| Read alignment evidence... | |||||||||||
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| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NZ_CP009273 | 1,009,488 | 0 | A | T | 42.5% | 57.6 / 17.1 | 41 | L258F (TTA→TTT) | pqiB | intermembrane transport protein PqiB |
| Reads supporting (aligned to +/- strand): ref base A (5/18); new base T (17/0); total (23/18) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 3.35e-07 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
| Rejected as consensus: Frequency below/above cutoff threshold. | |||||||||||
TGCTGTTCCGTGGCTATCGGGTAGGTTCGGTTGAAACCAGCACCTTCGATACACAAAAACGCAATATCAGCTATCAACTGTTCATCAATGCACCTTATGACCGACTGGTGACCAACAATGTTCGCTTCTGGAAAGATAGTGGCATTGCGGTTGATCTGACGTCAGCAGGGATGCGTGTGGAGATGGGCTCATTGACAACGCTGCTGAGTGGCGGTGTCAGCTTTGATGTGCCGGAAGGTCT‑GGATTTAGGGCAGCCAGTGGCA‑CCGAAAACAGCTTTCGTTTTGTATGATGATCAGAAGAGCATTCAGGATTCGTTGTACACCGATCACATTGATTATCTGATGTTCTTTAAAGATTCGGTACGCGGTCTG‑C‑AACCGGGAGCTCCGGTAGAGTTCCGGGGTATTCGCCTGGGTACCGTAAGCAAAGTGCCATTCTTTGCGCCGAATATGCGTCAGACATTTAACGATGATTACCGTATTCCGGTACTG > NZ_CP009273/1009241‑1009728 | tGCTGTTCCGTGGCTATCGGGTAGGTTCGGTTGAAACCAGCACCTTCGATACACAAAAACGCAATATCAGCTATCAACTGTTCATCAATGCACCTTATGACCGACTGGTGACCAACAATGTTCGCTTCTGGAAAGATAGTGGCATTGCGGTTGATCTGACGTCAGCAGGGATGCGTGTGGAGATGGGCTCATTGACAACGCTGCTGAGTGGCGGTGGCGGGTTTGTTGTTGCGGTAGGGCC‑GGATTTTgg > 2:272304/1‑250 (MQ=255) cTGTTCCGTGGCTATCGGGTAGGTTCGGTTGAAACCAGCACCTTCGATACACAAAAACGCAATATCAGCTATCAACTGTTCATCAATGCACCTTATGACCGACTGGTGACCAACAATGTTCGCTTCTGGAAAGATAGTGGCATTGCGGTTGATCTGACGTCAGCAGGGATGCGTGTGGAGATGGGCTCATTGACAACGCTGCTGAGTGGCGGTGTCAGCTTTGATGTGCCGGAAGGTCT‑GGATTTAggg < 2:413385/249‑1 (MQ=255) ttCCGTGGCTATCGGGTAGGTTCGGTTGAAACCAGCACCTTCGATACACAAAAACGCAATATCAGCTATCAACTGTTCATCAATGCACCTTATGACCGACTGGTGACCAACAATGTTCGCTTCTGGAAAGATAGTGGCATTGCGGTTGATCTGACGTCAGCAGGGATGCGTGTGGAGATGGGCTCATTGACAACGCTGCTGAGTGGCGGTGTCAGCTTTGATGTGCCGGAAGGTCT‑GGATTTAGGGCAg < 2:122420/249‑1 (MQ=255) ttCCGTGGCTATCGGGTAGGTTCGGTTGAAACCAGCACCTTCGATACACAAAAACGCAATATCAGCTATCAACTGTTCATCAATGCACCTTATGACCGACTGGTGACCAACAATGTTCGCTTCTGGAAAGATAGTGGCATTGCGGTTGATCTGACGTCAGCAGGGATGCGTGTGGAGATGGGCTCATTGACAACGCTGCTGAGTGGCGGTGTCAGCTTTGATGTGCCGGAAGGTCT‑GGATTTAGGGCAg < 1:323721/249‑1 (MQ=255) gCTATCGGGTAGGTTCGGTTGAAACCAGCACCTTCGATACACAAAAACGCAATATCAGCTATCAACTGTTCATCAATGCACCTTATGACCGACTGGTGACCAACAATGTTCGCTTCTGGAAAGATAGTGGCATTGCGGTTGATCTGACGTCAGCAGGGATGCGTGTGGAGATGGGCTCATTGACAACGCTGCTGAGTGGCGGTGTCAGCTTTGATGTGCCGGAAGGTCT‑GGATTTAGGGCAGCCAGTGGc < 2:534741/250‑1 (MQ=255) aaCCAGCACCTTCGATACACAAAAACGCAATATCAGCTATCAACTGTTCATCAATGCACCTTATGACCGACTGGTGACCAACAATGTTCGCTTCTGGAAAGATAGTGGCATTGCGGTTGATCTGACGTCAGCAGGGATGCGTGTGGAGATGGGCTCATTGACAACGCTGCTGAGTGGCGGTGTTCGCTTTGATGTGCCGGGAGGGCA‑GGGTTTTGGGGAGCCAGGGGCA‑CCGGAAACAGCttttgttttg > 1:197537/1‑250 (MQ=255) cAGCACCTTCGATACACAAAAACGCAATATCAGCTATCAACTGTTCATCAATGCACCTTATGACCGACTGGTGACCAACAATGTTCGCTTCTGGAAAGATAGTGGCATTGCGGTTGATCTGACGTCAGCAGGGATGCGTGTGGAGATGGGCTCATTGACAACGCTGCTGAGTGGCGGTGGCCGGTTTTATGTGCCGGGAGGGCT‑GGGTTTTGGGGAGGCCGGGGGA‑ACGGAAACAGGTTTTGGTTTTTat > 1:541572/1‑250 (MQ=255) aGCACCTTCGATACACAAAAACGCAATATCAGCTATCAACTGTTCATCAATGCACCTTATGACCGACTGGTGACCAACAATGTTCGCTTCTGGAAAGATAGTGGCATTGCGGTTGATCTGACGTCAGCAGGGATGCGTGTGGAGATGGGCTCATTGACAACGCTGCTGAGTGGCGGTGTCAGCTTTGATGTGCCGGAAGGTCT‑GGATTTAGGGCAGCCAGTGGCA‑CCGAAAACAGCTTTCGTTTTGTatg < 2:368148/250‑1 (MQ=255) aaaaCGCAATATCAGCTATCAACTGTTCATCAATGCACCTTATGACCGACTGGTGACCAACAATGTTCGCTTCTGGAAAGATAGTGGCATTGCGGTTGATCTGACGTCAGCAGGGATGCGTGTGGAGATGGGCTCATTGACAACGCTGCTGAGTGGCGGTGTCAGCTTTGATGTGCCGGAAGGTCT‑GGATTTAGGGCAGCCAGTGGCA‑CCGAAAACAGCTTTCGTTTTGTATGATGATCAGAAGAGCAtt < 1:431035/250‑1 (MQ=255) cGCAATATCAGCTATCAACTGTTCATCAATGCACCTTATGACCGACTGGTGACCAACAATGTTCGCTTCTGGAAAGATAGTGGCATTGCGGTTGATCTGACGTCAGCAGGGATGCGTGTGGAGATGGGCTCATTGACAACGCTGCTGAGTGGCGGTGTCCGGTTTGATGGGGCGGAAGGGGT‑GGTGGTTGGGGAGGCAGGGGCG‑CCGCAAACAGCCTTCGTTTTTTTTGATGGTTAGAAGAGCAATCAg > 2:571072/1‑249 (MQ=255) tatCAGCTATCAACTGTTCATCAATGCACCTTATGACCGACTGGTGACCAACAATGTTCGCTTCTGGAAAGATAGTGGCATTGCGGTTGATCTGACGTCAGCAGGGATGCGTGTGGAGATGGGCTCATTGACAACGCTGCTGAGTGGCGGTGGTAGCTTTTATGTGGCCGAAAGGCT‑GGGTTTTGGGGAGCCCGGGGGA‑CCGGAAAAAACTTTTGGTTTTTATGATGATTAGAAGAGGCTTTAGGATTCg > 1:100820/1‑250 (MQ=255) tCAGCTATCAACTGTTCATCAATGCACCTTATGACCGACTGGTGACCAACAATGTTCGCTTCTGGAAAGATAGTGGCATTGCGGTTGATCTGACGTCAGCAGGGATGCGTGTGGAGATGGGCTCATTGACAACGCTGCTGAGTGGCGGTGTCAGCTTTGATGTGCCGGGAGGGCT‑GGGTTTAGGGGAGCCAGTGGCA‑CCGAAAAAAGCTTTTGTTTTTTTTGATGATCAGAAAAGCATTTAGGATTTGtt > 1:537244/1‑250 (MQ=255) aaCTGTTCATCAATGCACCTTATGACCGACTGGTGACCAACAATGTTCGCTTCTGGAAAGATAGTGGCATTGCGGTTGATCTGACGTCAGCAGGGATGCGTGTGGAGATGGGCTCATTGACAACGCTGCTGAGTGGCGGGGTCCGCTTTTGTGTGGCGGGAGGGCT‑GGGTTTTTGGGAGCCAGGGGGT‑CCGGAAACACGTTTTGCTTTTTTTTATGATTAGAAGAGGATTCCGGGTTCGTTGTAAACCGa > 2:25348/1‑250 (MQ=255) gTTCATCAATGCACCTTATGACCGACTGGTGACCAACAATGTTCGCTTCTGGAAAGATAGTGGCATTGCGGTTGATCTGACGTCAGCAGGGATGCGTGTGGAGATGGGCTCATTGACAACGCTGCTGAGTGGCGGTGGCAGCTTTTGTGTGGCGGGAGGTGT‑GGGGTTTGGGCGGGCCGAGGCG‑CCGAAAACAGCTTTTGTTTTTTATTATGAGCAGAAAAGCAATCTGGAGTTGGTGTACACCgctaa > 2:564203/1‑245 (MQ=255) aaTGCACCTTATGACCGACTGGTGACCAACAATGTTCGCTTCTGGAAAGATAGTGGCATTGCGGTTGATCTGACGTCAGCAGGGATGCGTGTGGAGATGGGCTCATTGACAACGCTGCTGAGTGGCGGTGTTTGGGTTTTTTGGGCGGGAGGGCT‑GGGTTTTGGGGGGCCAGGGGGA‑CCCAAAAAAGCTTTCGGTTTTTTTGTTGATCTGGAAAGGAATCCGGGTTGGTTTTACACCCACCACATTTAtt > 2:524808/1‑250 (MQ=255) aTGCACCTTATGACCGACTGGTGACCAACAATGTTCGCTTCTGGAAAGATAGTGGCATTGCGGTTGATCTGACGTCAGCAGGGATGCGTGTGGAGATGGGCTCATTGACAACGCTGCTGAGTGGCGGTGTCAGCTTTTATGTGCCGGGAGGGCT‑GGGTTTTGGGGAGCCCGTGGGC‑CCGGAAACAACTTTTGGTTTTTTTGATGATTAGAAGAGCATTTCGGATTCGTTGTACACCGATCACATTGATTa > 1:563613/1‑250 (MQ=255) aTGCACCTTATGACCGACTGGTGACCAACAATGTTCGCTTCTGGAAAGATAGTGGCATTGCGGTTGATCTGACGTCAGCAGGGATGCGTGTGGAGATGGGCTCATTGACAACGCTGCTGAGTGGCGGTGTCAGCTTTGATGTGCCGGAAGGTCT‑GGATTTAGGGCAGCCAGTGGCA‑CCGAAAACAGCTTTCGTTTTGTATGATGATCAGAAGAGCATTCAGGATTCGTTGTACACCGATCACATTGATTa < 1:324621/250‑1 (MQ=255) aTGCACCTTATGACCGACTGGTGACCAACAATGTTCGCTTCTGGAAAGATAGTGGCATTGCGGTTGATCTGACGTCAGCAGGGATGCGTGTGGAGATGGGCTCATTGACAACGCTGCTGAGTGGCGGTGTCAGCTTTGATGTGCCGGAAGGTCT‑GGATTTAGGGCAGCCAGTGGCA‑CCGAAAACAGCTTTCGTTTTGTATGATGATCAGAAGAGCATTCAGGATTCGTTGTACACCGATCACATTGATTa < 2:381023/250‑1 (MQ=255) ccTTATGACCGACTGGTGACCAACAATGTTCGCTTCTGGAAAGATAGTGGCATTGCGGTTGATCTGACGTCAGCAGGGATGCGTGTGGAGATGGGCTCATTGACAACGCTGCTGAGTGGCGGTGGTAGCTTTTATGTGGCGGGAGGGCTGGGGTTTGGGGGGGCAGGGGGCA‑CGGAAAA‑AGCTTTTGGTTTGTATTATGATTAGAAGAGGAGTCAGGATTTGGTGTACACCGATCACATTGGTTTTCTGa > 2:59038/1‑250 (MQ=255) ttATGACCGACTGGTGACCAACAATGTTCGCTTCTGGAAAGATAGTGGCATTGCGGTTGATCTGACGTCAGCAGGGATGCGTGTGGAGATGGGCTCATTGACAACGCTGCTGAGTGGCGGTGTCAGCTTTTATGTGCCGGGAGGTCT‑GGGTTTTGGGCAGCCCGTGGCA‑CCGAAAACAGCTTTCGTTTTTTATGATGATCAGAAGAGCATTCAGGATTCGTTGTACACCCATCACATTGATTAttttatt > 1:67339/1‑244 (MQ=255) gACCGACTGGTGACCAACAATGTTCGCTTCTGGAAAGATAGTGGCATTGCGGTTGATCTGACGTCGGCAGGGATGCGTGTGGAGATGGGCTCATTGACAACGCTGCTGAGTGGCGGTGTCAGCTTTTATGTGGCGGGAGGGCT‑GGGTTTTGGGGAGCCCGCGGCC‑CCGGAAAAAGCTTTCGGTTTGTATGATGATCAGGAGAGCCATTAGGATTTGTTGGTCAACGATCACATTGATTATTTGGTGTTCt > 1:281981/1‑250 (MQ=255) aCCGACTGGTGACCAACAATGTTCGCTTCTGGAAAGATAGTGGCATTGCGGTTGATCTGACGTCAGCAGGGATGCGTGTGGAGATGGGCTCATTGACAACGCTGCTGAGTGGCGGTGGCAGCTTTTATGTGCCGGGAGGGCT‑GGGTTTTGGGGAGCCAGGGGGA‑CCGGAAAAAGCCTTTGTTTTTTATGATGATCAGAAGAGCATTCAGGATTTGTTGTACAACGCTCACATTGATTATCTGATGTtttt > 1:538958/1‑250 (MQ=255) gTGACCAACAATGTTCGCTTCTGGAAAGATAGTGGCATTGCGGTTGATCTGACGTCAGCAGGGATGCGTGTGGAGATGGGCTCATTGACAACGCTGCTGAGTGGCGGTGTCAGCTTTGATGTGCCGGAAGGTCT‑GGATTTAGGGCAGCCAGTGGCA‑CCGAAAACAGCTTTCGTTTTGTATGATGATCAGAAGAGCATTCAGGATTCGTTGTACACCGATCACATTGATTATCTGATGTTCTTTAAAGa < 1:445153/248‑1 (MQ=255) cGCTTCTGGAAAGATAGTGGCATTGCGGTTGATCTGACGTCAGCAGGGATGCGTGTGGAGATGGGCTCATTGACAACGCTGCTGAGTGGCGGTGTCAGCTTTGATGTGCCGGAAGGTCT‑GGATTTAGGGCAGCCAGTGGCA‑CCGAAAACAGCTTTCGTTTTGTATGATGATCAGAAGAGCATTCAGGATTCGTTGTACACCGATCACATTGATTATCTGATGTTCTTTAAAGATTCGGTACGCGGTCTg < 1:287489/249‑1 (MQ=255) cGCTTCTGGAAAGATAGTGGCATTGCGGTTGATCTGACGTCAGCAGGGATGCGTGTGGAGATGGGCTCATTGACAACGCTGCTGAGTGGCGGTGTCAGCTTTGATGTGCCGGAAGGTCT‑GGATTTAGGGCAGCCAGTGGCA‑CCGAAAACAGCTTTCGTTTTGTATGATGATCAGAAGAGCATTCAGGATTCGTTGTACACCGATCACATTGATTATCTGATGTTCTTTAAAGATTCGGTACGCGGTCTg < 2:248035/249‑1 (MQ=255) aTAGTGGCATTGCGGTTGATCTGACGTCAGCAGGGATGCGTGTGGAGATGGGCTCATTGACAACGCTGCTGAGTGGCGGTGTCAGCTTTTGTGTGGCGGGAGGGCT‑GGGTTTTGGGGAGGCAGGGGGG‑CCGAAAAAAGGCTTCGTTTTTTGTGTTGATTAGAAGAGCATTCAGGATTCGGTGTAAACCGATTACATTTATTTTTTGATGTTTTTTTAAAATTTGGTTAGCGGGCTGCC‑AACCgggggtcc > 2:256736/1‑245 (MQ=255) gCATTGCGGTTGATCGGACGTCAGCAGGGATGCGTGTGGAGATGGGCTCATTGACAACGCTGCTGAGTGGCGGTGTCAGCTTTGATGTGCCGGAAGGTCT‑GGATTTAGGGCAGCCAGTGGCA‑CCGAAAACAGCTTTCGTTTTGTATGATGATCAGAAGAGCATTCAGGATTCGTTGTACACCGATCACATTGATTATCTGATGTTCTTTAAAGATTCGGTACGCGGTCTG‑C‑AACCGGGAGCTCCGGTaga < 2:187811/250‑1 (MQ=255) cGGTTGATCTGACGTCAGCAGGGATGCGTGTGGAGATGGGCTCATTGACAACGCTGCTGAGTGGCGGTGTCAGCTTTGATGTGCCGGAAGGTCT‑GGATTTAGGGCAGCCAGTGGCA‑CCGAAAACAGCTTTCGTTTTGTATGATGATCAGAAGAGCATTCAGGATTCGTTGTACACCGATCACATTGATTATCTGATGTTCTTTAAAGATTCGGTACGCGGTCTG‑C‑AACCGGGAGCTCCGGTAGAGTTCCg < 1:83235/250‑1 (MQ=255) aCGTCAGCAGGGATGCGTGTGGAGATGGGCGCATTGACAACGCTGCTGAGTGGCGGTGTCAGCTTTGATGTGCCGGAAGGTCT‑GGATTTAGGGCAGCCAGTGGCA‑CCGAAAACAGCTTTCGTTTTGTATGATGATCAGAAGAGCATTCAGGATTCGTTGTACACCGATCACATTGATTATCTGATGTTCTTTAAAGATTCGGTACGCGGTCTG‑C‑AACCGGGAGCTCCGGTAGAGTTCCGGGGTAt < 1:497501/245‑1 (MQ=255) gTCAGCAGGGATGCGTGTGGAGATGGGCTCATTGACAACGCTGCTGAGTGGCGGTGTCAGCTTTGATGGGCCGGGAGGTCT‑GGATTTTGGGCAGCCCGTGGGA‑CCGAAAACAGCTTTCGTTTTTTTTGATGATCAGAAGAGCATTTAGGATTTGTTGTACACCGATCACATTTATTATTTGATGGTCTTTTAAGATTCGGTACGCGGGCTG‑C‑AACCGGGAGCTCCGGGAGAGGTCCGGGGGATTTGCCTg > 1:58796/1‑250 (MQ=255) agGGATGCGTGTGGAGATGGGCTCATTGACAACGCTGCTGAGTGGCGGTGTCAGCCTTGTTGTGCCGGGAGGGCT‑TGGTTTTGGGCAGCCCGGGGGC‑CCGGAAAAAACTTTTGTTTTTTTTGGTGGTCAGAAGAGCATTTAGGATTTGTTTTATACCCATCACCATTATTTTCTGATGTTTTTTTAAAATTTGGTACGCGGTCTG‑C‑AACCGGGAGCGCCCGGGTAGTTTCGGGGGGTTTGCCTGGGTGcc > 2:586668/1‑250 (MQ=255) gagaTGGGCTCATTGACAACGCTGCTGAGTGGCGGTGTCAGCGTTTATGGGCCGGGAGGTCT‑GGGTTTTGGGCAGCCAGTGGCA‑CCGAAAACAGATTTTGTTTTTTATGATGATCAGAAGAGCATTTAGGAATCGTTGTACACCGATCACATTGATTATCTGATGTTTTTTAAAGATTCGGTACTCGGGCTG‑C‑AACCGGGAGCTCCGGTAGAGTTCCGGGGGATTCGCCTGGGTACCGTAAGCAAAGAGc > 1:506782/1‑250 (MQ=255) aTGGGCTCATTGACAACGCTGCTGAGTGGCGGTGTCAGCTTTGATGTGCCGGAAGGTCT‑GGATTTAGGGCAGCCAGTGGCA‑CCGAAAACAGCTTTCGTTTTGTATGATGATCAGAAGAGCATTCAGGATTCGTTGTACACCGATCACATTGATTATCTGATGTTCTTTAAAGATTCGGTACGCGGTCTG‑C‑AACCGGGAGCTCCGGTAGAGTTCCGGGGTATTCGCCTGGGTACCGTAAGCAAAGTGCCAt < 2:208924/250‑1 (MQ=255) ttGACAACGCTGCTGAGTGGCGGTGTCAGCCTTTTTGTGTCGGTAGGGCC‑GGATTTTGGGGAGCCAGGGGCACCCGAAAAAAG‑TCTTTTTTTTTATTATGATTAGAAGAGCATTCAGGAATCGTTGTTCACCGATCACATTTATTTTCCTCTGTTTCTTTTAGATTTGGGACGCGGTCCG‑CTAACTGGGA‑CTCCGGGAAGGTTCCGGGGGATTTGCCTGGGGACCGCAAGCACAGTGCCATTCTTTtcgc > 2:188883/1‑250 (MQ=255) gCGGTGTCAGCTTTGATGTGCCGGAAGGTCT‑GGATTTAGGGCAGCCAGTGGCA‑CCGAAAACAGCTTTCGTTTTGTATGATGATCAGAAGAGCATTCAGGATTCGTTGTACACCGATCACATTGATTATCTGATGTTCTTTAAAGATTCGGTACGCGGTCTG‑C‑AACCGGGAGCTCCGGTAGAGTTCCGGGGTATTCGCCTGGGTACCGTAAGCAAAGTGCCATTCTTTGCGCCGAATATGCGTCAGACAt < 1:332995/249‑1 (MQ=255) gATGTGCCGGAAGGTCT‑GGATTTAGGGCAGCCAGTGGCA‑CCGAAAACAGCTTTCGTTTTGTATGATGATCAGAAGAGCATTCAGGATTCGTTGTACACCGATCACATTGATTATCTGATGTTCTTTAAAGATTCGGTACGCGGTCTG‑C‑AACCGGGAGCTCCGGTAGAGTTCCGGGGTATTCGCCTGGGTACCGTAAGCAAAGTGCCATTCTTTGCGCCGAATATGCGTCAGACATTTAACGATGATTAc < 1:426551/249‑1 (MQ=255) tgtgCCGGAAGGTCT‑GGATTTAGGGCAGCCAGTGGCA‑CCGAAAACAGCTTTCGTTTTGTATGATGATCAGAAGAGCATTCAGGATTCGTTGTACACCGATCACATTGATTATCTGATGTTCTTTAAAGATTCGGTACGCGGTCTG‑C‑AACCGGGAGCTCCGGTAGAGTTCCGGGGTATTCGCCTGGGTACCGTAAGCAAAGTGCCATTCTTTGCGCCGAATATGCGTCAGACATTTAACGATGATTACCg > 2:451049/1‑249 (MQ=255) ggAAGGTCT‑GGATTTAGGGCAGCCAGTGGCA‑CCGAAAACAGCTTTCGTTTTGTATGATGATCAGAAGAGCATTCAGGATTCGTTGTACACCGATCACATTGATTATCTGATGTTCTTTAAAGATTCGGTACGCGGTCTG‑C‑AACCGGGAGCTCCGGTAGAGTTCCGGGGTATTCGCCTGGGTACCGTAAGCAAAGTGCCATTCTTTGCGCCGAATATGCGTCAGACATTTAACGATGATTACCGTATTCCg > 2:341195/1‑250 (MQ=255) gAAGGTCT‑GGATTTAGGGCAGCCAGTGGCA‑CCGAAAACAGCTTTCGTTTTGTATGATGATCAGAAGAGCATTCAGGATTCGTTGTACACCGATCACATTGATTATCTGATGTTCTTTAAAGATTCGGTACGCGGTCTG‑C‑AACCGGGAGCTCCGGTAGAGTTCCGGGGTATTCGCCTGGGTACCGTAAGCAAAGTGCCATTCTTTGCGCCGAATATGCGTCAGACATTTAACGATGATTACCGTATTCCgg > 1:288653/1‑250 (MQ=255) ggTCT‑GGATTTAGGGCAGCCAGTGGCA‑CCGAAAACAGCTTTCGTTTTGTATGATGATCAGAAGAGCATTCAGGATTCGTTGTACACCGATCACATTGATTATCTGATGTTCTTTAAAGATTCGGTACGCGGTCTG‑C‑AACCGGGAGCTCCGGTAGAGTTCCGGGGTATTCGCCTGGGTACCGTAAGCAAAGTGCCATTCTTTGCGCCGAATATGCGTCAGACATTTAACGATGATTACCGTATTCCGGTAc > 2:14511/1‑250 (MQ=255) tCT‑GGATTTAGGGCAGCCAGTGGCA‑CCGAAAACAGCTTTCGTTTTGTATGATGATCAGAAGAGCATTCAGGATTCGTTGTACACCGATCACATTGATTATCTGATGTTCTTTAAAGATTCGGTACGCGGTCTG‑C‑AACCGGGAGCTCCGGTAGAGTTCCGGGGTATTCGCCTGGGTACCGTAAGCAAAGTGCCATTCTTTGCGCCGAATATGCGTCAGACATTTAACGATGATTACCGTATTCCGGTACTg < 1:388367/250‑1 (MQ=255) | TGCTGTTCCGTGGCTATCGGGTAGGTTCGGTTGAAACCAGCACCTTCGATACACAAAAACGCAATATCAGCTATCAACTGTTCATCAATGCACCTTATGACCGACTGGTGACCAACAATGTTCGCTTCTGGAAAGATAGTGGCATTGCGGTTGATCTGACGTCAGCAGGGATGCGTGTGGAGATGGGCTCATTGACAACGCTGCTGAGTGGCGGTGTCAGCTTTGATGTGCCGGAAGGTCT‑GGATTTAGGGCAGCCAGTGGCA‑CCGAAAACAGCTTTCGTTTTGTATGATGATCAGAAGAGCATTCAGGATTCGTTGTACACCGATCACATTGATTATCTGATGTTCTTTAAAGATTCGGTACGCGGTCTG‑C‑AACCGGGAGCTCCGGTAGAGTTCCGGGGTATTCGCCTGGGTACCGTAAGCAAAGTGCCATTCTTTGCGCCGAATATGCGTCAGACATTTAACGATGATTACCGTATTCCGGTACTG > NZ_CP009273/1009241‑1009728 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |