| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NZ_CP009273 | 4,036,390 | 0 | A | G | 40.8% | 66.7 / 16.9 | 49 | N206D (AAT→GAT) | srkA | stress response kinase SrkA |
| Reads supporting (aligned to +/- strand): ref base A (20/9); new base G (20/0); total (40/9) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 6.73e-03 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
| Rejected as consensus: Frequency below/above cutoff threshold. | |||||||||||
CGGTTGGGCGTTATTTAGGGCGTATGCACCAGACGGGGCGCAAACAGCTTTTTATCCATCGCCCGACCATCGGTTTGAACGAATATCTCATTGAGCCACGCAAGCTGTTTGAGGACGCTACACTGATACCTTCCGGGTTGAAAGCGGCATTCCTGAAAGCGACAGATGAGCTGATTGCCGCCGTTACAGCACACTGGCGGGAAGATTTCACCGTTCTGCGGCTA‑CATGGAGACTGCCACGCCGGGAATATTCTCTGGCGCGATGGTCCAATGTTTGTTGATCTGGATGATGCAC‑GTAATG‑GTCCAG‑CCGTTCAGGATTTGTGGATGTTGCTCAATGGCGATAAAGCCGAGCAGC‑GGATGCAACTGGAAACTATTATTGAAGCTTATGAAGAATTTAGCGAGTTCGACACCGCTGAAATCGGACTGATTGAACCTTTACGCGCCATGCGTTTGGTTTATTATCTTGCCTGGCTAATGCGGCGTTGGGCTGATCCCG > NZ_CP009273/4036145‑4036639 | cGGTTGGGCGTTATTTAGGGCGTATGCACCAGACGGGGCGCAAACAGCTTTTTATCCATCGCCCGACCATCGGTTTGAACGAATATCTCATTGAGCCACGCAAGCTGTTTGAGGACGCTACACTGATACCTTCCGGGTTGAAAGCGGCATTCCTGAAAGCGACAGATGAGCTGATTGCCGCCGTTACAGCACACTGGCGGGAAGAATTTACCGTTCTGCGGGTA‑CCTGGGGGACGCCACGCCGGGGatat > 1:151821/1‑250 (MQ=255) ggTTGGGCGTTATTTAGGGCGTATGCACCAGACGGGGCGCAAACAGCTTTTTATCCATCGCCCGACCATCGGTTTGAACGAATATCTCATTGAGCCACGCAAGCTGTTTGAGGACGCTACACTGATACCTTCCGGGTTGAAAGCGGCATTCCTGAAAGCGACAGATGAGCTGATTGCCGCCGTTACAGCACACTGGCGGGAAGAATTTACCGTTCTGCGGGCA‑CATGGAGACTGTCACGCCGGGGATAtt > 1:662192/1‑250 (MQ=255) gggCGTATGCACCAGACGGGGCGCAAACAGCTTTTTATCCATCGCCCGACCATCGGTTTGAACGAATATCTCATTGAGCCACGCAAGCTGTTTGAGGACGCTACACTGATACCTTCCGGGTTGAAAGCGGCATTCCTGAAAGCGACAGATGAGCTGATTGCCGCCGTTACAGCACACTGGCGGGAAGATTTCACCGTTCTGCGGCTA‑CATGGAGACTGCCACGCCGGGAATATTCTCTGGCGCGATGGTc < 1:346092/250‑1 (MQ=255) cGTATGCACCAGACGGGGCGCAAACAGCTTTTTATCCATCGCCCGACCATCGGTTTGAACGAATATCTCATTGAGCCACGCAAGCTGTTTGAGGACGCTACACTGATACCTTCCGGGTTGAAAGCGGCATTCCTGAAAGCGACAGATGAGCTGATTGCCGCCGTTACAGCACACTGGCGGGGAGGGTTCACCGCTCTTCGGCGA‑AACGGCGACGGGCACGCCCGGGGTATTCTCTCGcccggagggcc > 2:530933/1‑241 (MQ=255) cACCAGACGGGGCGCAAACAGCTTTTTATCCATCGCCCGACCATCGGTTTGAACGAATATCTCATTGAGCCACGCAAGCTGTTTGAGGACGCTACACTGATACCTTCCGGGTTGAAAGCGGCATTCCTGAAAGCGACAGATGAGCTGATTGCCGCCGTTACAGCACACTGGCGGGAAGATTTCACCGTTCTGCGGGTA‑CATGGAGACTGCCACGCCGGGGATATTTTCTGGCGCGATGGTCCCAtgtttg > 1:646328/1‑250 (MQ=255) ccAGACGGGGCGCAAACAGCTTTTTATCCATCGCCCGACCATCGGTTTGAACGAATATCTCATTGAGCCACGCAAGCTGTTTGAGGACGCTACACTGATACCTTCCGGGTTGAAAGCGGCATTCCTGAAAGCGACAGATGAGCTGATTGCCGCCGTTACAGCACACTGGCGGCGAAATTTCACCGTTCTTCGGGCA‑CACGGGGACTGCCCCGCCCGGAATATTCTCTTTGGCGGTGGTCCCAtgtttgtt > 2:1167780/1‑250 (MQ=255) aGACGGGGCGCAAACAGCTTTTTATCCATCGCCCGACCATCGGTTTGAACGAATATCTCATTGAGCCACGCAAGCTGTTTGAGGACGCTACACTGATACCTTCCGGGTTGAAAGCGGCATTCCTGAAAGCGACAGATGAGCTGATTGCCGCCGTTACAGCACACTGGCGGGGCAATTTCACCCTTCTGCGGCCC‑CATGTAGTCTCCCCAGCAGGGAGTATACTCTTCAGCGCTGGGCCACtatttgtttt > 2:1016014/1‑248 (MQ=255) aaCAGCTTTTTATCCATCGCCCGACCATCGGTTTGAACGAATATCTCATTGAGCCACGCAAGCTGTTTGAGGACGCTACACTGATACCTTCCGGGTTGAAAGCGGCATTCCTGAAAGCGACAGATGAGCTGATTGCCGCCGTTACAGCACACTGGCGGGGAGATTTTACCGCTCTGCGGCTC‑CATGGGGACTGCCACGCCGGGAATATTTTCTGGGCCGAGGGTCCAATGGTTGTTGATCTGGgttatg > 2:1018947/1‑249 (MQ=255) aGCTTTTTATCCATCGCCCGACCATCGGTTTGAACGAATATCTCATTGAGCCACGCAAGCTGTTTGAGGACGCTACACTGATACCTTCCGGGTTGAAAGCGGCATTCCTGAAAGCGACAGATGAGCTGATTGCCGCCGTTACAGCACACTGGCGGGGAGGTTTTACCCTTCTTCGGCCA‑CCTGGGGAACGCCCCGCCCGGGATATTTTCTGGCGCGGTGGGCCAATTTTTTTTTTTCTGggtggttcccg > 2:520322/1‑243 (MQ=255) tCCATCGCCCGACCATCGGTTTGAACGAATATCTCATTGAGCCACGCAAGCTGTTTGAGGACGCTACACTGATACCTTCCGGGTTGAAAGCGGCATTCCTGAAAGCGACAGATGAGCTGATTGCCGCCGTTACAGCACACTGGCGGGAAGATTTCACCGTTCTGCGGCTA‑CATGGAGACTGCCACGCCGGGGATATTTTCTTGCGCGATGGTCCCATGTTTGTTGATCTGGATGATGCAC‑GTAATG‑GTcc > 1:1033147/1‑250 (MQ=255) cATCGGTTTGAACGAATATCTCATTGAGCCACGCAAGCTGTTTGAGGACGCTACACTGATCCCTTCCGGGTTGAAAGCGGCATTCCTGAAAGCGACAGATGAGCTGTTTGCCGCCGTTACAGCACACTGGCGGGAAGATTTCACCGTTCTGCGGCTA‑CATGGAGACTGCCACGCCGGGAATATTCTCTGGCGCGATGGTCCAATGTTTGTTGATCTGGATGATGCAC‑GTAATG‑GTCCAG‑CCGTTCAGGAt < 2:719793/250‑1 (MQ=255) cATCGGTTTGAACGAATATCTCATTGAGCCACGCAAGCTGTTTGAGGACGCTACACTGATACCTTCCGGGTTGAAAGCGGCATTCCTGAAAGCGACAGATGAGCTGATTGCCGCCGTTACAGCACACTGGCGGGAAGATTTCACCGTTCTGCGGCTA‑CATGGAGACTGCCACGCCGGGGATATTTTCTGGCGCGGTGGGCCCATGTTTGTTGGTCTGGGTGATGGAC‑GGAATG‑GTCCAG‑CCGGTCAgggt > 1:1140138/1‑248 (MQ=255) atCTCATTGAGCCACGCAAGCTGTTTGAGGACGCTACACTGATACCTTCCGGGTTGAAAGCGGCATTCCTGAAAGCGACAGATGAGCTGATTGCCGCCGTTACAGCACACTGGCGGGAAGATTTCACCCTTCTTCGGCTACCATGG‑GACTGCCCCGCCGGGGGTATTTTCTTGCGCGCTGGGCCATTGTTTTTTGATCTTGGTGCTTGTC‑GTAAAG‑GTCCAGACGGTCCGGGGTTTTTGGttgttgtatt > 2:326640/1‑246 (MQ=255) ctcATTGAGCCACGCAAGCTGTTTGAGGACGCTACACTGATACCTTCCGGGTTGAAAGCGGCATTCCTGAAAGCGACAGATGAGCTGATTGCCGCCGTTACAGCACACTGGCGGGAAGAATTTACCGGTCTGCGGGCA‑CCTGGGGAACGCCCCGCCGGGGATATTCTCTGGCGCGGTGGTCCCATGTTTGTTGATCTGGGTGGATCACGGCAATG‑GTCAGC‑CCGTTAGGGTTTTGTGGTGGTTgtcca > 2:551982/1‑244 (MQ=255) aTTGAGCCACGCAAGCTGTTTGAGGACGCTACACTGATACCTTCCGGGTTGAAAGCGGCATTCCTGAAAGCGACAGATGAGCTGATTGCCGCCGTTACAGCACACTGGCGGGAAGATTTTACCGTTCTGCGGCTA‑CATGGAGACTGCCCCGCCGGGGATATTCTCTGGCGCGATGGGCCAATGTTTTTTTGTCTGGATGATGCAC‑GTAATG‑GTCCCG‑CCGTTCAGGGTTTGTGGGTGTTGCTCAAAGGc > 1:582430/1‑249 (MQ=255) ttGAGCCACGCAAGCTGTTTGAGGACGCTACACTGATACCTTCCGGGTTGAAAGCGGCATTCCTGAAAGCGACAGATGAGCTGATTGCCGCCGTTACAGCACACTGGCGGGAAAATTTTCCCCTTCTCCCGCTA‑CACGGGGCACGCCACCTCGGGGATATTCTCTTGCTCTGCGGTCCCATGTTTTTTGAAGCTGAGTATGCCA‑CCAATG‑GCATCG‑CGGTTCAGGAGTTTTGGGTGTTGCTCAACGGCg > 2:15714/1‑249 (MQ=255) aCGCAAGCTGTTTGAGGACGCTACACTGATACCTTCCGGGTTGAAAGCGGCATTCCTGAAAGCGACAGATGAGCTGATTGCCGCCGTTACAGCACACTGGCGGGAAGATTTTACCGTTCTGCGGCTA‑CCTGGAGACTGCCACGCCGGGGATATTTTCTGGCGCGCTGGTGCGATGTTTGTTGTTTTGGTTGGTGCAC‑GGTATGTGTCC‑G‑CCGGTCAGGAGTTGTGGGTGGTTCTCAAttgggtgaaagat > 2:195834/1‑238 (MQ=255) gCAAGCTGTTTGAGGACGCTACACTGATACCTTCCGGGTTGAAAGCGGCATTCCTGAAAGCGACAGATGAGCTGATTGCCGCCGTTACAGCACACTGGCGGGAAGAATTTACCGGTTTGTGGGTC‑CACGGAGACTGTCCCGCCCGGGATATTCTCTGTCGGGGTGGTCCAATTTTTTTTTGTCTGGATGGTGGAC‑GGAATT‑GTCCAG‑CCGTTCCGGGTTTGTGGTTGTTTGTCAATGGCGATTAAGACgg > 2:184088/1‑249 (MQ=255) aGGACGCTACACTGATACCTTCCGGGTTGAAAGCGGCATTCCTGAAAGCGACAGATGAGCTGATTGCCGCCGTTACAGCACACTGGCGGGAAGATTTCACCGTTCTGCGGCTA‑CATGGAGACTGCCACGCCGGGAATATTCTCTGGCGCGATGGTCCAATGTTTGTTGATCTGGATGATGCAC‑GTAATG‑GTCCAG‑CCGTTCAGGATTTGTGGATGTTGCTCAATGGCGATAAAGCCGAGCAGC‑GGATGc < 1:263598/249‑1 (MQ=255) cGCTACACTGATACCTTCCGGGTTGAAAGCGGCATTCCTGAAAGCGACAGATGAGCTGATTGCCGCCGTTACAGCACACTGGCGGGAAGATTTTACCGTTCTGCGGCTA‑CATGGAGACTGCCACGCCGGGGATATTTTCTGGCGCGGTGGGCCCATGTTTGTTGGTCTGGGTGATGCAC‑GTAATG‑GTCCAG‑CCGGTCCGGATTTGTGGGTGTTGCTCAATGGGGGTAAAACCGGGCAGC‑GGaatgaattg > 2:406600/1‑242 (MQ=255) tGATACCTTCCGGGTTGAAAGCGGCATTCCTGAAAGCGACAGATGAGCTGATTGCCGCCGTTACAGCACACTGGCGGGAAGATTTTACCGCTCTGCGGCTA‑CATGGAGACTGCCACGCCGGGGATATTCTCTGGCGCGATGGTCCAATGTTTGTTGATCTGGATGATGCAC‑GTAATG‑GTCCAG‑CCGTTCAGGATTTGTGGATGTTGCTCAATGGCGGTAAAGCCGGGCAGC‑GGATGCCACTGGGAACtat > 1:387236/1‑250 (MQ=255) aaGCGGCATTCCTGAAAGCGACAGATGAGCTGATTGCCGCCGTTACAGCACACTGGCGGGAAGATTTCACCGCTCTGCGGCTA‑CACGGGGACTGCCCCGCCGGGGAAATTTTCTGGCGCGGGGGTGCCATGTTTGTTGGTCTGGGTGTTGCAC‑GTAATG‑GTGCCG‑CCGTTCAGGCTTTGTGGGTGTTTCTCAATTGCGATAAAACCGAGCAGA‑GGGTGCAACTGGAAACTCTTTTTGAAACTTTTggaa > 2:851390/1‑246 (MQ=255) aTTCCTGAAAGCGACAGATGAGCTGATTGCCGCCGTTACAGCACACTGGCGGGAAGATTTTACCGTTCTGCGGCTA‑CATGGAGACTGCCACGCCGGGGATATTCTCTGGCGCGGTGGTCCAATGTTTTTTGATCTGGATGATGCAC‑GGAATG‑GTCCAG‑CCGTTCAGGATTTGTGGGTGTTTCTCAATGGCGATTAAGCCGCGCCGC‑AGATGGAACTGGAAACTATTTTTTTAGCTTATGAAGAAATTTGc > 1:372099/1‑250 (MQ=255) aaGCGACAGATGAGCTGATTGCCGCCGTTACAGCACACTGGCGGGAAGATTTTACCGTTTTGCGGCTA‑CACGGAGACTGCCACGCCCGGGATATTCTCTTGCGCGGTGGGTCAATGTTTTTTGATCTGGGTGATGCAC‑GTAATG‑GGCCCG‑CCGCGTAGGATTTGTGGTGGTTGTTCAATGGCGGTAAAGACGGGGCGC‑GGGGGCAACTGGGAAACATTATTTGAGATTTTGAAAAATTTAGAGAGTGCGa > 2:1017685/1‑250 (MQ=255) gACAGATGAGCTGATTGCCGCCGTTACAGCACACTGGCGGGGAGATTTCACCGTTTTTCGGCTA‑CATGGGGACTGCCACCCCGGGGAAATTTTTTTGCGCGGTGGTCCAATGTTTTTTGGTCTTGGTGATTCAC‑GTAATG‑GTCCAG‑CCGGTCAGGGTTTTTGGGTTTTGTTCAATTGGGTTAAAACCCAGCCGCGGGGTGC‑ACTGGGAAATATTATTTAAGATTTTTAAGAAATTTGCGGGtttgtgaac > 2:833084/1‑243 (MQ=255) aGATGAGCTGATTGCCGCCGTTACAGCACACTGGCGGGAAGATTTCACCGTTCTGCGGCTA‑CATGGAGACTGCCACGCCGGGAATATTCTCTGGCGCGATGGTCCAATGTTTGTTGATCTGGATGATGCAC‑GTAATG‑GTCCAG‑CCGTTCAGGATTTGTGGATGTTGCTCAATGGCGATAAAGCCGAGCAGC‑GGATGCAACTGGAAACTATTATTGAAGCTTATGAAGAATTTAGCGAGTTCGACACCGCt < 2:469802/250‑1 (MQ=255) aTGAGCTAATTGCCGCGGTTACAGCACACTGGCGGGAAGATTTCACCGTTCTGCGGCTA‑CATGGAGACTGCCACGCCGGGAATATTCTCTGGCGCGATGGTCCAATGTTTGTTGATCTGGATGATGCAC‑GTAATG‑GTCCAG‑CCGTTCAGGATTTGTGGATGTTGCTCAATGGCGATAAAGCCGAGCAGC‑GGATGCAACTGGAAACTATTATTGAAGCTTATGAAGAATTTAGCGAGTTCGACACCGCTGa < 2:132686/250‑1 (MQ=255) gccgTTAAAGCACACTGGCGGGAAGATTTCACCGTTCTGCGGCTA‑CATGGAGACTGCCACGCCGGGAATATTCTCTGGCGCGATGGTCCAATGTTTGTTGATCTGGATGATGCAC‑GTAATG‑GTCCAG‑ACGTTCAGGATTTGTGGATGTTGCTCAATGGCGATAAAGCCGAGCAGC‑GGATGCAACTGGAAACTATTATTGAAGCTTATGAAGAATTTAGCGAGTTCGACACCGCTGAAATCGGACTGATTg < 2:1090449/250‑1 (MQ=255) tACAGCACACTGGCGGGAAGATTTCACCGTTCTGCGGCTA‑CATGGAGACTGCCACGCCGGGGATATTCTCTGGCGCGATGGTCCAATGTTTGTTTATCTGGATGATGCAC‑GTAATG‑GTCCAG‑CCGTTCAGGATTTGTGGATGTTGCTCAATGGCGATAAAGCCGAGCAGC‑GGATGCAACTGGAAAATATTATTTAAGCTTATGAAGAATTTAGCGAGTTTGACACCGCTGAAATCGGACTGATTGAAccc > 1:1191651/1‑249 (MQ=255) acacTGGCGGGAAGATTTCACCGTTCTGCGGCTA‑CATGGAGACTGCCACGCCGGGAATATTCTCTGGCGCGATGGTCCAATGTTTGTTGATCTGGATGATGCAC‑GTAATG‑GTCCAG‑CCGTTCAGGATTTGTGGATGTTGCTCAATGGCGATAAAGCCGAGCAGC‑GGATGCAACTGGAAACTATTATTGAAGCTTATGAAGAATTTAGCGAGTTCGACACCGCTGAAATCGGACTGATTGAACCTTTAcgc < 1:733529/250‑1 (MQ=255) gCGGGAAGATTTCACCGTTCTGCGGCTA‑CATGGAGACTGCCACGCCGGGAATATTCTCTGGCGCGATGGTCCAATGTTTGTTGATCTGGATGATGCAC‑GTAATG‑GTCCAG‑CCGTTCAGGATTTGTGGATGTTGCTCAATGGCGATAAAGCCGAGCAGC‑GGATGCAACTGGAAACTATTATTGAAGCTTATGAAGAATTTAGCGAGTTCGACACCGCTGAAATCGGACTGATTGAACCTTTACGCGCCATg > 1:225570/1‑250 (MQ=255) gggAAGATTTCACCGTTCTGCGGCTA‑CATGGAGACTGCCACGCCGGGAATATTCTCTGGCGCGATGGTCCAATGTTTGTTGATCTGGATGATGCAC‑GTAATG‑GTCCAG‑CCGTTCAGGATTTGTGGATGTTGCTCAATGGCGATAAAGCCGAGCAGC‑GGATGCAACTGGAAACTATTATTGAAGCTTATGAAGAATTTAGCGAGTTCGACACCGCTGAAATCGGACTGATTGAACCTTTACGCGCCATGCg > 1:884977/1‑250 (MQ=255) gAAGATTTCACCGTTCTGCGGCTA‑CATGGAGACTGCCACGCCGGGAATATTCTCTGGCGCGATGGTCCAATGTTTGTTGATCTGGATGATGCAC‑GTAATG‑GTCCAG‑CCGTTCAGGATTTGTGGATGTTGCTCAATGGCGATAAAGCCGAGCAGC‑GGATGCAACTGGAAACTATTATTGAAGCTTATGAAGAATTTAGCGAGTTCGACACAGCTGAAATCGGACTGATTGAACCTTTACGCGCCATGCGtt > 2:1076212/1‑250 (MQ=255) tCTGCGGCTA‑CATGGAGACTGCCACGCCGGGAATATTCTCTGGCGCGATGGTCCAATGTTTGTTGATCTGGATGATGCAC‑GTAATG‑GTCCAG‑CCGTTCAGGATTTGTGGATGTTGCTCAATGGCGATAAAGCCGAGCAGC‑GGATGCAACTGGAAACTATTATTGAAGCTTATGAAGAATTTAGCGAGTTCGACACCGCTGAAATCGGACTGATTGAACCTTTACGCGCCATGCGTTTGGTTTATTATCtt > 1:9574/1‑250 (MQ=255) tGCGGCTA‑CATGGAGACTGCCACGCCGGGAATATTCTCTGGCGCGATGGTCCAATGTTTGTTGATCTGGATGATGCAC‑GTAATG‑GTCCAG‑CCGTTCAGGATTTGTGGATGTTGCTCAATGGCGATAAAGCCGAGCAGC‑GGATGCAACTGGAAACTATTATTGAAGCTTATGAAGAATTTAGCGAGTTCGACACCGCTGAAATCGGACTGATTGAACCTTTACGCGCCATGCGTTTGGTTTATTATCTTGc > 1:789002/1‑250 (MQ=255) gCGGCTA‑CATTGAGACTGCCAAGCCGGGAATATTCTCTGGCGCGATGGTCCAATGTTTGTTGATCTGGATGATGCAC‑GTAATG‑GTCCAG‑CCGTTCATGATTTGTGGATGTTGCTCAATGGCGATAAAGACGAGTAGC‑GGATGCCACTGGATACTATTCTTATAGCTTATGAAGAATTTAGCGAGTTCGACACCGCAGAAATCGGACGGTTTGAACATTCACGCGCCATGCGTTTCGTTTATTATcatcac > 2:18345/1‑245 (MQ=255) ggCTA‑CATGAAGACTGCCACGCCGGGAATATTCTCTGGCGCGATGGTCCAATGTTTGTTGATCTGGATGATGCAC‑GTAATG‑GTCCAG‑CCGTTCAGGATTTGTGGATGTTGCTCAATGGCGATAAAGCCGAGCAGC‑GGATGCAACTGGAAACTATTATTGAAGCTTATGAAGAATTTAGCGAGTTCGACACCGCTGAAATCGGACTGATTGAACCTTTACGCGCCATGCGTTTGGTTTATTATCTTGCCTg < 2:625042/250‑1 (MQ=255) tA‑CATGGAGACTGCCACGCCGGGAATATTCTCTGGCGCGATGGTCCAATGTTTGTTGATCTGGATGATGCAC‑GTAATG‑GTCCAG‑CCGTTCAGGATTTGTGGATGTTGCTCAATGGCGATAAAGCCGAGCAGC‑GGATGCAACTGGAAACTATTATTGAAGCTTATGAAGAATTTAGCGAGTTCGACACCGCTGAAATCGGACTGATTGAACCTTTACGCGCCATGCGTTTGGTTTATTATCTTGCCTGGc > 2:298673/1‑249 (MQ=255) tGGAGACTGCCACGCCGGGAATATTCTCTGGCGCGATGGTTCAATGTTTGTTGATCTGGATGATGCAC‑GTAATG‑GTCCAG‑CCGTTCAGGATTTGTGGATGTTGCTCAATGGCGATAAAGCCGAGCAGC‑GGATGCAACTGGAAACTATTATTGAAGCTTATGAAGAATTTAGCGAGTTCGACACCGCTGAAATCGGACTGATTGAACATTTACGCGCCATGCGTTTGGTTTATTAGCTTGCCTGGCTAGTg > 2:815600/1‑250 (MQ=255) tGGAGACTGCCACGCCGGGAATATTCTCTGGCGCGATGGTCCAATGTTTGTTGATCTGGATGATGCAC‑GTAATG‑GTCCAG‑CCGTTCAGGATTTGTGGATGTTGCTCAATGGCGATAAAGCCGAGCAGC‑GGATGCAACTGGAAACTATTATTGAAGCTTATGAAGAATTTAGCGAGTTCGACACCGCTGAAATCGGACTGATTGAACCTTTACGCGCCATGCGTTTGGTTTATTATCTTGCCTGGCTAATg > 2:358731/1‑250 (MQ=255) ggAGACTGCCACGCCGGGAATATTCTCTGGCGCGATGGTCCAATGTTTGTTGATCTGGATGATGCAC‑GTAATG‑GTCCAG‑CCGTTCAGGATTTGTGGATGTTGCTCAATGGCGATAAAGCCGAGCAGC‑GGATGCAACTGGAAACTATTATTGAAGCTTATGAAGAATTTAGCGAGTTCGACACCGCTGAAATCGGACTGATTGAACCTTTACGCGCCATGCGTTTGGTTTATTATCTTGCCTGGCTAATgc > 2:829387/1‑250 (MQ=255) gagaCTGCCACGCCGGGAATATTCCCTGGCGCGATGGTCCAATGTTTGTTGATCTGGATGATGCAC‑GTAATG‑GTCCAG‑CCGTTCAGGATTTGTGGATGTTGCTCAATGGCGATAAAGCCGAGCAGC‑GGATGCAACTGGAAACTATTATTGCAGCTTATGAAGAATTTAGCGAGATCGACACCGCTGAAATCGGACTGATTGAACCTTTACGTGCCATGCGTGTGCTTTATTATCTTGCCTGGCTAATgcg > 2:963927/1‑250 (MQ=255) gaCTGCCACGCCGGGAATATTCTCTGGCGCGATGGTCCAATGTTTGTTGATCTGGATGATGCAC‑GTAATG‑GTCCAG‑CCGTTCAGGATTTGTGGATGTTGCTCAATGGCGATAAAGCCGAGCAGC‑GGATGCAACTGGAAACTATTATTGAAGCTTATGAAGAATTTAGCGAGTTCGACACCGCTGAAATCGGACTGATTGAACCTTTACGCGCCATGCGTTTGGTTTATTATCTTGCCTGGCTAATgcggc > 1:592028/1‑250 (MQ=255) gaCTGCCACGCCGGGAATATTCTCTGGCGCGATGGTCCAATGTTTGTTGATCTGGATGATGCAC‑GTAATG‑GTCCAG‑CCGTTCAGGATTTGTGGATGTTGCTCAATGGCGATAAAGCCGAGCAGC‑GGATGCAACTGGAAACTATTATTGAAGCTTATGAAGAATTTAGCGAGTTCGACACCGCTGAAATCGGACTGATTGAACCTTTACGCGCCATGCGTTTGGTTTATTATCTTGCCTGGCTAATgcggc > 2:886605/1‑250 (MQ=255) cTGCCACGCCGGGAATATTCTCTGGCGCGATGGTCCAATGTTTGTTGATCTGGATGATGCAC‑GTAATG‑GTCCAG‑CCGTTCAGGATTTGTGGATGTTGCTCAATGGCGATAAAGCCGAGCAGC‑GGATGCAACTGGAAACTATTATTGAAGCTTATGAAGAATTTAGCGAGTTCGACACCGCTGAAATCGGACTGATTGAACCTTTACGCGCCATGCGTTTGGTTTATTATCTTGCCTGGCTAATGCGGCGt > 1:31637/1‑250 (MQ=255) ccACGCCGGGAATATTCTCTGGCGCGATGGTCCAATGTTTGTTGATCTGGATGATGCAC‑GTAATG‑GTCCAG‑CCGTTCAGGATTTGTGGATGTTGCTCAATGGCGATAAAGCCGAGCAGC‑GGATGCAACTGGAAACTATTATTGAAGCTTATGAAGAATTTAGCGAGTTCGACACCGCTGAAATCGGACTGATTGAACCTTTACGCGCCATGCGTTTGGTTTATTATCTTGCCTGGCTAATGCGGCGTTgg > 2:108509/1‑250 (MQ=255) aCGCCGGGAATATTCTCTGGCGCGATGGTCCAATGTTTGTTGATCTGGATGATGCAC‑GTAATG‑GTCCAG‑CCGTTCAGGATTTGTGGATGTTGCTCAATGGCGATAAAGCCGAGCAGC‑GGATGCAACTGGAAACTATTATTGAAGCTTATGAAGAATTTAGCGAGTTCGACACCGCTGAAATCGGACTGATTGAACCTTTACGCGCCATGCGTTTGGTTTATTATCTTGCCTGGCTAATGCGGCGTTGGGc < 1:374904/250‑1 (MQ=255) gCCGGGAATATTCTCTGGCGCGATGGTCCAATGTTTGTTGATCTGGATGATGCAC‑GTAATG‑GTCCAG‑CCGTTCAGGATTTGTGGATGTTGCTCAATGGCGATAAAGCCGAGCAGC‑GGATGCAACTGGAAACTATTATTGAAGCTTATGAAGAATTTAGCGAGTTCGACACCGCTGAAATCGGACTGATTGAACCTTTACGCGCCATGCGTTTGGTTTATTATCTTGCCTGGCTAATGCGGCGTTGGGCt > 1:879573/1‑249 (MQ=255) cGGGAATATTCTCTGGCGCGATGGTCCAATGTTTGTTGATCTGGATGATGCAC‑GTAATG‑GTCCAG‑CCGTTCAGGATTTGTGGATGTTGCTCAATGGCGATAAAGCCGAGCAGC‑GGATGCAACTGGAAACTATTATTGAAGCTTATGAAGAATTTAGCGAGTTCGACACCGCTGAAATCGGACTGATTGAACCTTTACGCGCCATGCGTTTGGTTTATTATCTTGCCTGGCTAATGCGGCGTTGGGCTGAt > 1:673083/1‑250 (MQ=255) aaTATTCTCTGGCGCGATGGTCCAATGTTTGTTGATCTGGATGATGCAC‑GTAATG‑GTCCAG‑CCGTTCAGGATTTGTGGATGTTGCTCAATGGCGATAAAGCCGAGCAGC‑GGATGCAACTGGAAACTATTATTGAAGCTTATGAAGAATTTAGCGAGTTCGACACCGCTGAAATCGGACTGATTGAACCTTTACGCGCCATGCGTTTGGTTTATTATCTTGCCTGGCTAATGCGGCGTTGGGCTGATCCcg > 2:854039/1‑250 (MQ=255) aaTATTCTCTGGCGCGATGGTCCAATGTTTGTTGATCTGGATGATGCAC‑GTAATG‑GTCCAA‑CCGTTCAGGATTTGTGGATGTTGCTCAATGGCGATAAAGCCGAGCAGC‑GGATGCAACTGGAAACTATTATTGAAGCTTATGAAGAATTTAGCGAGTTCGACACCGCTGAAATCGGACTGATTGAACCTTTACGCGCCATGCGTTTGGTTTATTATCTTGCCTGGCTAATGCGGCGTTGGGCTGATCCcg > 1:321784/1‑250 (MQ=255) | CGGTTGGGCGTTATTTAGGGCGTATGCACCAGACGGGGCGCAAACAGCTTTTTATCCATCGCCCGACCATCGGTTTGAACGAATATCTCATTGAGCCACGCAAGCTGTTTGAGGACGCTACACTGATACCTTCCGGGTTGAAAGCGGCATTCCTGAAAGCGACAGATGAGCTGATTGCCGCCGTTACAGCACACTGGCGGGAAGATTTCACCGTTCTGCGGCTA‑CATGGAGACTGCCACGCCGGGAATATTCTCTGGCGCGATGGTCCAATGTTTGTTGATCTGGATGATGCAC‑GTAATG‑GTCCAG‑CCGTTCAGGATTTGTGGATGTTGCTCAATGGCGATAAAGCCGAGCAGC‑GGATGCAACTGGAAACTATTATTGAAGCTTATGAAGAATTTAGCGAGTTCGACACCGCTGAAATCGGACTGATTGAACCTTTACGCGCCATGCGTTTGGTTTATTATCTTGCCTGGCTAATGCGGCGTTGGGCTGATCCCG > NZ_CP009273/4036145‑4036639 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |