Predicted mutation
evidence seq id position mutation annotation gene description
RA NZ_CP009273 914,535 Δ1 bp coding (6/957 nt) ybjX ← VirK/YbjX family protein

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NZ_CP009273914,5350A.100.0% 359.1 / NA 75coding (6/957 nt)ybjXVirK/YbjX family protein
Reads supporting (aligned to +/- strand):  ref base A (0/0);  new base . (28/47);  total (28/47)

GACGCACAGGCAGTCGCGGCTGGCGCGTTAACAATACATTGAGATTAGGCCAGTGGGAAAGTTCGTTCATCCACTCAACGCTTAAACGCGGCATAATCAACGAGCGCAGCAAAAATTTCTGGCGAAAACTACGGCGATGCCAGAATTTACCCGGCCGACACTGTCCACGTGCCAGACTAAGAAAAAGTGACAGGCTGCTGAGAGATTCAGATGGCGTAAAGGTCCGTTCAGTTAGCTGCGACATATTCATGAAATCAATGGTTATACATGGCGTCGATTTCACCATTGCGTATCTTAACCAAACATCAATAGTGTGATTACTAACGTAAATTTTAGGGTTTTGTTGATATTTCGTTGAAGTTAATGACCCGGATTGGCATATGGAGTATTCAGAAAATTTATGAAAAAGCGGAAAACCGTGAAGAAGCGTTACGTTATTGCGCTGGTGATAGTCATCGCCGGACTGATTACGTTATGGAGAATTCTT  >  NZ_CP009273/914291‑914777
                                                                                                                                                                                                                                                    |                                                                                                                                                                                                                                                  
gACGCACAGGCAGTCGCGGCTGGCGCGTTAACAATACATTGAGATTAGGCCAGTGGGAAAGTTCGTTCATCCACTCAACGCTTAAACGCGGCATAATCAACGAGCGCAGCAAAAATTTCTGGCGAAAACTACGGCGATGCCAGAATTTACCCGGCCGACACTGTCCACGTGCCAGACTAAGAAAAAGTGACAGGCTGCTGAGAGATTCAGATGGCGTAAAGGTCCGTTCAGTTAGCTGCGACATTTCATg                                                                                                                                                                                                                                              <  1:600950/250‑1 (MQ=255)
    cacaGGCAGTCGCGGCTGGCGCGTTAACAATACATTGAGATTAGGCCAGTGGGAAAGTTCGTTCATCCACTCAACGCTTAAACGCGGCATAATCAACGAGCGCAGCAAAAATTTCTGGCGAAAACTACGGCGATGCCAGAATTTACCCGGCCGACACTGTCCACGTGCCAGACTAAGAAAAAGTGACAGGCTGCTGAGAGATTCAGATGGCGTAAAGGTCCGTTCAGTTAGCTGCGACATTTCATGAAAt                                                                                                                                                                                                                                          >  2:499671/1‑250 (MQ=255)
     acaGGCAGTCGCGGCTGGCGCGTTAACAATACATTGAGATTAGGCCAGTGGGAAAGTTCGTTCATCCACTCAACGCTTAAACGCGGCATAATCAACGAGCGCAGCAAAAATTTCTGGCGAAAACTACGGCGATGCCAGAATTTACCCGGCCGACACTGTCCACGTGCCAGACTAAGAAAAAGTGACAGGCTGCTGAGAGATTCAGATGGCGTAAAGGTCCGTTCAGTTAGCTGCGACATTTCATGAAATc                                                                                                                                                                                                                                         <  2:262526/250‑1 (MQ=255)
     acaGGCAGTCGAGGCTGGCTCGTTAACAATACATTGAGATTAGGCCAGTGGGAAAGTTCGTTCATCCACTCAACGCTTAAACGCGGCATAATCAACGAGCGCAGCAAAAATTTCTGGCGAAAACTACGGCGATGCCAGAATTTACCCGGCCGACACTGTCCACGTGCCAGACTAAGAAAAAGTGACAGGCTGCTGAGAGATTCAGATGGCGTAAAGGTCCGTTCAGTTAGCTGCGACATTTCATGAAATc                                                                                                                                                                                                                                         <  2:379453/250‑1 (MQ=255)
      caGGCAGTCGCGGCTGGCGCGTTAACAATACATTGAGATTAGGCCAGTGGGAAAGTTCGTTCATCCACTCAACGCTTAAACGCGGCATAATCAACGAGCGCAGCAAAAATTTCTGGCGAAAACTACGGCGATGCCAGAATTTACCCGGCCGACACTGTCCACGTGCCAGACTAAGAAAAAGTGACGGGCTGCTGAGAGATTCAGATGGCGTAAAGGTCCGTTCAGTTAGCTGCGACATTTCATGAAATCa                                                                                                                                                                                                                                        <  1:365522/250‑1 (MQ=255)
      caGGCAGTCGCGGCTGGCGCGTTAACAATACATTGAGATTAGGCCAGTGGGAAAGTTCGTTCATCCACTCAACGCTTAAACGCGGCATAATCAACGAGCGCAGCAAAAATTTCTGGCGAAAACTACGGCGATGCCAGAATTTACCCGGCCGACACTGTCCACGTGCCAGACTAAGAAAAAGTGACAGGCTGCTGAGAGATTCAGATGGCGTAAAGGTCCGTTCAGTTAGCTGCGACATTTCATGAAATCa                                                                                                                                                                                                                                        <  2:1398/250‑1 (MQ=255)
       aGGCAGTCGCGGCTGGCGCGTTAACAATACATTGAGATTAGGCCAGTGGGAAAGTTCGTTCATCCACTCAACGCTTAAACGCGGCATAATCAACGAGCGCAGCAAAAATTTCTGGCGAAAACTACGGCGATGCCAGAATTTACCCGGCCGACACTGTCCACGTGCCAGACTAAGAAAAAGTGACAGGCTGCTGAGAGATTCAGATGGCGTAAAGGTCCGTTCAGTTAGCTGCGACATTTCATGAAATCaa                                                                                                                                                                                                                                       >  1:90623/1‑250 (MQ=255)
                   cTGGCGCGTTAACAATACATTGAGATTAGGCCAGTGGGAAAGTTCGTTCATCCACTCAACGCTTAAACGCGGCATAATCAACGAGCGCAGCAAAAATTTCTGGCGAAAACTACGGCGATGCCAGAATTTACCCGGCCGACACTGTCCACGTGCCAGACTAAGAAAAAGTGACAGGCTGCTGAGAGATTCAGATGGCGTAAAGGTCCGTTCAGTTAGCTGCGACATTTCATGAAATCAATGGTtataatgg                                                                                                                                                                                                                           >  2:182869/1‑246 (MQ=255)
                       cgcgTTAACAATACATTGAGATTAGGCCAGTGGGAAAGTTCGTTCATCCACTCAACGCTTAAACGCGGCATAATCAACGAGCGCAGCAAAAATTTCTGGCGAAAACTACGGCGATGCCAGAATTTACCCGGCCGACACTGTCCACGTGCCAGACTAAGAAAAAGTGACAGGCTGCTGAGAGATTCAGATGGCGTAAAGGTCCGTTCAGTTAGCTGCGACATTTCATGAAATCAATGGTTATAATGGCGTc                                                                                                                                                                                                                      <  1:363068/250‑1 (MQ=255)
                                aaTACATTGAGATTAGGCCAGTGGGAAAGTTCGTTCATCCACTCAACGCTTAAACGCGGCATAATCAACGAGCGCAGCAAAAATTTCTGGCGAAAACTACGGCGATGCCAGAATTTACCCGGCCGACACTGTCCACGTGCCAGACTAAGAAAAAGTGACAGGCTGCTGAGAGATTCAGATGGCGTAAAGGTCCGTTCAGTTAGCTGCGACATTTCATGAAATCAATGGTTATAATGGCGTCGATTTCAcc                                                                                                                                                                                                             <  2:278975/250‑1 (MQ=255)
                                 aTACATTGAGATTAGGCCAGTGGGAAAGTTCGTTCATCCACTCAACGCTTAAACACGGCATAATCAACGAGCGCAGCAAAAATTTCTGGCGAAAACTACGGCGATGCCAGAATTTACCCGGCCGACACTGTCCACGTGCCAGACTAAGAAAAAGTGACAGGCTGCTGAGAGATTCAGATGGCGTAAAGGTCCGTTCAGTTAGCTGCGACATTTCATGAAATCAATGGTTATAATGGCGTCGATTTCACCa                                                                                                                                                                                                            <  1:225670/250‑1 (MQ=255)
                                   aCATTTAGATTAGGCCAGGGGGGAAGGTCGTTTATCCACTCCACGCTTAAAAGCGGGATAATCAACGAGCGCAGCAAAAATTTCTGGCGAAAACTACGGCGATGCCAGAAATTACCCGGCCCACACTGTGCAAGTGCCAGACTAAGAAAAAAAGACAGGCGGCGGAGAGATTCAAATGGGGGAAAGGTGCGTTCAGTTAGCGGGGGAATTTCATGAAATTAAAGGGTATAACTGCGTCGATTTCACCAtt                                                                                                                                                                                                          >  2:442994/1‑250 (MQ=255)
                                    cATTGAGATTAGGCCAGTGGGAAAGTTCGTTCATCCACTCAACGCTTAAACGCGGCATAATCAACGAGCGCAGCAAAAATTTCTGGCGAAAACTACGGCGATGCCAGAATTTACCCGGCCGACACTGTCCACGTGCCAGACTAAGAAAAAGTGACAGGCTGCTGAGAGATTCAGATGGCGTAAAGGTCCGTTCAGTTAGCTGCGACATTTCATGAAATCAATGGTTATAATGGCGTCGATTTCACCATTg                                                                                                                                                                                                         >  1:130987/1‑250 (MQ=255)
                                     aTTGAGATTAGGCCAGTGGGAAAGTTCGTTCATCCACTCAACGCTTAAACGCGGCATAATCAACGAGCGCAGCAAAAATTTCTGGCGAAAACTACGGCGATGCCAGAATTTACCCGGCCGACACTGTCCACGTGCCAGACTAAGAAAAAGTGACAGGCTGCTGAGAGATTCAGATGGCGTAAAGGTCCGTTCAGTTAGCTGCGACATTTCATGAAATCAATGGTTATAATGGCGTCGATTTCACCATTGc                                                                                                                                                                                                        <  2:314424/250‑1 (MQ=255)
                                         agaTTAGGCCAGTGGGAAAGTTCGTTCATCCACTCAACGCTTAAACGCGGCATAATCAACGAGCGCAGCAAAAATTTCTGGCGAAAACTACGGCGATGCCAGAATTTACCCGGCCGACACTGTCCACGTGCCAGACTAAGAAAAAGTGACAGGCTGCTGAGAGATTCAGATGGCGTAAAGGTCCGTTCAGTTAGCTGCGACATTTCATGAAATCAATGGTTATAATGGCGTCGATTTCACCATTGCGTAt                                                                                                                                                                                                    <  1:592773/250‑1 (MQ=255)
                                           aTTAGGCCAGTGGGAAAGTTCGTTCATCCACTCAACGCTTAAACGCGGCATAATCAACGAGCGCAGCAAAAATTTCTGGCGAAAACTACGGCGATGCCAGAATTTACCCGGCCGACACTGTCCACGTGCCAGACTAAGAAAAAGTGACAGGCTGCTGAGCGATTCAGATGGCGTAAAGGTCCGTTCAGTTAGCTGCGACATTTCATGAAATCAATGGTTATAATGGCGTCGTTTTCACCATTGCGTATCt                                                                                                                                                                                                  >  2:101895/1‑250 (MQ=255)
                                               ggacAGAGGGAAAGTGCTTGAATCCACTCAACGCTTAAACGCGGCATAATCAACGAGCGCAGCAAACATTTCTGGGGAAAACTACGGCGAAGCCAGAATTTACCCGGCCGATACTGTCCACGTGCCAGACTAAGAAAAAGAGACAGGCTGCTGGGAGATTCAGATGGCGTAAAGGTCCGTTCAGTTAACTGCGACATTTCATGAAATCAATGGATATAATGGCGTCGATTTCACCATTGCGTATCTTaa                                                                                                                                                                                               <  2:583053/246‑1 (MQ=255)
                                                 ccAGTGGGAAAGTTCGTTCATCCACTCAACGCTTAAACGCGGCATAATCAACGAGCGCAGCAAAAATTTCTGGCGAAAACTACGGCGATGCCAGAATTTACCCGGCCGACACTGTCCACGTGCCAGACTAAGAAAAAGTGACAGGCTGCTGAGAGATTCAGATGGCGTAAAGGTCCGTTCAGTTAGCTGCGACATTTCATGAAATCAATGGTTATAATGGCGTCGATTTCACCATTGCGTATCTTAACCa                                                                                                                                                                                            <  1:400637/250‑1 (MQ=255)
                                                    gTGGGAAAGTTCGTTCATCCACTCAACGCTTAAACGCGGCATAATCAACGAGCGCAGCAAAAATTTCTGGCGAAAACTACGGCGATGCCAGAATTTACCCGGCCGACACTGTCCACGTGCCAGACTAAGAAAAAGTGACAGGCTGCTGAGAGATTCAGATGGCGTAAAGGTCCGTTCAGTTAGCTGCGACATTTCATGAAATCAATGGTTATAATGGCGTCGATTTCACCATTGCGTATCTTAACCaaa                                                                                                                                                                                          >  1:374665/1‑249 (MQ=255)
                                                     tGGGAAAGTTCGTTCATCCACTCAACGCTTAAACGCGGCATAATCAACGAGCGCAGCAAAAATTTCTGGCGAAAACTACGGCGATGCCAGAATTTACCCGGCCGACACTGTCCACGTGCCAGACTAAGAAAAAGTGACAGGCTGCTGAGAGATTCAGATGGCGTAAAGGTCCGTTCAGTTAGCTGCGACATTTCATGAAATCAATGGTTATAATGGCGTCGATTTCACCATTGCGTATCTTAACCAAACa                                                                                                                                                                                        >  1:360382/1‑250 (MQ=255)
                                                       ggAAAGTTCGTTCATCCACTCAACGCTTAAACGCGGCATAATCAACGAGCGCAGCAAAAATTTCTGGCGAAAACTACGGCGATGCCAGAATTTACCCGGCCGACACTGTCCACGTGCCAGACTAAGAAAAAGTGACAGGCTGCTGAGAGATTCAGATGGCGTAAAGGTCCGTTCAGTTAGCTGCGACATTTCATGAAATCAATGGTTATAATGGCGTCGATTTCACCATTGCGTATCTTAACCAAACATc                                                                                                                                                                                      <  1:290992/250‑1 (MQ=255)
                                                         aaaGTTCGTTCATCCACTCAACGCTTAAACGCGGCATAATCAACGAGCGCAGCAAAAATTTCTGGCGAAAACTACGGCGATGCCAGAATTTACCCGGCCGACACTGTCCACGTGCCAGACTAAGAAAAAGTGACAGGCTGCTGAGAGATTCAGATGGCGTAAAGGTCCGTTCAGTTAGCTGCGACATTTCATGAAATCAATGGTTATAATGGCGTCGATTTCACCATTGCGTATCTTAACCAAACATCaa                                                                                                                                                                                    <  2:39684/250‑1 (MQ=255)
                                                               cgttcATCCACTCAACGCTTAAACGCGGCATAATCAACGAGCGCAGCAAAAATTTCTGGCGAAAACTACGGCGATGCCAGAATTTACCCGGCCGACACTGTCCACGTGCCAGACTAAGAAAAAGTGACAGGCTGCTGAGAGATTCAGATGGCGTAAAGGTCCGTTCAGTTAGCTGCGACATTTCATGAAATCAATGGTTATAATGGCGTCGATTTCACCATTGCGTATCTTAACCAAACATCAATAgtgt                                                                                                                                                                              >  1:550963/1‑250 (MQ=255)
                                                                gttcATCCACTCAACGCTTAAACGCGGCATAATCAACGAGCGCAGCAAAAATTTCTGGCGAAAACTACGGCGATGCCAGAATTTACCCGGCCGACACTGTCCACGTGCCAGACTAAGAAAAAGTGACAGGCTGCTGAGAGATTCAGATGGCGTAAAGGTCCGTTCAGTTAGCTGCGACATTTCATGAAATCAATGGTTATAATGGCGTCGATTTCACCATTGCGTATCTTAACCAAACATCAATAgtgt                                                                                                                                                                              >  1:614920/1‑249 (MQ=255)
                                                                   cATCCACTCAACGCTTAAACGCGGCATAATCAACGAGCGCAGCAAAAATTTCTGGCGAAAACTACGGCGATGCCAGAATTTACCCGGCCGACACTGTCCACGTGCCAGACTAAGAAAAAGTGACAGGCTGCTGAGAGATTCAGATGGCGTAAAGGTCCGTTCAGTTAGCTGCGACATTTCATGAAATCAATGGTTATAATGGCGTCGATTTCACCATTGCGTATCTTAACCAAACATCAATAGTGTGAt                                                                                                                                                                           >  1:525492/1‑249 (MQ=255)
                                                                    aTCCACTCAACGCTTAAACGCGGCATAATCAACGAGCGCAGCAAAAATTTCTGGCGAAAACTACGGCGATGCCAGAATTTACCCGGCCGACACTGTCCACGTGCCAGACTAAGAAAAAGTGACAGGCTGCTGAGAGATTCAGATGGCGTAAAGGTCCGTTCAGTTAGCTGCGACATTTCATGAAATCAATGGTTATAATGGCGTCGATTTCACCATTGCGTATCTTAACCAAACATCAATAGTGTGATTa                                                                                                                                                                         >  1:593264/1‑250 (MQ=255)
                                                                            aaCGCTTAAACGCGGCATAATCAACGAGCGCAGCAAAAATTTCTGGCGAAAACTACGGCGATGCCAGAATTTACCCGGCCGACACTGTCCACGTGCCAGACTAAGAAAAAGTGACAGGCTGCTGAGAGATTCAGATGGCGTAAAGGTCCGTTCAGTTAGCTGCGACATTTCATGAAATCAATGGTTATAATGGCGTCGATTTCACCATTGCGTATCTTAACCAAACATCAATAGTGTGATTACTAACg                                                                                                                                                                   <  1:30842/248‑1 (MQ=255)
                                                                                  tAAACGCGGCATAATCAACGAGCGCAGCAAAAATTTCTGGCGAAAACTACGGCGATGCCAGAATTTACCCGGCCGACACTGTCCACGTGCCAGACTAAGAAAAAGTGACAGGCTGCTGAGAGATTCAGATGGCGTAAAGGTCCGTTCAGTTAGCTGCGACATTTCATGAAATCAATGGTTATAATGGCGTCGATTTCACCATTGCGTATCTTAACCAAACATCAATAGTGTGATTACTAACGTAAAttt                                                                                                                                                            >  2:354340/1‑249 (MQ=255)
                                                                                             tAATCAACGAGCGCAGCAAAAATTTCTGGCGAAAACTACGGCGATGCCAGAATTTACCCGGCCGACACTGTCCACGTGCCAGACTAAGAAAAAGTGACAGGCTGCTGAGAGATTCAGATGGCGTAAAGGTCCGTTCAGTTAGCTGCGACATTTCATGAAATCAATGGTTATAATGGCGTCGATTTCACCATTGCGTATCTTAACCAAACATCAATAGTGTGATTACTAACGTAAATTTTAGGGTTttgtt                                                                                                                                                <  2:85992/250‑1 (MQ=255)
                                                                                             tAATCAACGAGCGCAGCAAAAATTTCTGGCGAAAACTACGGCGATGCCAGAATTTACCCGGCCGACACTGTCCACGTGCCAAACTAAGAAAAAGTGACAGGCTGCTGAGAGATTCAGATGGCGTAAAGGTCCGTTCAGTTAGCTGCGACATTTCATGAAATCAATGGTTATAATGGCGTCGATTTCACCATTGCGTATCTTAACCAAACATCAATAGTGTGATTACTAACGTAAATTTTAGGGTTttgtt                                                                                                                                                <  1:124201/250‑1 (MQ=255)
                                                                                                tCAACGAGCTCAGCAAAAATTTCTGGCGAAAACTACGGCGATGCCAGAATTTACCCGGCCGACACTGTCCACGTGCCAGACTAAAAAAAAGTGACAGGCTGCTGAGAGATTCAGATGGCGTAAAGGTCCGTTCAGTTAGCTGCGACATTTCATGAAATCAATGGTTATAATGGCGTCGATTTCACCATTGCGTATCTTAACCAAACATCAATAGTGTGATTACTAACGTAAATTTTAGGGTTTTGTTGat                                                                                                                                             <  2:580407/250‑1 (MQ=255)
                                                                                                       gcgcAGCAAAAATTTCTGGCGAAAACTACGGCGAGGCCAGAATTTACCCGGCCGACACTGTCCACGTGCCAGACTAAGAAAAAGTGACAGGCTGCTGAGAGATTCAGATGGCGTAAAGGTCCGTTCAGTTAGCTGCGACATTTCATGAAATCAATGGTTATAATGGCGTCGATTTCACCATTGCGTATCTTAACCAAACATCAATAGTGTGATTACTAACGTAAATTTTAGGGTTTTGTTGATATTTCGt                                                                                                                                      <  1:182083/250‑1 (MQ=255)
                                                                                                        cgcAGCAAAAATTTCTGGCGAAAACTACGGCGATGCCAGAATTTACCCGGCCGACACTGTCCACGTGCCAGACTAAGAAAAAGTGACAGGCTGCTGAGAGATTCAGATGGCGTAAAGGTCCGTTCAGTTAGCTGCGACATTTCATGAAATCAATGGTTATAATGGCGTCGATTTCACCATTGCGTATCTTAACCAAACATCAATAGTGTGATTACTAACGTAAATTTTAGGGTTTTGTTGATATTTCGtt                                                                                                                                     <  2:380059/250‑1 (MQ=255)
                                                                                                                  aTTTCTGGCGAAAACTACGGCGATGCCAGAATTTACCCGGCCGACACTGTCCACGTGCCAGACTAAGAAAAAGTGACAGGCTGCTGAGAGATTCAGATGGCGTAAAGGTCCGTTCAGTTAGCTGCGACATTTCATGAAATCAATGGTTATAATGGCGTCGATTTCACCATTGCGTATCTTAACCAAACATCAATAGTGTGATTACTAACGTAAATTTTAGGGTTTTGTTGATATTTCGTTGAAGTTAATg                                                                                                                           <  2:166826/250‑1 (MQ=255)
                                                                                                                   tttCTGGCGAAAACTACGGCGATGCCAGAATTTACCCGGCCGACACTGTCCACGTGCCAGACTAAGAAAAAGTGACAGGCTGCTGAGAGATTCAGATGGCGTAAAGGTCCGTTCAGTTAGCTGCGACATTTCATGAAATCAATGGTTATAATGGCGTCGATTTCACCATTGCGTATCTTAACCAAACATCAATAGTGTGATTACTAACGTAAATTTTAGGGTTTTGTTGATATTTCGTTGAAGTTAATGa                                                                                                                          <  1:128204/250‑1 (MQ=255)
                                                                                                                         gCGAAAACTACGGCGATGCCAGAATGTACCCGGCCGACACTGTCCACGTGCCAGACTAAGAAAAAGTGACAGGCTGCTGAGAGATTCAGATGGCGTAAAGGTCCGTTCAGTTAGCTGCGACATTTCATGAAATCAATGGTTATAATGGCGTCGATTTCACCATTGCGTATCTTAACCAAACATCAATAGTGTGATTACTAACGTAAATTTTAGGGTTTTGTTGATATTTCGTTGAAGTTAATGACCCg                                                                                                                      <  2:461269/248‑1 (MQ=255)
                                                                                                                            aaaaCTACGGCGATGCCAGAATTTACCCGGCCGACACTGTCCACGTGCCAGACTAAGAAAAAGTGACAGGCTGCTGAGAGATTCAGATGGCGTAAAGGTCCGTTCAGTTAGCTGCGACATTTCATGAAATCAATGGTTATAATGGCGTCGATTTCACCATTGCGTATCTTAACCAAACATCAATAGTGTGATTACTAACGTAAATTTTAGGGTTTTGTTGATATTTCGTTGAAGTTAATGACCCGGATTg                                                                                                                 <  2:615975/250‑1 (MQ=255)
                                                                                                                             aaaCTACGGCGATGCCAGAATTTACCCGGCCGACACTGTCCACGTGACAGACTAAGAAAAAGTGACAGGCTGCTGAGAGATTCAGATGGCGTAAAGGTCCGTTCAGTTAGCTGCGACATTTCATGAAATCAATGGTTATAATGGCGTCGATTTCACCATTGCGTATCTTAACCAAACATCAATAGTGTGATTACTAACGTAAATTTTAGGGTTTTGTTGATATTTCGTTGAAGTTAATGACCCGGATTgg                                                                                                                <  1:147549/250‑1 (MQ=255)
                                                                                                                                   cGGCGATGCCAGAATTTACCCGGCCGACACTGTCCACGTGCCAGACTAAGAAAAAGTGACAGGCTGCTGAGAGATTCAGATGGCGTAAAGGTCCGTTCAGTTAGCTGCGACATTTCATGAAATCAATGGTTATAATGGCGTCGATTTCACCATTGCGTATCTTAACCAAACATCAATAGTGTGATTACTAACGTAAATTTTAGGGTTTTGTTGATATTTCGTTGAAGTTAATGACCCGGATTGGCatat                                                                                                           <  1:420989/249‑1 (MQ=255)
                                                                                                                                     gCGATGCCAGAATTTACCCGGCCGACACTGTCCACGTGCCAGACTAAGAAAAAGTGACAGGCTGCTGAGAGATTCAGATGGCGTAAAGGTCCGTTCAGTTAGCTGCGACATTTCATGAAATCAATGGTTATAATGGCGTCGATTTCACCATTGCGTATCTTAACCAAACATCAATAGTGTGATTACTAACGTAAATTTTAGGGTTTTGTTGATATTTCGTTGAAGTTAATGACCCGGATTGGCATATGGa                                                                                                        <  1:61700/250‑1 (MQ=255)
                                                                                                                                      cGATGCCAGAATTTACCCGGCCGACACTGTCCACGTGCCAGACTAAGAAAAAGTGACAGGCTGCTGAGAGATTCAGATGGCGTAAAGGTCCGTTCAGTTAGCTGCGACATTTCATGAAATCAATGGTTATAATGGCGTCGATTTCACCATTGCGTATCTTAACCAAACATCAATAGTGTGATTACTAACGTAAATTTTAGGGTTTTGTTGATATTTCGTTGAAGTTAATGACCCGGATTGGCATATGGAg                                                                                                       <  1:499671/250‑1 (MQ=255)
                                                                                                                                       gATGCCAGAATTTACCCGGCCGACACTGTCCACGTGCCAGACTAAGAAAAAGTGACAGGCTGCTGAGAGATTCAGATGGCGTAAAGGTCCGTTCAGTTAGCTGCGACATTTCATGAAATCAATGGTTATAATGGCGTCGATTTCACCATTGCGTATCTTAACCAAACATCAATAGTGTGATTACTAACGTAAATTTTAGGGTTTTGTTGATATTTCGTTGAAGTTAATGACCCGGATTGGCATATGGAGt                                                                                                      <  2:442115/250‑1 (MQ=255)
                                                                                                                                        aTGCCAGAATTTACCCGGCCGACACTGTCCACGTGCCAGACTAAGAAAAAGTGACAGGCTGCTGAGAGATTCAGATGGCGTAAAGGTCCGTTCAGTTAGCTGCGACATTTCATGAAATCAATGGTTATAATGGCGTCGATTTCACCATTGCGTATCTTAACCAAACATCAATAGTGTGATTACTAACGTAAATTTTAGGGTTTTGTTGATATTTCGTTGAAGTTAATGACCCGGATTGGCATATGGAGTa                                                                                                     <  1:372066/250‑1 (MQ=255)
                                                                                                                                           ccAGAATTTACCCGGCCGACACTGTCCACGTGCCAGACTAAGAAAAAGTGACAGGCTGCTGAGAGATTCAGATGGCGTAAAGGTCCGTTCAGTTAGCTGCGACATTTCATGAAATCAATGGTTATAATGGCGTCGATTTCACCATTGCGTATCTTAACCAAACATCAATAGTGTGATTACTAACGTAAATTTTAGGGTTTTGTTGATATTTCGTTGAAGTTAATGACCCGGATTGGCATATGGAGTAtt                                                                                                   <  1:522347/249‑1 (MQ=255)
                                                                                                                                             aGAATTTACCCGGCCGACACTGTCCACGTGCCAGACTAAGAAAAAGTGACAGGCTGCTGAGAGATTCAGATGGCGTAAAGGTCCGTTCAGTTAGCTGCGACATTTCATGAAATCAATGGTTATAATGGCGTCGATTTCACCATTGCGTATCTTAACCAAACATCAATAGTGTGATTACTAACGTAAATTTTAGGGTTTTGTTGATATTTCGTTGAAGTTAATGACCCGGATTGGCATATGGAGTAtt                                                                                                   >  1:69659/1‑247 (MQ=255)
                                                                                                                                              gAATTTACCCGGCCGACACTGTCCACGTGCCAGACTAAGAAAAAGTGACAGGCTGCTGAGAGATTCAGATGGCGTAAAGGTCCGTTCAGTTAGCTGCGACATTTCATGAAATCAATGGTTATAATGGCGTCGATTTCACCATTGCGTATCTTAACCAAACATCAATAGTGTGATTACTAACGTAAATTTTAGGGTTTTGTTGATATTTCGTTGAAGTTAATGACCCGGATTGGCATATGGAGTATTCAg                                                                                                >  1:213294/1‑249 (MQ=255)
                                                                                                                                                aTTTACCCGGCCGACACTGTCCACGTGCCAGACTAAGAAAAAGTGACAGGCTGCTGAGAGATTCAGATGGCGTAAAGGTCCGTTCAGTTAGCTGCGACATTTCATGAAATCAATGGTTATAATGGCGTCGATTTCACCATTGCGTATCTTAACCAAACATCAATAGTGTGATTACTAACGTAAATTTTAGGGTTTTGTTGATATTTCGTTGAAGTTAATGACCCGGATTGGCATATGGAGTATTCAGaa                                                                                              >  1:573148/1‑249 (MQ=255)
                                                                                                                                                   tACCCGGCCGACACTGTCCACGTGCCAGACTAAGAAAAAGTGACAGGCTGCTGAGAGATTCAGATGGCGTAAAGGTCCGTTCAGTTAGCTGCGACATTTCATGAAATCAATGGTTATAATGGCGTCGATTTCACCATTGCGTATCTTAACCAAACATCAATAGTGTGATTACTAACGTAAATTTTAGGGTTTTGTTGATATTTCGTTGAAGTTAATGACCCGGATTGGCATATGGAGTATTCAGAAAAtt                                                                                          >  2:565025/1‑250 (MQ=255)
                                                                                                                                                    aCCCGGCCGACACTGTCCACGTGCCAGACTAAGAAAAAGTGACAGGCTGCTGAGAGATTCAGATGGCGTAAAGGTCCGTTCAGTTAGCTGCGACATTTCATGAAATCAATGGTTATAATGGCGTCGATTTCACCATTGCGTATCTTAACCAAACATCAATAGTGTGATTACTAACGTAAATTTTAGGGTTTTGTTGATATTTCGTTGAAGTTAATGACCCGGATTGGCATATGGAGTATTCTGAAAAttt                                                                                         >  2:164457/1‑250 (MQ=255)
                                                                                                                                                     cccGGCCGACACTGTCCACGTGCCAGACTAAGAAAAAGTGACAGGCTGCTGAGAGATTCAGATGGCGTAAAGGTCCGTTCAGTTAGCTGCGACATTTCATGAAATCAATGGTTATAATGGCGTCGATTTCACCATTGCGTATCTTAACCAAACATCAATAGTGTGATTACTAACGTAAATTTTAGGGTTTTGTTGATATTTCGTTGAAGTTAATGACCCGGATTGGCATATGGAGTATTCAGAAAATTTa                                                                                        <  2:296611/250‑1 (MQ=255)
                                                                                                                                                                   tCCACGTGCCAGACTAAGAAAAAGTGACAGGCTGCTGAGAGATTCAGATGGCGTAAAGGTCCGTTCAGTTAGCTGCGACATTTCATGAAATCAATGGTTATAATGGCGTCGATTTCATCATTGCGTATCTTAACCAAACATCAATAGTGTGATTACTAACGTAAATTTTAGGGTTTTGTTGATATTTCGTTGAAGTTAATGACCCGGATTGGCATATGGAGTATTCAGAAAATTTATGAAAAAGCGGaa                                                                           <  1:144251/249‑1 (MQ=255)
                                                                                                                                                                   tCCACGTGCCAGACTAAGAAAAAGTGACAGGCTGCTGAGAGATTCAGATGGCGTAAAGGTCCGTTCAGTTAGCTGCGACATTTCATGAAATCAATGGTTATAATGGCGTCGATTTCACCATTGCGTATCTTAACCAAACATCAATAGTGTGATTACTAACGTAAATTTTAGGGTTTTGTTGATATTTCGTTGAAGTTAATGACCCGGATTGGCATATGGAGTATTCAGAAAATTTATGAAAAAGCGGa                                                                            <  2:332816/248‑1 (MQ=255)
                                                                                                                                                                        gTGCCAGACTAAGAAAAAGTGACAGGCTGCTGAGAGATTCAGATGGCGTAAAGGTCCGTTCAGTTAGCTGCGACATTTCATGAAATCAATGGTTATAATGGCGTCGATTTCACCATTGCGTATCTTAACCAAACATCAATAGTGTGATTACTAACGTAAATTTTAGGGTTTTGTTGATATTTCGTTGAAGTTAATGACCCGGATTGGCATATGGAGTATTCAGAAAATTTATGAAAAAGCGGAAAACCGt                                                                     >  1:285751/1‑250 (MQ=255)
                                                                                                                                                                             aGACTAAGAAAAAGTGACAGGCTGCTGAGAGATTCAGATGGCGTAAAGGTCCGTTCAGTTAGCTGCGACATTTCATGAAATCAATGGTTATAATGGCGTCGATTTCACCATTGCGTATCTTAACCAAACATCAATAGTGTGATTACTAACGTAAATTTTAGGGCTTTGTTGATATTTCGTTGAAGTTAATGACCCGGATTGGCATATGGAGTATTCAGACAATTTATGAAAAAGCGGAAAACCGTgaag                                                                 >  2:478172/1‑249 (MQ=255)
                                                                                                                                                                               aCTAAGAAAAAGTGACAGGCTGCTGAGAGATTCAGATGGCGTAAAGGTCCGTTCAGTTAGCTGCGACATTTCATGAAATCAATGGTTATAATGGCGTCGATTTCACCATTGCGTATCTTAACCAAACATCAATAGTGTGATTACTAACGTAAATTTTAGGGTTTTGTTGATATTTCGTTGAAGTTAATGACCCGGATTGGCATATGGAGTATTCAGAAAATTTATGAAAAAGCGGAAAACCGTGaagaag                                                              <  1:506308/250‑1 (MQ=255)
                                                                                                                                                                                    gAAAAAGTGACAGGCTGCTGAGAGATTCAGATGGCGTAAAGGTCCGTTCAGTTAGCTGCGACATTTCATGAAATCAATGGTTATAATGGCGTCGATTTCACCATTGCGTATCTTAACCAAACATCAATAGTGTGATTACTAACGTAAATTTTAGGGTTTTGTTGATATTTCGTTGAAGTTAATGACCCGGATTGGCATATGGAGTATTCAGAAAATTTATGAAAAAGCGGAAAACCGTGAAGAAGcgtta                                                         >  1:284516/1‑250 (MQ=255)
                                                                                                                                                                                        aaGTGACAGGCTGCTGATAGATTCAGATGGCGTAAAGGTCCGTTCAGTTAGCTGCGACATTTCATGAAATCAATGGTTATAATGGCGTCGATTTCACCATTGCGTATCTTAACCAAACATCAATAGTGTGATTACTAACGTAAATTTTAGGGTTTTGTTGATATTTCGTTGAAGTTAATGACCCGGATTGGCATATGGAGTATTCAGAAAATTTATGAAAAAGCGGAAAACCGTGAAGAAGcgttacgtt                                                     <  1:236975/250‑1 (MQ=255)
                                                                                                                                                                                               aGGCTGCTGAGAGATTCAGATGGCGTAAAGGTCCGTTCAGTTAGCTGCGACATTTCATGAAATCAATGGTTATAATGGCGTCGATTTCACCATTGCGTATCTTAACCAAACATCAATAGTGTGATTACTAACGTAAATTTTAGGGTTTTGTTGATATTTCGTTGAAGTTAATGACCCGGATTGGCATATGGAGTATTCAGAAAATTTATGAAAAAGCGGAAAACCGTGAAGAAGCGTTACGTTATTgcgc                                              >  1:120743/1‑250 (MQ=255)
                                                                                                                                                                                                  ctgctgAGAGATTCAGATGGCGTAAAGGTCCGTTCAGTTAGCTGCGACATTTCATGAAATCAATGGTTATAATGGCGTCGATTTCACCATTGCGTATCTTAACCAAACATCAATAGTGTGATTACTAACGTAAATTTTAGGGTTTTGTTGATATTTCGTTGAAATTAATGACCCGGATTGGCATATGGAGTATTCAGAAAATTTATGAAAAAGCGGAAAACCGTGAAGAAGCGTTACGTTATTGCGCTgg                                           <  2:557985/250‑1 (MQ=255)
                                                                                                                                                                                                     ctgAGAGATTCAGATGGCGTAAAGGTCCGTTCAGTTAGCTGCGACATTTCATGAAATCAATGGTTATAATGGCGTCGATTTCACCATTGCGTATCTTAACCAAACATCAATAGTGTGATTACTAACGTAAATTTTAGGGTTTTGTTGATATTTCGTTGAAGTTAATGACCCGGATTGGCATATGGAGTATTCAGAAAATTTATGAAAAAGCGGAAAACCGTGAAGAAGCGTTACGTTATTGCGCTGGTGa                                        <  1:172756/250‑1 (MQ=255)
                                                                                                                                                                                                             ttCGGATGGCGTAAAGGTCCGTTCAGTTAGCTGCGACATTTCATGAAATCAATGGTTATAATGGCGTCGATTTCACCATTGCGTATCTTAACCAAACATCAATAGTGTGATTACTAACGTAAATTTTAGGGTTTTGTTGATATTTCGTTGAAGTTAATGACCCGGATTGGCATATGGAGTATTCAGAAAATTTATGAAAAAGCGGAAAACCGTGAAGAAGCGTTACGTTATTGCGCTGGTGATAGTCATc                                <  1:418482/250‑1 (MQ=255)
                                                                                                                                                                                                               cAGATGGCGTAAAGGTCCGTTCAGTTAGCTGCGACATTTCATGAAATCAATGGTTATAATGGCGTCGATTTCACCATTGCGTATCTTAACCAAACATCAATAGTGTGATTACTAACGTAAATTTTAGGGTTTTGTTGATATTTCGTTGAAGTTAATGACCCGGATTGGCATATGGAGTATTCAGAAAATTTATGAAAAAGCGGAAAACCGTGAAGAAGCGTTACGTTATTGCGCTGGTGATAGTCATCGc                              >  1:607068/1‑250 (MQ=255)
                                                                                                                                                                                                                 gATGGCGTAAAGGTCCGTTCAGTTAGCTGCGACATTTCATGAAATCAATGGTTATAATGGCGTCGATTTCACCATTGCGTATCTTAACCAAACATCAATAGTGTGATTACTAACGTAAATTTTAGGGTTTTGTTGATATTTCGTTGAAGTTAATGACCCGGATTGGCATATGGAGTATTCAGAAAATTTATGAAAAAGCGGAAAACCGTGAAGAAGCGTTACGTTATTGCGCTGGTGATAGTCATCGCCg                            <  2:285751/250‑1 (MQ=255)
                                                                                                                                                                                                                    ggCGTAAAGGTCCGTTCAGTTAGCTGCTACATTTCATGGAATCAATGGTTATAATGGCGTCGATTTCACCAATGCGTATCTTAACCAAACATCAATAGTGTGATTACTAACGTAAATTTTAGGGTTTTGTTGATATTTCGGTGAAGTTAATGACCCGGATTGGCATATGGATTATTCAGAAAATTTATGAAAAAGCGGAAAACCGTGAAGAAGCGTTACGTTATTGCGCTGGTGATAGTCATCGCCGGAc                         <  2:118716/250‑1 (MQ=255)
                                                                                                                                                                                                                    ggCGTAAAGGTCCGTTCAGTTAGCTGCGACATTTCATGAAATCAATGGTTATAATGGCGTCGATTTCACCATTGCGTATCTTAACCAAACATCAATAGTGTGATTACTAACGTAAATTTTAGGGTTTTGTTGATATTTCGTTGAAGTTAATGACCCGGATTGGCATATGGAGTATTCAGAAAATTTATGAAAAAGCGGAAAACCGTGAAGAAGCGTTACGTTATTGCGCTGGTGATAGTCATCGCCGGAc                         >  1:234303/1‑250 (MQ=255)
                                                                                                                                                                                                                    ggCGTAAAGGTCCGTTCAGTTAGCTGCGACATTTCATGAAATCAATGGTTATAATGGCGTCGATTTCACCATTGCGTATCTTAACCAAACATCAATAGTGTGATTACTAACGTAAATTTTAGGGTTTTGTTGATATTTCGTTGAAGTTAATGACCCGGATTGGCATATGGAGTATTCAGAAAATTTATGAAAAAGCGGAAAACCGTGAAGAAGCGTTACGTTATTGCGCTGGTGATAGTCATCGCCGGAc                         >  2:594570/1‑250 (MQ=255)
                                                                                                                                                                                                                     gCGTAAAGGTCCGATCAGTTAGCTGCGACATTTCATGAAATCAATGGTTATAATGGCGTCGATTTCACCATTGCGTATCTTAACCAAACATCAATAGTGTGATTACTAACGTAAATTTTAGGGTTTTGTTGATATTTCGTTGAAGTTAATGACCCGGATTGGCATATGGAGTATTCAGAAAATTTATGAAAAAGCGGAAAACCGTGAAGAAGCGTTACGTTATTGCGCTGGTGATAGTCATCGCCGGACt                        <  2:262324/250‑1 (MQ=255)
                                                                                                                                                                                                                      cGTAAAGGTCCGTTCAGTTAGCTGCGACATTTCATGAAATCAATGGTTATAATGGCGTCGATTTCACCATTGCGTATCTTAACCAAACATCAATAGTGTGATTACTAACGTAAATTTTAGGGTTTTGTTGATATTTCGTTGAAGTTAATGACCCGGATTGGCATATGGAGTATTCAGAAAATTTATGAAAAAGCGGAAAACCGTGAAGAAGCGTTACGTTATTGCGCTGGTGATAGTCATCGCCGGACt                        >  1:215564/1‑249 (MQ=255)
                                                                                                                                                                                                                        tAAAGGTCCGTTCAGTTAGCTGCGACATTTCATGAAATCAATGGTTATAATGGCGTCGATTTCACCATTGCGTATCTTAACCAAACATCAATAGTGTGATTACTAACGTAAATTTTAGGGTTTTGTTGATATTTCGTTGAAGTTAATGACCCGGATTGGCATATGGAGTATTCAGAAAATTTATGAAAAAGCGGAAAACCGTGAAGAAGCGTTACGTTATTGCGCTGGTGATAGTCATCGCCGGACTGAt                     <  2:445125/250‑1 (MQ=255)
                                                                                                                                                                                                                                cGTTCAGTTAGCTGCGACATTTCATGAAATCAATGGTTATAATGGCGTCGATTTCACCATTGCGTATCTTAACCAAACATCAATAGTGTGATTACTAACGTAAATTTTAGGGTTTTGTTGATATTTCGTTGAAGTTAATGACCCGGATTGGCATATGGAGTATTCAGAAAATTTATGAAAAAGCGGAAAACCGTGAAGAAGCGTTACGTTATTGCGCTGGTGATAGTCATCGCCGGACTGATTACGTTAt             <  1:525100/250‑1 (MQ=255)
                                                                                                                                                                                                                                     aGTTAGCTGCGACATTTCATGAAATCAATGGTTATAATGGCGTCGATTTCACCATTGCGTATCTTAACCAAACATCAATAGTGTGATTACTAACGTAAATTTTAGGGTTTTGTTGATATTTCGTTGAAGTTAATGACCCGGATTGGCATATGGAGTATTCAGAAAATTTATGAAAAAGCGGAAAACCGTGAAGAAGCGTTACGTTATTGCGCTGGTGATAGTCATCGCCGGACTGATTACGTTATGgaga        <  1:631888/250‑1 (MQ=255)
                                                                                                                                                                                                                                     aGTTAGCTGCGACATTTCATGAAATCAATGGTTATAATGGCGTCGATTTCACCATTGCGTATCTTAACCAAACATCAATAGTGTGATTACTAACGTAAATTTTAGGGTTTTGTTGATATTTCGTTGAAGTTAATGACCCGGATTGGCATATGGAGTATTCAGAAAATTTATGAAAAAGCGGAAAACCGTGAAGAAGCGTTACGTTATTGCGCTGGTGATAGTCATCGCCGGACTGATTACGTTATGgag         <  1:823/249‑1 (MQ=255)
                                                                                                                                                                                                                                     aGTTAGCTGCGACATTTCATGAAATCAATGGTTATAATGGCGTCGATTTCACCATTGCGTATCTTAACCAAACATCAATAGTGTGATTACTAACGTAAATTTTAGGGTTTTGTTGATATTTCGTTGAAGTTAATGACCCGGATTGGCATATGGAGTATTCAGAAAATTTATGAAAAAGCGGAAAACCGTGAAGAAGCGTTACGTTATTGCGCTGGTGATAGTCATCGCCGGACTGATTACGTTATGgag         >  1:29566/1‑249 (MQ=255)
                                                                                                                                                                                                                                          gCTGCGACATTTCATGAAATCAATGGTTATAATGGCGTCGATTTCACCATTGCGTATCTTAACCAAACATCAATAGTGTGATTACTAACGTAAATTGTAGGGTTTTGTTGATATTTCGTTGAAGTTAATGACACGGATTGGCATATGGAGTATTCAGAAAATTTATGAAAAAGCGGAAAACCGTGAAGAAGCGTTACGTTATTGCGCTGGTGATAGTCATCGCCGGACTGATTACGTTATGGAGAATTc    <  1:404181/249‑1 (MQ=255)
                                                                                                                                                                                                                                            tGCGACATTTCATGAAATCAATGGTTATAATGGCGTCGATTTCACCATTGCGTATCTTAACCAAACATCAATAGTGTGATTACTAACGTAAATTTTAGGGTTTTGTTGATATTTCGTTGAAGTTAATGACCCGGATTGGCATATGGAGTATTCAGAAAATTTATGAAAAAGCGGAAAACCGTGAAGAAGCGTTACGTTATTGCGCTGGTGATAGTCATCGCCGGACTGATTACGTTATGGAGAATTCtt  >  2:564469/1‑249 (MQ=255)
                                                                                                                                                                                                                                                    |                                                                                                                                                                                                                                                  
GACGCACAGGCAGTCGCGGCTGGCGCGTTAACAATACATTGAGATTAGGCCAGTGGGAAAGTTCGTTCATCCACTCAACGCTTAAACGCGGCATAATCAACGAGCGCAGCAAAAATTTCTGGCGAAAACTACGGCGATGCCAGAATTTACCCGGCCGACACTGTCCACGTGCCAGACTAAGAAAAAGTGACAGGCTGCTGAGAGATTCAGATGGCGTAAAGGTCCGTTCAGTTAGCTGCGACATATTCATGAAATCAATGGTTATACATGGCGTCGATTTCACCATTGCGTATCTTAACCAAACATCAATAGTGTGATTACTAACGTAAATTTTAGGGTTTTGTTGATATTTCGTTGAAGTTAATGACCCGGATTGGCATATGGAGTATTCAGAAAATTTATGAAAAAGCGGAAAACCGTGAAGAAGCGTTACGTTATTGCGCTGGTGATAGTCATCGCCGGACTGATTACGTTATGGAGAATTCTT  >  NZ_CP009273/914291‑914777

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: