Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NZ_CP0092733,776,2730AC32.8% 70.2 / 17.3 68V250G (GTG→GGG) gpsANAD(P)H‑dependent glycerol‑3‑phosphate dehydrogenase
Reads supporting (aligned to +/- strand):  ref base A (14/31);  new base C (2/20);  total (16/52)
Fisher's exact test for biased strand distribution p-value = 6.73e-02
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00
Rejected as consensus: Frequency below/above cutoff threshold.

CACGACCTAGTAAAGTCAATGCTGCCTCGCGCGCGTTTTTTCCGCAATATAATACTTGATAAATTTCCTCGGTTATTGGCATTTCAACGCCGAAG‑CGATGCGCCAGTTCGCGGACTTCTTTCGTATTGCGGTAGCCTTCCACCACCTGACCAATCTTCTCCTGCGCGCTTTGTACATCC‑ATGCCCTGACCGAGCATCATGCCAAAACGGCGGTTACGCGACTGGTTGTCGGTACAGGTAAGCACCAGATCGCCAAG‑CCCCGCCATGCCCATAAAGGTGGCAGGGTCGGCACCCAGCGCCGCACCAAGACGCGACATTTCAGCCAGCCCACGGGTGATCAGCGCCGTACGCGCATTCGCACCAAAACCGATACCGTCGGACATCCCCGCACCAATGGCAATAACGTTTTTCACCGCGCCGCCAAGCTGCACGCCAATGAAATCCGGATTGCTGTAAACGCGGAAACTTTTGCCGCAGTGCAGCAGCTG  >  NZ_CP009273/3776031‑3776517
                                                                                                                                                                                                                                                    |                                                                                                                                                                                                                                                     
cACGACCTAGTAAAGTCAATGCTGCCTCGCGAGCGTTTTTTCCGCAATATAATACTTGATAAATTTCCTCGGTTATTGGCATTTCAACGCCGAAG‑CGATGCGCCAGTTCGCGGACTTCTTTCGTATTGCGGTAGCCTTCCACCACCTGACCAATCTTCTCCTGCGCGCTTTGTACATCC‑ATGCCCTGACCGAGCATCATGCCAAAACGGCGGTTACGCGACTGGTTGTCGGTACAGGTAAGCACCAGATc                                                                                                                                                                                                                                                <  2:1001252/250‑1 (MQ=255)
      cTAGTAAAGTCAATGCTGCCTCGCGCGCGTTTTTTCCGCAATATAATACTTGATAAATTTCCTCGGTTATTGGCATTTCAACGCCGAAG‑CGATGCGCCAGTTCGCGGACTTCTTTCGTATTGCGGTAGCCTTCCACCACCTGACCAATCTTCTCCTGCGCGCTTTGTACATCC‑ATGCCCTGACCGAGCATCATGCCAAAACGGCGGTTACGCGACTGGTTGTCGGTACAGGTAAGCACCAGATCGCCAAg                                                                                                                                                                                                                                          <  2:886570/250‑1 (MQ=255)
            aaGTCAATGCTGCCTCGCGCGCGTTTTTTCCGCAATATAATACTTGATAAATTTCCTCGGTTATTGGCATTTCAACGCCGAAG‑CGATGCGCCAGTTCGCGGACTTCTTTCGTATTGCGGTAGCCTTCCACCACCTGACCAATCTTCTCCTGCGCGCTTTGTACATCC‑ATGCCCTGACCGAGCATCATGCCAAAACGGCGGTTACGCGACTGGTTGTCGGTACAGGTAAGCACCAGATCGCCAAG‑CCCCGc                                                                                                                                                                                                                                   <  2:32515/250‑1 (MQ=255)
                cAATGCTGCCTCGCGCGCGTTTTTTCCGCAATATAATACTTGATAAATTTCCTCGGTTATTGGCATTTCAACGCCGAAG‑CGATGCGCCAGTTCGCGGACTTCTTTCGTATTGAGGTAGCCTTCCACCACCTGACCAATCTTCTCCTGCGCGCTTTGTACATCC‑ATGCCCTGACCGAGCATCATGCCAAAACGGCGGGTACCCCGCCGGTTGTCGGTACCGGGAAGCCACAAAACGCCCAG‑Ccccccccag                                                                                                                                                                                                                               >  2:647438/1‑247 (MQ=255)
                 aaTGCTGCCTCGCGCGCGTTTTTTCCGCAATATAATACTTGATAAATTTCCTCGGTTATTGGCATTTCAACGCCGAAG‑CGATGCGCCAGTTCGCGGACTTCTTTCGTATTGCGGTAGCCTTCCACCACCTGACCAATCTTCTCCTGCGCGCTTTGTACATCC‑ATGCCCTGACCGAGCATCATGCCAAAACGGCGGTTACTCCACTGGGTTTCGGTTCAGGGAAGCACCAAAACGCCCAA‑Cccccccccac                                                                                                                                                                                                                              >  1:441724/1‑246 (MQ=255)
                   tgctgcCTCGCGCGCGTTTTTTCCGCAATATAATACTTGATAAATTTCCTCGGTTATTGGCATTTCAACGCCGAAG‑CGATGCGCCAGTTCGCGGACTTCTTTCGTATTGCGGTAGCCTTCCACCACCTGACCAATCTTCTCCTGCGCGCTTTGTACATCC‑ATGCCCTGACCGAGCATCATGCCAAAACGGCGGTTTAGCCACGGGGTGTCGGGACAGGGAAGCACCAGAATCACAAA‑CCCCCCCATGccc                                                                                                                                                                                                                            >  1:813453/1‑250 (MQ=255)
                       gcCTCGCGCGCGTTTTTTCCGCAATATAATACTTGATAAATTTCCTCGGTTATTGGCATTTCAACGCCGAAG‑CGATGCGCCAGTTCGCGGACTTCTTTCGTATTGCGGTAGCCTTCCACCACCTGACCAATCTTCTCCTGCGCGCTTTGTACATCC‑ATGCCCTGACCGAGCATCATGCCAAAACGGCGGTTACTCGCCTGGTTGTCGGGTCAGGTAAGCACCACAACGCCCAG‑CCCCCCCACGccccca                                                                                                                                                                                                                         >  2:564297/1‑246 (MQ=255)
                                 cgTTTTTTCCGCAATATAATACTTGATAAATTTCCTCGGTTATTGGCATTTCAACGCCGAAG‑CGATGCGCCAGTTCGCGGACTTCTTTCGTATTGCGGTAGCCTTCCACCACCTGACCAATCTTCTCCTGCGCGCTTTGTACATCC‑ATGCCCTGACCGAGCATCATGCCAAAACGGCGGTTTCCCGCCTGGGTTTCCGGGTAAGGAAGCACCAGATAGCCACGCCCCCGCCAGACCCTAAAAGGttca                                                                                                                                                                                                                 >  1:509480/1‑245 (MQ=255)
                                    tttttCCGCAATATAATACTTGATAAATTTCCTCGGTTATTGGCATTTCAACGCCGAAG‑CGATGCGCCAGTTCGCGGACTTCTTTCGTATTGCGGTAGCCTTCCACCACCTGACCAATCTTCTCCTGCGCGCTTTGTACATCC‑ATGCCCTGACCGAGCATCATGCCAAAACGGCGGTTACGCCACTGGGTGTCGGGACAGGGAAGCACCAAATCGCCAAC‑CCCCCCCCCGCCCACAAAGGGGGCAggggg                                                                                                                                                                                                           >  2:117876/1‑248 (MQ=255)
                                        tCCGCAATATAATACTTGATAAATTTCCTCGGTTATTGGCATTTCAACGCCGAAG‑CGATGCGCCAGTTCGCGGACTTCTTTCGTATTGCGGTAGCCTTCCACCACCTGACCAATCTTCTCCTGCGCGCTTTGTACATCC‑ATGCCCTAACCGAGCATCATGCAAAAACGGGGGTTACGCGACTGGTTGTCGGTACAGGTAAGCCCCAGATCGCCAAG‑CCCCGCCATGCCCATAAAGGTGGCAGGGTCGGc                                                                                                                                                                                                        <  1:1054922/249‑1 (MQ=255)
                                        ccctcAATATATTATTTGAAAATTTTCCTGGGTTTTTGGCATTTCAACGCCGAAG‑CGATGCGCCCGTTCGCGGACTTCTTTCGTATTGCGGTAGCCTTCCCCCCCCTGACCATTCTTCCCCTGCGCGCTTTGTACATCC‑ATGCCCGGACCGAGCATCATGCCAAAACGGCGGTTACGCGACTGGTTGGCGGTACGGGTAAGCCCCAGATCGCCAAG‑CCCCGCCATGCCCATAAAGGTGGCAGGGTCGGc                                                                                                                                                                                                        <  2:952756/245‑1 (MQ=255)
                                         ccGCAATATAATACTTGATAAATTTCCTCGGTTATTGGCATTTCAACGCCGAAG‑CGATGCGCCAGTTCGCGGACTTCTTTCGTATTGCGGTAGCCTTCCACCACCTGACCAATCTTCTCCTGCGCGCTTTGTACATCC‑ATGCCCTGACCGAGCATCATGCCAAAACGGCGGTTACGCGACTGGTTGTCGGTACAGGTAAGCACCCGATCGCCAAG‑CCCCCCCACGCCCATAAAGGGGGCCGGGCCGGCAc                                                                                                                                                                                                      >  1:76502/1‑250 (MQ=255)
                                               tataATACTTGATAAATTTCCTCGGTTATTGGCATTTCAACGCCGAAG‑CGATGCGCCAGTTCGCGGACTTCTTTCGTATTGCGGTAGCCTTCCACCACCTGACCAATCTTCTCCTGCGCGCTTTGTACATCC‑ATGCCCTGACCGAGCATCATGCCAAAACGGCGGTTACGCGACTGGGTGTCGGGACAGGGAAGCACCAAATAGCCAAA‑CCCCGCCATGCCCCTAAAGGGGGGCGGGGCGGCACCCAgcg                                                                                                                                                                                                >  1:130077/1‑250 (MQ=255)
                                                 taataCTTGATAAATTTCCTCGGTTATTGGCATTTCAACGCCGAAG‑CGATGCGCCAGTTCGCGGACTTCTTTCGTATTGCGGTAGCCTTCCACCACCTGACCAATCTTCTCCTGCGCGCTTTGTACATCC‑ATGCCCTGACCGAGCATCATGCCAAAACGGCGGTTACCCGACTGGTTGTCGGTACAGGTAAGCCCCAGATACCCAAG‑CCCCGCCCTGCCCCTAAAAGTGGCAAGGGCGGCACCCACcgcc                                                                                                                                                                                              >  1:916471/1‑250 (MQ=255)
                                                 aaagacggtaaaaaTTCCCTCGTTTATTGGCATTTCACCGCCAAGG‑CGAGGCGCCAGTTCGCGGACTTCTTTCGTATGGCGGTACCCTCCCACCACCGGACCAATCTTCTCCTGCGCGCTTTGTACACCC‑ATGCCCTGACCGAGAATCATGCAAAAACGGGGGTTACGGGACTGGTTGTCGGTACAGGTAAGCACAAGATCGCCAAG‑CCCCGCCATGCCCATAAAGGTGGCAGGGTCGGCACCCAGcgcc                                                                                                                                                                                              <  2:234796/239‑1 (MQ=255)
                                                   ataCTTGATAAATTTCCTCGGTTATTGGCATTTCAACGCCGAAG‑CGATGCGCCAGTTCGCGGACTTCTTTCGTATTGCGGTAGCCTTCCACCACCTGACCAATCTTCTCCTGCGCGCTTTGTACATCC‑ATGCCCTGACCGAGCATCATGCCAAAACGGCGGTTACGCGACTGGTTGTTGGTACAGGGAAGCACCAGATCGCCACA‑CCCCCCCCCCCCCCTAAAGGGGGCAGGGGCGGCACCCCGcgcccc                                                                                                                                                                                            >  1:1100752/1‑248 (MQ=255)
                                                   ataCTTGATAAATTTCCTCGGTTATTGGCATTTCAACGCCGAAG‑CGATGCGCCAGTTCGCGGACTTCTTTCGTATTGCGGTAGCCTTCCACCACCTGACCAATCTTCTCCTGCGCGCTTTGTACATCC‑ATGCCCTGACCGAGCATCATGCCAAAACGGCGGTTACGCGACTGGTTGTCGGTACAGGGAAGCACCAGAACGCCAAA‑CCCCGCCCTGCCCATAAAGGTGGCAGGGTCGGCACCCCGcgccgc                                                                                                                                                                                            >  1:1193613/1‑250 (MQ=255)
                                                      cttattAAATTCCCCCTGTT‑TTGGCCTTTCCACGCCCAAGCCGCTCCGCCATTTCGCGGATTTCTTCCTTATGGCGGTAGCTTCCCCCCCCCTGACCACTCTCCTCCTGCGCGTTTTGTACACCC‑ATGCCCTGACCGGCCACCATGCAAAACCGGCGTTTACGCGACTGTTTGTCGGTACGGGTAAGCACCAGACCGCCAGG‑CCCCGCCATGCCCATAAAGGTGGCAGGGTCGGCACCCAGCGCCGCAc                                                                                                                                                                                          <  2:673092/244‑1 (MQ=255)
                                                        tGATAAATTTCCTCGGTTATTGGCATTTCAACGCCGAAG‑CGATGCGCCAGTTCGCGGACTTCTTTCGTATTGCGGTAGCCTTCCACCACCTGACCAATCTTCTCCTGCGCGCTTTGTACATCC‑ATGCCCTGACCGAGCATCATGCCAAAACGGCGGTTACGCGACTGGTTGTTGGTACAGGTAAACACCAGATCGCCCAG‑CCCCCCCACGCCCCTAAAAGGGGCCGGGGCGGGACCCAGCGCCccacca                                                                                                                                                                                        >  1:31761/1‑249 (MQ=255)
                                                          aTAAATTTCCTCGGTTATTGGCATTTCAACGCCGAAG‑CGATGCGCCAGTTCGCGGACTTCTTTCGTATTGCGGTAGCCTTCCACCCCCTGACAAATCTTCTCCTGCGCGCTTTGTACATCC‑ATGCCCTGACCGAGCATCATGCCAAAACGGCGGTTACGCGACTGGTTGTCGGTACAGGTAAGCACCAGATCGCCAAG‑CCCCGCCATGCCCATAAAGGTGGCAGGGTCGGCACCCAGCGCCGCACCAAg                                                                                                                                                                                      <  1:1116856/249‑1 (MQ=255)
                                                           tAAATTTCCTCGGTTATTGGCATTTCAACGCCGAAG‑CGATGCGCCAGTTCGCGGACTTCTTTCGTATTGCGGTAGCCTTCCACCACCTGACCAATCTTCTCCTGCGCGCTTTGTACATCC‑ATGCCCTGACCGAGCATCATGCCAAAACGGCGGTTACGCGACTGGTTGTCGGTACTGGTAAGCACCAGATCGCCAAG‑CCCCGCCATGCCCATAAAGGTGGCAGGGTCGGCACCCAGCGCCGCACCAAGAc                                                                                                                                                                                    <  1:1064322/250‑1 (MQ=255)
                                                              aTTTCCTCGGTTTTTGGCATTTCAACGCCTAAG‑CAATGCGCCAGTTCGCGACCTTTTTTCGTATGGCGGTAGCCTTCCCCCCCCTGACCAATCTTCCCCTGCGCTCTTTGTACATCC‑ATGCCCTGACCGAGCATCAGGCCAAAACGGCGGTTACGCGACTGGTTGTCGGTACAGGTAGGCCCCAGACCGCAAAG‑CCCCGCCATGCCCATAAAGGTGGCAGGGTCGGCACCCAGCGCCGCACCAAGAcgcg                                                                                                                                                                                 <  2:309503/250‑1 (MQ=255)
                                                                  ccTCGTTTTTTGGCTTTTCAACGCCGAGG‑CGATCCGCCAGTTCGCGGACTTCTTTCGTATTGCGGTACCCTCCCCCCCCCTGACCAATCTCCCCCTGCGCGCTTTGTACATCC‑ATGCCCTGACCGAGCATCATGCCAAAACGGCGGTTCCGCGACTGTTTGTCGGTACAGGTAAGCACCAGATCGCCAAG‑CCCCGCCATGCCCATAAAGGTGGCAGGGTCGGCACCCAGCGCCGCACCAAGACGCGACa                                                                                                                                                                              <  2:345095/249‑1 (MQ=255)
                                                                      ggTTATTGGCATTTCAGCGCCGAAG‑CGATGCGCCAGTTCGCGGACTGCTGTCGTATGGCGGTAGCCTTCCCCCCCCTGACCAATCTTCTCCGGCGCGCTTTGTACATCC‑AGGCCCTGACCGAGCATCATGCCAAAACGGCGGTTACGCGACTGGTTGTCGGTACAGGTAAGCCCCAGACCGCCAAG‑CCCCGCCATGCCCATAAAGGTGGCAGGGTCGGCACCCAGCGCCGCACCAAGACGCGACATTTca                                                                                                                                                                         <  2:846735/250‑1 (MQ=255)
                                                                       gTTATTGGCATTTCAACGCCGAAG‑CGATGCGCCAGTTCGCGGACTTCTTTCGTATTGCGGTAGCCTTCCCCCACCTGACCAATCTTCCCCTGCGCGCTTTGTACATCC‑ATGCCCTGACCGAGCATCATGCCAAAACGGCGGTTACGCGACTGGTTGTCGGTACAGGTAAGCACCAGATCGCCAAG‑CCCCGCCATGCCCATAAAGGTGGCAGGGTCGGCACCCAGCGCCGCACCAAGACGCGACATTTcag                                                                                                                                                                        <  1:916831/250‑1 (MQ=255)
                                                                              gCATTTCAACGCCGAAT‑CGATGCGCCGGTTCGCGGACTTCTTTGGTATTGCGGTAGCCTTCCCCCACCTGACCAATCTTCTCCTGCGCGCTTTGTACATCC‑ATGCCCTGACCGAGCATCATGCCAAAGCGGCGGTTACGCGACTGGTGGTCGGTACAGGAAAGCACCAGATCGCCAAG‑CCCCGCCATGCCCATAAAGGTGGCAGGGTCGGCACCCAGCGCCGCACCAAGACGCGACATTTCagccagcc                                                                                                                                                                  <  2:931883/249‑1 (MQ=255)
                                                                                   ccAACGCCGAAG‑CGATGCGCCAGTTCGCGGACTTCTTTCGTATTGCGGTAGCCTTCCCCCCCCTGCCCAATCTTCTCCTGCGCGCTTTGTACATCC‑ATGCCCTGACCGAGCATCATGCCAAAACGGCGGTTACGCGACTGGTTGTCGGTACAGGTAAGCACCAGATCGCCAAG‑CCCCGCCATGCCCATAAAGGTGGCAGGGTc                                                                                                                                                                                                           <  1:270200/202‑1 (MQ=255)
                                                                                   ccAACGCCGAAG‑CGATGCGCCAGTTCGCGGACTTCTTTCGTATTGCGGTAGCCTTCCACCACCTGACCAATCTTCTCCTGCGCGCTTTGTACATCC‑ATGCCCTGACCGAGCATCATGCCAAAACGGCGGTTACGCGACTGGTTGTCGGTACAGGTAAGCACCAGATCGCCAAG‑CCCCGCCATGCCCATAAAGGTGGCAGGGTCGGCACCCAGCGCCGCACCAAGACGCGACATTTCAGCCAGCCCACgg                                                                                                                                                             <  1:1172228/248‑1 (MQ=255)
                                                                                             aagggctGCGCCAGTTCGGGGCCTTCTTTCGTTTTGGGGTAGCCTCCCACCCCCGGCCCAACCTTCTCCTGCCCGCTTTGTACATCC‑AGGCCCTGACCGAGAAGAATGCAAAACCGGCGGTGCCGCGATTGGTTGTCGGTACAGGTAAGCCCCAGATCGCCAAG‑CCCCGCCATGCCCATAAAGGTGGCAGGGTCGGCACCCAGCGCCGCACCAAGACGCGACATTTCAGCCAGCCCACGGGTGATCAgcg                                                                                                                                                   <  2:891748/244‑1 (MQ=255)
                                                                                                   tGCGCCAGTTCGCGGACTTCTTCCGTATTGCGGTAGCCTCCCCCCACCGGCCCAATCTCCCCCTGCGCGCTTTGTACATCC‑ATGCCCTGCCCGAGCATCATGCCAAAACGGCGGTTACGCGACTGGTTGTCGGTACAGGTAAGCCCCAGATCGCCAAG‑CCCCGCCATGCCCATAAAGGTGGCAGGGTCGGCACCCAGCGCCGCACCAAGACGCGACATTTCAGCCAGCCCACGGGTGATCAGCGCCGTAc                                                                                                                                             <  1:76544/250‑1 (MQ=255)
                                                                                                       ccAGTTCCCGGACTTCTTTCGTATTGCGGTGGCCTCCCCCCCCCTGCCCAACCTCCCCCGGCGCGCTTTGTACATCC‑ATGCCCTGACCGGGCATCATGCCAAACCGGCGGTTACGCGACTGGTTGTCGGTACAGGAAAGCACCAGACCGCCAAG‑CCCCGCCATGCCCATAAAGGTGGCAGGGTCGGCACCCAGCGCCGCACCAAGACGCGACATTTCAGCCAGCCCACGGGTGATCAGCGCCGTACgcgc                                                                                                                                         <  2:1193613/250‑1 (MQ=255)
                                                                                                          cgtCGCGGCCCTCCTTTGCAATGCGGTGACCCTCCCCCCCCCGACCCAACTTCCCCCGCCCCCTTTTTTCCTCCAATCCCCGGCCCAAGCACCATGCAAAACCGGCGGTTCCGCGCTTGTTGGTCGGTCAGGGAAACCCCCGGACCCCCAGC‑CCCCGCCATGCCCATAAAGGTGGCAGGGTCGGCACCCAGCGCCGCACCAAGACGCGACATTTCAGCCAGCCCACGGGTGATCAGCGCCGTACGCGCAt                                                                                                                                       <  2:257815/248‑1 (MQ=255)
                                                                                                                  aCTTCTTCCTTATTGCGGTCGCCTCCCCCCCCCTGCCCAATCTCCCCCTGCGCTCTTTGTACATCC‑ATGCCCTGACCGAGCATCATGCCAAAACGGCGGTTACGCGACGGGTGGTCGGTACAGGAAAGCACCAGATCGCCAAG‑CCCCGCCATGCCCATAAAGGTGGCAGGGTCGGCACCCAGCGCCGCACCAAGACGCGACATTTCAGCCAGCCCACGGGTGATCAGCGCCGTACGCGCATTCGCACCaa                                                                                                                              <  2:1224524/250‑1 (MQ=255)
                                                                                                                   cttcttTCGTATGGCGGTAGCCTTCACCCCCCTGACCAATCTTCTCCTGCGGGCTTTGTAAATCC‑ATGCCCTGACCGAGCACCAGGCAAAAACGGCGGTTACGCGACTGGTTGGCGGTACAGGTAAGCCCAAGATCGCCAAG‑CCCCGCCATGCCCATAAAGGTGGCAGGGTCGGCACCCAGCGCCGCACCAAGACGCGACATTTCAGCCAGCCCACGGGTGATCAGCGCCGTACGCGCATTCGCACCaaa                                                                                                                             <  2:900516/250‑1 (MQ=255)
                                                                                                                    ttcttTCGTATTGCGGTAGCCTTCCACCACCTGACCAATCTTCTCCTGCGCGCTTTGTACATCC‑ATGCCCTGACCGAGCATCATGCCAAAACGGCGGTTACGCGACTGGTTTTCGGGACAGGGAAGCACCACAACGCCAAG‑CCCCGCCATGCCCATAAAGGTGGCAGGGGCGGCCCCCAGCGCCGCACCCAAAACCCACCTTTCCGCCCGCCCCCGGGGGATCAGCGCCCGACGCGCACTCGCCCCcaaa                                                                                                                            >  2:923607/1‑250 (MQ=255)
                                                                                                                                  ggatgCCTCCCCCCCCCTGACCAATCTCCTCCTGCGCGCTTTTTACATCC‑ATGCCCTGACCGAGCATCAGGCCAAAACGGCGGTTACGCGACTGTTTGTCGGTACAGGTAAGCACCAGATCGCCAAG‑CCCCGCCATGCCCATAAAGGTGGCAGGGTCGGCACCCAGCGCCGCACCAAGACGCGACATTTCAGCCAGCCCACGGGTGATCAGCGCCGTACGCGCATTCGCACCAAAACCGATACCGTCGGa                                                                                                              <  2:106295/246‑1 (MQ=255)
                                                                                                                                        ctccccccaccTGACCAATCTCCCCCTGCGCGCTTTGTACACCC‑ATGCCCTGACCGAGCATCATGCCAAAACGGCGGTTACGCGACTGGTTGTCGGTACAGGTAAGCCCCAGACCGCCAAG‑CCCCGCCATGCCCATAAAGGTGGCAGGGTCGGCACCCAGCGCCGCACCAAGACGCGACATTTCAGCCAGCCCACGGGTGATCAGCGCCGTACGCGCATTCGCACCAAAACCGATACCGTCGGACATccc                                                                                                        <  2:616436/244‑1 (MQ=255)
                                                                                                                                          ccccccccccgACCACCCTTCCCCGGCGCGTTTGGTCCACCC‑CGCCCCTACCCGGGCCTCATGCCAAACCGGGGGTTACGCGACGGGTTGCGGGTACAGGTAAGCCCCAGACCGCCAAG‑CCCCGCCATGCCCATAAAGGTGGCAGGGTCGGCACCCAGCGCCGCACCAAGACGCGACATTTCAGCCAGCCCACGGGTGATCAGCGCCGTACGCGCATTCGCACCAAAACCGATACCGTCGGACATCCCCg                                                                                                      <  2:180739/240‑1 (MQ=255)
                                                                                                                                           ccaccaCATGGACATTCTTCTCCGGCGCGCTTTGTGATCCC‑AGGCCCGCACCGAGCATCAGGCCAAAACGGCGGTTCCGCAGCTGGTTGGGGGAAGGGGTAAGCACCAAGCCCCCAGC‑CCCCGCCATGCCCATAAAGGTGGCAGGGTCGGCACCCAGCGCCGCACCAAGACGCGACATTTCAGCCAGCCCACGGGTGATCAGCGCCGTACGCGCATTCGCACCAAAACCGATACCGTCGGACATCCCCGc                                                                                                     <  2:1138239/250‑1 (MQ=255)
                                                                                                                                             ccccccTGACCAACCTTCTCCTGCGCGCTTTGTACATCC‑ATGCCCTGACCGAGCATCATGCCAAAACGGCGGTTACGCGACTGGTTGTCGGTACAGGTAAGCACCAGACCGCCAAG‑CCCCGCCATGCCCATAAAGGTGGCAGGGTCGGCACCCAGCGCCGCACCAAGACGCGACATTTCAGCCAGCCCACGGGTGATCAGCGCCGTACGCGCATTCGCACCAAAACCGATACCGTCGGACATCCCCGCAc                                                                                                   <  1:277835/246‑1 (MQ=255)
                                                                                                                                             acccccTGACCAATCTTCTCCTGCGCGCTTTGTACATCC‑ATGCCCTGACCGAGCATCATGCCAAAACGGCGGTTACGCGACTGGTTGTCGGTACAGGTAACCACCAGACCGCCAAG‑CCCCGCCATGCCCATAAAGGTGGCAGGGTCGGCACCCAGCGCCGCACCAAGACGCGACATTTCAGCCAGCCCACGGGTGATCAGCGCCGTACGCGCATTCGCACCAAAACCGATACCGTCGGACATCCCCGCAc                                                                                                   <  1:1020485/250‑1 (MQ=255)
                                                                                                                                                cccTGACCAATCTTCCCCTGCGCGCTTTGTACATCC‑ATGCCCTGACCGAGCATCAGGCCAAAACGGCGGTTACGCGACTGGTTGTCGGTACAGGTAAGCACCAGACCGCCAAG‑CCCCGCCATGCCCATAAAGGTGGCAGGGTCGGCACCCAGCGCCGCACCAAGACGCGACATTTCAGCCAGCCCACGGGTGATCAGCGCCGTACGCGCATTCGCACCAAAACCGATACCGTCGGACATCCCCGCACCaa                                                                                                <  1:686473/249‑1 (MQ=255)
                                                                                                                                                        atccttccCCTGCGCTCTTTGTCCACCC‑CTCCCCGGCCCGACCAGCATCCCGAACCGGCGGTTACGCGAGTGGTTGTCGGTGCGGGTAAGCCCCGGACCGCCACG‑CCCCGCCATGCCCATAAAGGTGGCAGGGTCGGCACCCAGCGCCGCACCAAGACGCGACATTTCAGCCAGCCCACGGGTGATCAGCGCCGTACGCGCATTCGCACCAAAACCGATACCGTCGGACATCCCCGCACCAATGGCAATa                                                                                        <  2:948830/247‑1 (MQ=255)
                                                                                                                                                        aaTCTTCTCCTGCGCGCTTTGTACATCC‑AGGCCCTGACCGAGCATCATGCCAAAACGGCGGTTACGCGACTGGTTGTCGGTACAGGTAAGCACCAGATCGCCAAG‑CCCCGCCATGCCCATAAAGGTGGCAGGGTCGGCACCCAGCGCCGCACCAAGACGCGACATTTCAGCCAGCCCACGGGTGATCAGCGCCGTACGCGCATTCGCACCAAAACCGATACCGTCGGACATCCCCGCACCAATGGCAATa                                                                                        <  1:449884/250‑1 (MQ=255)
                                                                                                                                                           cttccgcTGCGCGCTTTGTCCCCCC‑GTGCCCTGACCGCGCATCCTCCAAAACCGGCGGTTCCGCAAGTGGTGGTGGTTAGGGGAAAGCACCAGATCGCAACG‑CCCCGCCATGCCCATAAAGGTGGCAGGGTCGGCACCCAGCGCCGCACCAAGACGCGACATTTCAGCCAGCCCACGGGTGATCAGCGCCGTACGCGCATTCGCACCAAAACCGATACCGTCGGACATCCCCGCACCAATGGCAATaa                                                                                       <  2:794100/242‑1 (MQ=255)
                                                                                                                                                                    cgctcttgttACACCC‑ACCCCCTGCCCGAGCACCACGCAAAACCGGCGGTGCCGCGACTGTGTGCCGATACAGTGAACCCCCAGACCCCGACG‑CCCCGCCATGCCCATAAAGGTGGCAGGGTCGGCACCCAGCGCCGCACCAAGACGCGACATTTCAGCCAGCCCACGGGTGATCAGCGCCGTACGCGCATTCGCACCAAAACCGATACCGTCGGACATCCCCGCACCAATGGCAATAACGTTTTTCAcc                                                                            <  2:952495/241‑1 (MQ=255)
                                                                                                                                                                    cgcgcTTTGTACATCC‑ATGCCCTGACCGAGCATCATGCCAAAACGGCGGTTACGCGACTGGTTGTCGGTACAGGTAAGCACCAGATCGCCAAG‑CCCCGCCATGCCCATAAAGGTGGCAGGGTCGGCACCCAGCGCCGCACCAAGACGCGACATTTCAGCCAGCCCACGGGTGATCAGCGCCGTACGCGCATTCGCACCAAAACCGATACCGTCGGACATCCCCGCACCAATGGCAATAACGTTTTTCa                                                                              <  1:902997/248‑1 (MQ=255)
                                                                                                                                                                    cgcgcTTTGTACATCC‑ATGCCCTGACCGAGCATCATGCCAAAACGGCGGTTACGCGACTGGTTGTCGGTACAGGTAAGCACCAGATCGCCAAG‑CCCCGCCATGCCCATAAAGGTGGCAGGGTCGGCACCCAGCGCCGCACCAAGACGCGACATTTCAGCCAGCCCACGGGTGATCAGCGCCGTACGCGCATTCGCACCAAAACCGATACCGTCGGACATCCCCGCACCAATGGCAATAACGTTTTTCAc                                                                             <  1:1230509/249‑1 (MQ=255)
                                                                                                                                                                       gcTTTGTCCCTCC‑ATCCCCGGACCGGGCATCAGGCCAAAACGGCGGTTCCGCGACTGGTTGCCGGTACAGGTAAGCCCCAGACCGCAAGG‑CCCCGCCATGCCCATAAAGGTGGCAGGGTCGGCACCCAGCGCCGCACCAAGACGCGACATTTCAGCCAGCCCACGGGTGATCAGCGCCGTACGCGCATTCGCACCAAAACCGATACCGTCGGACATCCCCGCACCAATGGCAATAACGTTTTTCACcgcg                                                                         <  2:1060892/250‑1 (MQ=255)
                                                                                                                                                                                          ctgcccggccatcatGCCAAACCGGCGTTTCCGCGACTGGTTGTCGGTACAGGTAAGCCCCAGATCGCCAAG‑CCCCGCCATGCCCATAAAGGTGGCAGGGTCGGCACCCAGCGCCGCACCAAGACGCGACATTTCAGCCAGCCCACGGGTGATCAGCGCCGTACGCGCATTCGCACCAAAACCGATACCGTCGGACATCCCCGCACCAATGGCAATAACGTTTTTCACCGCGCCGCCAAGCTGCACGCCa                                                       <  1:390638/241‑1 (MQ=255)
                                                                                                                                                                                               cGAGCATCATGCCAAACCGGCGGTTACGCGACTGGTTGTCGGTACAGGTAAGCACCAGATCGCCAAG‑CCCCGCCATGCCCATAAAGGTGGCAGGGTCGGCACCCAGCGCCGCACCAAGACGCGACATTTCAGCCAGCCCACGGGTGATCAGCGCCGTACGCGCATTCGCACCAAAACCGATACCGTCGGACATCCCCGCACCAATGGCAATAACGTTTTTCACCGCGCCGCCAAGCTGCACGCCAATGaa                                                  <  1:564297/250‑1 (MQ=255)
                                                                                                                                                                                                gAGCATCAGGCCAAAACGGCGGTTACGCGACTGGTGGTCGGTACAGGTAAGCACCAGATCGCCAAG‑CCCCGCCATGCCCATAAAGGTGGCAGGGTCGGCACCCAGCGCCGCACCAAGACGCGACATTTCAGCCAGCCCACGGGTGATCAGCGCCGTACGCGCATTCGCACCAAAACCGATACCGTCGGACATCCCCGCACCAATGGCAATAACGTTTTTCACCGCGCCGCCAAGCTGCACGCCAATGaaa                                                 <  1:130761/250‑1 (MQ=255)
                                                                                                                                                                                                   catcatGCCAAAACGGCGGTTACGCGACTGGTTGTCGGGACAGGTAGGCACCAGTTCGCCAAG‑CCCCGCCATGCCCATAAAGGTGGCAGGGTCGGCACCCAGCGCCGCACCAAGACGCGACATTTCAGCCAGCCCACGGGTGATCAGCGCCGTACGCGCATTCGCACCAAAACCGATACCGTCGGACATCCCCGCACCAATGGCAATAACGTTTTTCACCGCGCCGCCAAGCTGCACGCCAATGAAATcc                                              <  1:1099886/250‑1 (MQ=255)
                                                                                                                                                                                                     acaggCCAAACGGGCGGTTACGCGATTGGTGGTGGGTACAGATAAGCGCCAGACCGCCAAC‑CCCCGCCATGCCCATAAAGGTGGCAGGGTCGGCACCCAGCGCCGCACCAAGACGCGACATTTCAGCCAGCCCACGGGTGATCAGCGCCGTACGCGCATTCGCACCAAAACCGATACCGTCGGACATCCCCGCACCAATGGCAATAACGTTTTTCACCGCGCCGCCAAGCTGCACGCCAATGAAATCCgg                                            <  2:1017508/246‑1 (MQ=255)
                                                                                                                                                                                                             aaccggtggTGACGCGACTGGTTGTCGGTACAGGTAAGCCCCGAATCGCCAAG‑CCCCGCCATGCCCATAAAGGTGGCAGGGTCGGCACCCAGCGCCGCACCAAGACGCGACATTTCAGCCAGCCCACGGGTGATCAGCGCCGTACGCGCATTCGCACCAAAACCGATACCGTCGGACATCCCCGCACCAATGGCAATAACGTTTTTCACCGCGCCGCCAAGCTGCACGCCAATGAAATCCGGATTGCTGt                                    <  1:518310/247‑1 (MQ=255)
                                                                                                                                                                                                              acgggcgtgtACGCGCCGTGTTGCGGGTACAGGAAGCCACCGGATCGCCACG‑CCCCGCCATGCCCATAAAGGTGGCAGGGTCGGCACCCAGCGCCGCACCAAGACGCGACATTTCAGCCAGCCCACGGGTGATCAGCGCCGTACGCGCATTCGCACCAAAACCGATACCGTCGGACATCCCCGCACCAATGGCAATAACGTTTTTCACCGCGCCGCCAAGCTGCACGCCAATGAAATCCGGATTGCTGTa                                   <  2:1154492/241‑1 (MQ=255)
                                                                                                                                                                                                              aaCGGCGGTTACGCGGCTGGTTGGCGGGACAGGGACGCACCAGACCCCCAAC‑CCCCGCTATGCCCATAAAGGTGGCAGGGTCGGCACCCAGCGCCGCACCAAGACGCGACATTTCAGCCAGCCCACGGGTGATCAGCGCCGTACGCGCATTCGCACCAAAACCGATACCGTCGGACATCCCCGCACCAATGGCAATAACGTTTTTCACCGCGCCGCCAAGCTGCACGCCAATGAAATCCGGATTGCTGTa                                   <  2:83273/250‑1 (MQ=255)
                                                                                                                                                                                                              aaCGCCGGTTCCACAACTGGTCAGCGGTACAGAAAACCACCACACCCCCACC‑CCCCGCCATGCCCATAAAGGTGGCAGGGTCGGCACCCAGCGCCGCACCAAGACGCGACATTTCAGCCAGCCCACGGGTGATCAGCGCCGTACGCGCATTCGCACCAAAACCGATACCGTCGGACATCCCCGCACCAATGGCAATAACGTTTTTCACCGCGCCGCCAAGCTGCACGCCAATGAAATCCGGATTGCTGTa                                   <  2:549545/250‑1 (MQ=255)
                                                                                                                                                                                                                 ggcggTTCCGCGACGGGTGGTCGGTACAGGTAAGCCCCAGAGCGCCAAG‑CCCCGCCATGCCCATAAAGGTGGCAGGGTCGGCACCCAGCGCCGCACCAAGACGCGACATTTCAGCCAGCCCACGGGTGATCAGCGCCGTACGCGCATTCGCACCAAAACCGATACCGTCGGACATCCCCGCACCAATGGCAATAACGTTTTTCACCGCGCCGCCAAGCTGCACGCCAATGAAATCCGGATTGCTGTAAAc                                <  1:1179646/250‑1 (MQ=255)
                                                                                                                                                                                                                  gcggTTACGAGCCTGGTTGTCGGTACAGGTAAGCCCCAGATCGCCAAG‑CCCCGCCATGCCCATAAAGGTGGCAGGGTCGGCACCCAGCGCCGCACCAAGACGCGACATTTCAGCCAGCCCACGGGTGATCAGCGCCGTACGCGCATTCGCACCAAAACCGATACCGTCGGACATCCCCGCACCAATGGCAATAACGTTTTTCACCGCGCCGCCAAGCTGCACGCCAATGAAATCCGGATTGCTGTAAAcg                               <  1:982680/250‑1 (MQ=255)
                                                                                                                                                                                                                   gggTTACGCGACGGGTTGTCGGTACAGGAAAGCACCAGATCGCCAAG‑CCCCGCCATGCCCATAAAGGTGGCAGGGTCGGCACCCAGCGCCGCACCAAGACGCGACATTTCAGCCAGCCCACGGGTGATCAGCGCCGTACGCGCATTCGCACCAAAACCGATACCGTCGGACATCCCCGCACCAATGGCAATAACGTTTTTCACCGCGCCGCCAAGCTGCACGCCAATGAAATCCGGATTGCTGTAAAcgc                              <  1:1047774/249‑1 (MQ=255)
                                                                                                                                                                                                                         cgcgACTGTTTGTCGGTACAGGTAAGCCCCAGATCGCCAAG‑CCCCGCCATGCCCATAAAGGTGGCAGGGTCGGCACCCAGCGCCGCACCAAGACGCGACATTTCAGCCAGCCCACGGGTGATCAGCGCCGTACGCGCATTCGCACCAAAACCGATACCGTCGGACATCCCCGCACCAATGGCAATAACGTTTTTCACCGCGCCGCCAAGCTGCACGCCAATGAAATCCGGATTGCTGTAAACGCGGaaa                         <  1:63837/249‑1 (MQ=255)
                                                                                                                                                                                                                          gctccgggTTGTCGGTACGGGTACGCCCCAGACCCCCAAC‑CCCCGCCATGCCCATAAAGGTGGCAGGGTCGGCACCCAGCGCCGCACCAAGACGCGACATTTCAGCCAGCCCACGGGTGATCAGCGCCGTACGCGCATTCGCACCAAAACCGATACCGTCGGACATCCCCGCACCAATGGCAATAACGTTTTTCACCGCGCCGCCAAGCTGCACGCCAATGAAATCCGGATTGCTGTAAACGCGGAAACt                       <  2:343665/244‑1 (MQ=255)
                                                                                                                                                                                                                             acgtgTTGTCGGTACAGGAAAGCACCAGATCGCCAAG‑CCCCGCCATGCCCATAAAGGTGGCAGGGTCGGCACCCAGCGCCGCACCAAGACGCGACATTTCAGCCAGCCCACGGGTGATCAGCGCCGTACGCGCATTCGCACCAAAACCGATACCGTCGGACATCCCCGCACCAATGGCAATAACGTTTTTCACCGCGCCGCCAAGCTGCACGCCAATGAAATCCGGATTGCTGTAAACGCGGAAACtttt                    <  1:344330/246‑1 (MQ=255)
                                                                                                                                                                                                                                       ggTACAGGTAAGCACCAGATCGCCAAG‑CCCCGCCATGCCCATAAAGGTGGCAGGGTCGGCACCCAGCGCCGCACCAAGACGCGACATTTCAGCCAGCCCACGGGTGATCAGCGCCGTACGCGCATTCGCACCAAAACCGATACCGTCGGACATCCCCGCACCAATGGCAATAACGTTTTTCACCGCGCCGCCAAGCTGCACGCCAATGAAATCCGGATTGCTGTAAACGCGGAAACTTTTGCCGCAGTg           >  2:148734/1‑249 (MQ=255)
                                                                                                                                                                                                                                         aaCAGGTAAGCCCAAGACCCCCAGG‑CCCCGCCATGCCCATAAAGGTGGCAGGGTCGGCACCCAGCGCCGCACCAAGACGCGACATTTCAGCCAGCCCACGGGTGATCAGCGCCGTACGCGCATTCGCACCAAAACCGATACCGTCGGACATCCCCGCACCAATGGCAATAACGTTTTTCACCGCGCCGCCAAGCTGCACGCCAATGAAATCCGGATTGCTGTAAACGCGGAAACTTTTGCCGCAGTgcag        <  1:858608/249‑1 (MQ=255)
                                                                                                                                                                                                                                            aGGTAAGCACCAGATCGCCAAG‑CCCCGCCATGCCCATAAAGGTGGCAGGGTCGGCACCCAGCGCCGCACCAAGACGCGACATTTCAGCCAGCCCACGGGTGATCAGCGCCGTACGCGCATTCGCACCAAAACCGATACCGTCGGACATCCCCGCACCAATGGCAATAACGTTTTTCACCGCGCCGCCAAGCTGCACGCCAATGAAATCCGGATTGCTGTAAACGCGGAAACTTTTGCCGCAGTGcagcag     >  1:1097318/1‑250 (MQ=255)
                                                                                                                                                                                                                                               tAAGCACCAGATCGCCAAG‑CCCCGCCATGCCCATAAAGGTGGCAGGGTCGGCACCCAGCGCCGCACCAAGACGCGACATTTCAGCCAGCCCACGGGTGATCAGCGCCGTACGCGCATTCGCACCAAAACCGATACCGTCGGACATCCCCGCACCAATGGCAATAACGTTTTTCACCGCGCCGCCAAGCTGCACGCCAATGAAATCCGGATTGCTGTAAACGCGGAAACTTTTGCCGCAGTGCAGCAgctg  >  1:217185/1‑250 (MQ=255)
                                                                                                                                                                                                                                                    |                                                                                                                                                                                                                                                     
CACGACCTAGTAAAGTCAATGCTGCCTCGCGCGCGTTTTTTCCGCAATATAATACTTGATAAATTTCCTCGGTTATTGGCATTTCAACGCCGAAG‑CGATGCGCCAGTTCGCGGACTTCTTTCGTATTGCGGTAGCCTTCCACCACCTGACCAATCTTCTCCTGCGCGCTTTGTACATCC‑ATGCCCTGACCGAGCATCATGCCAAAACGGCGGTTACGCGACTGGTTGTCGGTACAGGTAAGCACCAGATCGCCAAG‑CCCCGCCATGCCCATAAAGGTGGCAGGGTCGGCACCCAGCGCCGCACCAAGACGCGACATTTCAGCCAGCCCACGGGTGATCAGCGCCGTACGCGCATTCGCACCAAAACCGATACCGTCGGACATCCCCGCACCAATGGCAATAACGTTTTTCACCGCGCCGCCAAGCTGCACGCCAATGAAATCCGGATTGCTGTAAACGCGGAAACTTTTGCCGCAGTGCAGCAGCTG  >  NZ_CP009273/3776031‑3776517

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 26 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑