| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NZ_CP009273 | 2,319,929 | 0 | T | G | 50.0% | 54.7 / 17.2 | 46 | G114G (GGT→GGG) | atoB | acetyl‑CoA acetyltransferase |
| Reads supporting (aligned to +/- strand): ref base T (1/22); new base G (23/0); total (24/22) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 5.83e-12 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
| Rejected as consensus: Frequency below/above cutoff threshold. | |||||||||||
TTGAACGTGCAAAAATCGATTCACAACACGTTGATGAAGTGATTATGGGTAACGTGTTACAAGCCGGGCTGGGGCAAAATCCGGCGCGTCAGGCACTGTTAAAAAGCGGGCTGGCAGAAACGGTGTGCGGATTCACGGTCAATAAAGTATGTGGTTCGGGTCTTAAAAGTGTGGCGCTTGCCGCCCAGGCCATTCAGGCAGGTCAGGCGCAGAGCATTGTGGCGGGGGGTATGGAAAATATGA‑GTTTAGCCCCCTACTTACTCGATGCAAAAGCACGCTCTGGTTATCGTCTTGGAGACGGA‑CAGGTTTATGACGTAATCCTGCGCGATGGCCTGATGTGCGCCACCCATGGTTATCATATGGGGATTACCGCC‑GAAAACGTGGCTAAAGAGTACGGAATTACCC‑GTGAAATGCAGGATGAACTGGCGCTACATTCACAGCGTAAAGCGGCAGCCGCAATTGAGTCCGGTGCTT > NZ_CP009273/2319700‑2320173 | ttGAACGTGCAAAAATCGATTCACAACACGTTGATGAAGTGATTATGGGTAACGTGTTACAAGCCGGGCTGGGGCAAAATCCGGCGCGTCAGGCACTGTTAAAAAGCGGGCTGGCAGAAACGGTGTGCGGATTCACGGTCAATAAAGTATGTGGTTCGGGTCTTAAAAGTGTGGCGCTTGCCGCCCAGGCCATTCAGGCAGGTCAGGCGCAGAGCATTGTGGCGGGGGGTATGGAAAATATGA‑GTTTAGc < 2:484209/250‑1 (MQ=255)ttGAACGTGCAAAAATCGATTCACAACACGTTGATGAAGTGATTATGGGTAACGTGTTACAAGCCGGGCTGGGGCAAAATCCGGCGCGTCAGGCACTGTTAAAAAGCGGGCTGGCAGAAACGGTGTGCGGATTCACGGTCAATAAAGTATGTGGTTCGGGTCTTAAAAGTGTGGCGCTTGCCGCCCAGGCCATTCAGGCAGGTCAGGCGCAGAGCATTGTGGCGGGGGGTATGGAAAATATGA‑GTTTAGc < 1:129289/250‑1 (MQ=255)ttGAACGTGCAAAAATCGATTCACAACACGTTGATGAAGTGATTATGGGTAACGTGTTACAAGCCGGGCTGGGGCAAAATCCGGCGCGTCAGGCACTGTTAAAAAGCGGGCTGGCAGAAACGGTGTGCGGATTCACGGTCAATAAAGTATGTGGTTCGGGTCTTAAAAGTGTGGCGCTTGCCGCCCAGGCCATTCAGGCAGGTCAGGCGCAGAGCATTGTGGCGGGGGGGATGGGAAATATGA‑GTTTAGc > 1:238428/1‑250 (MQ=255) tGCAAAAATCGATTCACAACACGTTGATGAAGTGATTATGGGTAACGTGTTACAAGCCGGGCTGGGGCAAAATCCGGCGCGTCAGGCACTGTTAAAAAGCGGGCTGGCAGAAACGGTGTGCGGATTCACGGTCAATAAAGTATGTGGTTCGGGTCTTAAAAGTGTGGCGCTTGCCGCCCAGGCCATTCAGGCAGGTCAGGCGCAGAGCATTGTGGCGGGGGGTATGGAAAATATGA‑GTTTAGCCCCCtac < 2:99267/250‑1 (MQ=255) aaaaaTCGATTCACAACACGTTGATGAAGTGATTATGGGTAACGTGTTACAAGCCGGGCTGGGGCAAAATCCGGCGCGTCAGGCACTGTTAAAAAGCGGGCTGGCAGAAACGGTGTGCGGATTCACGGTCAATAAAGTATGTGGTTCGGGTCTTAAAAGTGTGGCGCTTGCCGCCCAGGCCATTCAGGCAGGTCAGGCGCAGAGCATTGTGGCGGGGGGTATGGAAAATATGA‑GTTTAGCCCCCtactta < 2:59502/250‑1 (MQ=255) gATTCACAACACGTTGATGAAGTGATTATGGGTAACGTGTTACAAGCCGGGCTGGGGCAAAATCCGGCGCGTCAGGCACTGTTAAAAAGCGGGCTGGCAGAAACGGTGTGCGGATTCACGGTCAATAAAGTATGTGGTTCGGGTCTTAAAAGTGTGGCGCTTGCCGCCCAGGCCATTCAGGCAGGTCAGGCGCAGAGCATTGTGGCGGGGGGGGTGGGAAAAATGG‑GGTTATCCCCCcaccttatcgagg > 2:13568/1‑240 (MQ=255) tCACAACACGTTGATGAAGTGATTATGGGTAACGTGTTACAAGCCGGGCTGGGGCAAAATCCGGCGCGTCAGGCACTGTTAAAAAGCGGGCTGGCAGAAACGGTGTGCGGATTCACGGTCAATAAAGTATGTGGTTCGGGTCTTAAAAGTGTGGCGCTTGCCGCCCAGGCCATTCAGGCAGGTCAGGCGCAGAGCATTGTGGCGGGGGGGGTGGGAAAAATGG‑GGTTTGACCCCCCCTTACTCGATGcc > 2:627740/1‑248 (MQ=255) tgatgaAGTGATTATGGGTAACGTGTTACAAGCCGGGCTGGGGCAAAATCCGGCGCGTCAGGCACTGTTAAAAAGCGGGCTGGCAGAAACGGTGTGCGGATTCACGGTCAATAAAGTATGTGGTTCGGGTCTTAAAAGTGTGGCGCTTGCCGCCCAGGCCATTCAGGCAGGTCAGGCGCAGAGCATTGTGGCGGGGGGGGGGGGAAAAATAA‑GGTTAGCCCCCCCCTTACTCGCTGCACAAGCACGcccc > 2:291950/1‑247 (MQ=255) tgatgaAGTGATTATGGGTAACGTGTTACAAGCCGGGCTGGGGCAAAATCCGGCGCGTCAGGCACTGTTAAAAAGCGGGCTGGCAGAAACGGTGTGCGGATTCACGGTCAATAAAGTATGTGGTTCGGGTCTTAAAAGTGTGGCGCTTGCCGCCCAGGCCATTCAGGCAGGTCAGGCGCAGAGCATTGTGGCGGGGGGGATGGGAAATATGA‑GTTTAGCCCCCTACTTACTCGATGCAAAAGCACGctct > 1:42046/1‑250 (MQ=255) gatgaAGTGATTATGGGTAACGTGTTACAAGCCGGGCTGGGGCAAAATCCGGCGCGTCAGGCACTGTTAAAAAGCGGGCTGGCAGAAACGGTGTGCGGATTCACGGTCAATAAAGTATGTGGTTCGGGTCTTAAAAGTGTGGCGCTTGCCGCCCAGGCCATTCAGGCAGGTCAGGCGCAGAGCATTGTGGCGGGGGGGATGGAAAAAATGA‑GGTTAGCCCCCCACTTACTTGGTGCAAAAACACGCCCTg > 1:27263/1‑250 (MQ=255) aGTGATTATGGGTAACGTGTTACAAGCCGGGCTGGGGCAAAATCCGGCGCGTCAGGCACTGTTAAAAAGCGGGCTGGCAGAAACGGTGTGCGGATTCACGGTCAATAAAGTATGTGGTTCGGGTCTTAAAAGTGTGGCGCTTGCCGCCCAGGCCATTCAGGCAGGTCAGGCGCAGAGCATTGTGGCGGGGGGGATGGGAAAAATGAGGTTTGCCCCCCTATTTA‑TCGAGGCAAAAGAAAGCTCTGGTTAt > 1:382181/1‑250 (MQ=255) gATTATGGGTAACGTGTTACAAGCCGGGCTGGGGCAAAATCCGGCGCGTCAGGCACTGTTAAAAAGCGGGCTGGCAGAAACGGTGTGCGGATTCACGGTCAATAAAGTATGTGGTTCGGGTCTTAAAAGTGTGGCGCTTGCCGCCCAGGCCATTCAGGCAGGTCAGGCGCAGAGCATTGTGGCGGGGGGGATGGGAAATATGA‑GTTTAGCCCCCCACTTACTCGATGCAAAAACACGCTCTGGGTATCGt > 1:224997/1‑250 (MQ=255) tAACGTGTTACAAGCCGGGCTGGGGCAAAATCCGGCGCGTCAGGCACTGTTAAAAAGCGGGCTGGCAGAAACGGTGTGCGGATTCACGGTCAATAAAGTATGTGGTTCGGGTCTTAAAAGTGTGGCGCTTGCCGCCCAGGCCATTCAGGCAGGTCAGGCGCAGAGCATTGTGGCGGGGGGTATGGAAAATATGA‑GTTTAGCCCCCTACTTACTCGATGCAAAAGCACGCTCTGGTTATCGTCTTGGAGAc < 2:512493/250‑1 (MQ=255) cGTGTTACAAGCCGGGCTGGGGCAAAATCCGGCGCGTCAGGCACTGTTAAAAAGCGGGCTGGCAGAAACGGTGTGCGGATTCACGGTCAATAAAGTATGTGGTTCGGGTCTTAAAAGTGTGGCGCTTGCCGCCCAGGCCATTCAGGCAGGTCAGGCGCAGAGCATTGTGGCGGGGGGTATGGAAAATATGA‑GTTTAGCCCCCTACTTACTCGATGCAAAAGCACGCTCTGGTTATCGTCTTGGAGACGGa < 2:218399/250‑1 (MQ=255) cGTGTTACAAGCCGGGCTGGGGCAAAATCCGGCGCGTCAGGCACTGTTAAAAAGCGGGCTGGCAGAAACGGTGTGCGGATTCACGGTCAATAAAGTATGTGGTTCGGGTCTTAAAAGTGTGGCGCTTGCCGCCCAGGCCATTCAGGCAGGTCAGGCGCAGAGCATTGTGGCGGGGGGGCTGGTAAATATGA‑GTTTACCCCCCCACTTACTTCCTGGCAAAGCACGCTCTGGTTACCGGCtttaagaacg > 1:616563/1‑241 (MQ=255) tgtTACAAGCCGGGCTGGGGCAAAATCCGGCGCGTCAGGCACTGTTAAAAAGCGGGCTGGCAGAAACGGTGTGCGGATTCACGGTCAATAAAGTATGTGGTTCGGGTCTTAAAAGTGTGGCGCTTGCCGCCCAGGCCATTCAGGCAGGTCAGGCGCAGAGCATTGTGGCGGGGGGTATGGAAAATATGA‑GTTTAGCCCCCTACTTACTCGATGCAAAAGCACGCTCTGGTTATCGTCTTGGAGACGGA‑Ca < 1:409670/250‑1 (MQ=255) aaGCCGGGCTGGGGCAAAATCCGGCGCGTCAGGCACTGTTAAAAAGCGGGCTGGCAGAAACGGTGTGCGGATTCACGGTCAATAAAGTATGTGGTTCGGGTCTTAAAAGTGTGGCGCTTGCCGCCCAGGCCATTCAGGCAGGTCAGGCGCAGAGCATTGTGGCGGGGGGTATGGGAAATATGA‑GTTTAGCCCCCTACTTACTCGATGCAAAAGCACGCTCTGGTTATCGTCTTGGAGACGGA‑CAGGTTTa > 1:402672/1‑250 (MQ=255) aaaaTCCGGCGCGTCAGGCACTGTTAAAAAGCGGGCTGGCAGAAACGGTGTGCGGATTCACGGTCAATAAAGTATGTGGTTCGGGTCTTAAAAGTGTGGCGCTTGCCGCCCAGGCCATTCAGGCAGGTCAGGCGCAGAGCATTGTGGCGGGGGGGATGGAAAAAAATA‑GTTTAGCCCCCCACTCTCTCGATGCGAAAGCACGACATCGTTATCGTCTTTGAGGCGGAGCAGG‑TTATGAccgactactccg > 2:681854/1‑239 (MQ=255) gTCAGGCACTGTTAAAAAGCGGGCTGGCAGAAACGGTGTGCGGATTCACGGTCAATAAAGTATGTGGTTCGGGTCTTAAAAGTGTGGCGCTTGCCGCCCAGGCCATTCAGGCAGGTCAGGCGCAGAGCATTGTGGCGGGGGGGGTGGGAAAAATGA‑GTTTAGGCCCCCCCTTACTCGAGGCGAAAAAACGCCCTGGGTTTAGTCTTGGGGACGGG‑CAGGGTTATGAGGTAATACTGcgcggggggccggg > 2:172216/1‑240 (MQ=255) aGGCACTGTTAAAAAGCGGGCTGGCAGAAACGGTGTGCGGATTCACGGTCAATAAAGTATGTGGTTCGGGTCTTAAAAGTGTGGCGCTTGCCGCCCAGGCCATTCAGGCAGGTCAGGCGCAGAGCATTGTGGCGGGGGGTATGGAAAATATGA‑GTTTAGCCCCCTACTTACTCGATGCAAAAGCACGCTCTGGTTATCGTCTTGGAGACGGA‑CAGGTTTATGACGTAATCCTGCGCGATGGCCTGAtgt < 2:164117/249‑1 (MQ=255) ggCACTGTTAAAAAGCGGGCTGGCAGAAACGGTGTGCGGATTCACGGTCAATAAAGTATGTGGTTCGGGTCTTAAAAGTGTGGCGCTTGCCGCCCAGGCCATTCAGGCAGGTCAGGCGCAGAGCATTGTGGCGGGGGGGATGGAAAATATGA‑GTTTAGCCCCCTACTTACTCGATGCAAAAGCACGCTCTGGTTATCGTCTTGGAGACGGA‑CAGGTTTATGACGTAATCCTGCGCGATGGCCTGATGTgc > 1:674262/1‑250 (MQ=255) cTGTTAAAAAGCGGGCTGGCAGAAACGGTGTGCGGATTCACGGTCAATAAAGTATGTGGTTCGGGTCTTAAAAGTGTGGCGCTTGCCGCCCAGGCCATTCAGGCAGGTCAGGCGCAGAGCATTGTGGCGGGGGGGATGGGAAAAATGA‑GTTTAGCCCCCTACTTACTCGATGCAAAAGCACGCTCTGGTTATCGTCTTTGAGACGGA‑CAGGGTTATGACGTAATACTGCGCGATGGGCCGATGTGCGCCa > 2:621096/1‑250 (MQ=255) tAAAAAGCGGGCTGGCAGAAACGGTGTGCGGATTCACGGTCAATAAAGTATGTGGTTCGGGTCTTAAAAGTGTGGCGCTTGCCGCCCAGGCCATTCAGGCAGGTCAGGCGCAGAGCATTGTGGCGGGGGGGGTGGAAAATAAGT‑GATTAACCCCCCGCTTACTCGGTGCAAAAACACGCCCGGGTTATCGTATTGGAGACGAG‑CAGGGTTATGACGTACTCCTGCGCGATGGACTGGTGTGCGGCAcccc > 2:453942/1‑249 (MQ=255) aCGGTCAATAAAGTATGTGGTTCGGGTCTTAAAAGTGTGGCGCTTGCCGCCCAGGCCATTCAGGCAGGTCAGGCGCAGAGCATTGTGGCGGGGGGGGTGGGAAATATGA‑GTTTAGCCCCCTACTTTCTCGATGCAAAAGCACGCCCTGGTTATCGTCTTGGGGAAGGA‑CAGGGTTATGACGTAATCCTGCGCGGTGGCCTGATTTGCGCCACCCAAGGTTTTCATATGGGGATTACCGCCGGAAAACggg > 2:314759/1‑248 (MQ=255) tgtgGTTCGGGTCTTAAAAGTGTGGCGCTTGCCGCCCAGGCCATTCAGGCAGGTCAGGCGCAGAGCATTGTGGCGGGGGGTATGGAAAATATGA‑GTTTAGCCCCCTACTTACTCGATGCAAAAGCACGCTCTGGTTATCGTCTTGGAGACGGA‑CAGGTTTATGACGTAATCCTGCGCGATGGCCTGATGTGCGCCACCCATGGTTATCATATGGGGATTACCGCC‑GAAAACGTGGCTAAAGAGTACGGaa < 2:680296/250‑1 (MQ=255) tgGTTCGGGTCTTAAAAGTGTGGCGCTTGCCGCCCAGGCCATTCAGGCAGGTCAGGCGCAGAGCATTGTGGCGGGGGGTATGGAAAATATGA‑GTTTAGCCCCCTACTTACTCGATGCAAAAGCACGCTCTGGTTATCGTCTTGGAGACGGA‑CAGGTTTATGACGTAATCCTGCGCGATGGCCTGATGTGCGCCACCCATGGTTATCATATGGGGATTACCGCC‑GAAAACGTGGCTAAAGAGTACGGAAt < 1:295565/249‑1 (MQ=255) aaaaGTGTGGCGCTTGCCGCCCAGGCCATTCAGGCAGGTCAGGCGCAGAGCATTGTGGCGGGGGGGGTGGGAAATATGA‑GGTTTGCCCCCTACTTACTCGATGCAAAAACACGCCCTGGGTATTGTCTTGGGGACGGG‑CAGGGTTATGACGTAATCCTGCGCGATGGCCTGATGTGCGCCACCCATGGTTATCATATGGGGGTTAACCCC‑GAAAAAGTGGCTAAAGAAGAAGGAAATACCC‑GGTAAATg > 2:247507/1‑249 (MQ=255) gtgtGGCGCTTGCCGCCCAGGCCATTCAGGCAGGTCAGGCGCAGAGCATTGTGGCGGGGGGGATGGTGAAAAGTA‑GTTTTGACCCCCACTTTGTCGTTCTAAAAAGACAGCCTGCGTTTAGTCATGGGGGCCGA‑CAGGGTTATGTCGGTATCCTGCGCGATTGCCCCACGCGCGCCACCCACGGTTGTCTTCTGGGGGTTACCCCC‑GAAAACCTTGCGCAAGAGCACGGGATTACCC‑GGCAAAAGCCGGa > 2:651174/1‑250 (MQ=255) gcgcTTGCCGCCCAGGCCATTCAGGCAGGTCAGGCGCAGAGCATTGGGGCGGGGGGTATGGAAAATATGA‑GTTTAGCCCCCTACTTACTCGATGCAAAAGCACGCTCTGGTTATCGTCTTGGAGACGGA‑CAGGTTTATGACGTAATCCTGCGCGATGGCCTGATGTGCGCCACCCATGGTTATCATATGGGGATTACCGCC‑GAAAACGTGGCTAAAGAGTACGGAATTACCC‑GTGAAATGCAGGATGaa < 2:102881/249‑1 (MQ=255) gcTTGCCGCCCAGGCCATTCAGGCAGGTCAGGCGCAGAGCATTGTGGCGGGGGGTATGGAAAATATGA‑GTTTAGCCCCCTACTTACTCGATGCAAAAGCACGCTCTGGTTATCGTCTTGGAGACGGA‑CAGGTTTATGACGTAATCCTGCGCGATGGCCTGATGTGCGCCACCCATGGTTATCATATGGGGATTACCGCC‑GAAAACGTGGCTAAAGAGTACGGAATTACCC‑GTGAAATGCAGGATGAACTg < 1:13568/250‑1 (MQ=255) gcTTGCCGCCCAGGCCATTCAGGCAGGTCAGGCGCAGAGCATTGTGGCGGGGGGGATGGAAAATATGA‑GTTTAGCCCCCTACTTACTCGATGCAAAAGCACGCTCTGGTTATCGTCTTGGAGACGGA‑CAGGTTTATGACGTAATCCTGCGCGATGGCCTGATGTGCGCCACCCCTGGTTATCATATGGGGATTACCGCC‑GAAAACGTGGCTAAAGAGGAAGGAATTAACC‑GTGAAATGCAGGATGAACTg > 1:181168/1‑250 (MQ=255) cTTGCCGCCCAGGCCATTCAGGCAGGTCAGGCGCAGAGCATTGTGGCGGGGGGTATGGAAAATATGA‑GTTTAGCCCCCTACTTACTCGATGCAAAAGCACGCTCTGGTTATCGTCTTGGAGACGGA‑CAGGTTTATGACGTAATCCTGCGCGATGGCCTGATGTGCGCCACCCATGGTTATCATATGGGGATTACCGCC‑GAAAACGTGGCTAAAGAGTACGGAATTACCC‑GTGAAATGCAGGATGAACTgg < 1:34135/250‑1 (MQ=255) cggccCGGGCCATTCAGGCGGGTCGGGGGCGGAGCATTGTGGCGGGGGGTATGGAAAATAGGA‑GTTTAGCCCCATGCTTACTCGATGCAAAAGCACGCTCTGGTTAGCGGCTTGGAGACGGA‑CAGGTTTATGACGTAATCCTGCGCGATGGCCTGAGGTGCGCCACCCATGGTTATCATATGGGGATTACCGCC‑GAAAACGTGGCTAAAGAGTACGGAATTACCC‑GTGAAATGCAGGATGAACTGGCGCt < 2:353455/248‑1 (MQ=255) cgccCAGGCCATTCAGGCAGGTCAGGCGCAGAGCATTGTGGCGGGGGGTATGGAAAATATGA‑GTTTAGCCCCCTACTTACTCGATGCAAAAGCACGCTCTGGTTATCGTCTTGGAGACGGA‑CAGGTTTATGACGTAATCCTGCGCGATGGCCTGATGTGCGCCACCCATGGTTATCATATGGGGATTACCGCC‑GAAAACGTGGCTAAAGAGTACGGAATTACCC‑GTGAAATGCAGGATGAACTGGCGCTa < 1:2018/250‑1 (MQ=255) gccCAGGCCATTCAGGCAGGTCAGGCGCAGAGCATTGTGGCGGGGGGGATGGAAAATATGA‑GTTTAGCCCCCTACTTACTCGATGCAAAAGCACGCTCTGGTTATCGTCTTGGGGACGGA‑CAGGGTTATGACGTAATCCTGCGCGATGGCCTGATGTGCGCCACCCATGGTTATCATATGGGGATTACCGCC‑GAAAACGTGGCTAAAGAGTACGGAATTACCC‑GTGAAATGCAGGATGAACTGGCGCTa > 1:602728/1‑249 (MQ=255) gCCATTCAGGCAGGTCAGGCGCAGAGCATTGTGGCGGGGGGGATGGGAAAAATTA‑GTTTTGCCCCCCACTTTATCGATGCAAAAACACGCTCTGGTTATTGTCTTGGGGACGGG‑CAGGGTTTTGGAGTAATCCTCCGCGATGGCCCGATGTGGGGCCCCCATGGTTATCCTATGGGGGTTACCCCC‑GAAAAAAGGGGTAAAAAGGACGGAAATACCCGGGGAAATGC‑GGAGGAACTGGCGCCACATTcac > 2:465599/1‑250 (MQ=255) aTTCAGGCAGGTCAGGCGCAGAGCATTGTGGCGGGGGGGATGGGAAATATGA‑GGTTAGCCCCCTACTTACTCGATGCAAAAGCACGCTCTGGGTATCGTCTTGGAGACGGA‑CAGGGTTATGACGTAATCCTGCGCGATGGCCTGATGTGGGCCACCCATGGGTATCATATGGGGGTTACCGCC‑GAAAACGGGGGTAAAGAGGAAGGAATTAACC‑GTGAAATGCAGGATGAACTGGGGCTACATTCACAGc > 1:598645/1‑250 (MQ=255) aggcaggTCAGGCGCAGAGCATTGTGGCGGGGGGTATGGAAAATATGA‑GTTTAGCCCCCTACTTACTCGATGCAAAAGCACGCTCTGGTTATCGTCTTGGAGACGGA‑CAGGTTTATGACGTAATCCTGCGCGATGGCCTGATGTGCGCCACCCATGGTTATCATATGGGGATTACCGCC‑GAAAACGTGGCTAAAGAGTACGGAATTACCC‑GTGAAATGCAGGATGAACTGGCGCTACATTCACAGCGTaa < 1:293399/250‑1 (MQ=255) caggTCAGGCGCAGAGCATTGTGGCGGGGGGTATGGAAAATATGA‑GTTTAGCCCCCTACTTACTCGATGCAAAAGCACGCTCTGGTTATCGTCTTGGAGACGGA‑CAGGTTTATGACGTAATCCTGCGCGATGGCCTGATGTGCGCCACCCATGGTTATCATATGGGGATTACCGCC‑GAAAACGTGGCTAAAGAGTACGGAATTACCC‑GTGAAATGCAGGATGAACTGGCGCTACATTCACAGCGTAAAGc < 1:350722/250‑1 (MQ=255) ggTCAGGCGCAGAGCATTGTGGCGGGGGGGATGGAAAATATGA‑GTTTAGCCCCCTCCTTACTCGATGCAAAAGCACGCTCTGGGTATCGTCTTGGAGACGGG‑CAGGGTTATGACGTAATCCCGCGCGGTGGCCCGATGTGCGCCACCCCTGGGTATCATATGGGGGTTACCGCC‑GGAAAAGTGGGTTAAGAGTACGGGATTACCC‑GTGGAAAGCCGGATGAAATTGCGCTACATTCACAgacgaaaccgg > 2:632869/1‑240 (MQ=255) tCAGGCGCAGAGCATTGTGGCGGGGGGTATGGAAAATATGA‑GTTTAGCCCCCTACTTACTCGATGCAAAAGCACGCTCTGGTTATCGTCTTGGAGACGGA‑CAGGTTTATGACGTAATCCTGCGCGATGGCCTGATGTGCGCCACCCATGGTTATCATATGGGGATTACCGCC‑GAAAACGTGGCTAAAGAGTACGGAATTACCC‑GTGAAATGCAGGATGAACTGGCGCTACATTCACAGCGTAAAGCGGCa < 2:264981/250‑1 (MQ=255) agCATTGTGGCGGGGGGGATGGAAAAAATGA‑GTTTAGCCCCCTACTTACTCGATGCAAAAACACGCTCTGGGTATCGTCTTGGAGACGGA‑CAGGTTTATGACGTAATCCTGCGCGATGGCCTGATGTGCGCCACCCCTGGTTATCATATGGGGATTACCGCC‑GCAAACGTGGGTAAAGAGGACGGAATTACCC‑GGGAAATGCAGGATGAACTGGCGGTACATTCACAGCGGAAAGCGGCAGCCGCAAtt > 2:639351/1‑249 (MQ=255) aTTGTGGCGGGGGGTATGGAAAATATGA‑GTTTAGCCCCCTACTTACTCGATGCAAAAGCACGCTCTGGTTATCGTCTTGGAGACGGA‑CAGGTTTATGACGTAATCCTGCGCGATGGCCTGATGTGCGCCACCCATGGTTATCATATGGGGATTACCGCC‑GAAAACGTGGCTAAAGAGTACGGAATTACCC‑GTGAAATGCAGGATGAACTGGCGCTACATTCACAGCGTAAAGCGGCAGCCGCAATTGAGt < 1:464469/250‑1 (MQ=255) gtgGCGGGGGGTATGGAAAATATGA‑GTTTAGCCCCCTACTTACGCGATGCAAAAGCACGCTCTGTTTATCGTCTTGGAGACGGA‑CAGGTTTATGACGTAATCCTGCGCGATGGCCTGATGTGCGCCACCCATGGTTATCATATGGGGATTACCGCC‑GAAAACGTGGCTAAAGAGTACGGAATTACCC‑GTGAAATGCAGGATGAACTGGCGCTACATTCACAGCGTAAAGCGGCAGCCGCAATTGAGTcc < 1:432169/249‑1 (MQ=255) gCGGGGGGTATGGAAAATATGA‑GTTTAGCCCCCTACTTACTCGATGCAAAAGCACGCTCTGGTTATCGTCTTGGAGACGGA‑CAGGTTTATGACGTAATCCTGCGCGATGGCCTGATGTGCGCCACCCATGGTTATCATATGGGGATTACCGCC‑GAAAACGTGGCTAAAGAGTACGGAATTACCC‑GTGAAATGCAGGATGAACTGGCGCTACATTCACAGCGTAAAGCGGCAGCCGCAATTGAGTCCGGTg < 1:554547/250‑1 (MQ=255) gggggTATGGAAAATATGA‑GTTTAGCCCCCTACTTACTCGATGCAAAAGCACGCTCTGGTTATCGTCTTGGAGACGGA‑CAGGTTTATGACGTAATCCTGCGCGATGGCCTGATGTGCGCCACCCATGGTTATCATATGGGGATTACCGCC‑GAAAACGTGGCTAAAGAGTACGGAATTACCC‑GTGAAATGCAGGATGAACTGGCGCTACATTCACAGCGTAAAGCGGCAGCCGCAATTGAGTCCGGTGCtt < 2:9623/250‑1 (MQ=255) | TTGAACGTGCAAAAATCGATTCACAACACGTTGATGAAGTGATTATGGGTAACGTGTTACAAGCCGGGCTGGGGCAAAATCCGGCGCGTCAGGCACTGTTAAAAAGCGGGCTGGCAGAAACGGTGTGCGGATTCACGGTCAATAAAGTATGTGGTTCGGGTCTTAAAAGTGTGGCGCTTGCCGCCCAGGCCATTCAGGCAGGTCAGGCGCAGAGCATTGTGGCGGGGGGTATGGAAAATATGA‑GTTTAGCCCCCTACTTACTCGATGCAAAAGCACGCTCTGGTTATCGTCTTGGAGACGGA‑CAGGTTTATGACGTAATCCTGCGCGATGGCCTGATGTGCGCCACCCATGGTTATCATATGGGGATTACCGCC‑GAAAACGTGGCTAAAGAGTACGGAATTACCC‑GTGAAATGCAGGATGAACTGGCGCTACATTCACAGCGTAAAGCGGCAGCCGCAATTGAGTCCGGTGCTT > NZ_CP009273/2319700‑2320173 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |