGCAATCAACCATTAACGCTTGATATCGCTTTTAAAGTCGCGTTTTTCATATCCTGTATACAGCTGACGCGGACGGGCAATCTTCATACCGTCACTGTGCATTTCGCTCCAGTGGGCGATCCAGCCAACGGTACGTGCCATTGCGAAAATGACGGt > 1:577341/1‑249 (MQ=255) ttt‑AA‑GGGA‑TTTTATTTTTACATTTTTTTG‑TTTTTAGGAATAAAAAAATCA‑ACCCGCCATATGAACGGCGGGTTAAAATATTTACAACTTAGCAATCAACCATTAACGCTTGATATCGCTTTTAAAGTCGCGTTTTTCATATCCTGTATACAGCTGACGCGGACGGGCAATCTTCATACCGTCACTGTGCATTTCGCTCCAGTGGGCGATCCAGCCAACGGTACGTGCCATTGCGAAAATGACGGTGaa < 1:393045/248‑1 (MQ=255) gTT‑AA‑TGGA‑TTTTATTTTTACAATTTTTTG‑TTTTTAGGAATAAAAAAATCA‑ACCCGCCATATGAACGGCGGGTTAAAATATTTACAACTTAGCAATCAACCATTAACGCTTGATATCGCTTTTAAAGTCGCGTTTTTCATATCCTGTATACAGCTGACGCGGACGGGCAATCTTCATACCGTCACTGTGCATTTCGCTCCAGTGGGCGATCCAGCCAACGGTACGTGCCATTGCGAAAATGACGGTGaa < 1:411630/249‑1 (MQ=255) ttttttttAAAATTTTTTG‑TGTTTAGAAAAAAAAAAATCA‑ACCCGCCATATGAACGGCGGGTTAAAATATTTACAACTTAGCAATCAACCATTAACGCTTGATATCGCTTTTAAAGTCGCGTTTTTCATATCCTGTATACAGCTGACGCGGACGGGCAATCTTCATACCGTCACTGTGCATTTCGCTCCAGTGGGCGATCCAGCCAACGGTACGTGCCATTGCGAAAATGACGGTGAACATGGAAGACg < 1:947210/246‑1 (MQ=255) tttttACAATTTTTTG‑TGTTTAGGCATATAAAAATCA‑ACCCGCCATATGAACGGCGGGTTTAAATATTTATAAATTAGCAATCAAACCTTAACGCTTGATTTCTCTTTTTAAATCGCGTTTTTCCTATCCTGTATACAGCTGACGCGGACGGGCAATTTTCATACCCTCACTGTGCATTTCCCTCCCTTGGGCGATACAGCCACCGGTACTGTCCATTGGGAAAATGTGGGGGAAGCAGGAAGACGGag > 2:523952/1‑248 (MQ=255) ttttAAAATTTTTTG‑TTTTAAGGCAAAAAAAAATCA‑ACCCGCCATATGAACGGCGGGTTAAAATATTTACAACTTAGCAATCAACCATTAACGCTTGATATCGCTTTTAAAGTCGCGTTTTTCATATCCTGTATACAGCTGACGCGGACGGGCAATCTTCATACCGTCACTGTGCATTTCGCTCCAGTGGGCGATCCAGCCAACGGTACGTGCCATTGCGAAAATGACGGTGAACATGGAAGACGGAAt < 1:756623/249‑1 (MQ=255) tACAATTTTTTG‑TGTTTAGGCATATAAAAATCA‑ACCCGCCATATGAACGGCGGGTTAAAATATTTACAACTTAGCAATCAACCATTAACGCTTTATATCGCTTTTAAAGTCGCGTTTTTCATATCCTGTATACAGCTGACGCGGACGGGCAATCTTCATACCGTCACTGTGCATTTCGCTCCAGTGGGCGATCCAGCCAACGGTACGTGCCATTGCGAAAATGACGGTGAACATGGAAGACGGAATAcc > 1:418985/1‑249 (MQ=255) tACAATTTTTTG‑TGTTTAGGCATATAAAAATCA‑ACCCGCCATATGAACGGCGGGTTAAAATATTTACAACTTAGCAATCAACCATTAACGCTTGATATCGCTTTTAAAGTCGCGTTTTTCATATCCTGTATACAGCTGACGCGGACGGGCAATCTTCATACCGTCACTGTGCATTTCGCTCCAGTGGGCGATCCAGCCAACGGTACGTGCCATTGCGAAAATGACGGTGAACATGGAAGACGGAATAcc > 1:452208/1‑249 (MQ=255) aaTTTTTTG‑TGTTTAGGCATATAAAAATCA‑ACCCGCCATATGAACGGCGGGTTAAAATATTTACAACTTAGCAATCAACCCTTAACGCTTGATATCGCTTTTAAAGTCGCGTTTTTCATATCCTGTATACAGCTGGCGCGGACGGGCAATCTTCATACCGTCACTGTGCATTTCGCTCCAGTGGGCGATCCCGCCAACAGTACGTGCCATTGCGAAAATGACGGTGAAAATGGAAGACGGAATACCCATc > 1:420226/1‑250 (MQ=255) aaTTTTTTG‑TGTTTAGGCATATAAAAATCA‑ACCCGCCATATGAACGGCGGGTTAAAATATTTACAACTTAGCAATCAACCATTAACGCTTGATATCGCTTTTAAAGTCGCGTTTTTCATATCCTGTATACAGCTGACGCGGACGGGCAATCTTCATACCGTCACTGTGCATTTCGCTCCAGTGGGCGATCCAGCCAACGGTACGTGCCATTGCGAAAATGACGGTGAACATGGAAGACGGAATACCCCTc > 1:237435/1‑250 (MQ=255) aTTTTTTG‑TGTTTAGGCATATAAAAATCA‑ACCCGCCATATGAACGGCGGGTTAAAATATTTACAAATTAGCAAACAAACATTAAAGCTTGATATCGCTTTTTAAGTAGCGTTTTTTCTATCCTGTATAAAACTGACGCGGACGGGCAAACTTCATTCCGTCACTGTGCATTTTGCTCCAGTGGGCGATTCAGCCAACGGTAAGTGCCCTTGTGAAAATGACGGTGAACATGGAAAACGGAATAACCCTct > 2:585550/1‑249 (MQ=255) ttttttG‑TGTTTAGGCATATAAAAATCA‑ACCCGCCATATGAACGGCGGGTTAAAATATTTACAACTTAGCAATCAACCATTAACGCTTGATATCGCTTTTAAAGTCGCGTTTTTCATATCCTGTATACAGCTGACGCGGACGGGCAATCTTCATACCGTCACTGTGCATTTCGCTCCAGTGGGCGATCCAGCCAACGGTACGTGCCATTGCGAAAATGACGGTGAACATGGAAGACGGAATACCCATCGc > 1:519660/1‑250 (MQ=255) tttttG‑TGTTTAGGCATATAAAAATCA‑ACCCGCCATATGAACGGCGGGTTTAAATATTTACAACTTAGCAAACAACCATTAAAGCTTGATATCGCTTTTTAAGTCGCGTTTTTCATATCCTGTATAAAGCTGACGCGGACCGGCAAACTTCATACCGTCACTGTGTATTTTGCTCCAGTGGGCGGACCAGCCAACGGTACGTGCCAATTGGAAAAAGAAGGTGGAAATGGAAAACCGAATACCCATCggc > 2:205311/1‑248 (MQ=255) gtttttAGGAATAAAAAAAACA‑CCCCGCCATATGAACGGCGGGTTAAAATATTTACAACTTAGCAATCAACCATTAACGCTTGATATCGCTTTTAAAGTCGCGTTTTTCATATCCTGTATACAGCTGACGCGGACGGGCAATCTTCATACCGTCACTGTGCATTTCGCTCCAGTGGGCGATCCAGCCAACGGTACGTGCCATTGCGAAAATGACGGTGAACATGGAAGACGGAATACCCATCGCTTTCa < 1:387327/246‑1 (MQ=255) ggCATATAAAAATCA‑ACCCGCCATATGAACGGCGGGTTAAAATATTTACAACTTAGCAATCAACCATTAACGCTTGATATCGCTTTTAAAGTCGCGTTTTTCATATCCTGTATACAGCTGACGCGGACGGGCAATCTTCATACCGTCACTGTGCATTTCGCTCCAGTGGGCGATCCAGCCAACGGTACGTGCCATTGCGAAAATGACGGTGAACATGGAAGACGGAATACCCATCGCTTTCAGGATGATa > 1:549784/1‑250 (MQ=255) | TTGCTTAAAAATATTGTTAGTTTTATTAAATGCAAAACTAAATTATTGGTATCATGAATTTGTTGTATGATGAATAAAATATAGGGGGGTATAGATAGACGTCATTTTCATAGGGTTAT‑AAATGCGACTACCATGAA‑GTTTTT‑AATTGAAAGTATTGGGTTGCTGATAATTTGAGCTGTTCTATTCTTTTT‑AAATATCTATATAGGTCTGTT‑AA‑TGGA‑TTTTATTTTTACAATTTTTTG‑TGTTTAGGCATATAAAAATCA‑ACCCGCCATATGAACGGCGGGTTAAAATATTTACAACTTAGCAATCAACCATTAACGCTTGATATCGCTTTTAAAGTCGCGTTTTTCATATCCTGTATACAGCTGACGCGGACGGGCAATCTTCATACCGTCACTGTGCATTTCGCTCCAGTGGGCGATCCAGCCAACGGTACGTGCCATTGCGAAAATGACGGTGAACATGGAAGACGGAATACCCATCGCTTTCAGGATGATA > NZ_CP009273/748330‑748824 |
Alignment Legend |
---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |