| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NZ_CP009273 | 2,551,890 | 0 | A | C | 40.6% | 124.4 / 13.6 | 69 | V50G (GTG→GGG) | eutB | ethanolamine ammonia‑lyase subunit alpha |
| Reads supporting (aligned to +/- strand): ref base A (31/10); new base C (0/28); total (31/38) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 3.54e-11 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
| Rejected as consensus: Frequency below/above cutoff threshold. | |||||||||||
TTGGAGCAAATCTTCGCTACCGCCGCGACCACTTCCGAGGTCAGCCCTTTGCGGGTAAAGGCAATGTCGTCCACGCTGGTTTCATCGCTCAGCACATACTCACGCAGTTCGCTGATGCTCCAGTTTTTAATCTGGTTGTAGGCCGTTTCGTTAACATCGTCCTGAATCAGCCGCGTCACGCAGTCATCTTCATAGGCAATCACCGGATTATTGCGGATGTCCGCTACGGTCATTTCCGACAACACCTGC‑TTTGCCGCCACGCGCTCCTGTGAGCTTGCCGCTGCGACGCCCGCCAGCACATCCCCCGAACGCAGTTCGTTGGCTTTAGCCAGCACCTCTTTTACATCCTTAAACTGATATACATTGCCGAACAATGTGGTCTTTAGTTTCATAAGTCGTTCCCTCAGGAAGAATCGATGATTGGCATTTTTCACAGCATTCTAACAATCACGTTTCATCGTCAGCCCTTGTCGTGTAAGGTGGTTGCCT > NZ_CP009273/2551647‑2552135 | ttGGAGCAAATCTTCGCTACCGCCGCGACCACTTCCGAGGTCAGCCCTTTGCGGGTAAAGGCAATGTCGTCCACGCTGGTTTCATCGCTCAGCACATACTCACGCAGTTCGCTGATGCTCCAGTTTTTAATCTGGTTGTAGGCCGTTTCGTTAACATCGTCCTGAATCAGCCGCGTCACGCAGTCATCTTCATAGGCAATCACCGGATTATTGCGGATGTCCGCTACGGTCATTTCCGACAACACCTGC‑t < 2:405787/250‑1 (MQ=255) gAGCAAATCTTCGCTACCGCCGCGACCACTTCCGAGGTCAGCCCTTTGCGGGTAAAGGCAATGTCGTCCACGCTGGTTTCATCGCTCAGCACATACTCACGCAGTTCGCTGATGCTCCAGTTTTTAATCTGGTTGTAGGCCGTTTCGTTAACATCGTCCTGAATCAGCCGCGTCACGCAGTCATCTTCATAGGCAATCACCGGATTATTGCGGATGTCCGCTACGGTCATTTCCGACAACACCTGC‑TTTg < 2:50234/250‑1 (MQ=255) cTACCGCCGCGACCACTTCCGAGGTCAGCCCTTTGCGGGTAAAGGCAATGTCGTCCACGCTGGTTTCATCGCTCAGCACATACTCACGCAGTTCGCTGATGCTCCAGTTTTTAATCTGGTTGTAGGCCGTTTCGTTAACATCGTCCTGAATCAGCCGCGTCACGCAGTCATCTTCATAGGCAATCACCGGATTATTGCGGATGTCCGCTACGGTCATTTCCGACAACACCTGC‑TTTGCCGCCACGCGCTc > 1:437601/1‑250 (MQ=255) tACCGCCGCGACCACTTCCGAGGTCAGCCCTTTGCGGGTAAAGGCAATGTCGTCCACGCTGGTTTCATCGCTCAGCACATACTCACGCAGTTCGCTGATGCTCCAGTTTTTAATCTGGTTGTAGGCCGTTTCGTTAACATCGTCCTGAATCAGCCGCGTCACGCAGTCATCTTCATAGGCAATCACCGGATTATTGCGGATGTCCGCTACGGTCATTTCCGACAACACCTGC‑TTTGCCGCCACGCGCTcc > 1:80063/1‑250 (MQ=255) gccgcGACCACTTCCGAGGTCAGCCCTTTGCGGGTAAAGGCAATGTCGTCCACGCTGGTTTCATCGCTCAGCACATACTCACGCAGTTCGCTGATGCTCCAGTTTTTAATCTGGTTGTAGGCCGTTTCGTTAACATCGTCCTGAATCAGCCGCGTCACGCAGTCATCTTCATAGGCAATCACCGGATTATTGCGGATGTCCGCTACGGTCATTTCCGACAACACCTGC‑TTTGCCGCCACGCGCTCCtgt > 2:284057/1‑249 (MQ=255) gccgcGACCACTTCCGAGGTCAGCCCTTTGCGGGTAAAGGCAATGTCGTCCACGCTGGTTTCATCGCTCAGCACATACTCACGCAGTTCGCTGATGCTCCAGTTTTTAATCTGGTTGTAGGCCGTTTCGTTAACATCGTCCTGAATCAGCCGCGTCACGCAGTCATCTTCATAGGCAATCACCGGATTATTGCGGATGTCCGCTACGGTCATTTCCGACAACACCTGC‑TTTGCCGCCACGCGCTCCtgt > 2:350783/1‑249 (MQ=255) ccgcGACCACGTCCGAGGTCAGCCCTTTGCGGGTAAAGGCAATGTCGTCCACGCTGGTTTCATCGCTCAGCACATACTCACGCAGTTCGCTGATGCTCCAGTTTTTAATCTGGTTGTAGGCCGTTTCGTTAACATCGTCCTGAATCAGCCGCGTCACGCAGTCATCTTCATAGGCAATCACCGGATTATTGCGGATGTCCGCTACGGTCATTTCCGACAACACCTGC‑TTTGCCGCCACGCGCTCCTGTGa < 2:386551/250‑1 (MQ=255) ccGAGGTCAGCCCTTTGCGGGTAAAGGCAATGTCGTCCACGCTGGTTTCATCGCTCAGCACATACTCACGCAGTTCGCTGATGCTCCAGTTTTTAATCTGGTTGTAGGCCGTTTCGTTAACATCGTCCTGAATCAGCCGCGTCACGCAGTCATCTTCATAGGCAATCACCGGATTATTGCGGATGTCCGCTACGGTCATTTCCGACAACACCTGC‑TTTGCCGCCACGCGCTCCTGTGAGCTTGCCGCTg < 2:524588/249‑1 (MQ=255) gTCAGCCCTTTGCGGGTAAAGGCAATGTCGTCCACGCTGGTTTCATCGCTCAGCACATACTCACGCAGTTCGCTGATGCTCCAGTTTTTAATCTGGTTGTAGGCCGTTTCGTTAACATCGTCCTGAATCAGCCGCGTCACGCAGTCATCTTCATAGGCAATCACCGGATTATTGCGGATGTCCGCTACGGTCATTTCCGACAACACCTGC‑TTTGCCGCCACGCGCTCCTGTGAGCTTGCCGCTGCGAcgc > 1:148029/1‑250 (MQ=255) ccTTTGCGGGTAAAGGCAATGTCGTCCACGCTGGTTTCATCGCTCAGCACATACTCACGCAGTTCGCTGATGCTCCAGTTTTTAATCTGGTTGTAGGCCGTTTCGTTAACATCGTCCTGAATCAGCCGCGTCACGCAGTCATCTTCATAGGCAATCACCGGATTATTGCGGATGTCCGCTACGGTCATTTCCGACAACACCTGC‑TTTGCCGCCACGCGCTCCTGTGAGCTTGCCGCTGCGACGCCCGCCa < 1:249732/250‑1 (MQ=255) ccTTTGCGGGTAAAGGCAATGTCGTCCACGCTGGTTTCATCGCTCAGCACATACTCACGCAGTTCGCTGATGCTCCAGTTTTTAATCTGGTTGTAGGCCGTTTCGTTAACATCGTCCTGAATCAGCCGCGTCACGCAGTCATCTTCATAGGCAATCACCGGATTATTGCGGATGTCCGCTACGGTCATTTCCGACAACACCTGC‑TTTGCCGCCACGCGCTCCTGTGAGCTTGCCGCTGCGACGCCCGCCa < 1:458878/250‑1 (MQ=255) gCGGGTAAAGGCAATGTCGTCCACGCTGGTTTCATCGCTCAGCACATACTCACGCAGTTCGCTGATGCTCCAGTTTTTAATCTGGTTGTAGGCCGTTTCGTTAACATCGTCCTGAATCAGCCGCGTCACGCAGTCATCTTCATAGGCAATCACCGGATTATTGCGGATGTCCGCTACGGTCATTTCCGACAACACCTGC‑TTTGCCGCCACGCGCTCCTGTGAGCTTGCCGCTGCGACGCCCGCCAGcaca > 1:292830/1‑250 (MQ=255) tAAAGGCAATGTCGTCCACGCTGGTTTCATCGCTCAGCACATACTCACGCAGTTCGCTGATGCTCCAGTTTTTAATCTGGTTGTAGGCCGTTTCGTTAACATCGTCCTGAATCAGCCGCGTCACGCAGTCATCTTCATAGGCAATCACCGGATTATTGCGGATGTCCGCTACGGTCATTTCCGACAACACCTGC‑TTTGCCGCCACGCGCTCCTGTGAGCTTGCCGCTGCGACGCCCGCCAGCACATcccc > 2:515485/1‑250 (MQ=255) tAAAGGCAATGTCGTCCACGCTGGTTTCATCGCTCAGCACATACTCACGCAGTTCGCTGATGCTCCAGTTTTTAATCTGGTTGTAGGCCGTTTCGTTAACATCGTCCTGAATCAGCCGCGTCACGCAGTCATCTTCATAGGCAATCACCGGATTATTGCGGATGTCCGCTACGGTCATTTCCGACAACACCTGC‑TTTGCCGCCACGCGCTCCTGTGAGCTTGCCGCTGCGACGCCCGCCAGCACATcccc > 1:391791/1‑250 (MQ=255) aaTGTCGTCCACGCTGGTTTCATCGCTCAGCACATACTCACGCAGTTCGCTGATGCTCCAGTTTTTAATCTGGTTGTAGGCCGTTTCGTTAACATCGTCCTGAATCAGCCGCGTCACGCAGTCATCTTCATAGGCAATCACCGGATTATTGCGGATGTCCGCTACGGTCATTTCCGACAACACCTGC‑TTTGCCGCCACGCGCTCCTGTGAGCTTGCCGCTGCGACGCCCGCCAGCACATCCCCCGAACg > 1:191643/1‑249 (MQ=255) aTGTCGTCCACGCTGGTTTCATCGCTCAGCACATACTCACGCAGTTCGCTGATGCTCCAGTTTTTAATCTGGTTGTAGGCCGTTTCGTTAACATCGTCCTGAATCAGCCGCGTCACGCAGTCATCTTCATAGGCAATCACCGGATTATTGCGGATGTCCGCTACGGTCATTTCCGACAACACCTGC‑TTTGCCGCCACGCGCTCCTGTGAGCTTGCCGCTGCGACGCCCGCCAGCACATCCCCCGAACg > 1:184589/1‑248 (MQ=255) tcgtcCACGCTGGTTTCATCGCTCAGCACATACTCACGCAGTTCGCTGATGCTCCAGTTTTTAATCTGGTTGTAGGCCGTTTCGTTAACATCGTCCTGAATCAGCCGCGTCACGCAGTCATCTTCATAGGCAATCACCGGATTATTGCGGATGTCCGCTACGGTCATTTCCGACAACACCTGC‑TTTGCCGCCACGCGCTCCTGTGAGCTTGCCGCTGCGACGCCCGCCAGCACATCCCCCGAACGCAGtt > 1:509907/1‑250 (MQ=255) cgtcCACGCTGGTTTCATCGCTCAGCACATACTCACGCAGTTCGCTGATGCTCCAGTTTTTAATCTGGTTGTAGGCCGTTTCGTTAACATCGTCCTGAATCAGCCGCGTCACGCAGTCATCTTCATAGGCAATCACCGGATTATTGCGGATGTCCGCTACGGTCATTTCCGACAACACCTGC‑TTTGCCGCCACGCGCTCCTGTGAGCTTGCCGCTGCGACGCCCGCCAGCACATCCCCCGAACGCAGTTc > 1:314270/1‑250 (MQ=255) tcCACGCTGGTTTCATCGCTCAGCACATACTCACGCAGTTCGCTGATGCTCCAGTTTTTAATCTGGTTGTAGGCCGTTTCGTTAACATCGTCCTGAATCAGCCGCGTCACGCAGTCATCTTCATAGGCAATCACCGGATTATTGCGGATGTCCGCTACGGTCATTTCCGACAACACCTGC‑TTTGCCGCCACGCGCTCCTGTGAGCTTGCCGCTGCGACGCCCGCCAGCACATCCCCCGAACGCAGTTCGt > 2:117596/1‑250 (MQ=255) gCTGGTTTCATCGCTCAGCACATACTCACGCAGTTCGCTGATGCTCCAGTTTTTAATCTGGTTGTAGGCCGTTTCGTTAACATCGTCCTGAATCAGCCGCGTCACGCAGTCATCTTCATAGGCAATCACCGGATTATTGCGGATGTCCGCTACGGTCATTTCCGACAACACCTGC‑TTTGCCGCCACGCGCTCCTGTGAGCTTGCCGCTGCGACGCCCGCCAGCACATCCCCCGAACGCAGTTCGTTGGCt > 1:606818/1‑250 (MQ=255) gCTGGTTTCACCGCTCAGAACATACCCACGCAGTTCGCTGATGCTCCATTTTTTAATCTGGTTGTGGGCCTTTTCGTAAACATCGCCCTGAACCAGCCGCGCCCCGCAGTCCTCTCCATAGGCATCCCCCGGTTTATTGCGGATGTCCGCTACGTTCTTTCCCGACACCCCCTCC‑TTTCCCGCCCCGCCCCCCTGGGGGCTTGCCGCGGCGACGCCCGCCAGCACATCCCCCGAACGCAGTTCGTTGGCt < 2:385618/250‑1 (MQ=255) ccccTCACCACATCCCCACGCTGTTCGTGGATTCTCCATTTTTTAATCTGTTTGTAGGCCGTTTCTTTACCATCCTCCTGAAGCACCCGCGTCCCGCAGTCATCTTCATAGGCAACCCCCGAATTATTGCGGATGCCCGCTACGGTCATTCCCGACACCCCCTGC‑TTCGCCGCCCCGCCCTCCTGTGCGCTTGCCGCTGCGCCGCCCGCCAGCACATCCCCCGAACGCAGTTCGTTGGCTTTAGCCAGCa < 2:52487/247‑1 (MQ=255) caTACTCACGCAGTTCGTTGATGCTCCAGTTTTTAATCTGGTTGTAGGCCGTTTCTTTAACATCGTCCTGAATCAGCCGCGTCACGCAGTCATCTTCATAGGCAATCACCGGATTATTGCGGATGTCCGCTACGGTCATTTCCGACAACACCTGC‑TTTGCCGCCACGCGCTCCTGTGAGCTTGCCGCTGCGACGCCCGCCAGCACATCCCCCGAACGCAGTTCGTTGGCTTTAGCCAGCACCTCTTTTAc < 1:298680/250‑1 (MQ=255) caTACTCACGCAGTTCGCTGATGCTCCAGTTTTTAATCTGGTTGTAGGCCGTTTCGTTAACATCGTCCTGAATCAGCCGCGTCACGCAGTCATCTTCATAGGCAATCACCGGATTATTGCGGATGTCCGCTACGGTCATTTCCGACAACACCTGC‑TTTGCCGCCACGCGCTCCTGTGAGCTTGCCGCTGCGACGCCCGCCAGCACATCCCCCGAACGCAGTTCGTTGGCTTTAGCCAGCACCTCTTTTa > 1:110735/1‑249 (MQ=255) aTACTCACGCAGTTCGCTGATGCTCCAGTTTTTAATCTGGTTGTAGGCCGTTTCGTTAACATCGTCCTGAATCAGCCGCGTCACGCAGTCATCTTCATAGGCAATCACCGGATTATTGCGGATGTCCGCTACGGTCATTTCCGACAACACCTGC‑TTTGCCGCCACGCGCTCCTGTGAGCTTGCCGCTGCGACGCCCGCCAGCACATCCCCCGAACGCAGTTCGTTGGCTTTAGCCAGCACCTCTTTTACa > 1:500376/1‑250 (MQ=255) gcgcgGTTCGCTGTGGCTCCAGTTTTTAATTGGGTGGTGGCCCTTTTCGTTACCCTCGTCCGAAAGCAGCCCGGCCACCCAGTCATCTTCATAGCCACGCACCGGATTTTTGCGGTTTCCCGCTCCGTTTCTTCCCGACAACCCCTGT‑TTTGCCCCCCCGCGCTCCTGTGGGCTTGCCGCTGCGCCGCCCGCCAGCACATCCCCCGAACGCAGTTCGTTGGCTTTAGCCAGCACCTCTTTTACATCCt < 2:503107/247‑1 (MQ=255) cTGATGCTCCAGTTTTTAATCTGGTTGTAGGCCGTTTCGTTAACATCGTCCTGAATCAGCCGCGTCACGCAGTCATCTTCATAGGCAATCACCGGATTATTGCGGATGTCCGCTACGGTCATTTCCGACAACACCTGC‑TTTGCCGCCACGCGCTCCTGTGAGCTTGCCGCTGCGACGCCCGCCAGCACATCCCCCGAACGCAGTTCGTTGGCTTTAGCCAGCACCTCTTTTACATCCTTAAACTGAtata > 1:208547/1‑250 (MQ=255) cTGATGCCACAGTTTTTAAGTTGTTTGTCGCCCGTTTCTTACACATCTCCCGGACCCAGCCGCGCCCCGCAGTCATCTTCATGGCCAATCCCCGGATTATTGCGGATGCCCGCTACGTTCATTTCCGACACCCCCTGC‑TTCGCCCCCTCCCTCCCCTGTGACCTTGCCGCTGCCACGCCCGCCAGCACATCCCCCGAACGCAGTTCGTTGGCTTTAGCCAGCACCTCTTTTACATCCTTAAACTGAtata < 2:379924/250‑1 (MQ=255) tGATGCTCCAGTTTTTAATCTGGTTGTAGGCCGTTTCGTTAACATCGTCCTGAATCAGCCGCGTCACGCAGTCATCTTCATAGGCAATCACCGGATTATTGCGGATGTCCGCTACGGTCATTTCCGACAACACCTGC‑TTTGCCGCCACGCGCTCCTGTGAGCTTGCCGCTGCGAGGCCCGCCAGCACATCCCCCGAACGCAGTTCGTTGGCTTTAGCCAGCACCTCTTTTACATCCTTAAACTGAtata > 2:374451/1‑249 (MQ=255) tAATCTGGTTGTAGGCCGTTTCGTTAACATCGTCCTGAATCAGCCGCGTCACGCAGTCATCTTCATAGGCAATCACCGGATTATTGCGGATGTCCGCTACGGTCATTTCCGACAACACCTGC‑TTTGCCGCCACGCGCTCCTGTGAGCTTGCCGCTGCGACGCCCGCCAGCACATCCCCCGAACGCAGTTCGTTGGCTTTAGCCAGCACCTCTTTTACATCCTTAAACTGATATACATTGCCGAACAAtgt > 1:557830/1‑250 (MQ=255) aattgggTTGTAGGCTGTTTCGTTACCATCTCCCGGAACCGGCCGCGCCACGCAGTCATCTTCATAGGCAATCCCCGGATTATTGCGGATGTCCGCTCCGGTCATTCCCGACACCCCCTGC‑TTCGCCGCCCCGCGCTCCGGTGAGCTTGCCGCTGCGCCGCCCGCCAGCACATCCCCCGAACGCAGTTCGTTGGCTTTAGCCAGCACCTCTTTTACATCCTTAAACTGATATACATTGCCGAACAAtgt < 2:57623/244‑1 (MQ=255) aTCTGGTTGTAGGCCGTTTCGTTAACATCGTCCTGAATCAGCCGCGTCACGCAGTCATCTTCATAGGCAATCACCGGATTATTGCGGATGTCCGCTACGGTCATTCCCGACAACCCCTGC‑TTTGCCGCCCCGCGCTCCTGTGAGCTTGCCGCTGCGCCGCCCGCCAGCACATCCCCCGAACGCAGTTCGTTGGCTTTAGCCAGCACCTCTTTTACATCCTTAAACTGATATACATTGCCGAACAATGTgg < 1:288237/250‑1 (MQ=255) tGGTTGTGGGCCTTTTCGTTACCCTCGTCTGAAACCAGCCGCGCCGCGCACTCACCTTCATAGACAATCCCCGGATTTTTGCGGATGCCCGCTCCGGCCATTTCCGCCAACCCCTGC‑TGTGCCCCCCCGCGCGCCTGTGGGCTTGCCGCGGCGCCGCCCGCCAGCACATCCCCCGAACGCAGTTCGTTGGCTTTAGCCAGCACCTCTTTTACATCCTTAAACTGATATACATTGCCGAACAATGTGGTCt < 2:434077/250‑1 (MQ=255) gTTGTAGGCCGTTTCGTTAACATCGTCCTGAATCAGCCGCGCCCCGCAGTCATCTTAAAAGGCAATCCCCGGATTATTGCGGATGTCCGCTACGGTCATTCCCGACACCCCCTGC‑TTTGCCGCCCCGCGCTCCTGTGAGCTTGCCGCTGCGACGCCCGCCAGCACATCCCCCGAACGCAGTTCGTTGGCTTTAGCCAGCACCTCTTTTACATCCTTAAACTGATATACATTGCCGAACAATGTGGTCt < 1:18330/248‑1 (MQ=255) ttGTAGGCCGTTTCGTTAACATCGCCCTGAATCAGCCGCGTCACGCAGTCATCTTCATAGGCAATCACCGGATTATTGCGGATGCCCGCTACGGTCATTTCCGACACCCCCTGC‑TTTGCCGCCCCGCGCTCCTGTGAGCTTGCCGCTGCGACGCCCGCCAGCACATCCCCCGAACGCAGTTCGTTGGCTTTAGCCAGCACCTCTTTTACATCCTTAAACTGATATACATTGCCGAACAATGTGGTCTTTa < 1:356791/250‑1 (MQ=255) gTAGGCCGTTTCGTTAACATCGTCCTGAATCAGCCGCGTCACGCAGTCATCTTCATAGGCAATCACCGGATTATTGCGGATGTCCGCTACGGTCATTTCCGACAACACCTGC‑TTTGCCGCCACGCGCTCCTGTGAGCTTGCCGCTGCGACGCCCGCCAGCACATCCCCCGAACGCAGTTCGTTGGCTTTAGCCAGCACCTCTTTTACATCCTTAAACTGATATACATTGCCGAACAATGTGGTCTTTAGt > 2:427419/1‑250 (MQ=255) tagcctgTTGCGTAAACAGCGCCCGAAAACAGCCGCGTCACGCAGTCTTCTACATAGACAACCCCGGGTTTATTGCGGATGTCCGGTCGGTTCATTCCCCAAAACCCCTGC‑TTGCCCCCCACGGCCTCCTGTGGGTTGGGCGCTGCGACGCCCGCCAGCACATCCCCCGAACGCAGTTCGTTGGCTTTAGCCAGCACCTCTTTTACATCCTTAAACTGATATACATTGCCGAACAATGTGGTCTTTAGt < 2:323113/243‑1 (MQ=255) gTTTCGTTAACATCGTCCTGAATCAGCCGCGTCACGCAGTCATCTTCATAGGCAATCACCGGATTATTGCGGATGTCCGCTACGGTCATTTCCGACAACACCTGC‑TTTGCCGCCACGCGCTCCTGTGAGCTTGCCGCTGCGACGCCCGCCAGCACATCCCCCGAACGCAGTTCGTTGGCTTTAGCCAGCACCTCTTTTACATCCTTAAACTGATATACATTGCCGAACAATGTGGTCTTTAGTTTCAt > 2:339616/1‑248 (MQ=255) cagtaaaCATCTTCCTGACTCACCCGCGTCACGCAGTCATCTTCATAGGAAACCACCGAATTTTTGCGGATGTCCTCTAGGGTCATTCCCGACACCCCCGCC‑TTTGCCGCCCCGCGCTCCTGTGAGCTTGCCGCTGCGACGCCCGCCAGCACATCCCCCGAACGCAGTTCGTTGGCTTTAGCCAGCACCTCTTTTACATCCTTAAACTGATATACATTGCCGAACAATGTGGTCTTTAGTTTCATAAGt < 2:473284/244‑1 (MQ=255) gTTAACATCGTCCTGAATCAGCCGCGTCACGCAGTCATCTTCATAGGCAATCCCCGGATTATTGCGGATGTCCGCTACGGTCATTTCCGACAACCCCTGC‑TTTGCCGCCACGCGCTCCTGTGAGCTTGCCGCTGCGACGCCCGCCAGCACATCCCCCGAACGCAGTTCGTTGGCTTTAGCCAGCACCTCTTTTACATCCTTAAACTGATATACATTGCCGAACAATGTGGTCTTTAGTTTCATAAGTCGt < 1:423760/250‑1 (MQ=255) ccTGAATCAGCCGCGTCACGCAGTCATCTTCATAGGCAATCACCGGATTATTGCGGATGTCCGCTACGGTCATTTCCGACACCCCCTGC‑TTTGCCGCCACGCGCTCCTGTGAGCTTGCCGCTGCGACGCCCGCCAGCACATCCCCCGAACGCAGTTCGTTGGCTTTAGCCAGCACCTCTTTTACATCCTTAAACTGATATACATTGCCGAACAATGTGGTCTTTAGTTTCATAAGTCGTTCCCTCAGgaa < 1:376054/250‑1 (MQ=255) aaaccgCCGCGTCGCGCAGTCTTCTTCATAGGCAATCCCCGGTTTTGCGCGGCTGCCCGCTACGGTCTTCTCCGACACCCCCTGC‑TTTCCCGCCACGCGCTCCTGTGCGCTGGCCGCTGCGACGCCCGCCAGCACATCCCCCGAACGCAGTTCGTTGGCTTTAGCCAGCACCTCTTTTACATCCTTAAACTGATATACATTGCCGAACAATGTGGTCTTTAGTTTCATAAGTCGTTCCCTCAGGAAGAAt < 2:16935/245‑1 (MQ=255) aaTCAGCCGCGTCACGCAGCCTTCTTCATAGGCAATCCCCGGTTTATGGCGGATGCCCGCTCCGGTCATTCCCGACAACACCTGC‑TTGGCCGCCACGCGCTCCTGTGAGCTGGCCGCTGCGACGCCCGCCAGCACATCCCCCGAACGCAGTTCGTTGGCTTTAGCCAGCACCTCTTTTACATCCTTAAACTGATATACATTGCCGAACAATGTGGTCTTTAGTTTCATAAGTCGTTCCCTCAGGAAGAAt < 2:391791/250‑1 (MQ=255) cAGCCGCGTCACGCAGTCATCTTCATAGGCAATCACCGGATTATTGCGGATGTCCGCTACGGTCATTTCCGACAACACCTGC‑TTTGCCGCCACGCGCTCCTGTGAGCTTGCCGCTGCGACGCCCGCCAGCACATCCCCCGAACGCAGTTCGTTGGCTTTAGCCAGCACCTCTTTTACATCCTTAAACTGATATACATTGCCGAACAATGTGGTCTTTAGTTTCATAAGTCGTTCCCTCAGGAAGAATCga > 2:49668/1‑250 (MQ=255) cgcgtccccgactCATCTTCATAGGCAACCCCCGTATTATGGCGGCTGCCCCCTCCGGTCTTTCCCGAC‑ACCCCTGCTTTTCCCCCCTCCCCCTCCGGTGAGCTTCCCGCTGCGACGCCCGCCAGCACATCCCCCGAACGCAGTTCGTTGGCTTTAGCCAGCACCTCTTTTACATCCTTAAACTGATATACATTGCCGAACAATGTGGTCTTTAGTTTCATAAGTCGTTCCCTCAGGAAGAATCgattat < 2:482696/238‑1 (MQ=255) cgccacACGCAGTCATCTTCATGGGCAACCCCCGGTTTATTGCGTGTGCCCGTTTCGGTCATTCCCACCAACCCCTCC‑TTGGCCCCCACGCGCTCTTGTGTGCTTGCCGCTGCGACGCCCGCCAGCACATCCCCCGAACGCAGTTCGTTGGCTTTAGCCAGCACCTCTTTTACATCCTTAAACTGATATACATTGCCGAACAATGTGGTCTTTAGTTTCATAAGTCGTTCCCTCAGGAAGAATCgatgat < 2:38977/245‑1 (MQ=255) cgTCACGCAGTCATCTTCATAGGCAATCACCGGATTATTGCGGATGTCCGCTACGGTCATTTCCGACAACCCCTGC‑TTTGCCGCCACGCGCTCCTGTGAGCTTGCCGCTGCGACGCCCGCCAGCACATCCCCCGAACGCAGTTCGTTGGCTTTAGCCAGCACCTCTTTTACATCCTTAAACTGATATACATTGCCGAACAATGTGGTCTTTAGTTTCATAAGTCGTTCCCTCAGGAAGAATCGATGATTg < 1:587724/250‑1 (MQ=255) gTCATCTTCATAGGCAATCACCGGATTATTGCGGATGTCCGCTACGGTCATTTCCGACAACACCTGC‑TTTGCCGCCACGCGCTCCTGTGAGCTTGCCGCTGCGACGCCCGCCAGCACATCCCCCGAACGCAGTTCGTTGGCTTTAGCCAGCACCTCTTTTACATCCTTAAACTGATATACATTGCCGAACAATGTGGTCTTTAGTTTCATAAGTCGTTCCCTCAGGAAGAATCGATGATTGGCAttttt > 1:79560/1‑249 (MQ=255) gTCATCTTCATAGGCAATCACCGGATTATTGCGGATGTCCGCTACGGTCATTTCCGACAACACCTGC‑TTTGCCGCCACGCGCTCCTGTGAGCTTGCCGCTGCGACGCCCGCCAGCACATCCCCCGAACGCAGTTCGTTGGCTTTAGCCAGCACCTCTTTTACATCCTTAAACTGATATACATTGCCGAACAATGTGGTCTTTAGTTTCATAAGTCGTTCCCTCAGGAAGAATCGATGATTGGCAttttt > 1:398973/1‑249 (MQ=255) tcttCTTCAGAGGCATCCACCGGATTGGTGGGTGTGCCCGCTGCGTTCTTTCCCGCCACCCCCTGC‑TTCCCCCCCCCCCCCTCCTGTGGTCTTCCCGCTGCGCCCCCCGCCAGCACATCCCCCGAACGCAGTTCGTTGGCTTTAGCCAGCACCTCTTTTACATCCTTAAACTGATATACATTGCCGAACAATGTGGTCTTTAGTTTCATAAGTCGTTCCCTCAGGAAGAATCGATGATTGGCATTTTTc < 2:270200/246‑1 (MQ=255) tCATCTTCATAGGCAATCACCGGATTATTGCGGATGTCCGCTACGGTCATTTCCGACAACACCTGC‑TTTGCCGCCACGCGCTCCTGTGAGCTTGCCGCTGCGACGCCCGCCAGCACATCCCCCGAACGCAGTTCGTTGGCTTTAGCCAGCACCTCTTTTACATCCTTAAACTGATATACATTGCCGAACAATGTGGTCTTTAGTTTCATAAGTCGTTCCCTCAGGAAGAATCGATGATTGGCATTTTTca > 2:456112/1‑250 (MQ=255) cATCTTCATAGGCAATCACCGGATTATTGCGGATGTCCGCTACGGCCATTTCCGACAACACCTGC‑TTTGCCGCCACGCGCTCCTGTGAGCTTGCCGCTGCGACGCCCGCCAGCACATCCCCCGAACGCAGTTCGTTGGCTTTAGCCAGCACCTCTTTTACATCCTTAAACTGATATACATTGCCGAACAATGTGGTCTTTAGTTTCATAAGTCGTTCCCTCAGGAAGAATCGATGATTGGCATTTTTca > 2:322867/1‑249 (MQ=255) tCATAGGCAATCACCGGATTATTGCGGATGTCCGCTACGGTCATTTCCGACAACACCTGC‑TTTGCCGCCACGCGCTCCTGTGAGCTTGCCGCTGCGACGCCCGCCAGCACATCCCCCGAACGCAGTTCGTTGGCTTTAGCCAGCACCTCTTTTACATCCTTAAACTGATATACATTGCCGAACAATGTGGTCTTTAGTTTCATAAGTCGTTCCCTCAGGAAGAATCGATGATTGGCATTTTTCACAGCAt > 2:272778/1‑250 (MQ=255) tAGGCAATCACCGGATTATTGCGGATGTCCGCTACGGTCATTTCCGACAACACCTGC‑TTTGCCGCCACGCGCTCCTGTGAGCTTGCCGCTGCGACGCCCGCCAGCACATCCCCCGAACGCAGTTCGTTGGCTTTAGCCAGCACCTCTTTTACATCCTTAAACTGATATACATTGCCGAACAATGTGGTCTTTAGTTTCATAAGTCGTTCCCTCAGGAAGAATCGATGATTGGCATTTTTCACAGCATTc > 1:560395/1‑249 (MQ=255) aaTCCCCGGATTAGTGCGGATGTCCTCTCGGGTCATCCCCGACACCCCCTGC‑TGTCCCCCCCCGCGCCCCTGTGCGCTGGCCGCTGCGCCGCCCGCCAGCACATCCCCCGAACGCAGTTCGTTGGCTTTAGCCAGCACCTCTTTTACATCCTTAAACTGATATACATTGCCGAACAATGTGGTCTTTAGTTTCATAAGTCGTTCCCTCAGGAAGAATCGATGATTGGCATTTTTCACAGCATTCTAACaa < 2:500376/250‑1 (MQ=255) aaTCACCGGATTATTGCGGATGCCGCCTGCGGTCATTCCCGCCACCCCCTGC‑TCCCCCGCCCCCCGCCCCTGTGAGCGTGCCGCTGAGACGCCCGCCAGCACATCCCCCGAACGCAGTTCGTTGGCTTTAGCCAGCACCTCTTTTACATCCTTAAACTGATATACATTGCCGAACAATGTGGTCTTTAGTTTCATAAGTCGTTCCCTCAGGAAGAATCGATGATTGGCATTTTTCACAGCATTCTAACaa < 2:587195/250‑1 (MQ=255) aTCACCGGTTTATTGCGGATGTCCGCTACGGTCCTTCCCGCCACCCCCTGC‑TTGCCCGCCCCGCGCCCCTGTGAGCTGGCCGCGGCGACGCCCGCCAGCACATCCCCCGAACGCAGTTCGTTGGCTTTAGCCAGCACCTCTTTTACATCCTTAAACTGATATACATTGCCGAACAATGTGGTCTTTAGTTTCATAAGTCGTTCCCTCAGGAAGAATCGATGATTGGCATTTTTCACAGCATTCTAACAAt < 2:535846/250‑1 (MQ=255) ccGGATGATGGGGGTTGTCCCCTTCGGTCATTCCCGACCACCCCTGC‑TTTGCCCCCCCGCTCTCCTGTGAGTTGCCCGCTGCGACGCCCGCCAGCACATCCCCCGAACGCAGTTCGTTGGCTTTAGCCAGCACCTCTTTTACATCCTTAAACTGATATACATTGCCGAACAATGTGGTCTTTAGTTTCATAAGTCGTTCCCTCAGGAAGAATCGATGATTGGCATTTTTCACAGCATTCTAACAATCACg < 2:292830/250‑1 (MQ=255) ggATTATTGCGGATGTCCGCTACGGTCATTTCCGACAACACCTGC‑TTTGCCGCCACGCGCTCCTGTGAGCTTGCCGCTGCGACGCCCGCCAGCACATCCCCCGAACGCAGTTCGTTGGCTTTAGCCAGCACCTCTTTTACATCCTTAAACTGATATACATTGCCGAACAATGTGGTCTTTAGTTTCATAAGTCGTTCCCTCAGGAAGAATCGATGATTGGCATTTTTCACAGCATTCTAACAATCACGtt > 2:558529/1‑250 (MQ=255) gCGGATGTCCTCTCCGGTCATTCCCGACACCCCCTGC‑TTTCCCGCCGCGCGCTCCTGTGAGCTTGCCGCTGCGACGCCCGCCAGCACATCCCCCGAACGCAGTTCGTTGGCTTTAGCCAGCACCTCTTTTACATCCTTAAACTGATATACATTGCCGAACAATGTGGTCTTTAGTTTCATAAGTCGTTCCCTCAGGAAGAATCGATGATTGGCATTTTTCACAGCATTCTAACAATCACGTTTCATCGt < 1:264521/249‑1 (MQ=255) cGGTCATTCCCGACACCCCCTGC‑TTTGCCGCCACGCGCTCCTGTGAGCTTGCCGCTGCGACGCCCGCCAGCACATCCCCCGAACGCAGTTCGTTGGCTTTAGCCAGCACCTCTTTTACATCCTTAAACTGATATACATTGCCGAACAATGTGGTCTTTAGTTTCATAAGTCGTTCCCTCAGGAAGAATCGATGATTGGCATTTTTCACAGCATTCTAACAATCACGTTTCATCGTCAGCCCTTGTCgtg < 1:116979/249‑1 (MQ=255) cGGTCATTCCCGACACCACCTGC‑TTTGCCCCCCCGCGCTCCTGTGAGCTTGCCGCTGCGACGCCCGCCAGCACATCCCCCGAACGCAGTTCGTTGGCTTTAGCCAGCACCTCTTTTACATCCTTAAACTGATATACATTGCCGAACAATGTGGTCTTTAGTTTCATAAGTCGTTCCCTCAGGAAGAATCGATGATTGGCATTTTTCACAGCATTCTAACAATCACGTTTCATCGTCAGCCCTTGTCgtg < 1:521850/249‑1 (MQ=255) ggTCATTTCCGACACCCCCTGC‑TTGCCCGCCCCGCGCGCCGGGGGGCTTGCCGCTGCCGCGCCCGCCAGCACATCCCCCGAACGCAGTTCGTTGGCTTTAGCCAGCACCTCTTTTACATCCTTAAACTGATATACATTGCCGAACAATGTGGTCTTTAGTTTCATAAGTCGTTCCCTCAGGAAGAATCGATGATTGGCATTTTTCACAGCATTCTAACAATCACGTTTCATCGTCAGCCCTTGTCGTGTa < 2:26935/250‑1 (MQ=255) ggTCATTTCCGACAACACCTGC‑TTTGCCGCCACGCGCTCCTGTGAGCTTGCCGCTGCGACGCCCGCCAGCACATCCCCCGAACGCAGTTCGTTGGCTTTAGCCAGCACCTCTTTTACATCCTTAAACTGATATACATTGCCGAACAATGTGGTCTTTAGTTTCATAAGTCGTTCCCTCAGGAAGAATCGATGATTGGCATTTTTCACAGCATTCTAACAATCACGTTTCATCGTCAGCCCTTGTCgtgt > 1:365255/1‑249 (MQ=255) aTTTCCGACAACACCTGC‑TTTGCCGCCACGCGCTCCTGTGAGCTTGCCGCTGCGACGCCCGCCAGCACATCCCCCGAACGCAGTTCGTTGGCTTTAGCCAGCACCTCTTTTACATCCTTAAACTGATATACATTGCCGAACAATGTGGTCTTTAGTTTCATAAGTCGTTCCCTCAGGAAGAATCGATGATTGGCATTTTTCACAGCATTCTAACAATCACGTTTCATCGTCAGCCCTTGTCGTGTAAggt > 1:52489/1‑250 (MQ=255) ccGACAACCCCTGC‑TTTGCCGCCCCGCGCTCCTGTGAGCTTGCCGCTGCGACGCCCGCCAGCACATCCCCCGAACGCAGTTCGTTGGCTTTAGCCAGCACCTCTTTTACATCCTTAAACTGATATACATTGCCGAACAATGTGGTCTTTAGTTTCATAAGTCGTTCCCTCAGGAAGAATCGATGATTGGCATTTTTCACAGCATTCTAACAATCACGTTTCATCGTCAGCCCTTGTCGTGTAAggtggt < 1:51140/249‑1 (MQ=255) cGACACCCCCTGC‑TTTGCCGCCACGCGCTCCTGTGAGCTTGCCGCTGCGACGCCCGCCAGCACATCCCCCGAACGCAGTTCGTTGGCTTTAGCCAGCACCTCTTTTACATCCTTAAACTGATATACATTGCCGAACAATGTGGTCTTTAGTTTCATAAGTCGTTCCCTCAGGAAGAATCGATGATTGGCATTTTTCACAGCATTCTAACAATCACGTTTCATCGTCAGCCCTTGTCGTGTAAGGTGGTTg < 1:443772/250‑1 (MQ=255) cGACAACCCCTGC‑TTTGCCCCCCCGCGCTCCTGTGAGCTTGCCGCTGCGACGCCCGCCAGCACATCCCCCGAACGCAGTTCGTTGGCTTTAGCCAGCACCTCTTTTACATCCTTAAACTGATATACATTGCCGAACAATGTGGTCTTTAGTTTCATAAGTCGTTCCCTCAGGAAGAATCGATGATTGGCATTTTTCACAGCATTCTAACAATCACGTTTCATCGTCAGCCCTTGTCGTGTAAGGTGGtt < 1:510564/249‑1 (MQ=255) cGACAACACCTGC‑TTTGCCGCCACGCGCTCCTGTGAGCTTGCCGCTGCGACGCCCGCCAGCACATCCCCCGAACGCAGTTCGTTGGCTTTAGCCAGCACCTCTTTTACATCCTTAAACTGATATACATTGCCGAACAATGTGGTCTTTAGTTTCATAAGTCGTTCCCTCAGGAAGAATCGATGATTGGCATTTTTCACAGCATTCTAACAATCACGTTTCATCGTCAGCCCTTGTCGTGTAAGGTGGTTg < 1:480676/250‑1 (MQ=255) aacaCCTGC‑TTTGCCGCCACGCGCTCCTGTGAGCTTGCCGCTGCGACGCCCGCCAGCACATCCCCCGAACGCAGTTCGTTGGCTTTAGCCAGCACCTCTTTTACATCCTTAAACTGATATACATTGCCGAACAATGTGGTCTTTAGTTTCATAAGTCGTTCCCTCAGGAAGAATCGATGATTGGCATTTTTCACAGCATTCTAACAATCACGTTTCATCGTCAGCCCTTGTCGTGTAAGGTGGTTGCCt > 1:519526/1‑249 (MQ=255) | TTGGAGCAAATCTTCGCTACCGCCGCGACCACTTCCGAGGTCAGCCCTTTGCGGGTAAAGGCAATGTCGTCCACGCTGGTTTCATCGCTCAGCACATACTCACGCAGTTCGCTGATGCTCCAGTTTTTAATCTGGTTGTAGGCCGTTTCGTTAACATCGTCCTGAATCAGCCGCGTCACGCAGTCATCTTCATAGGCAATCACCGGATTATTGCGGATGTCCGCTACGGTCATTTCCGACAACACCTGC‑TTTGCCGCCACGCGCTCCTGTGAGCTTGCCGCTGCGACGCCCGCCAGCACATCCCCCGAACGCAGTTCGTTGGCTTTAGCCAGCACCTCTTTTACATCCTTAAACTGATATACATTGCCGAACAATGTGGTCTTTAGTTTCATAAGTCGTTCCCTCAGGAAGAATCGATGATTGGCATTTTTCACAGCATTCTAACAATCACGTTTCATCGTCAGCCCTTGTCGTGTAAGGTGGTTGCCT > NZ_CP009273/2551647‑2552135 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |