Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NZ_CP0092731,598,4940CT47.4% 37.0 / 14.7 38S64L (TCG→TTG) lsrDautoinducer 2 ABC transporter permease LsrD
Reads supporting (aligned to +/- strand):  ref base C (3/17);  new base T (18/0);  total (21/17)
Fisher's exact test for biased strand distribution p-value = 4.02e-08
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00
Rejected as consensus: Frequency below/above cutoff threshold.

CGCCACCGCCATCCGTTAAACCCGCTTCGTCAGGTAAAAAACGGGAGGCCGCATAATGCGTATTCGCTACGGTTGGGAACTGGCTCTTGCCGCACTGCTCGTTATTGAGATTGTCGCATTTGGTGCAATTAACCCGCGAATGTTAGATCTCAATATGTTGCTGTTCAGCACCAGTGACTTTATCTGCATTGGCATTGTCGCCCTACCGCTAACGATGGTGATTGTCAGTGGCGGGATCGATATTTCGTTTGGTTCGACCATCGGCCTCTGCGCCATTGCATTGGGCGTACTGTTTCAAAGTGGTGTGCCGATGCCGCTGGCGATACTCCTGACCTTACTGCTCGGCGCATTGTGCGGGCTGATCAACGCCGGATTAATTATCTATACCAAAGTTAACCCGCTGGTGATTACGCTTGGCACGCTGTATCTGTTTGCCGGAAGCGCTCTGCTGCTTTCCGGTATGGCCGGAGCGACGGGGTACGAAGGTATTGGTG  >  NZ_CP009273/1598249‑1598742
                                                                                                                                                                                                                                                     |                                                                                                                                                                                                                                                        
cGCCACCGCCATCCGTTAAACCCGCTTCGTCAGGTAAAAAACGGGAGGCCGCATAATGCGTATTCGCTACGGTTGGGAACTGGCTCTTGCCGCACTGCTCGTTATTGAGATTGTCGCATTTGGTGCAATTAACCCGCGAATGTTAGATCTCAATATGTTGCTGTTCAGCACCAGTGACTTTATCTGCATTGGCATTGTCGCCCTACCGCTAACGATGGTGATTGTCAGTGGCGGGATCGATATTTCGttt                                                                                                                                                                                                                                                      <  2:374890/250‑1 (MQ=255)
                     ccGCTTCGTCAGGTAAAAAACGGGAGGCCGCATAATGCGTATTCGCTACGGTTGGGAACTGGCTCTTGCCGCACTGCTCGTTATTGAGATTGTCGCATTTGGTGCAATTAACCCGCGAATGTTAGATCTCAATATGTTGCTGTTCAGCACCAGTGACTTTATCTGCATTGGCATTGTCGCCCTACCGCTAACGATGGTGATTGTCAGTGGCGGGATCGATATTTCGTTTGGTTCGACCATCGGCCTCTgc                                                                                                                                                                                                                                 <  2:292181/250‑1 (MQ=255)
                       gCTTCGTCAGGTAAAAAACGGGAGGCCGCATAATGCGTATTCGCTACGGTTGGGAACTGGCTCTTGCCGCACTGCTCGTTATTGAGATTGTCGCATTTGGTGCAATTAACCCGCGAATGTTAGATCTCAATATGTTGCTGTTCAGCACCAGTGACTTTATCTGCATTGGCATTGTCGCCCTACCGCTAACGATGGTGATTGTCAGTGGCGGGATCGATATTTTGTTTGGTTCGACCATCGGCCTCTgcgc                                                                                                                                                                                                                               >  1:5892/1‑250 (MQ=255)
                            gTCAGGTAAAAAACGGGAGGCCGCATAATGCGTATTCGCTACGGTTGGGAACTGGCTCTTGCCGCACTGCTCGTTATTGAGATTGTCGCATTTGGTGCAATTAACCCGCGAATGTTAGATCTCAATATGTTGCTGTTCAGCACCAGTGACTTTATCTGCATTGGCATTGTCGCCCTACCGCTAACGATGGTGATTGTCAGTGGCGGGATCGATATTTCGTTTGGTTCGACCATCGGCCTCTGCGCcatt                                                                                                                                                                                                                           <  2:371478/249‑1 (MQ=255)
                            gTCAGGTAAAAAACGGGAGGCCGCATAATGCGTATTCGCTACGGTTGGGAACTGGCTCTTGCCGCACTGCTCGTTATTGAGATTGTCGCATTTGGTGCAATTAACCCGAGAATGTTAGATCTCAATATGTTGCTGTTCAGCACCAGTGACTTTATCTGCATTGGCATTGTCGCCCTACCGCTAACGATGGTGATTGTCAGTGGCGGGAACGAAAATTTGTTTGGTTCGGCGATCGGCCTCCGCGGcaatg                                                                                                                                                                                                                          >  1:525679/1‑250 (MQ=255)
                              cAGGTAAAAAACGGGAGGCCGCATAATGCGTATTCGCTACGGTTGGGAACTGGCTCTTGCCGCACTGCTCGTTATTGAGATTGTCGCATTTGGTGCAATTAACCCGCGAATGTTAGATCTCAATATGTTGCTGTTCAGCACCAGTGACTTTATCTGCATTGGCATTGTCGCCCTACCGCTAACGATGGTGATTGTCAGTGGCGGGGTTGATATTTTTTTTTGTTTGGCCCTCGGCCCCCTCGCcattgcc                                                                                                                                                                                                                        >  2:355219/1‑249 (MQ=255)
                                  tAAAAAACGGGAGGCCGCATAATGCGTATTCGCTACGGTTGGGAACTGGCTCTTGCCGCACTGCTCGTTATTGAGATTGTCGCATTTGGTGCAATTAACCCGCGAATGTTAGATCTCAATATGTTGCTGTTCAGCACCAGTGACTTTATCTGCATTGGCATTGTCGCCCTACCGCTAACGATGGTGATTGTCAGTGGCGGGGTGGGTAATTTGGTTGGTTCGGCCATACGGCTCTgcggccgtgcctttg                                                                                                                                                                                                                    >  2:432498/1‑238 (MQ=255)
                                    aaaaaCGGGAGGCCGCATAATGCGTATTCGCTACGGTTGGGAACTGGCTCTTGCCGCACTGCTCGTTATTGAGATTGTCGCATTTGGTGCAATTAACCCGCGAATGTTAGATCTCAATATGTTGCTGTTCAGCACCAGTGACTTTATCTGCATTGGCATTGTCGCCCTACCGCTAACGATGGTGATTGTCAGTGGCGGGATCGGTATTTTGTTTTGTTTGACCATCGGCCTCTGCGCCATTGCATTGGGc                                                                                                                                                                                                                  >  1:509223/1‑250 (MQ=255)
                                        aCGGGAGGCCGCATAATGCGTATTCGCTACGGTTGGGAACTGGCTCTTGCCGCACTGCTCGTTATTGAGATTGTCGCATTTGGTGCAATTAACCCGCGAATGTTAGATCTCAATATGTTGCTGTTCAGCACCAGTGACTTTATCTGCATTGGCATTGTCGCCCTACCGCTAACGATGGTGATTGTCAGTGGCGGGATCGATATTTCGTTTGGTTCGACCATCGGCCTCTGCGCCATTGCATTGGGCGTAc                                                                                                                                                                                                              <  2:51787/250‑1 (MQ=255)
                                                 cGCATAATGCGTATTCGCTACGGTTGGGAACTGGCTCTTGCCGCACTGCTCGTTATTGAGATTGTCGCATTTGGTGCAATTAACCCGCGAATGTTAGATCTCAATATGTTGCTGTTCAGCACCAGTGACTTTATCTGCATTGGCATTGTCGCCCTACCGCTAACGATGGTGATTGTCAGTGGCGGGATCGATATTTTGTTTTGTTCGACCATCGGCCTCTGCGCCATTTCATTTGGCGGACTGttttt                                                                                                                                                                                                       >  1:359445/1‑246 (MQ=255)
                                                                       gTTGGGAACTGGCTCTTGCCGCACTGCTCGTTATTGAGATTGTCGCATTTGGTGCAATTAACCCGCGAATGTTAGATCTCAATATGTTGCTGTTCAGCACCAGTGACTTTATCTGCATTGGCATTGTCGCCCTACCGCTAACGATGGTGATTGTCAGTGGCGGGATCGATATTTCGTTTGGTTCGACCATCGGCCTCTGCGCCATTGCATTGGGCGTACTGTTTCAAAGTGGTGTGCCGATGCCGCTGGc                                                                                                                                                                               <  1:185680/250‑1 (MQ=255)
                                                                       gTTGGGAACTGGCTCTTGCCGCACTGCTCGTTATTGAGATTGTCGCATTTGGTGCAATTAACCCGCGAATGTTAGATCTCAATATGTTGCTGTTCAGCACCAGTGACTTTATCTGCATTGGCATTGTCGCCCTACCGCTAACGATGGTGATTGTCAGTGGCGGGATCGATATTTCGTTTGGTTCGACCATCGGCCTCTGCGCCATTGCATTGGGCGTACTGTTTCAAAGTGGTGTGCCGATGCCGCTGGc                                                                                                                                                                               <  2:303956/250‑1 (MQ=255)
                                                                               cTGGCTCTTGCCGCACTGCTCGTTATTGAGATTGTCGCATTTGGTGCAATTAACCCGCGAATGTTAGATCTCAATATGTTGCTGTTCAGCACCAGTGACTTTATCTGCATTGGCATTGTCGCCCTACCGCTAACGATGGTGATTGTCAGTGGCGGGATCGATATTTCGTTTGGTTCGACCATCGGCCTCTGCGCCATTGCATTGGGCGTACTGTTTCAAAGTGGTGTGCCGATGCCGCTGGCGATACTcc                                                                                                                                                                       <  2:94375/250‑1 (MQ=255)
                                                                                tGGCTCTTGCCGCACTGCTCGTTATTGAGATTGTCGCATTTGGTGCAATTAACCCGCGAATGTTAGATCTCAATATGTTGCTGTTCAGCACCAGTGACTTTATCTGCATTGGCATTGTCGCCCTACCGCTAACGATGGTGATTGTCAGTGGCGGGATCGATATTTTGTTTTGTTCGACCCTCGGCCTCTGCGCCATTGCATTGGGCGGACTGTTTTAAAGTGGTGTGCCGGTGCCGCTGGGGGTACTCCt                                                                                                                                                                      >  1:60998/1‑250 (MQ=255)
                                                                                   ctctTGCCGCACTGCTCGTTATTGAGATTGTCGCATTTGGTGCAATTAACCCGCGAATGTTAGATCTCAATATGTTGCTGTTCAGCACCAGTGACTTTATCTGCATTGGCATTGTCGCCCTACCGCTAACGATGGTGATTGTCAGTGGCGGGATCGGTATTTTGTTTGGTTTGACCATCCGGCCCCGCGCCATTGCATTGGGGGTACTGTTTCAAAGAGGTGTGGCCATGCCGCTGGCGGTACTCCTGAc                                                                                                                                                                   >  1:139032/1‑250 (MQ=255)
                                                                                   ctctTGCCGCACTGCTCGTTATTGAGATTGTCGCATTTGGTGCAATTAACCCGCGAATGTTAGATCTCAATATGTTGCTGTTCAGCACCAGTGACTTTATCTGCATTGGCATTGTCGCCCTACCGCTAACGATGGTGATTGTCAGTGGCGGGATCGATATTTCGTTTGGTTCGACCATCGGCCTCTGCGCCATTGCATTGGGCGTACTGTTTCAAAGTGGTGTGCCGATGCCGCTGGCGATACTCCTGAc                                                                                                                                                                   <  1:203580/250‑1 (MQ=255)
                                                                                        gCCGCACTGCTCGTTATTGAGATTGTCGCATTTGGTGCAATTAACCCGCGAATGTTAGATCTCAATATGTTGCTGTTCAGCACCAGTGACTTTATCTGCATTGGCATTGTCGCCCTACCGCTAACGATGGTGATTGTCAGTGGCGGGATCGATATTTCGTTTGGTTCGACCATCGGCCTCTGCGCCATTGCATTGGGCGTACTGTTTCAAAGTGGTGTGCCGATGCCGCTGGCGATACTCCTGACCtt                                                                                                                                                                <  2:587600/248‑1 (MQ=255)
                                                                                              cTGCTCGTTATTGAGATTGTCGCATTTGGTGCAATTAACCCGCGAATGTTAGATCTCAATATGTTGCTGTTCAGCACCAGTGACTTTATCTGCATTGGCATTGTCGCCCTACCGCTAACGATGGTGATTGTCAGTGGCGGGATCGATATTTTGTTTGGTTCGACCATCGGCCTCTGCGCCATTTCATTTGGCGGACTGTTTTAAAGTGGGGTGGCGAAGCCGCCGGCGGTACTCCTTACCTTACTGCTCg                                                                                                                                                        >  1:494746/1‑250 (MQ=255)
                                                                                                         tGAGATTGTCGCATTTGGTGCAATTAACCCGCGAATGTTAGATCTCAATATGTTGCTGTTCAGCACCAGTGACTTTATCTGCATTGGCATTGTCGCCCTACCGCTAACGATGGTGATTGTCAGTGGCGGGATCGGTATTTTGTTTGGTTCGGCCCTCCGCCTCTGCGCCATTGCATTTGGCGTACTGTTTCTAAGTGGGGTGCCGATGCCGCTGGCGGTACCCCTTACCCTTCTGCTCGGCGCATTGTGc                                                                                                                                             >  1:253493/1‑250 (MQ=255)
                                                                                                              ttGTCGCATTTGGTGCAATTAACCCGCGAATGTTAGATCTCAATATGTTGCTGTTCAGCACCAGTGACTTTATCTGCATTGGCATTGTCGCCCTACCGCTAACGATGGTGATTGTCAGTGGCGGGATTGATATTTTGTTTGGGTCGTCCCTCGGCCCCTGCGGCATTGCCTTGGGCGTGCTGTTTCAAAGTGGGGGGGCGGTGCCGGTGGCGCTACTCCCTTCCTTACTGCCTGGCGCCTTTTGCggggc                                                                                                                                        >  2:44502/1‑248 (MQ=255)
                                                                                                                                ttAACCCGCGAATGTTAGATCTCAATATGTTGCTGTTCAGCACCAGTGACTTTATCTGCATTGGCATTGTCGCCCTACCGCTAACGATGGTGATTGTCAGTGGCGGGATCGATATTTCGTTTGGTTCGACCATCGGCCTCTGCGCCATTGCATTGGGCGTACTGTTTCAAAGTGGTGTGCCGATGCCGCTGGCGATACTCCTGACCTTACTGCTCGGCGCATTGTGCGGGCTGATCAACGCCGGattaat                                                                                                                      <  1:196011/250‑1 (MQ=255)
                                                                                                                                         gAATGTTAGATCTCAATATGTTGCTGTTCAGCACCAGTGACTTTATCTGCATTGGCATTGTCGCCCTACCGCTAACGATGGTGATTGTCAGTGGCGGGATCGATATTTCGTTTGGTTCGACCATCGGCCTCTGCGCCATTGCATTGGGCGTACTGTTTCAAAGTGGTGTGCCGATGCCGCTGGCGATACTCCTGACCTTACTGCTCGGCGCATTGTGCGGGCTGATCAACGCCGGATTAATTATCTATAc                                                                                                             <  1:637966/250‑1 (MQ=255)
                                                                                                                                            tGTTAGATCTCAATATGTTGCTGTTCAGCACCAGTGACTTTATCTGCATTGGCATTGTCGCCCTACCGCTAACGATGGTGATTGTCAGTGGCGGGATCGATATTTTGTTTTGTTCTGCCATCGGCCCCTGCGCCATTGCATTTGGCGGACTGTTTCAAAGGGGGGTGCCGCTGCCGCTGGCGGTACTCCTTACCTTACTGCTCGGCGCCTTGTGCGGGCTGGTCAAACCCGGGTTAATTTTTTATACCa                                                                                                           >  1:84378/1‑249 (MQ=255)
                                                                                                                                              ttAGATCTCAATATGTTGCTGTTCAGCACCAGTGACTTTATCTGCATTGGCATTGTCGCCCTACCGCTAACGATGGTGATTGTCAGTGGCGGGATCGATATTTTGTTTGGTTTGACCATCCGCCCCTGCGCCATTGCATTGGGCGGACTGTTTCAAAGTGGGGGGCCGATGCCGCTGGCGATACTCCTGACCTTACTGCTCGGCGCCTTGTGCGGGCTGATCAACGCCGGGTTTATTATCTATACCAAAg                                                                                                        >  1:23095/1‑250 (MQ=255)
                                                                                                                                                cgATCTCACTATGTTGCTGTTCAGCACCAGTGACTTTATCTGCATTGGCATTGTCGCCCTACCGCTAACGATGGTGATTGTCAGTGGCGGGATCGTTTTTTTTTTTTGTTCTCCCCTCCGCCCCTTCCCCCTTTCTTTTTGCTTACTGTTTTTTTCTTGTGGGCCCCTCCCCCTTGCGCTTCTCCTGCCCTTTCTTCTTCGCGCCTTTTGCGGGCTGCTCTACCCCCCCTTTTTTATCTATAcccccctt                                                                                                      >  2:335134/2‑244 (MQ=255)
                                                                                                                                                  aTCTCAATATGTTGCTGTTCAGCACCAGTGACTTTATCTGCATTGGCATTGTCGCCCTACCGCTAACGATGGTGATTGTCAGTGGCGGGGTCGATATTTTGTTTTGTTCGACCATCGGCCTCTGCGCCCTTGCATTTGGCGTTCTGTTTTTAAGCGGTGTGGCCGTGCCCCTGGCGGTACTCCTGGCCTTTCTGCTCGGCGCCTTGGGTGGGCTGGTTAACGCCGGGTTAATTTTTTTTACCCAAAttg                                                                                                     >  2:147584/1‑248 (MQ=255)
                                                                                                                                                  aTCTCAATATGTTGCTGTTCAGCACCAGTGACTTTATCTGCATTGGCATTGTCGCCCTACCGCTAACGATGGTGATTGTCAGTGGCGGGATCGATATTTCGTTTTGTTCGACCATCGGCCTCTGCGCCCTTGCATTTGGCGTACTGTTTCCAAGTGGGGTGCCGATGCCGCTGGCGATACTCCTGACCTTACTGCTCGGCGCATTGTGCGGGCTGATCAACGCCGGGTTAATTATCTATACCAAAGTTa                                                                                                     >  1:170904/1‑249 (MQ=255)
                                                                                                                                                       aaTATGTTGCTGTTCAGCACCAGTGACTTTATCTGCATTGGCATTGTCGCCCTACCGCTAACGATGGTGATTGTCAGTGGCGGGATCGATATTTCGTTTGGTTCGACCATCGGCCTCTGCGCCATTGCATTGGGCGTACTGTTTCAAAGTGGTGTGCCGATGCCGCTGGCGATACTCCTGACCTTACTGCTCGGCGCATTGTGCGGGCTGATCAACGCCGGATTAATTATCTATACCAAAGTTAAccc                                                                                                 <  1:101140/248‑1 (MQ=255)
                                                                                                                                                                     cAGCACCAGTGACTTTATCTGCATTGGCATTGTCGCCCTACCGCTAACGATGGTGATTGTCAGTGGCGGGATCGATATTTCGTTTGGTTCGACCATCGGCCTCTGCGCCATTGCATTGGGCGTACTGTTTCAAAGTGGTGTGCCGATGCCGCTGGCGATACTCCTGACCTTACTGCTCGGCGCATTGTGCGGGCTGATCAACGCCGGATTAATTATCTATACCAAAGTTAACCCGCTGGTGATTACGCt                                                                                  <  2:561479/249‑1 (MQ=255)
                                                                                                                                                                      aGCACCAGTGACTTTATCTGCATTGGCATTGTCGCCCTACCGCTAACGATGGTGATTGTCAGTGGCGGGATCGATATTTCGTTTGGTTCGACCATCGGCCTCTGCGCCATTGCATTGGGCGTACTGTTTCAAAGTGGTGTGCCGATGCCGCTGGCGATACTCCTGACCTTACTGCTCGGCGCATTGTGCGGGCTGATCAACGCCGGATTAATTATCTATACCAAAGTTAACCCGCTGGTGATTACGCtt                                                                                 <  1:261182/249‑1 (MQ=255)
                                                                                                                                                                         aCCAGTGACTTTATCTGCATTGGCATTGTCGCCCTACCGCTAACGATGGTGATTGTCAGTGGCGGGATCGATATTTCGTTTGGTTCGACCATCGGCCTCTGCGCCATTGCATTGGGCGTACTGTTTCAAAGTGGTGTGCCGATGCCGCTGGCGATACTCCTGACCTTACTGCTCGGCGCATTGTGCGGGCTGATCAACGCCGGATTAATTATCTATACCAAAGTTAACCCGCTGGTGATTACGCTTGGCa                                                                             <  1:510836/250‑1 (MQ=255)
                                                                                                                                                                            aGTGACTTTATCTGCATTGGCATTGTCGCCCTACCGCTAACGATGGTGATTGTCAGTGGCGGGATCGATATTTTTTTTTGTTCGACCCTCCGCCTCCGCCCCCTTGCATTGGGCGGACTGTTTTTAAGTGGGGTGCCGATGCCCCCGGCGGTACCCCTGACCCTACTTTTCCGCGCCTTTTGCGGGGCGATCAACCCCGGGTTAATTATCTCTACCCAAGGTAACCCGCCGGTGATTAccccctgcacgc                                                                          >  2:152768/1‑239 (MQ=255)
                                                                                                                                                                              tGACTTTATCTGCATTGGCATTGTCGCCCTACCGCTAACGATGGTGATTGTCAGTGGCGGGATCGATATTTCGTTTGGTTCGACCATCGGCCTCTGCGCCATTGCATTGGGCGTACTGTTTCAAAGTGGTGTGCCGAt                                                                                                                                                                                        <  1:573745/138‑1 (MQ=255)
                                                                                                                                                                               gACTTTATCTGCATTGGCATTGTCGCCCTACCGCTAACGATGGTGATTGTCAGTGGCGGGATCGATATTTTGTTTGGTTTGACCATCGGCCTCTGCGCCATTGCATTGGGCGTACTGTTTCAAAGTGGGGTGCCGATGCCGCTGGCGATACTCCTGACCTTACTGCTCGGCGCATTGTGCGGGCTGATCAACGCCGGGTTAATTATCTATACCCAAGTTAACCCGCTGGGGATTACGCCTGGCACGCTGt                                                                       >  1:395150/1‑250 (MQ=255)
                                                                                                                                                                                                cattgTCGCCCTACCGCTAACGATGGTGATTGTCAGTGGCGGGATCGATATTTCGTTTGGTTCGACCATCGGCCTCTGCGCCATTGCATTTGGGGGACTGTTTTAAAAGGGTGTGCCGATGCCGCTGGCGGTACTCCTGACCTTACTGCTCGGCGCATTGTGCGGGCTGATCAACGCCGGATTAATTATTTATACCAAAGTTAACCCGCTGGTGATTACGCTTGGCACGCTGTATCTGTTTGCCGGAAgc                                                      >  1:136628/1‑250 (MQ=255)
                                                                                                                                                                                                      cGCCCTACCGCTAACGATGGTGATTGTCAGTGGCGGGATCGATATTTTGTTTGGTTCGACCATCGGCCTCTGCGCCATTGCATTGGGCGGACTGTTTTAAAGGGGGGTGCCGATGCCGCTGGGGGTACTCCTGACCTTACTGCTCGGCGCATTGTGGGGGGTGGTCAACGCCGGATTTATTATCTATACCAAAGGTAAACCGCTGGGGATTACGCTTGGCACGCTGTATCTGTTTGCCGGAAGGGCTctg                                                >  1:223841/1‑250 (MQ=255)
                                                                                                                                                                                                                       tGGTGATTGTCAGTGGCGGGATCGATATTTCGTTTGGTTCGACCATCGGCCTCTGCGCCATTGCATTGGGCGTACTGTTTCAAAGTGGTGTGCCGATGCCGCTGGCGATACTCCTGACCTTACTGCTCGGCGCATTGTGCGGGCTGATCAACGCCGGATTAATTATCTATACCAAAGTTAACCCGCTGGTGATTACGCTTGGCACGCTGTATCTGTTTGCCGGAAGCGCTCTGCTGCTTTCCGGTATGGc                               <  1:19440/250‑1 (MQ=255)
                                                                                                                                                                                                                                                    tCGTTTGGTTCGACCATCGGCCTCTGCGCCATTGCATTGGGCGTACTGTTTCAAAGTGGTGTGCCGATGCCGCTGGCGATACTCCTGACCTTACTGCTCGGCGCATTGTGCGGGCTGATCAACGCCGGATTAATTATCTATACCAAAGTTAACCCGCTGGTGATTACGCTTGGCACGCTGTATCTGTTTGCCGGAAGCGCTCTGCTGCTTTCCGGTATGGCCGGAGCGACGGGGTACGAAGGTATtggtg  >  2:673598/1‑250 (MQ=255)
                                                                                                                                                                                                                                                     |                                                                                                                                                                                                                                                        
CGCCACCGCCATCCGTTAAACCCGCTTCGTCAGGTAAAAAACGGGAGGCCGCATAATGCGTATTCGCTACGGTTGGGAACTGGCTCTTGCCGCACTGCTCGTTATTGAGATTGTCGCATTTGGTGCAATTAACCCGCGAATGTTAGATCTCAATATGTTGCTGTTCAGCACCAGTGACTTTATCTGCATTGGCATTGTCGCCCTACCGCTAACGATGGTGATTGTCAGTGGCGGGATCGATATTTCGTTTGGTTCGACCATCGGCCTCTGCGCCATTGCATTGGGCGTACTGTTTCAAAGTGGTGTGCCGATGCCGCTGGCGATACTCCTGACCTTACTGCTCGGCGCATTGTGCGGGCTGATCAACGCCGGATTAATTATCTATACCAAAGTTAACCCGCTGGTGATTACGCTTGGCACGCTGTATCTGTTTGCCGGAAGCGCTCTGCTGCTTTCCGGTATGGCCGGAGCGACGGGGTACGAAGGTATTGGTG  >  NZ_CP009273/1598249‑1598742

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑