| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NZ_CP009273 | 3,924,078 | 0 | T | G | 37.9% | 104.6 / 15.8 | 68 | T126P (ACC→CCC) | ravA | ATPase RavA |
| Reads supporting (aligned to +/- strand): ref base T (8/33); new base G (25/0); total (35/33) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 2.65e-11 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
| Rejected as consensus: Frequency below/above cutoff threshold. | |||||||||||
GTGACCTGCAAGGCATCAGGAACCGGATTGTCGTTTTCATCCTGTTGACTGGTCAGCATGGAGCGGAAATTCGCTTTATCCTGCACTTTATCTAACCACAGACGAATCAGCATGCGGTCATATAACGCTTCCAGACTGCTGTCTGCTTCCGGCAGCTCGTTGGAGGCCGCCACCAGCAGACGCATCGGGA‑TTTTTTCTACGTGTGCACCGTTGCGGAACTGGCGCTCGTTAATGGCGGTGAGCAAGGTATTAAGAATTGCCGGGCCCGCTTTCCAGATCTCATCCAGAAAGACAATTTCTGCTTCCGG‑CAGGTAACCGCTGGTTAAACGTTCATAGCGCCCT‑TCATCTTTTAGCGCCTGAATAGAAAGGGGACCAAAAACTTCTTCCGGCGTGGAGAAGCGGGTCATCAGATATTCAAACGCGCGGGCATTCTGAAAGGCGAATTTTAAGCGCCGGGCGATCAAACTTTTGGCAATA > NZ_CP009273/3923831‑3924307 | gtgACCTGCAAGGCATCAGGAACCGGATTGTCGTTTTCATCCTGTTGACTGGTCAGCATGGAGCGGAAATTCGCTTTATCCTGCACTTTATCTAACCACAGACGAATCAGCATGCGGTCATATAACGCTTCCAGACTGCTGTCTGCTTCCGGCAGCTCGTTGGAGGCCGCCACCAGCAGACGCATCGGGA‑TTTTTTCTACGTGTGCACCGTTGCGGAACTGGCGCTCGTTAATGGCGGATAGAAAGGAAt > 2:288030/1‑250 (MQ=255) tgACCTGCAAGGCATCAGGAACCGGATTGTCGTTTTCATCCTGTTGACTGGTCAGCATGGAGCGGAAATTCGCTTTATCCTGCACTTTATCTAACCACAGACGAATCAGCATGCGGTCATATAACGCTTCCAGACTGCTGTCTGCTTCCGGCAGCTCGTTGGAGGCCGCCACCAGCAGACGCATCGGGA‑TTTTTTCTACGTGTGCACCGTTGCGGAACTGGCGCTCGTTAATGGCGGTGAGCAAGGt < 1:375984/247‑1 (MQ=255) tgACCTGCAAGGCATCAGGAACCGGATTGTCGTTTTCATCCTGTTGACTGGTCAGCATGGAGCGGAAATTCGCTTTATCCTGCACTTTATCTAACCACAGACGAATCAGCATGCGGTCATATAACGCTTCCAGACTGCTGTCTGCTTCCGGCAGCTCGTTGGAGGCCGCCACCAGCAGACGCATCGGGA‑TTTTTTCTACGTGTGCACCGTTGCGGAACTGGCGCTCGTTAATGGCGGTGAGCAAGGTAt < 1:512488/249‑1 (MQ=255) gACCTGCAAGGCATCAGGAACCGGATTGTCGTTTTCATCCTGTTGACTGGTCAGCATGGAGCGGAAATTCGCTTTATCCTGCACTTTATCTAACCACAGACGAATCAGCATGCGGTCATATAACGCTTCCAGACTGCTGTCTGCTTCCGGCAGCTCGTTGGAGGCCGCCACCAGCAGACGCATCGGGA‑TTTTTTCTACGTGTGCACCGTTGCGGAACTGGCGCTCGTTAATGGCGGTGAGCAAGGGAtt > 1:605776/1‑249 (MQ=255) tGCAAGGCATCAGGAACCGGATTGTCGTTTTCATCCTGTTGACTGGTCAGCATGGAGCGGAAATTCGCTTTATCCTGCACTTTATCTAACCACAGACGAATCAGCATGCGGTCATATAACGCTTCCAGACTGCTGTCTGCTTCCGGCAGCTCGTTGGAGGCCGCCACCAGCAGACGCATCGGGA‑TTTTTTCTACGTGTGCACCGTTGCGGAACTGGCGCTCGTTAATGGCGGTGAGCAAGGGATTAAGa > 1:431091/1‑249 (MQ=255) cAAGGCATCAGGAACCGGATTGTCGTTTTCAGCCGGGTGAGTGGTCAGCATGGAGCGGAAATTCGCTTTATCCTGCACTTTATCTAACCACAGACGAATCAGCATGCGGTCATATAACGCTTCCAGACTGCTGTCTGCTGCCGGCAGCTCGTTGGAGGCCGCCACCAGCAGACGCATCGGGA‑TTGTTTCTACGTGTGCACCGTTGCGGAACTGGCGCTCGTTAATGGCGGTGAGCAAGGTATTAAGAAtt < 2:506821/250‑1 (MQ=255) ggCATCAGGAACCGGATTGTCGTTTTCATCCTGTTGACTGGTCAGCATGGAGCGGAAATTCGCTTTATCCTGCACTTTATCTAACCACAGACGAATCAGCATGCGGTCATATAACGCTTCCAGACTGCTGTCTGCTTCCGGCAGCTCGTTGGAGGCCGCCACCAGCAGACGCATCGGGA‑TTTTTTCTACGTGTGCACCGTTGCGGAACTGGCGCTCGTTAATGGCGGTGAGCAAGGTATTAAGAATTGcc > 2:90634/1‑250 (MQ=255) aGGAACCGGATTGTCGTTTTCATCCTGTTGACTGGTCAGCATGGAGCGGAAATTCGCTTTATCCTGCACTTTATCTAACCACAGACGAATCAGCATGCGGTCATATAACGCTTCCAGACTGCTGTCTGCTTCCGGCAGCTCGTTGGAGGCCGCCACCAGCAGACGCATCGGGA‑TTTTTTCTACGTGTGCACCGTTGCGGAACTGGCGCTCGTTAATGGCGGTGAGCAAGGTATTTAGAAATGCCGGGgcc > 1:567199/1‑250 (MQ=255) gATTGTCGTTTTCATCCTGTTGACTGGTCAGCATGGAGCGGAAATTCGCTTTATCCTGCACTTTATCTAACCACAGACGAATCAGCATGCGGTCATATAACGCTTCCAGACTGCTGTCTGCTTCCGGCAGCTCGTTGGAGGCCGCCACCAGCAGACGCATCGGGA‑TTTTTTCTACGTGTGCACCGTTGCGGAACTGGCGCTCGTTAATGGCGGTGAGCAAGGGATTAAGAATTGCCGGGCCCGCGTTc > 2:387599/1‑248 (MQ=255) tttCATCCTGTTGACTGGTCAGCATGGAGCGGAAATTCGCTTTATCCTGCACTTTATCTAACCACAGACGAATCAGCATGCGGTCATATAACGCTTCCAGACTGCTGTCTGCTTCCGGCAGCTCGTTGGAGGCCGCCACCAGCAGACGCATCGGGA‑TTTTTTCTACGTGTGCACCGTTGCGGAACTGGCGCTCGTTAATGGCGGTGAGCAAGGTATTAAGAATTGCCGGGCCCGCTTTCCAGATCTCATc > 1:127535/1‑250 (MQ=255) ttCATCCTGTTGACTGGTCAGCATGGAGCGGAAATTCGCTTTATCCTGCACTTTATCTAACCACAGACGAATCAGCATGCGGTCATATAACGCTTCCAGACTGCTGTCTGCTTCCGGCAGCTCGTTGGAGGCCGCCACCAGCAGACGCATCGGGA‑TTTTTTCTACGTGTGCACCGTTGCGGAACTGGCGCTCGTTAATGGCGGTGAGCAAGGTATTAAGAAATTCCGGGGCCCCCTTCCCGAAGTCATcc > 2:444444/1‑250 (MQ=255) tGTTGACTGGTCAGCATGGAGCGGAAATTCGCTTTATCCTGCACTTTATCTAACCACAGACGAATCAGCATGCGGTCATATAACGCTTCCAGACTGCTGTCTGCTTCCGGCAGCTCGTTGGAGGCCGCCACCAGCAGACGCATCGGGA‑TTTTTTCTACGTGTGCACCGTTGCGGAACTGGCGCTCGTTAATGGCGGTGAGGAAGGGATTAAGAATTTGCGGGCCCGCCTTTCAGATCTCATTCCGaaaa > 2:6097/1‑248 (MQ=255) ttGACTGGTCAGCATGGAGCGGAAATTCGCTTTATCCTGCACTTTATCTAACCACAGACGAATCAGCATGCGGTCATATAACGCTTCCAGACTGCTGTCTGCTTCCGGCAGCTCGTTGGAGGCCGCCACCAGCAGACGCATCGGGA‑TTTTTTCTACGTGTGCACCGTTGCGGAACTGGCGCTCGTTAATGGCGGTGAGCAAGGTATTAAGAATTGCCGGGCCCGCTTTCCAGATCTCATCCAGAAAGACa < 2:127313/250‑1 (MQ=255) ggTCAGCATGGAGCGGAAATTCGCTTTATCCTGCACTTTATCTAACCACAGACGAATCAGCATGCGGTCATATAACGCTTCCAGACTGCTGTCTGCTTCCGGCAGCTCGTTGGAGGCCGCCACCAGCAGACGCATCGGGA‑TTTTTTCTACGTGTGCACCGTTGCGGAACTGGCGCTCGTTAATGGCGGTGAGCAAGGGATTAAGAATTGCCGGGCCCGCTTTCCAGATCTCATCCAGAAAGACAATTTCt > 1:209410/1‑250 (MQ=255) gCGGAAATTCGCTTTATCCTGCACTTTATCTAACCACAGACGAATCAGCATGCGGTCATATAACGCTTCCAGACTGCTGTCTGCTTCCGGCAGCTCGTTGGAGGCCGCCACCAGCAGACGCATCGGGA‑TTTTTTCTACGTGTGCACCGTTGCGGAACTGGCGCTCGTTAATGGCGGTGAGCAAGGTATTAAGAATTGCCGGGCCCGCTTTCCAGATCTCATCCAGAAAGACAATTTCTGCTTCCGG‑CAgg < 2:234484/250‑1 (MQ=255) aaaTTCGCTTTATCCTGCACTTTATCTAACCACAGACGAATCAGCATGCGGTCATATAACGCTTCCAGACTGCTGTCTGCTTCCGGCAGCTCGTTGGAGGCCGCCACCAGCAGACGCATCGGGA‑TTTTTTCTACGTGTGCACCGTTGCGGAACTGGCGCTCGTTAATGGCGGTGAGCAAGGTATTAAGAATTGCCGGGCCCGCTTTCCAGATCTCATCCAGAAAGACAATTTCTGCTTCCGG‑CAGGTAAc < 2:149330/250‑1 (MQ=255) aaTTCGCTTTATCCTGCACTTTATCTAACCACAGACGAATCAGCATGCGGTCATATAACGCTTCCAGACTGCTGTCTGCTTCCGGCAGCTCGTTGGAGGCCGCCACCAGCAGACGCATCGGGA‑TTTTTTCTACGTGTGCACCGTTGCGGAACTGGCGCTCGTTAATGGCGGTGAGCAAGGTATTAAGAATTGCCGGGCCCGCTTTCCAGATCTCATCCAGAAAGACAATTTCTGCTTCCGG‑CAGGTAAcc < 1:199564/250‑1 (MQ=255) aTTCGCTTTATCCTGCACTTTATCTAACCACAGACGAATCAGCATGCGGTCATATAACGCTTCCAGACTGCTGTCTGCTTCCGGCAGCTCGTTGGAGGCCGCCACCAGCAGACGCATCGGGA‑TTTTTTCTACGTGTGCACCGTTGCGGAACTGGCGCTCGTTAATGGCGGTGAGCAAGGTATTAAGAATTGCCGGGCCCGCTTTCCAGATCTCATCCAGAAAGACAATTTCTGCTTCCGG‑CAGGTAACCg < 1:220856/250‑1 (MQ=255) aTTCGCTTTATCCTGCACTTTATCTAACCACAGACGAATCAGCATGCGGTCATATAACGCTTCCAGACTGCTGTCTGCTTCCGGCAGCTCGTTGGAGGCCGCCACCAGCAGACGCATCGGGA‑TTTTTTCTACGTGTGCACCGTTGCGGAACTGGCGCTCGTTAATGGCGGTGAGCAAGGTATTAAGAATTGCCGGGCCCGCTTTCCAGATCTCATCCAGAAAGACAATTTCTGCTTCCGG‑CAGGTAACCg < 1:458627/250‑1 (MQ=255) cGCTTTATCCTGCACTTTATCTAACCACAGACGAATCAGCATGCGGTCATATAACGCTTCCAGACTGCTGTCTGCTTCCGGCAGCTCGTTGGAGGCCGCCACCAGCAGACGCATCGGGA‑TTTTTTCTACGTGTGCACCGTTGCGGAACTGGCGCTCGTTAATGGCGGTGAGCAAGGTATTAAGAATTGCCGGGCCCGCTTTCCAGATCTCATCCAGAAAGACAATTTCTGCTTCCGG‑CAGGTAACCGCt < 2:96428/249‑1 (MQ=255) ttATCCTGCACTTTATCTAACCACAGACGAATCAGCATGCGGTCATATAACGCTTCCAGACTGCTGTCTGCTTCCGGCAGCTCGTTGGAGGCCGCCACCAGCAGACGCATCGGGA‑TTTTTTCTACGTGTGCACCGTTGCGGAACTGGCGCTCGTTAATGGCGGTTAGCAAGGGATTAAAAATTTCCGGGCCCGCTTTTCCAATCTCATCCCGAAAAACAAATTCTGCTTCCGG‑CACGGGACCGCTgggt > 2:389087/1‑247 (MQ=255) tATCCTGCACTTTATCTAACCACAGACGAATCAGCATGCGGTCATATAACGCTTCCAGACTGCTGTCTGCTTCCGGCAGCTCGTTGGAGGCCGCCACCAGCAGACGCATCGGGA‑TTTTTTCTACGTGTGCACCGTTGCGGAACTGGCGCTCGTTAATGGCGGTTAGCAAGGGATTTAGAATTTCCGGGCCCGCTTTCCAGATCTCCTCCACACAAACAAATTCTGCTTCCGG‑GAGTGAACCGCCGGGTa > 2:533513/1‑249 (MQ=255) tCCTGCACTTTATCTAACCACAGACGAATCAGCATGCGGTCATATAACGCTTCCAGACTGCTGTCTGCTTCCGGCAGCTCGTTGGAGGCCGCCACCAGCAGACGCATCGGGA‑TTTTTTCTACGTGTGCACCGTTGCGGAACTGGCGCTCGTTAATGGCGGTGAGCAAGGGAATAAGAATTGCCGGGCCCGCCTTCCAGATCTCATCCAGAAAGACAAATTCTGCTTCCGG‑CCGGTAACCGCCGGTTAAAc > 2:209563/1‑250 (MQ=255) tttATCTAACCACAGACGAATCAGCATGCGGTCATATAACGCTTCCAGACTGCTGTCTGCTTCCGGCAGCTCGTTGGAGGCCGCCACCAGCAGACGCATCGGGA‑TTTTTTCTACGTGTGCACCGTTGCGGAACTGGCGCTCGTTAATGGCGGTGAGCAAGGTATTAAGAATTGCCGGGCCCGCTTTCCAGATCTCATCCAGAAAGACAATTTCTGCTTCCGG‑CAGGTAACCGCTGGTTAAACGTTCATAg > 1:520161/1‑250 (MQ=255) tAACCACAGACGAATCAGCATGCGGTCATATAACGCTTCCAGACTGCTGTCTGCTTCCGGCAGCTCGTTGGAGGCCGCCACCAGCAGACGCATCGGGA‑TTTTTTCTACGTGTGCACCGTTGCGGAACTGGCGCTCGTTAATGGCGGTGAGCAAGGTATTAAGAAATGCCGGGCCCGCTTTTCAGATCTTATCCATAAAGACAAATTCTGGTTCTGG‑CAGGTCACCGCCGGGTAAACGATCATAGCGCCCt > 1:450464/1‑250 (MQ=255) cgcaGACGAATCAGCATGCGGTCATATAACGCTTCCAGACTGCTGTCTGCTTCCGGCAGCTCGTTGGAGGCCGCCACCAGCAGACGCATCGGGA‑TTTTTTCTACGTGTGCACCGTTGCGGAACTGGCGCTCGTTAATGGCGGTGAGCAAGGTATTAAGAATTGCCGGGCCCGCTTTCCAGATCTCATCCAGAAAGACAATTTCTGCTTCCGG‑CAGGTAACCGCTGGTTAAACGTTCATAGCGCCCT‑TCAt < 1:554815/248‑1 (MQ=255) acaGACGAATCAGCATGCGGTCATATAACGCTTCCAGACTGCTGTCTGCTTCCGGCAGCTCGTTGGAGGCCGCCACCAGCAGACGCATCGGGA‑TTTTTTCTACGTGTGCACCGTTGCGGAACTGGCGCTCGTTAATGGCGGTGAGCAAGGGATTTAGAATTGCCGGGCCCGCTTTCCAGATCTCATCCAGAAAGAAAATTTCTGCCTCCGG‑CCGGGAACCGCTGGTTAAACGTTCATAGCGCCCT‑TCATc > 1:594552/1‑250 (MQ=255) gACGAATCAGCATGCGGTCATATAACGCTTCCAGACTGCTGTCTGCTTCCGGCAGCTCGTTGGAGGCCGCCACCAGCAGACGCATCGGGA‑TTTTTTCTACGTGTGCACCGTTGCGGAACTGGCGCTCGTTAATGGCGGTGAGCAAGGGATTAAGAATTGCCGGGCCCGCTTTCCAGATCTCATCCAGAAAGACAATTTCTGCTTCCGG‑CAGGTAACCGCTGGTTAAACGTTCATAGCGCCCT‑TCATCttt > 1:75922/1‑250 (MQ=255) gACGAATCAGCATGCGGTCATATAACGCTTCCAGACTGCTGTCTGCTTCCGGCAGCTCGTTGGAGGCCGCCACCAGCAGACGCATCGGGA‑TTTTTTCTACGTGTGCACCGTTGCGGAACTGGCGCTCGTTAATGGCGGTGAGCAAGGGATTAAGAATTGCCGGGCCCGCTTTCCAGATCTCATCCAGAAAGACAATTTCTGCTTCCGG‑CAGGGAACCGCCGGGTAAACGGTCATAGCGCCCC‑TCCTCttt > 2:302634/1‑250 (MQ=255) aCGAATCAGCATGCGGTCATATAACGCTTCCAGACTGCTGTCTGCTTCCGGCAGCTCGTTGGAGGCCGCCACCAGCAGACGCATCGGGA‑TTTTTTCTACGTGTGCACCGTTGCGGAACTGGCGCTCGTTAATGGCGGTGAGCAAGGTATTAAGAATTGCCGGGCCCGCTTTCCAGATCTCATCCAGAAAGACAATTTCTGCTTCCGG‑CAGGTAACCGCTGGTTAAACGTTCATAGCGCCCT‑TCATCtttt < 1:432150/250‑1 (MQ=255) gAATCAGCATGCGGTCATATAACGCTTCCAGACTGCTGTCTGCTTCCGGCAGCTCGTTGGAGGCCGCCACCAGCAGACGCATCGGGA‑TTTTTTCTACGTGTGCACCGTTGCGGAACTGGCGCTCGTTAATGGCGGTGAGCAAGGGATTAAGAATTGCCGGGCCCGCTTTCCAGATCTCATCCAGAAAGACAATTTCTGCTTCCGG‑CAGGTAAACGCTGGTTAAACGGTCATAGCGCCCT‑TCATCTTTTAg > 1:75508/1‑250 (MQ=255) gAATCAGCATGCGGTCATATAACGCTTCCAGACTGCTGTCTGCTTCCGGCAGCTCGTCGGAGGCCGCCACCAGCAGACGCATCGGGA‑TTTTTTCTACGTGTGCACCGTTGCGGAACTGGCGCTCGTTAATGGCGGTGAGCAAGGTATTAAGAATTGCCGGGCCCGCTTTCCAGATCTCATCCAGAAAGACAATTTCTGCTTCCGG‑CAGGTAACCGCTGGTTAAACGTTCATAGCGCCCT‑TCATCTTTTAg < 2:171359/250‑1 (MQ=255) gCATGCGGTCATATAACGCTTCCAGACTGCTGTCTGCTTCCGGCAGCTCGTTGGAGGCCGCCACCAGCAGACGCATCGGGA‑TTTTTTCTACGTGTGCACCGTTGCGGAACTGGCGCTCGTTAATGGCGGTGAGCAAGGTATTAAGAATTGCCGGGCCCGCTTTCCAGATCTCATCCAGAAAGACAATTTCTGCTTCCGG‑CAGGTAACCGCTGGTTAAACGTTCATAGCGCCCT‑TCATCTTTTAGCGCCTg < 1:362946/250‑1 (MQ=255) cATGCGGTCATATAACGCTTCCAGACTGCTGTCTGCTTCCGGCAGCTCGTTGGAGGCCGCCACCAGCAGACGCATCGGGA‑TTTTTTCTACGTGTGCACCGTTGCGGAACTGGCGCTCGTTAATGGCGGTGAGCAAGGTATTAAGAATTTCCGGGCCCGCTTTCCAGATCTCATCCAGAAAGACAATTTCTGCTTCCGG‑CAGGTAACCGCTGGTTAAACGTTCATAGCGCCCT‑TCCTCTTTTAGCGCCTg > 1:582740/1‑249 (MQ=255) ggTCATATAACGCTTCCAGACTGCTGTCTGCTTCCGGCAGCTCGTTGGAGGCCGCCACCAGCAGACGCATCGGGA‑TTTTTTCTACGTGTGCACCGTTGCGGAACTGGCGCTCGTTAATGGCGGTGAGCAAGGTATTAAGAATTGCCGGGCCCGCTTTCCAGATCTCATCCAGAAAGACAATTTCTGCTTCCGG‑CAGGTAACCGCTGGTTAAACGTTCATAGCGCCCT‑TCATCTTTTAGCGCCTGAATAGa < 1:267554/250‑1 (MQ=255) gTCATATAACGCTTCCAGACTGCTGTCTGCTTCCGGCAGCTCGTTGGAGGCCGCCACCAGCAGACGCATCGGGA‑TTTTTTCTACGTGTGCACCGTTGCGGAACTGGCGCTCGTTAATGGCGGTGAGCAAGGTATTAAGAATTGCCGGGCCCGCTTTCCAGATCTCATCCAGAAAGACAATTTTTGCTTCCGG‑CAGGGGACCGCTGGTTAAACGTTCATAGCGCCCT‑TCATCTTTTAGCGCCCGAATAGa > 2:548975/1‑249 (MQ=255) atatAACGCTTCCAGACTGCTGTCTGCTTCCGGCAGCTCGTTGGAGGCCGCCACCAGCAGACGCATCGGGA‑TTTTTTCTACGTGTGCACCGTTGCGGAACTGGCGCTCGTTAATGGCGGTGAGCAAGGTATTAAGAATTGCCGGGCCCGCTTTCCAGATCTCATCCAGAAAGACAATTTCTGCTTCCGG‑CAGGTAACCGCTGGTTAAACGTTCATAGCGCCCT‑TCATCTTTTAGCGCCTGAATAGAAAg < 1:230968/249‑1 (MQ=255) taACGCTTCCAGACTGCTGTCTGCTTCCGGCAGCTCGTTGGAGGCCGCCACCAGCAGACGCATCGGGA‑TTTTTTCTACGTGTGCACCGTTGCGGAACTGGCGCTCGTTAATGGCGGTGAGCAAGGTATTAAGAATTGCCGGGCCCGCTTTCCAGATCTCATCCAGAAAGACAATTTCTGCTTCCGG‑CAGGTAACCGCTGGTTAAACGTTCATAGCGCCCT‑TCATCTTTTAGCGCCTGAATAGAAAgggg < 2:361123/249‑1 (MQ=255) taACGCTTCCAGACTGCTGTCTGCTTCCGGCAGCTCGTTGGAGGCCGCCACCAGCAGACGCATCGGGA‑TTTTTTCTACGTGTGCACCGTTGCGGAACTGGCGCTCGTTAATGGCGGTGAGCAAGGGATTAAGAATTGCCGGGCCCGCTTTCCAGATCTCCTCCAGGAAGACAATTTCTGCTTCCGGCCGGGAAACCCCTGGTTAAAC‑TTCATAACCCCCT‑TCCTCTTTTCTGGCCTGAATAACAAGGGGa > 2:192725/1‑250 (MQ=255) gCTTCCAGACTGCTGTCTGCTTCCGGCAGCTCGTTGGAGGCCGCCACCAGCAGACGCATCGGGA‑TTTTTTCTACGTGTGCACCGTTGCGGAACTGGCGCTCGTTAATGGCGGTGAGCAAGGTATTAAGAATTGCCGGGCCCGCTTTCCAGATCTCATCCAGAAAGACAATTTCTGCTTCCGG‑CAGGTAACCGCTGGTTAAACGTTCATAGCGCCCT‑TCATCTTTTAGCGCCTGAATAGAAAGGGGACCaa < 2:312865/250‑1 (MQ=255) tCCAGACTGCTGTCTGCTTCCGGCAGCTCGTTGGAGGCCGCCACCAGCAGACGCATCGGGA‑TTTTTTCTACGTGTGCACCGTTGCGGAACTGGCGCTCGTTAATGGCGGTGGGCAAGGGATTAAGAATTGCCGGGGCCGCTTTCCAGATCTCCTCCAGAAAAAAAATTTTTGCTTTCCG‑CCGGGAAACGCTGGGTAAAAGTTTATAGCGCCCT‑TTCTCTTTTAGCTCCCGGATAGAAAGGGGGCAaaaa > 2:533582/1‑249 (MQ=255) cAGACTGCTGTCTGCTTCCGGCAGCTCGTTGGAGGCCGCCACCAGCAGACGCATCGGGA‑TTTTTTCTACGTGTGCACCGTTGCGGAACTGGCGCTCGTTAATGGCGGTGAGCAAGGGATTAAGAATTGCCGGGGCCGCTTTCCAGATTTTATCCAGAAAGACAAATTTTGCTTCCGG‑CAGGGAACCGCTGGTTAAAAGGTCATAGCGCCCT‑TCATCTTTTTGCGCCCGAATAAAAAGGGGGCCaaaaaat > 2:320761/1‑248 (MQ=255) ctgctgTCTGCTTCCGGCAGCTCGTTGGAGGCCGCCACCAGCAGACGCATCGGGA‑TTTTTTCTACGTGTGCACCGTTGCGGAACTGGCGCTCGTTAATGGCGGTGAGCCAGGGATTTAGAATTGCCGGGGCCGCTTTCCAGATCTCATCCAGAAAGACAATTTTTGCTTCCGG‑CCGGGAACCGCTGGTTGAACGTTCATAGAGCCCC‑TCATCTTTTTGCGCCCGAATAGAAAGGGGGCCAAAAAattctt > 2:424538/1‑250 (MQ=255) ctgctgTCTGCTTCCGGCAGCTCGTTGGAGGCCGCCACCAGCAGACGCATCGGGA‑TTTTTTCTACGTGTGCACCGTTGCGGAACTGGCGCTCGTTAATGGCGGTGAGCAAGGTATTAAGAATTGCCGGGCCCGCTTTCCAGATCTCATCCAGAAAGACAATTTCTGCTTCCGG‑CAGGTAACCGCTGGTTAAACGTTCATAGCGCCCT‑TCATCTTTTAGCGCCTGAATAGAAAGGGGACCAAAAActtctt < 1:385922/250‑1 (MQ=255) ctgTCTGCTTCCGGCAGCTCGTTGGAGGCCGCCACCAGCAGACGCATCGGGA‑TTTTTTCTACGTGTGCACCGTTGCGGAACTGGCGCTCGTTAATGGCGGTGAGCAAAGGATTAAGAATTGCCGGGCCCGCTTTTCAGATTTCATCCAGAAAGACAAATTGTGCTTCCCG‑CAGGCAACCGCTGGTGACAAATTACTAGCGCCCTCTCTTC‑TTTAGCGCCTGAATAGAAAGGGGGCCAAAAAcgtctttct > 2:564174/1‑247 (MQ=255) cTGCTTCCGGCAGCTCGTTGGAGGCCGCCACCAGCAGACGCATCGGGA‑TTTTTTCTACGTGTGCACCGTTGCGGAACTGGCGCTCGTTAATGGCGGTGAGCAAGGGATTAAAAATTTCCGGGCCCGCTTTCCAGATCTCATCCCGGAAGACAATTTCTTCTTCCCG‑CAGGTGACCGCTGGTTAAAAGTTCAAAGGGCCCT‑TCATCTTTTTGCGCCTGAATAGAAAAGGGGCCAAAAAATTCTTCCcgcgc > 2:300363/1‑249 (MQ=255) cTTCCGGCAGCTCGTTGGAGGCCGCCACCAGCAGACGCATCGGGA‑TTTTTTCTACGTGTGCACCGTTGCGGAACTGGCGCTCGTTAATGGCGGTGAGCAAGGTATTAAGAATTGCCGGGCCCGCTTTCCAGATCTCATCCAGAAAGACAATTTCTGCTTCCGG‑CAGGTAACCGCTGGTTAAACGTTCATAGCGCCCT‑TCATCTTTTAGCGCCTGAATAGAAAGGGGACCAAAAACTTCTTCCGGCGTg < 1:210610/248‑1 (MQ=255) ccGGCAGCTCGTTGGAGGCCGCCACCAGCAGACGCATCGGGA‑TTTTTTCTACGTGTGCACCGTTGCGGAACTGGCGCTCGTTAATGGCGGTGAGCAAGGTATTAAGAATTGCCGGGCCCGCTTTCCAGATCTCATCCAGAAAGACAATTTCTGCTTCCGG‑CAGGTAACCGCTGGTTAAACGTTCATAGCGCCCT‑TCATCTTTTAGCGCCTGAATAGAAAGGGGACCAAAAACTTCTTCCGGCGTGgag < 2:339673/248‑1 (MQ=255) ccGGCAGCTCGTTGGAGGCCGCCACCAGCAGACGCATCGGGA‑TTTTTTCTACGTGTGCACCGTTGCGGAACTGGCGCTCGTTAATGGCGGTGAGCAAGGGATTAAGAATTTCCTGGGCCGCTTTCCCGATCTCCTCCAGAAAGACAATTTCTGCTTTCCG‑CAGGTAACCGCTGGTTTAACGTTCATAGCGCCCT‑TCATCTTTTTGCGCCTGGATAAAAAGGGGACCCAAAACTTCTTTCCGCGTgggg > 1:298834/1‑246 (MQ=255) cGGCAGCTCGTTGGAGGCCGCCACCAGCAGACGCATCGGGA‑TTTTTTCTACGTGTGCACCGTTGCGGAACTGGCGCTCGTTAATGGCGGTGAGCAAGGTATTAAGAATTGCCGGGCCCGCTTTCCAGATCTCATCCAGAAAGACAATTTCTGCTTCCGG‑CAGGTAACCGCTGGTTAAACGTTCATAGCGCCCT‑TCATCTTTTAGCGCCTGAATAGAAAGGGGACCAAAAACTTCTTCCGGCGTGGAGAAg < 1:591215/250‑1 (MQ=255) cAGCTCGTTGGAGGCCGCCACCAGCAGACGCATCGGGATTTTTTTCTACGTGTGCACCGTTGCGGAACTGGCGCTCGTTAATGGCGGTGAGCAAGGTATTAAGAATTGCCGGGCCCGCTTTCCAGATCTCATCCAGAAAGACAATTTCTGCTTCCGG‑CAGGTAACCGCTGGTTAAACGTTCATAGCGCCCT‑TCATCTTTTAGCGCCTGAATAGAAAGGGGACCAAAAACTTCTTCCGGCGTGGAGAAGCg < 1:27119/250‑1 (MQ=255) gTTGGAGGCCGCCACCAGCAGACGCATCGGGA‑TTTTTTCTACGTGTGCACCGTTGCGGAACTGGCGCTCGTTAATGGCGGTGAGCCAGGAATTAAGAACTGCCGGGGCCGGTTTTCAGATCTCATCCAGAAAAAAACTTTTTTATTTCCG‑CAGGGAACCGCGGGTTTAACGCTCATAGCGCCCT‑CTATCTTTTAGCGCCTGAATAGAAAGAGGACCAAAAAATTCTTCCGGCGTGGGGCAGCGGGtgctc > 2:461077/1‑246 (MQ=255) agcgcccctccaGCAGACGCATCGGGA‑TTGATTCTTCGTGTGAACCGTTTCGGAACTGGCGCTAGTTAATGGCGGTGAGCAAGGTATTAAGAATTGCCGGGACCGCTTTCCAGATCTCATCCAGTAAGACAATTTCTGCTTCCGG‑CAGGTAGCCGCTGGTTAAACGTTCATAGCGCCCT‑TCATCCTTTAACGCCTGAATAGAAAGGGGACCAAAAACTTCTTCCGGCATGGAGAAGCGGGTCATCAGata < 2:403532/241‑1 (MQ=255) aGGCCGCCACCAGCAGACGCATCGGGA‑TTTTTTCTACGTGTGCACCGTTGCGGAACTGGCGCTCGTTAATGGCGGTGAGCCAGGGATTAAGAATTGCCGGGGCCGCTTTCCAGATCTCCTCCAGAAAGACAATTTCTGCTTTCGG‑CAGGGAAACGCTGGTTAAACGTTCATAGCGCCCT‑TCCTCTTTTAGCGCCTGAATAGAAAAGGGGACAAAAACCTCTTCCGGCGTGGAGAAAAGGGTGATCAGata > 2:341355/1‑250 (MQ=255) accaGCAGACGCATCGGGA‑TTTTTTCTACGTGTGCACCGTTGCGGAACTGGCGCTCGTTAATGGCGGTGAGCAAAGGATTAAGAATTGCCGGGCCCGCTTTCCCGATCTCATCCAGAAAGACAAATTCTGCTTCCGG‑CAGGGAACCGCTGGTTAAACGTTCATAGCGCCCT‑TCCTCTTTTAGCGCCCGAATAGAAAGGGGACCAAAAACTTCTTCCGGCGTGGAGGAGCGGGTCATCAGATAATCAAAcg > 2:67287/1‑250 (MQ=255) agcagACGCATCGGGA‑TTTTTTCTACGTGTGCACCGTTGCGGAACTGGCGCTCGTTAATGGCGGTGAGCAAGGTATTAAGAATTGCCGGGCCCGCTTTCCAGATCTCATCCAGAAAGACAATTTCTGCTTCCGG‑CAGGTAACCGCTGGTTAAACGTTCATAGCGCCCT‑TCATCTTTTAGCGCCTGAATAGAAAGGGGACCAAAAACTTCTTCCGGCGTGGAGAAGCGGGTCATCAGATATTCAAAcgcgc < 1:515925/250‑1 (MQ=255) gggA‑TTTTTTCTACGTGTGCACCGTTGCGGAACTGGCGCTCGTTAATGGCGGTGAGCAAGGTATTAAGAATTGCCGGGCCCGCTTTCCAGATCTCATCCAGAAAGACAATTTCTGCTTCCGG‑CAGGTAACCGCTGGTTAAACGTTCATAGCGCCCT‑TCATCTTTTAGCGCCTGAATAGAAAGGGGACCAAAAACTTCTTCCGGCGTGGAGAAGCGGGTCATCAGATATTCAAACGCGCGGGCATTCTGaa < 2:101990/250‑1 (MQ=255) ttttttCTACGTGTGCACCGTTGCGGAACTGGCGCTCGTTAATGGCGGTGAGCAAGGTATTAAGAATTGCCGGGCCCGCTTTCCAGATCTCATCCAGAAAGACAATTTCTGCTTCCGG‑CAGGTAACCGCTGGTTAAACGTTCATAGCGCCCT‑TCATCTTTTAGCGCCTGAATAGAAAGGGGACCAAAAACTTCTTCCGGCGTGGAGAAGCGGGTCATCAGATATTCAAACGCGCGGGCATTCTGAAAGGc < 2:253222/250‑1 (MQ=255) cTACGTGTGCACCGTTGCGGAACTGGCGCTCGTTAATGGCGGTGAGCAAGGTATTAAGAATTGCCGGGCCCGCTTTCCAGATCTCATCCAGAAAGACAATTTCTGCTTCCGG‑CAGGTAACCGCTGGTTAAACGTTCATAGCGCCCT‑TCATCTTTTAGCGCCTGAATAGAAAGGGGACCAAAAACTTCTTCCGGCGTGGAGAAGCGGGTCATCAGATATTCAAACGCGCGGGCATTCTGAAAGGCGAAtt < 2:127535/249‑1 (MQ=255) cGTGTGCACCGTTGCGGAACTGGCGCTCGTTAATGGCGGTGAGCAAGGTATTAAGAATTGCCGGGCCCGCTTTCCAGATCTCATCCAGAAAGACAATTTCTGCTTCCGG‑CAGGTAACCGCTGGTTAAACGTTCATAGCGCCCT‑TCATCTTTTAGCGCCTGAATAGAAAGGGGACCAAAAACTTCTTCCGGCGTGGAGAAGCGGGTCATCAGATATTCAAACGCGCGGGCATTCTGAAAGGCGAAttt < 2:164408/247‑1 (MQ=255) tgtgCACCGTTGCGGAACTGGCGCTCGTTAATGGCGGTGAGCAAGGTATTAAGAATTGCCGGGCCCGCTTTCCAGATCTCATCCAGAAAGACAATTTCTGCTTCCGG‑CAGGTAACCGCTGGTTAAACGTTCATAGCGCCCT‑TCATCTTTTAGCGCCTGAATAGAAAGGGGACCAAAAACTTCTTCCGGCGTGGAGAAGCGGGTCATCAGATATTCAAACGCGCGGGCATTCTGAAAGGCGAATTTTAAgc < 2:26418/250‑1 (MQ=255) tgCACCGTTGCGGAACTGGCGCTCGTTAATGGCGGTGAGCAAGGTATTAAGAATTGCCGGGCCCGCTTTCCAGATCTCATCCAGAAAGACAATTTCTGCTTCCGG‑CAGGTAACCGCTGGTTAAACGTTCATAGCGCCCT‑TCATCTTTTAGCGCCTGAATAGAAAGGGGACCAAAAACTTCTTCCGGCGTGGAGAAGCGGGTCATCAGATATTCAAACGCGCGGGCATTCTGAAAGGCGAATTTTAAgcg < 1:551080/249‑1 (MQ=255) cACCGTTGCGGAACTGGCGCTCGTTAATGGCGGTGAGCAAGGGATTAAGAATTGCCGGGCCCGCTTTCCCGATCTCATCCAGAAAGACAATTTCTGCTTCCGG‑CAGGGAACCGCTGGTTAAACGTTCATAGCGCCCT‑TCATCTTTTATCGCCTGAATAGAAAGGGGACCAAAAACTTTTTCCGGCGTGGAGAAGCGGGGCATCAGATATTCAAACGCGCGGGCCTTCTGAAAGGCGAATTTTAAGCGCCg > 1:268903/1‑250 (MQ=255) ccGTTGCGGAACTGGCGCTCGTTAATGGCGGTGAGCAAGGTATTAAGAATTGCCGGGCCCGCTTTCCAGATCTCATCCAGAAAGACAATTTCTGCTTCCGG‑CAGGTAACCGCTGGTTAAACGTTCATAGCGCCCT‑TCATCTTTTAGCGCCTGAATAGAAAGGGGACCAAAAACTTCTTCCGGCGTGGAGAAGCGGGTCATCAGATATTCAAACGCGCGGGCATTCTGAAAGGCGAATTTTAAGCGCCggg < 1:10076/250‑1 (MQ=255) cGTTGCGGAACTGGCGCTCGTTAATGGCGGTGAGCAAGGGATTAAGAATTGCCGGGCCCGCTTTCCAGATCTCATCCAGAAAGACAATTTCTGCTTCCGG‑CAGGTAACCGCTGGTTAAACGTTCATAGCGCCCT‑TCATCTTTTAGCGCCTGAATAGAAAGGGGACCAAAAACTTCTTCCGGCGGGGAGAAGCGGGTCATCAGATATTCAAACGCGCGGGCATTCTGAAAGGCGAATTTTAAGCGCCGGGc > 1:189218/1‑250 (MQ=255) gAACTGGCGCTAGTTAATGGCGGTGAGCAAGGTATTAAGAATTGCCGGGCCCGCTTTCCAGATCTCATCCAGAAAGACAATTTCTGCTTCCGG‑CAGGTAACCGCTGGTTAAACGTTCATAGCGCCCG‑TCATCTTTTAGCGCCTGAATAGAAAGGGGACCAAAAACTTCTTCCGGCGTGGAGAAGCGGGTCATCAGATATTCAAACGCGCGGGCATTCTGAAAGGCGAATTTTAAGCGCCGGGCGATCaaa < 2:243183/250‑1 (MQ=255) cgcTCGTTAATGGCGGTGAGCAAGGGATTAAGAATTTCCGGGCCCGCTTTCCAGATCTCATCCAGAAAGACAATTTCTGCTTCCGG‑CAGGTAACCGCTGGTTAAACGTTCATAGCGCCCT‑TCATCTTTTAGCGCCTGAATAGAAAGGGGACCAAAAACTTCTTCCGGCGGGGAGAAGCGGGTCATCAGATATTCAAACGCGCGGGCATTCTGAAAGGCGAATTTTAAGCGCCGGGCGATCAAACTTTTgg > 1:516710/1‑250 (MQ=255) gcTCGTTAATGGCGGTGGGGAAGGGATTTAGAATTTCCGGGGCCGCTTTTCAGATCTCATCCAGAAAGACAATTTTTGCTTCCGG‑CAGGGAACCGCTGGTTTAACGTTCCTAGCGCCCT‑TCATCTTTTAGCGCCTGAATAGAAAGGGGACCAAAAACTTCTTTCGGCGTGGAGAAGCGGGGCATCAGATATTCAAAAGCGCGGGCATTCTGAAAGGCGAATTTTAAACGCCCGGGGATCAAACtttttg > 2:419376/1‑247 (MQ=255) gTTAATGGCGGTGAGCAAGGTATTAAGAATTGCCGGGCCCGCTTTCCAGATCTCATCCAGAAAGACAATTTCTGCTTCCGG‑CAGGTAACCGCTGGTTAAACGTTCATAGCGCCCT‑TCATCTTTTAGCGCCTGAATAGAAAGGGGACCAAAAACTTCTTCCGGCGTGGAGAAGCGGGTCATCAGATATTCAAACGCGCGGGCATTCTGAAAGGCGAATTTTAAGCGCCGGGCGATCAAACTTTTGGCAATa < 1:90634/250‑1 (MQ=255) | GTGACCTGCAAGGCATCAGGAACCGGATTGTCGTTTTCATCCTGTTGACTGGTCAGCATGGAGCGGAAATTCGCTTTATCCTGCACTTTATCTAACCACAGACGAATCAGCATGCGGTCATATAACGCTTCCAGACTGCTGTCTGCTTCCGGCAGCTCGTTGGAGGCCGCCACCAGCAGACGCATCGGGA‑TTTTTTCTACGTGTGCACCGTTGCGGAACTGGCGCTCGTTAATGGCGGTGAGCAAGGTATTAAGAATTGCCGGGCCCGCTTTCCAGATCTCATCCAGAAAGACAATTTCTGCTTCCGG‑CAGGTAACCGCTGGTTAAACGTTCATAGCGCCCT‑TCATCTTTTAGCGCCTGAATAGAAAGGGGACCAAAAACTTCTTCCGGCGTGGAGAAGCGGGTCATCAGATATTCAAACGCGCGGGCATTCTGAAAGGCGAATTTTAAGCGCCGGGCGATCAAACTTTTGGCAATA > NZ_CP009273/3923831‑3924307 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |