Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NZ_CP0092732,380,3410GA35.3% 106.9 / 42.0 69intergenic (+31/‑72)yfbL/yfbMM28 family metallopeptidase/YfbM family protein
Reads supporting (aligned to +/- strand):  ref base G (3/41);  new base A (24/0);  total (28/41)
Fisher's exact test for biased strand distribution p-value = 1.95e-15
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00
Rejected as consensus: Frequency below/above cutoff threshold.

TACCCCAGGGTTTATTCCCGGTATTGATTTCTCTGACCACCTGAATTATTGGCAACACGATATTCCCGCCATAATGATTACTGACACCGCTTTTTATCGTAATAAACAATACCACTTGCCCGGTGATACCGCAGACAGATTGAATTATCAGAAAATGGCTCAGGTAGTGGATGGTGTTATAACTTTGTTATACAACAGTAAATAATAAAAATTTCTCGAGGCGGGTCCAGAAAAAGCGACATGCACATTTTATTTTCCCTCATCTGTTTTAAGATGCGAAACATGAAATTCAACGGAGGAAAAATAAATGGGAATGATTGGCTATTTTGCAGAAATTGACTCAGAAAAGATTAACCAACTGCTTGAGTCTACTGAAAAACCTTTGATGGATAATATACATGACACGCTTTCAGGATTACGCCGACTGGATATTGATAAACGCTGGGATTTTTTACACTTTGGGCTGACAGGCACCTCTGCTTTT  >  NZ_CP009273/2380106‑2380589
                                                                                                                                                                                                                                              |                                                                                                                                                                                                                                                                 
tACCCCAGGGTTTATTCCCGGTATTGATTTCTCTGACCACCTGAATTATTGGCAACACGATATTCCCGCCATAATGATTACTGACACCGCTTTTTATCGTAATAAACAATACCACTTGCCCGGTGATACCGCAGACAGATTGAATTATCAGAAAATGGCTCAGGTAGTGGATGGTGTTATAACTTTGTTATACAACAGTAAATAATAAAAATTTCTCGAGGCGGGGTAAGAAAAAAAGAAATGAACactt                                                                                                                                                                                                                                                  >  2:289599/1‑250 (MQ=255)
 aCCCCAGGGTTTATTCCCGGTATTGATTTCTCTGACCACCTGAATTATTGGCAACACGATATTCCCGCCATAATGATTACTGACACCGCTTTTTATCGTAATAAACAATACCACTTGCCCGGTGATACCGCAGACAGATTGAATTATCAGAAAATGGCTCAGGTAGTGGATGGTGTTATAACTTTGTTATACAACAGTAAATAATAAAAATTTCTCGAGGCGGGGTCATAAAAAAAGACAAACACaattt                                                                                                                                                                                                                                                 >  2:326787/1‑250 (MQ=255)
   cccATGGTTTATTCCTGATTTGATTTTATCCCACCACAGTAATTAGTGGCAACACTATTTCTCCGCCATAATGATTACTGACACCGCTTTTTATCGTAATAAACAATACCACTTGCCCGGTGATACCGCAGACAGATTGAATTATCAGAAAATGGCTCAGGTAGTGGATGGTGTTATAACTTTGTTATACAACAGTAAATAATAAAAATTTCTCGAGGCGGGTCCAGAAAAAGCGACATGCACattttat                                                                                                                                                                                                                                               <  2:867845/250‑1 (MQ=255)
       gggTTTATTCCCGGTATTGATTTCTCTGACCACCTGAATTATTGGCAACACGATATTCCCGCCATAATGATTACTGACACCGCTTTTTATCGTAATAAACAATACCACTTGCCCGGTGATACCGCAGACAGATTGAATTATCAGAAAATGGCTCAGGTAGTGGATGGTGTTATAACTTTGTTATACAACAGTAAATAATAAAAATTTCTCGAGGCGGGTCCCCAAAAAAAGAAAAAGACatttttttttt                                                                                                                                                                                                                                           >  1:396636/1‑249 (MQ=255)
         gTTTATTCCCGGTATTGATTTCTCTGACCACCTGAATTATTGGCAACACGATATTCCCGCCATAATGATTACTGACACCGCTTTTTATCGTAATAAACAATACCACTTGCCCGGTGATACCGCAGACAGATTGAATTATCAGAAAATGGCTCAGGCAGTGGATGGTGTTATAACTTTGTTATACAACAGTAAATAATAAAAATTTCTCGAGGCGGGTGCCGATAAAAAGACATGTAAatatttttttttc                                                                                                                                                                                                                                         >  2:116938/1‑247 (MQ=255)
              ttCCCGGTATTGATTTCTCTGACCACCTGAATTATTGGCAACACGATATTCCCGCCATAATGATTACTGACACCGCTTTTTATCGTAATAAACAATACCACTTGCCCGGTGATACCGCAGACAGATTGAATTATCAGAAAATGGCTCAGGTAGTGGATGGTGTTATAACTTTGTTATACAACAGTAAATAATAAAAATTTCTCGAGGCGGGTACCATAAAAAAGAAATTAACattttttttttcttcctc                                                                                                                                                                                                                                    >  2:153273/1‑242 (MQ=255)
                 ccGGTATTGATTTCTCTGACCACCTGAATTATTGGCAACACGATATTCCCGCCATAATGATTACTGACACCGCTTTTTATCGTAATAAACAATACCACTTGCCCGGTGATACCGCAGACAGATTGAATTATCAGAAAATGGCTCAGGTAGTGGATGGTGTTATAACTTTGTTATACAACAGTAAATAATAAAAATTTCTCGAGGCGGGTTCAGAAAAAAAGACCATGCAAattttttttttttccatttt                                                                                                                                                                                                                                  >  2:564486/1‑240 (MQ=255)
                  cgttatttattTCTCTACCCACCTAATTTATTGCCACCACGTTTTTCCCGCCATAATGATTACTGACACCGCTTTTTATCGTAATAAACAATACCACTTGCCCGGTGATACCGCAGACAGATTGAATTATCAGAAAATGGCTCAGGTAGTGGATGGTGTTATAACTTTGTTATACAACAGTAAATAATAAAAATTTCTCGAGGCGGGTCCAGAAAAAGCGACATGCACATTTTATTTTCCCTCATCTGtt                                                                                                                                                                                                                               <  1:131371/247‑1 (MQ=255)
                   ggTATTGATTTCTCTGACCACCTGAATTATTGGCAACACGATATTCCCGCCATAATGATTACTGACACCGCTTTTTATCGTAATAAACAATACCACTTGCCCGGTGATACCGCAGACAGATTGAATTATCAGAAAATGGCTCAGGTAGTGGATGGTGTTATAACTTTGTTATACAACAGTAAATAATAAAAATTTCTCGAGGCGGGTCCAGAAAAAACGAAATACAAATTTTTTTTTTCCTCCTCTGttt                                                                                                                                                                                                                              >  2:383027/1‑250 (MQ=255)
                             ttCTCTGCCCCCCTGAATGATTGGCAACACAATATCCCCGCCATAATGATTACTGACACCGCTTTTTATCGTAATAAACAATACCACTTGCCCGGTGATACCGCAGACAGATTGAATTATCAGAAAATGGCTCAGGTAGTGGATGGTGTTATAACTTTGTTATACAACAGTAAATAATAAAAATTTCTCGAGGCGGGTCCAGAAAAAGCGACATGCACATTTTATTTTCCCTCATCTGTTTTAAGATGc                                                                                                                                                                                                                     <  1:1000060/249‑1 (MQ=255)
                             ttCTCTCACCACATGAATTAGTGACACCACAATTTCCCCGCCATAATGATTACTGACACCGCTTTTTATCGTAATAAACAATACCACTTGCCCGGTGATACCGCAGACAGATTGAATTATCAGAAAATGGCTCAGGTAGTGGATGGTGTTATAACTTTGTTATACAACAGTAAATAATAAAAATTTCTCGAGGCGGGTCCAGAAAAAGCGACATGCACATTTTATTTTCCCTCATCTGTTTTAAGATGc                                                                                                                                                                                                                     <  1:531954/249‑1 (MQ=255)
                                 ctacccaccTGAATTATTGCAACAACATATGCCCCGCCATAATGATTACTGACACCGCTTTTTATCGTAATAAACAATACCACTTGCCCGGTGATACCGCAGACAGATTGAATTATCAGAAAATGGCTCAGGTAGTGGATGGTGTTATAACTTTGTTATACAACAGTAAATAATAAAAATTTCTCGAGGCGGGTCCAGAAAAAGCGACATGCACATTTTATTTTCCCTCATCTGTTTTAAGATGCGAAAc                                                                                                                                                                                                               <  2:736799/246‑1 (MQ=255)
                                 ctGACCACCTGAATTATTGGCAACACGATATTCCCGCCATAATGATTACTGACACCGCTTTTTATCGTAATAAACAATACCACTTGCCCGGTGATACCGCAGACAGATTGAATTATCAGAAAATGGCTCAGGTAGTGGATGGTGTTATAACTTTGTTATACAACAGTAAATAATAAAAATTTCTCGAGGCGGGGCCAGAAAAAACGACAAGCAAATTTTTTTTTTTCTCATCtttttttatattcggaa                                                                                                                                                                                                                  >  1:653853/1‑238 (MQ=255)
                                   gcccacaTAAATTATTGAAAACACGATATCCCCGCCATAATGATTACTGACACCGCTTTTTATCGTAATAAACAATACCACTTGCCCGGTGATACCGCAGACAGATTGAATTATCAGAAAATGGCTCAGGTAGTGGATGGTGTTATAACTTTGTTATACAACAGTAAATAATAAAAATTTCTCGAGGCGGGTCCAGAAAAAGCGACATGCACATTTTATTTTCCCTCATCTGTTTTAAGATGCGAAACAt                                                                                                                                                                                                             <  1:341485/248‑1 (MQ=255)
                                           gacttattGCAAACATGATTCTCCCGCCATAATGATTACTGACACCGCTTTTTATCGTAATAAACAATACCACTTGCCCGGTGATACCGCAGACAGATTGAATTATCAGAAAATGGCTCAGGTAGTGGATGGTGTTATAACTTTGTTATACAACAGTAAATAATAAAAATTTCTCGAGGCGGGTCCAGAAAAAGCGACATGCACATTTTATTTTCCCTCATCTGTTTTAAGATGCGAAACATGAAAtt                                                                                                                                                                                                       <  2:270695/245‑1 (MQ=255)
                                            aattatgcacAACACTATATCCCCGCCATAATGATTACTGACACCGCTTTTTATCGTAATAAACAATACCACTTGCCCGGTGATACCGCAGACAGATTGAATTATCAGAAAATGGCTCAGGTAGTGGATGGTGTTATAACTTTGTTATACAACAGTAAATAATAAAAATTTCTCGAGGCGGGTCCAGAAAAAGCGACATGCACATTTTATTTTCCCTCATCTGTTTTAAGATGCGAAACATGAAATTCa                                                                                                                                                                                                     <  2:226355/240‑1 (MQ=255)
                                               tattGGCAACACGATATACCCGCCATAATGATTACTGACACCGCTTTTTATCGTAATAAACAATACCACTTGCCCGGTGATACCGCAGACAGATTGAATTATCAGAAAATGGCTCAGGTAGTGGATGGTGTTATAACTTTGTTATACAACAGTAAATAATAAAAATTTCTCGAGGCGGGTCCAGAAAAAGCGACATGCACATTTTATTTTCCCTCATCTGTTTTAAGATGCGAAACATGAAATTCAACg                                                                                                                                                                                                 <  1:197291/249‑1 (MQ=255)
                                                       aattgATATCCCCGCCATAATGATTACTGACACCGCTTTTTATCGTAATAAACAATACCACTTGCCCGGTGATACCGCAGACAGATTGAATTATCAGAAAATGGCTCAGGTAGTGGATGGTGTTATAACTTTGTTATACAACAGTAAATAATAAAAATTTCTCGAGGCGGGTCCAGAAAAAGCGACATGCACATTTTATTTTCCCTCATCTGTTTTAAGATGCGAAACATGAAATTCAACGGAGGaaaaa                                                                                                                                                                                       <  2:44096/246‑1 (MQ=255)
                                                            atcttCCCGCCATAATGATTACTGACACCGCTTTTTATCGTAATAAACAATACCACTTGCCCGGTGATACCGCAGACAGATTGAATTATCAGAAAATGGCTCAGGTAGTGGATGGTGTTATAACTTTGTTATACAACAGTAAATAATAAAAATTTCTCGAGGCGGGTCCAGAAAAAGCGACATGCACATTTTATTTTCCCTCATCTGTTTTAAGATGCGAAACATGAAATTCAACGGAGGAAaaataaat                                                                                                                                                                                  <  2:551282/247‑1 (MQ=255)
                                                            atatTCCCGCCATAATGATTACTGACACCGCTTTTTATCGTAATAAACAATACCACTTGCCCGGTGATACCGCAGACAGATTGAATTATCAGAAAATGGCTCAGGTAGTGGATGGTGTTATAACTTTGTTATACAACAGTAAATAATAAAAATTTCTCGAGGCGGGTCCAGAAAAAGCGACATGCACATTTTATTTTCCCTCATCTGTTTTAAGATGCGAAACATGAAATTCAACGGAGGAAaaataaat                                                                                                                                                                                  <  1:538250/250‑1 (MQ=255)
                                                              tacccccGCCATAATGATTACTGACACCGCTTTTTATCGTAATAAACAATACCACTTGCCCGGTGATACCGCAGACAGATTGAATTATCAGAAAATGGCTCAGGTAGTGGATGGTGTTATAACTTTGTTATACAACAGTAAATAATAAAAATTTCTCGAGGCGGGTCCAGAAAAAGCGACATGCACATTTTATTTTCCCTCATCTGTTTTAAGATGCGAAACATGAAATTCAACGGAGGAAAAATAAATg                                                                                                                                                                                 <  2:769289/246‑1 (MQ=255)
                                                                   ccGCCATAATGATTACTGACACCGCTTTTTATCGTAATAAACAATACCACTTGCCCGGTGATACCGCAGACAGATTGAATTATCAGAAAATGGCTCAGGTAGTGGATGGTGTTATAACTTTGTTATACAACAGTAAATAATAAAAATTTCTCGAGGCGGGTCCAGAAAAAGCGACATGCACATTTTATTTTCCCTCATCTGTTTTAAGATGCGAAACATGAAATTCAACGGAGGAAAAATAAATggg                                                                                                                                                                               <  2:842801/247‑1 (MQ=255)
                                                                   ccGCCATAATGATTACTGACACCGCTTTTTATCGTAATAAACAATACCACTTGCCCGGTGATACCGCAGACAGATTGAATTATCAGAAAATGGCTCAGGTAGTGGATGGTGTTATAACTTTGTTATACAACAGTAAATAATAAAAATTTCTCGAGGCGGGTCCAGAAAAAACGAAAAACAAAATTTTTTTTTCCTTATTTGTTTTTTTATAGGGAAAATGAAAATTAAAGGAGGGAAAAAAAATggg                                                                                                                                                                               >  2:349448/1‑247 (MQ=255)
                                                                    cGCCATAATGATTACTGACACCGCTTTTTATCGTAATAAACAATACCACTTGCCCGGTGATACCGCAGACAGATTGAATTATCAGAAAATGGCTCAGGTAGTGGATGGTGTTATAACTTTGTTATACAACAGTAAATAATAAAAATTTCTCGAGGCGGGTCCAGAAAAAGCGACATGCACATTTTATTTTCCCTCATCTGTTTTAAGATGCGAAACATGAAATTCAACGGAGGAAAAATAAATGGGAATg                                                                                                                                                                           <  1:565287/250‑1 (MQ=255)
                                                                    cGCCATAATGATTACTGACACCGCTTTTTATCGTAATAAACAATACCACTTGCCCGGTGATACCGCAGACAGATTGAATTATCAGAAAATGGCTCAGGTAGTGGATGGTGTTATAACTTTGTTATACAACAGTAAATAATAAAAATTTCTCGAGGCGGGGTCAAAAAAAAAGGAAAGGACAATTTTTTTTTTCTCATCTTGTTTTATAATCGGAAAATTAAAATTAACCGAGGAAAAAATAAATGGGat                                                                                                                                                                             >  2:480068/1‑248 (MQ=255)
                                                                              aTTACTGACACCGCTTTTTATCGTAATAAACAATACCACTTGCCCGGTGATACCGCAGACAGATTGAATTATCAGAAAATGGCTCAGGTAGTGGATGGTGTTATAACTTTGTTATACAACAGTAAATAATAAAAATTTCTCGAGGCGGGTGCAGAAAAAACGAAAAACACAATTTTTTTTTTCTCCTTTTGTTTAAAATGTGAAAAAATGAAATTAAAGGGGGGAAAAAAAAAGAGGAAGGTTTggattt                                                                                                                                                                  >  2:403505/1‑246 (MQ=255)
                                                                                  cTGACACCGCTTTTTATCGTAATAAACAATACCACTTGCCCGGTGATACCGCAGACAGATTGAATTATCAGAAAATGGCTCAGGTAGTGGATGGTGTTATAACTTTGTTATACAACAGTAAATAATAAAAATTTCTCGAGGCGGGTCCAGAAAAAGCGACATGCACATTTTATTTTCCCTCATCTGTTTTAAGATGCGAAACATGAAATTCAACGGAGGAAAAATAAATGGGAATGATTGGCTATTTTg                                                                                                                                                             <  1:839591/249‑1 (MQ=255)
                                                                                     acacCGCTTTTTATCGTAATAAACAATACCACTTGCCCGGTGATACCGCAGACAGATTGAATTATCAGAAAATGGCTCAGGTAGTGGATGGTGTTATAACTTTGTTATACAACAGTAAATAATAAAAATTTCTCGAGGCGGGTCCAGAAAAAGCGACATGCACATTTTATTTTCCCTCATCTGTTTTAAGATGCGAAACATGAAATTCAACGGAGGAAAAATAAATGGGAATGATTGGCTATTTTGCAg                                                                                                                                                          <  2:792772/249‑1 (MQ=255)
                                                                                          gCTTTTTATCGTAATAAACAATACCACTTGCCCGGTGATACCGCAGACAGATTGAATTATCAGAAAATGGCTCAGGTAGTGGATGGTGTTATAACTTTGTTATACAACAGTAAATAATAAAAATTTCTCGAGGCGGGTCCAGAAAAAGCGACATGTACATTTTATTTTCCCTCATCTGTTTTAAGATGCGAAACATGAAATTCAACGGAGGAAAAATAAATGGGAATGATTGGCTATTTTGCAGAAATTg                                                                                                                                                    <  2:881862/250‑1 (MQ=255)
                                                                                          gCTTTTTATCGTAATAAACAATACCACTTGCCCGGTGATACCGCAGACAGATTGAATTATCAGAAAATGGCTAAGGTAGTGGATGGTGTTATAACTTTGTTATACAACAGTAAATAATAAAAATTTCTCGAGGCGGGTGCAGAAAAAAAGACATGCACAATTTTTTTTTTCCTCTTTGATTTAAGATGTGGAAACAGTAAATATAAGGAGGGAAAATAAATAGGGATGTTTGGGTACTTTCTGGAAAtt                                                                                                                                                     >  1:694593/1‑249 (MQ=255)
                                                                                              tttATCGTAATAAACAATACCACTTGCCCGGTGATACCGCAGACAGATTGAATTATCAGAAAATGGCTCAGGTAGTGGATGGTGTTATAACTTTGTTATACAACAGTAAATAATAAAAATTTCTCGAGGCGGGTCCAGAAAAAGCGACATGCACATTTTATTTTCCCTCATCTGTTTTAAGATGCGAAACATGAAATTCAACGGAGGAAAAATAAATGGGAATGATTGGCTATTTTGCAGAAATTGAc                                                                                                                                                  <  2:314158/248‑1 (MQ=255)
                                                                                                  tCGTAATAAACAATACCACTTGCCCGGTGATACCGCAGACAGATTGAATTATCAGAAAATGGCTCAGGTAGTGGATGGTGTTATAACTTTGTTATACAACAGTAAATAATAAAAATTTCTCGAGGCGGGTCCAGAAAAAGCGACATGCACATTTTATTTTCCCTCATCTGTTTTAAGATGCGAAACATGAAATTCAACGGAGGAAAAATAAATGGGAATGATTGGCTATTTTGCAGAAATTGACTCAGa                                                                                                                                             <  1:632978/249‑1 (MQ=255)
                                                                                                   cGTAATAAACAATACCACTTGCCCGGTGATACCGCAGACAGATTGAATTATCAGAAAATGGCTCAGGTAGTGGATGGTGTTATAACTTTGTTATACAACAGTAAATAATAAAAATTTCTCGAGGCGGGTCCCGAAAAAACGAAATGGACAATTTTTTTTTCCTCTTCTTTTTTTAAATGCGAAAAATAAAAATTAACCGGGGAAAAAAAAATTGGAATGATTGGCCATTTTTTCGAAATTGACTccgca                                                                                                                                            >  1:64982/1‑245 (MQ=255)
                                                                                                        taaACAATACCACTTGCCCGGTGATACCGCAGACAGATTGAATTATCAGAAAATGGCTCAGGTAGTGGATGGTGTTATAACTTTGTTATACAACAGTAAATAATAAAAATTTCTCGAGGCGGGTCCAGAAAAAGCGACATGCACATTTTATTTTCCCTCATCTGTTTTAAGATGCGAAACATGAAATTCAACGGAGGAAAAATAAATGGGAATGATTGGCTATTTTGCAGAAATTGACTCAGAAAAGAtt                                                                                                                                      <  2:932507/250‑1 (MQ=255)
                                                                                                         aaaCAATACCACTTGCCCGGTGATACCGCAGACAGATTGAATTATCAGAAAATGGCTCAGGTAGTGGATGGTGTTATAACTTTGTTATACAACAGTAAATAATAAAAATTTCTCGAGGCGGGTGCCAAAAAAAAGAAATACACAATTTTTTTTTTCTCCTTTTTTTTTATAAGCGAAAAAAAAAAATAAACAGGGGGAAAAAAAAAAGGAAAGATTTGGTTTTTTTTAAGAAATTGATACaaaaaaaag                                                                                                                                       >  2:720708/1‑246 (MQ=255)
                                                                                                               tACCACTTGCCCGGTGATACCGCAGACAGATTGAATTATCAGAAAATGGCTCAGGTAGTGGATGGTGTTATAACTTTGTTATACAACAGTAAATAATAAAAATTTCTCGAGGCGGGTCCAGAAAAAGCGACATGCACATTTTATTTTCCCTCATCTGTTTTAAGATGCGAAACATGAAATTCAACGGAGGAAAAATAAATGGGAATGATTGGCTATTTTGCAGAAATTGACTCAGAAAAGATTAACCAAc                                                                                                                               <  2:320777/250‑1 (MQ=255)
                                                                                                                 ccACTTGCCCGGTGATACCGCAGACAGATTGAATTATCAGAAAATGGCTCAGGTAGTGGATGGTGTTATAACTTTGTTATACAACAGTAAATAATAAAAATTTCTCGAGGCGGGTCCAGAAAAAAAGAAAAGCACATTTTTTTTTTTCTCATCTTTTTTTAAATTGGAAAAAATAAATTTTAAGGGGGGAAAAAAAAAGGGGATGATTTTGTATTTTTTCGGAAATTAGTTAGAAAAAAGTAACCaaata                                                                                                                             >  1:792046/1‑247 (MQ=255)
                                                                                                                   aCTTGCCCGGTGATACCGCAGACAGATTGAATTATCAGAAAATGGCTCAGGTAGTGGATGGTGTTATAACTTTGTTATACAACAGTAAATAATAAAAATTTCTCGAGGCGGGGTCCGAAAAAACGAAAATCAAATTTTTTTTTTCCTCATCTGTTTTAAGATGCGGAAAAAGAAATTTAAAGGGGGGAAAAAAAATAGGGATGATTGGGTTTTTTTGAGAAAATTACTCAGAAAAAAATAAACaaatact                                                                                                                           >  1:693111/1‑245 (MQ=255)
                                                                                                                    cTTGCCCGGTGATACCGCAGACAGATTGAATTATCAGAAAATGGCTCAGGTAGTGGATGGTGTTATAACTTTGTTATACAACAGTAAATAATAAAAATTTCTCGAGGCGGGTCCAGAAAAAGCGACATGCACATTTTATTTTCCCTCATCTGTTTTAAGATGCGAAACATGAAATTCAACGGAGGAAAAATAAATGGGAATGATTGGCTATTTTGCAGAAATTGACTCAGAAAAGATTAACCAACTGCtt                                                                                                                          <  2:61962/250‑1 (MQ=255)
                                                                                                                         ccGGTGATACCGCAGACAGATTGAATTATCAGAAAATGGCTCAGGTAGTGGATGGTGTTATAACTTTGTTATACAACAGTAAATAATAAAAATTTCTCGAGGCGGGGGCCGAAAAAAAGAAAAGGAAAATTTTTTTTTTCTTCTCTTTTTTTAAAATAGGAAAAAGAAATTTAAAGGGGGGAAAAAAAAATGGGATAGATTGGCTTTTTTTTAGAAATTAATCAAGAAAAAATAAACaaaatctttaatt                                                                                                                      >  2:882834/1‑240 (MQ=255)
                                                                                                                            gTGATACCGCAGACAGATTGAATTATCAGAAAATGGCTCAGGTAGTGGATGGTGTTATAACTTTGTTATACAACAGTAAATAATAAAAATTTCTCGAGGCGGGTCCAGAAAAAGCGACATGCACATTTTATTTTCCCTCATCTGTTTTAAGATGCGAAACATGAAATTCAACGGAGGAAAAATAAATGGGAATGATTGGCTATTTTGCAGAAATTGACTCAGAAAAGATTAACCAACTGCTTGAGTCTAc                                                                                                                  <  2:810671/250‑1 (MQ=255)
                                                                                                                             tGATACCGCAGACAGATTGAATTATCAGAAAATGGCTCAGGTAGTGGATGGTGTTATAACTTTGTTATACAACAGTAAATAATAAAAATTTCTCGAGGCGGGTCCAGAAAAAGCGACATGCACATTTTATTTTCCCTCATCTGTTTTAAGATGCGAAACATGAAATTCAACGGAGGAAAAATAAATGGGAATGATTGGCTATTTTGCAGAAATTGACTCAGAAAAGATTAACCAACTGCTTGAGTCTACt                                                                                                                 <  1:518871/250‑1 (MQ=255)
                                                                                                                                  ccGCAGACAGATTGAATTATCAGAAAATGGCTCAGGTAGTGGATGGTGTTATAACTTTGTTATACAACAGTAAATAATAAAAATTTCTCGAGGCGGGTCCAGAAAAAGCGACATGCACATTTTATTTTCCCTCATCTGTTTTAAGATGCGAAACATGAAATTCAACGGAGGAAAAATAAATGGGAATGATTGGCTATTTTGCAGAAATTGACTCAGAAAAGATTAACCAACTGCTTGAGTCTACTGaaaa                                                                                                            <  1:655303/250‑1 (MQ=255)
                                                                                                                                            aTTGAATTATCAGAAAATGGCTCAGGTAGTGGATGGTGTTATAACTTTGTTATACAACAGTAAATAATAAAAATTTCTCGAGGCGGGTGCAGAAAAAACGAAATGCACATTTTTTTTTTTCTTCTCTTTTTTTATAAGAGGAACAAGAAATTTAACAGGGGAAAAATAAAAGGGAATGATTTGGTATTTTTTTGAAATTTAATCCAAAAAAATTAAACAACTGCTTGTGTCTACTTaaaaaacatttttt                                                                                                  >  2:853285/1‑241 (MQ=255)
                                                                                                                                            aTTGAATTATCAGAAAATGGCTCAGGTAGTGGATGGTGTTATAACTTTGTTATACAACAGTAAATAATAAAAATTTCTCGAGGCGGGTCCAGAAAAAGCGACATGCACATTTTATTTTCCCTCATCTGTTTTAAGATGCGAAACATGAAATTCAACGGAGGAAAAATAAATGGGAATGATTGGCTATTTTGCAGAAATTGACTCAGAAAAGATTAACCAACTGCTTGAGTCTACTGAAAAACCTTTGATg                                                                                                  <  1:467264/250‑1 (MQ=255)
                                                                                                                                             ttGAATTATCAGAAAATGGCTCAGGTAGTGGATGGTGTTATAACTTTGTTATACAACAGTAAATAATAAAAATTTCTCGAGGCGGGTCCAGAAAAAGCGACATGCACATTTTATTTTCCCTCATCTGTTTTAAGATGCGAAACATGAAATTCAACGGAGGAAAAATAAATGGGAATGATTGGCTATTTTGCAGAAATTGACTCAGAAAAGATTAACCAACTGCTTGAGTCTACTGAAAAACCTTTGATgg                                                                                                 <  1:87649/250‑1 (MQ=255)
                                                                                                                                             ttGAATTATCAGAAAATGGCTCAGGTAGTGGATGGTGTTATAACTTTGTTATACAACAGTAAATAATAAAAATTTCTCGAGGCGGGTCCAGAAAAAGCGACATGCACATTTTATTTTCCCTCATCTGTTTTAAGATGCGAAACATGAAATTCAACGGAGGAAAAATAAATGGGAATGATTGGCTATTTTGCAGAAATTGACTCAGAAAAGATTAACCAACTGCTTGAGTCTACTGAAAAACCTTTGATgg                                                                                                 <  2:812627/250‑1 (MQ=255)
                                                                                                                                                                  cAGGTAGTGGATGGTGTTATAACTTTGTTATACAACAGTAAATAATAAAAATTTCTCGAGGCGGGTCCAGAAAAAACGACATACACATTTTTTTTTTCCCCATCTGTTTTTAAAAGGGAAAAATAAAAATTAACGGGGGGAAAAAAAATGGGAATGATTGGCTATTTTTCAGAAAATGACTCAAAAAAAATTAAACAACATCTTGAGTTTACTGAAAAAACTTTTATGGGAAAAATACATAAAACGCttt                                                                            >  1:31543/1‑250 (MQ=255)
                                                                                                                                                                       aGTGGATGGTGTTATAACTTTGTTATACAACAGTAAATAATAAAAATTTCTCGAGGCGGGTGCCAAAAAAAAGACAAGCACAATTTTTTTTTCCTCCTCTTTTTTTATATTGGAAAAAAGAAAATTAAAGGGGGAAAAAAAAAAAGGGATGATTGGGTATTTTTTAGAAATTGAATCAGAAAAAATTAAACAACTGCTTTAGTCTACTGAAAAAACTTTTATGGGTAATATAAATGAAACACTTTCATGa                                                                       >  2:380886/1‑250 (MQ=255)
                                                                                                                                                                       aGTGGATGGTGTTATAACTTTGTTATACAACAGTAAATAATAAAAATTTCTCGAGGCGGGTCCAGAAAAAAAGACAAGCACATTTTTTTTTTCCTCCTCTGTTTTAAGAAGGGAAAAATGAAAATTAACGGAGGAAAAAAAAAAGGGAAAGATTGGCTATTTTTCAGAAAATTACTCAGAAAAGATTAACCAAATGCTTGAGTCTACTGAAAAAACCTTGATGGGTAATATAAAATACACGCTTTCAGGa                                                                       >  1:123089/1‑250 (MQ=255)
                                                                                                                                                                         tGGATGGTGTTATAACTTTGTTATACAACAGTAAATAATAAAAATTTCTCGAGGCGGGTCCAGAAAAAGCGACATGCACATTTTATTTTCCCTCATCTGTTTTAAGATGCGAAACATGAAATTCAACGGAGGAAAAATAAATGGGAATGATTGGCTATTTTGCAGAAATTGACTCAGAAAAGATTAACCAACTGCTTGAGTCTACTGAAAAACCTTTGATGGATAATATACATGACACGCTTTCAGGAtt                                                                     <  1:870928/250‑1 (MQ=255)
                                                                                                                                                                               gtgtTATAACTTTGTTATACAACAGTAAATAATAAAAATTTCTCGAGGCGGGTCCAGAAAAAACGACAAGCACAATTTTTTTTTTCTCCTCTGTTTTTTAATGGGGAAAATAAAAATAAACGGAGGGAAAAAAAAAAGGAAAGATTGTCTATTTTTTTGAAATTTAATCACAAAAAATTAAACAACATCTTTAGTGTATAGAAAAACCTTTTATTGATAATATATATGACACCCTTTctgtgttatgcac                                                               >  2:913048/1‑238 (MQ=255)
                                                                                                                                                                                       aCTTTGTTATACAACAGTAAATAATAAAAATTTCTCGAGGCGGGTCCAGAAAAAGCGACATGCACATTTTATTTTCCCTCATCTGTTTTAAGATGCGAAACATGAAATTCAACGGAGGAAAAATAAATGGGAATGATTGGCTATTTTGCAGAAATTGACTCAGAAAAGATTAACCAACTGCTTGAGTCTACTGAAAAACCTTTGATGGATAATATACATGACACGCTTTCAGGATTACGCCGACTGGat                                                        <  1:126982/249‑1 (MQ=255)
                                                                                                                                                                                             ttATACAACAGTAAATAATAAAAATTTCTCGAGGCGGGTCCAGAAAAAACGACAAGCACATTTTTTTTTTCCTCCTCTGTTTTTAGATGCGAAACATGAAATTTAACGGGGGAAAAATAAATGGGGATGATTGGCTATTTTTCAGAAAATGACTCAGAAAAAATTAAACAACTGCTTTAGTCTACTGAAAAAACTTTTATGGATAATATAAATGACACGCTTTCAGGATTACGCCGACTGGATATTGAt                                                  >  1:206089/1‑249 (MQ=255)
                                                                                                                                                                                                taCAACAGTAAATAATAAAAATTTCTCGAGGCGGGTCCAGAAAAAGCGACATGCACATTTTATTTTCCCTCATCTGTTTTAAGATGCGAAACATGAAATTCAACGGAGGAAAAATAAATGGGAATGATTGGCTATTTTGCAGAAATTGACTCAGAAAAGATTAACCAACTGCTTGAGTCTACTGAAAAACCTTTGATGGATAATATACATGACACGCTTTCAGGATTACGCCGACTGGATATTGATaaa                                               <  2:121927/249‑1 (MQ=255)
                                                                                                                                                                                                 acaacaGTAAATAATAAAAATTTCTCGAGGCGGGTCCAGAAAAAGCGACATGCACATTTTATTTTCCCTCATCTGTTTTAAGATGCGAAACATGAAATTCAACGGAGGAAAAATAAATGGGAATGATTGGCTATTTTGCAGAAATTGACTCAGAAAAGATTAACCAACTGCTTGAGTCTACTGAAAAACCTTTGATGGATAATATACATGACACGCTTTCAGGATTACGCCGACTGGATATTGATAAACg                                             <  1:240897/250‑1 (MQ=255)
                                                                                                                                                                                                  caacaGTAAATAATAAAAATTTCTCGAGGCGGGGCCAGAAAAAACGACATGGACATTTTTTTTTTCCTCATCTGTTTTAAGAAGCGAAACAAGAAATTTAAAGGAGGAAAAAAAAATGGGGATGATTTGCTATTTTTCAGAAAATTACTCAGAAAAGATTAACCAAATGCTTGAGTTTACTGAAAAAACTTTTATTGGTAATATAAATGACAAGCTTTCAGGATTAAGCCGACTGGGTATTGATAAACGc                                            >  1:342257/1‑250 (MQ=255)
                                                                                                                                                                                                      aGTAAATAATAAAAATTTCTCGAGGCGGGTCCAGAAAAAAAGAAAAGCACATTTTTTTTTTTCTCATCTTTTTTTAGAAGCGAAACATGAAAATTAACGGAGGGAAAAAAAATGGGGATGATTGGGTATTTTTTAGAAATTTACTCAGAAAAAAATAAACAAATGCTTTAGTCTATTGAAAAACCTTTTTTGGGTAATATACATGACACGCTTTCACGATTTCGCCGACTGGGTTTTGTTAAAAGCTggg                                        >  2:981219/1‑250 (MQ=255)
                                                                                                                                                                                                            taataaAAATTTCTCGAGGCGGGTCCAGAAAAAGCGACATGCACATTTTATTTTCCCTCATCTGTTTTAAGATGCGAAACATGAAATTCAACGGAGGAAAAATAAATGGGAATGATTGGCTATTTTGCAGAAATTGACTCAGAAAAGATTAACCAACTGCTTGAGTCTACTGAAAAACCTTTGATGGATAATATACATGACACGCTTTCAGGATTACGCCGACTGGATATTGATAAACGCTGGGAttttt                                  <  2:572/250‑1 (MQ=255)
                                                                                                                                                                                                                    aTTTCTCGAGGCGGGTCCAGAAAAAGCGACATGCACATTTTATTTTCCCTCATCTGTTTTAAGATGCGAAACATGAAATTCAACGGAGGAAAAATAAATGGGAATGATTGGCTATTTTGCAGAAATTGACTCAGAAAAGATTAACCAACTGCTTGAGTCTACTGAAAAACCTTTGATGGATAATATACATGACACGCTTTCAGGATTACGCCGACTGGATATTGATAAACGCTGGGATTTTTTACACttt                          <  1:518943/250‑1 (MQ=255)
                                                                                                                                                                                                                           gAGGCGGGTCCAGAAAAAGCGACATGCACATTTTATTTTCCCTCATCTGTTTTAAGATGCGAAACATGAAATTCAACGGAGGAAAAATAAATGGGAATGATTGGCTATTTTGCAGAAATTGACTCAGAAAAGATTAACCAACTGCTTGAGTCTACTGAAAAACCTTTGATGGATAATATACATGACACGCTTTCAGGATTACGCCGACTGGATATTGATAAACGCTGGGATTTTTTACACTTTGGGc                      <  1:803108/247‑1 (MQ=255)
                                                                                                                                                                                                                           gAGGCGGGTCCAGAAAAAGCGACATGCACATTTTATTTTCCCTCATCTGTTTTAAGATGCGAAACATGAAATTCAACGGAGGAAAAATAAATGGGAATGATTGGCTATTTTGCAGAAATTGACTCAGAAAAGATTAACCAACTGCTTGAGTCTACTGAAAAACCTTTGATGGATAATATACATGACACGCTTTCAGGATTACGCCGACTGGATATTGATAAACGCTGGGATTTTTTACACTTTGGGCt                     <  2:535208/248‑1 (MQ=255)
                                                                                                                                                                                                                              gCGGGTCCAGAAAAAGCGACATGCACATTTTATTTTCCCTCATCTGTTTTAAGATGCGAAACATGAAATTCAACGGAGGAAAAATAAATGGGAATGATTGGCTATTTTGCAGAAATTGACTCAGAAAAGATTAACCAACTGCTTGAGTCTACTGAAAAACCTTTGATGGATAATATACATGACACGCTTTCAGGATTACGCCGACTGGATATTGATAAACGCTGGGATTTTTTACACTTTGGGCTGACAg                <  1:582606/250‑1 (MQ=255)
                                                                                                                                                                                                                                       cgAAAAAGCGACATGCACATTTTATTTTCCCTCATCTGTTTTAAGATGCGACACATGAAATTCCTCGTAGGACAAATATATGGGAATCATTGGCTATTTTTCAGAACTTGCCTCAGAAAAGATTAACCAACTGCTTGAGTCTACTGAAAAACCTTTGATGGATCATATACATGACACGCTTTCAGGATTAAGCAGACTGGATATTGATAAACGCTGGGCTTTTTTACACTTTGTGCTGACAGGCActact        >  2:26050/2‑246 (MQ=255)
                                                                                                                                                                                                                                       aGAAAAAGCGACATGCACATTTTATTTTCCCTCATCTGTTTTAAGATGCGAAACATGAAATTCAACGGAGGAAAAATAAATGGGAATGATTGGCTATTTTGCAGAAATTGACTCAGAAAAGATTAACCAACTGCTTGAGTCTACTGAAAAACCTTTGATGGATAATATACATGACACGCTTTCAGGATTACGCCGACTGGATATTGATAAACGCTGGGATTTTTTACACTTTGGGCTGACAGGCACctct        <  1:818643/250‑1 (MQ=255)
                                                                                                                                                                                                                                        gAAAAAGCGACATGCACATTTTATTTTCCCTCATCTGTTTTAAGATGCGAAACATGAAATTCAACGGAGGAAAAATAAATGGGAATGATTGGCTATTTTGCAGAAATTGACTCAGAAAAGATTAACCAACTGCTTGAGTCTACTGAAAAACCTTTGATGGATAATATACATGACACGCTTTCAGGATTACGCCGACTGGATATTGATAAACGCTGGGATTTTTTACACTTTGGGCTGACAGGCACCTCTg       >  2:225891/1‑250 (MQ=255)
                                                                                                                                                                                                                                         aaaaaGCGACATGCACATTTTATTTTCCCTCATCTGTTTTAAGATGCGAAACATGAAATTCAACGGAGGAAAAATAAATGGGAATGATTGGCTATTTTGCAGAAATTGACTCAGAAAAGATTAACCAACTGCTTGAGTCTACTGAAAAACCTTTGATGGATAATATACATGACACGCTTTCAGGATTACGCCGACTGGATATTGATAAACGCTGGGATTTTTTACACTTTGGGCTGACAGGCACCTCTGc      >  2:741347/1‑250 (MQ=255)
                                                                                                                                                                                                                                             aGCGACATGCACATTTTATTTTCCCTCATCTGTTTTAAGATGCGAAACATGAAATTCAACGGAGGAAAAATAAATGGGAATGATTGGCTATTTTGCAGAAATTGACTCAGAAAAGATTAACCAACTGCTTGAGTCTACTGAAAAACCTTTGATGGATAATATACATGACACGCTTTCAGGATTACGCCGACTGGATATTGATAAACGCTGGGATTTTTTACACTTTGGGCTGACAGGCACCTCTGCtttt  <  2:688118/250‑1 (MQ=255)
                                                                                                                                                                                                                                             aGCGACATGCACATTTTATTTTCCCTCATCTGTTTTAAGATGCGAAACATGAAATTCAACGGAGGAAAAATAAATGGGAATGATTGGCTATTTTGCAGAAATTGACTCAGAAAAGATTAACCAACTGCTTGAGTCTACTGAAAAACCTTTGATGGATAATATACATGACACGCTTTCAGGATTACGCCGACTGGATATTGATAAACGCTGGGATTTTTTACACTTTGGGCTGACAGGCACCTCTGCtttt  <  1:444717/250‑1 (MQ=255)
                                                                                                                                                                                                                                              |                                                                                                                                                                                                                                                                 
TACCCCAGGGTTTATTCCCGGTATTGATTTCTCTGACCACCTGAATTATTGGCAACACGATATTCCCGCCATAATGATTACTGACACCGCTTTTTATCGTAATAAACAATACCACTTGCCCGGTGATACCGCAGACAGATTGAATTATCAGAAAATGGCTCAGGTAGTGGATGGTGTTATAACTTTGTTATACAACAGTAAATAATAAAAATTTCTCGAGGCGGGTCCAGAAAAAGCGACATGCACATTTTATTTTCCCTCATCTGTTTTAAGATGCGAAACATGAAATTCAACGGAGGAAAAATAAATGGGAATGATTGGCTATTTTGCAGAAATTGACTCAGAAAAGATTAACCAACTGCTTGAGTCTACTGAAAAACCTTTGATGGATAATATACATGACACGCTTTCAGGATTACGCCGACTGGATATTGATAAACGCTGGGATTTTTTACACTTTGGGCTGACAGGCACCTCTGCTTTT  >  NZ_CP009273/2380106‑2380589

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: