| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NZ_CP009273 | 2,001,854 | 0 | G | T | 28.3% | 140.3 / 13.2 | 61 | G33C (GGC→TGC) | yedE | selenium metabolism membrane protein YedE/FdhT |
| Reads supporting (aligned to +/- strand): ref base G (16/27); new base T (17/0); total (33/28) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 4.15e-06 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
| Rejected as consensus: Frequency below/above cutoff threshold. | |||||||||||
ATTAAAGCCCTGATGTCGCCAGCCTTTCAAGGTTCAGAGAGAAATTTGATCTAACTATTATTTTTGTGAATTATTACCCCGAAAATAAATTTGCATGGTGTATGATTCGCGACTCTTGTTTCAAACCTTCTGAGTTCAGAGGCTACATTCATGTCATGGCAGCAATTCAAACACGCCTGGTTGATTAAATTCTGGGCCCCCATCCCTGCGGTCATCGCGGCGGGTATTCTCTCTACTTACTA‑TTTTGGCATTACTGGCACCTTTTGGGCTG‑TCACGGGTGAATTTACCCGTTGGGGCGGCCAGCTCCT‑GCAACTGTTCGGCGTCCATGCTGAAGAGTGGGGTTACTTTAAAATTATCCATCTGGAAGGATCGCCA‑TTAACCCGCATCGACGGGATGATGATCCTCGGTATGTTTGGCGGCTGCTTTGCCGCAGCGCTGTGGGCCAACAATGTCAAACTGCGAATGCCGCGCAGCCGTATCCGCATTATGCAGG > NZ_CP009273/2001608‑2002100 | aTTAAAGCCCTGATGTCGCCAGCCTTTCAAGGTTCAGAGAGAAATTTGATCTAACTATTATTTTTGTGAATTATTACCCCGAAAATAAATTTGCATGGTGTATGATTCGCGACTCTTGTTTCAAACCTTCTGAGTTCAGAGGCTACATTCATGTCATGGCAGCAATTCAAACACGCCTGGTTGATTAAATTCTGGGCCCCCATCCCTGCGGTCATCGCGGCGGGTGTTCTCTCTACCTACTA‑TTTTTGcc > 2:149402/1‑249 (MQ=255) aaGCCCTGATGTCGCCAGCCTTTCAAGGTTCAGAGAGAAATTTGATCTAACTATTATTTTTGTGAATTATTACCCCGAAAATAAATTTGCATGGTGTATGATTCGCGACTCTTGTTTCAAACCTTCTGAGTTCAGAGGCTACATTCATGTCATGGCAGCAATTCAAACACGCCTGGTTGATTAAATTCTGGGCCCCCATCCCTGCGGTCATCGCGGCGGGTATTCTCTCTACTTACTA‑TTTTGGCATTa < 2:133686/249‑1 (MQ=255) aaGCCCTGATGTCGCCAGCCTTTCAAGGTTCAGAGAGAAATTTGATCTAACTATTATTTTTGTGAATTATTACCCCGAAAATAAATTTGCATGGTGTATGATTCGCGACTCTTGTTTCAAACCTTCTGAGTTCAGAGGCTACATTCATGTCATGGCAGCAATTCAAACACGCCTGGTTGATTAAATTCTGGGCCCCCATCCCTGCGGTCATCGCGGCGGGTATTCTCTCTACTTACTA‑TTTTGGCATTAc < 1:559887/250‑1 (MQ=255) tCGCCAGCCTTTCAAGGTTCAGAGAGAAATTTGATCTAACTATTATTTTTGTGAATTATTACCCCGAAAATAAATTTGCATGGTGTATGATTCGCGACTCTTGTTTCAAACCTTCTGAGTTCAGAGGCTACATTCATGTCATGGCAGCAATTCAAACACGCCTGGTTGATTAAATTCTGGGCCCCCATCCCTGCGGTCATCGCGGCGGGTATTCTCTCTACTTACTA‑TTTTGGCATTACTGGCACCtttt < 2:520689/250‑1 (MQ=255) ccTTTCAAGGTTCAGAGAGAAATTTGATCTAACTATTATTTTTGTGAATTATTACCCCGAAAATAAATTTGCATGGTGTATGATTCGCGACTCTTGTTTCAAACCTTCTGAGTTCAGAGGCTACATTCATGTCATGGCAGCAATTCAAACACGCCTGGTTGATTAAATTCTGGGCTCCCATCCCTGCGGTCATCGCGGCGGGTAGTTTCTTTTCTTACCA‑TCTTTGCCTTCATGGCCGCTTTTGTGgtg‑t > 2:338682/1‑250 (MQ=255) ccTTTCAAGGTTCAGAGAGAAATTTGATCTAACTATTATTTTTGTGAATTATTACCCCGAAAATAAATTTGCATGGTGTATGATTCGCGACTCTTGTTTCAAACCTTCTGAGTTCAGAGGCTACATTCATGTCATGGCAGCAATTCAAACACGCCTGGTTGATTAAATTCTGGGCCCCCATCCCTGCGGTCATCGCGGCGGGGTTTCTCTCTACTTAATA‑TTTTTTGATTTCTTGCCACTTTTGGGCCG‑t > 1:343479/1‑250 (MQ=255) ttCAAGGTTCAGAGAGAAATTTGATCTAACTATTATTTTTGTGAATTATTACCCCGAAAATAAATTTGCATGGTGTATGATTCGCGACTCTTGTTTCAAACCTTCTGAGTTCAGAGGCTACATTCATGTCATGGCAGCAATTCAAACACGCCTGGTTGATTAAATTCTGGGCCCCCATCCCTGCGGTCATCGCGGCGGGTATTTTCTCTCCTTACTT‑TTTTTGCATTACTTGCACCTTTTTGGCTG‑Tccc > 1:477280/1‑248 (MQ=255) agagagAAATTTGATCTAACTATTATTTTTGTGAATTATTACCCCGAAAATAAATTTGCATGGTGTATGATTCGCGACTCTTGTTTCAAACCTTCTGAGTTCAGAGGCTACATTCATGTCATGGCAGCAATTCAAACACGCCTGGTTGATTAAATTCTGGGCCCCCATCCCTGCGGTCATCGCGGCGGGTATTTTCTCTACTTACTA‑TTTTGGCATTACTGGCACCTTTTGGGCTG‑TCACGGGTGAAttt > 1:522270/1‑250 (MQ=255) agagaAATTTGATCTAACTATTATTTTTGTGAATTATTACCCCGAAAATAAATTTGCATGGTGTATGATTCGCGACTCTTGTTTCAAACCTTCTGAGTTCAGAGGCTACATTCATGTCATGGCAGCAATTCAAACACGCCTGGTTGATTAAATTCTGGGCCCCCATCCCTGCGGTCATCGCGGCGGGGATTCTCTCTACTTACTA‑TTTTGGCATTACTGGCACCTTTTGGGCTG‑TCACGGGGGAAttttc > 1:465351/1‑248 (MQ=255) aTCTAACTATTATTTTTGTGAATTATTACCCCGAAAATAAATTTGCATGGTGTATGATTCGCGACTCTTGTTTCAAACCTTCTGAGTTCAGAGGCTACATTCATGTCATGGCAGCAATTCAAACACGCCTGGTTGATTAAATTCTGGGCCCCCATCCCTGCGGTCATCGCGGCGGGGAGTTTCTCTACTTACTA‑TTTTTGCCTTTCTGGCCCCCTTTGTGTTG‑TCTCCGGTGAATTTTCCCGCTgtgggg > 2:407564/1‑248 (MQ=255) tAACTATTATTTTTGTGAATTATTACCCCGAAAATAAATTTGCATGGTGTATGATTCGCGACTCTTGTTTCAAACCTTCTGAGTTCAGAGGCTACATTCATGTCATGGCAGCAATTCAAACACGCCTGGTTGATTAAATTCTGGGCCCCCATCCCTGCGGTCATCGCGGCGGGGATTCTCTCTACTTTCTA‑TTTTGGCATTACTGGCACCTTTTGGGCTG‑TCACGGGTGAATTTAACCGTTGGGGCGGcc > 1:210561/1‑250 (MQ=255) aCTATTATTTTTGTGAATTATTACCCCGAAAATAAATTTGCATGGTGTATGATTCGCGACTCTTGTTTCAAACCTTCTGAGTTCAGAGGCTACATTCATGTCATGGCAGCAATTCAAACACGCCTGGTTGATTAAATTCTGGGCCCCCATCCCTGCGGTCATCGCGGCGGGTATTCTCTCTACTTACTA‑TTTTGGCATTACTGGCACCTTTTGGGCTG‑TCACGGGTGAATTTACCCGTTGGggcgg < 2:400890/246‑1 (MQ=255) attTTTGTGAATTATTACCCCGAAAATAAATTTGCATGGTGTATGATTCGCGACTCTTGTTTCAAACCTTCTGAGTTCAGAGGCTACATTCATGTCATGGCAGCAATTCAAACACGCCTGGTTGATTAAATTCTGGGCCCCCATCCCTGCGGTCATCGCGGCGGGTATTCTCTCTACTTACTA‑TTTTGGCATTACTGGCACCTTTTTGGCTG‑TCACGGGTGAATTTACCCGTTGGGGCGGCCAGCTCCT‑g > 1:255251/1‑250 (MQ=255) ttttGTGAATTATTACCCCGAAAATAAATTTGCATGGTGTATGATTCGCGACTCTTGTTTCAAACCTTCTGAGTTCAGAGGCTACATTCATGTCATGGCAGCAATTCAAACACGCCTGGTTGATTAAATTCTGGGCCCCCATCCCTGCGGTCATCGCGGCGGGGATTTTCTCTTCTTTCCATTTTTTGTTTTATTGG‑ACCTTTTTGGGTGTTCTGGGGTG‑ATTTTCCCCTTGGGGCGGCCCGCCCCT‑Gc > 1:156604/1‑249 (MQ=255) tttGTGAATTATTACCCCGAAAATAAATTTGCATGGTGTATGATTCGCGACTCTTGTTTCAAACCTTCTGAGTTCAGAGGCTACATTCATGTCATGGCAGCAATTCAAACACGCCTGGTTGATTAAATTCTGGGCCCCCATCCCTGCGGTCATCGCGGCGGGTATTCTCTCTACTTACTA‑TTTTGGCATTACTGGCACCTTTTGGGCTG‑TCACGGGTGAATTTACCCGTTGGGGCGGCCAGCTCCT‑GCa < 1:398897/249‑1 (MQ=255) attattACCCCGAAAATAAATTTTCATGGTTTATGATTCGCGACTCTTGTTTCAAACCTTCTGAGTTCAGAGGCTACATTCATGTCATGGCAGCAATTCAAACACGCCTGGTTGATTAAATTCTGGGCCCCCATCCCTGCGGTCATCGCGGCGGGTATTCTCTCTACTTACTA‑TTTTGGCATTACTGGCACCTTTTGGGCTG‑TCACGGGTGAATTTACCCGTTGGGGCGGCCAGCTCCT‑GCAACTGTTCg < 2:274941/250‑1 (MQ=255) ttattaCCCCGAAAATAAATTTGCATGGTGTATGATTCGCGACTCTTGTTTCAAACCTTCTGAGTTCAGAGGCTACATTCATGTCATGGCAGCAATTCAAACACGCCTGGTTGATTAAATTCTGGGCCCCCATCCCTGCGGTCATCGCGGCGGGTATTCTCTTTAATTTCTA‑TTTTTGCATTACTGGCCCCTTTTTGGCTG‑TCCCGGGTGAATTTTTCCGTTTGGGCGGGCCGCTCCC‑GCAACTGtttcg > 2:384300/1‑247 (MQ=255) atttCCCCGAAAATAAATTTGCATGGTGTAGGATTCGCGACTCTTGTTTCAAACCTTCTGAGTTCAGAGGCTACATTCATGTCGTGGCAGCAATTCAAACACGCCTGGTTGATTAAATTCTGGGCCCCCATCCCTGCGGTCATCGCGGCGGGTATTCTCTCTACTTACTA‑TTTTGGCATTACTGGCACCTTTTGGGCTG‑TCACGGGTGAATTTACCCGTTGGGGCGGCCAGCTCCT‑GCAACTGTTCGGc < 2:545109/249‑1 (MQ=255) ttaCCCCGAAAATAAATTTGCATGGTGTATGATTCGCGACTCTTGTTTCAAACCTTCTGAGTTCAGAGGCTACATTCATGTCATGGCAGCAATTCAAACACGCCTGGTTGATTAAATTCTGGGCCCCCATCCCTGCGGTCATCGCGGCGGGTATTCTCTCTACTTACTA‑TTTTGGCATTACTGGCACCTTTTGGGCTG‑TCACGGGTGAATTTACCCGTTGGGGCGGCCAGCTCCT‑GCAACTGTTCGGCg < 1:171468/249‑1 (MQ=255) taCCCCGAAAATAAATTTGCATGGTGTATGATTCGCGACTCTTGTTTCAAACCTTCTGAGTTCAGAGGCTACATTCATGTCATGGCAGCAATTCAAACACGCCTGGTTGATTAAATTCTGGGCCCCCATCCCTGCGGTCATCGCGGCGGGGATTCTCTCTACTTACTA‑TTTTGGCATTTCTGGCACCTTTTTGGCTG‑TCACGGGGGGATTTTCCCGTTTGGGGGGCCCGCTCCT‑CCACCTGTTCGGCggc > 2:229561/1‑248 (MQ=255) cGAAAATAAATTTGCATGGTGTATGATTCGCGACTCTTGTTTCAAACCTTCTGAGTTCAGAGGCTACATTCATGTCATGGCAGCAATTCAAACACGCCTGGTTGATTAAATTCTGGGCCCCCATCCCTGCGGTCATCGCGGCGGGTATTCTCTCTACTTACTA‑TTTTTGCATTACTGGCACCCTTTTGGCTG‑TCACGGGGGAATTTACCCGTTGGGGCGGCCAGCCCCT‑GCAACTGTTCGGCGTCCATGc > 1:350137/1‑250 (MQ=255) gAAAATAAATTTGCATGGTGTATGATTCGCGACTCTTGTTTCAAACCTTCTGAGTTCAGAGGCTACATTCATGTCATGGCAGCAATTCAAACACGCCTGGTTGATTAAATTCTGGGCCCCCATCCCTGCGGTCATCGCGGCGGGTATTCTCTCTACTTACTA‑TTTTGGCATTACTGGCACCTTTTGGGCTG‑TCACGGGTGAATTTACCCGTTGGGGCGGCCAGCTCCT‑GCAACTGTTCGGCGTCCATGCt < 1:224674/250‑1 (MQ=255) gAAAATAAATTTGCATGGTGTATGATTCGCGACTCTTGTTTCAAACCTTCTGAGTTCAGAGGCTACATTCATGTCATGGCAGCAATGCAAACACGCCTGGTTGATTAAATTCTGGGCCCCCATCCCTGCGGTCATCGCGGCGGGTATTCTCTCTACTTACTA‑TTTTGGCATTACTGGCACCTTTTGGGCTG‑TCACGGGTGAATTTACCCGTTGGGGCGGCCAGCTCCT‑GCAACTGTTCGGCGTCCATGCt < 1:273033/250‑1 (MQ=255) aaaaTAAATTTGCATGGTGTATGATTCGCGACTCTTGTTTCAAACCTTCTGAGTTCAGAGGCTACATTCATGTCATGGCAGCAATTCAAACACGCCTGGTTGATTAAATTCTGGGCCCCCATCCCTGCGGTCATCGCGGCGGGTATTCTCTCTACTTACTA‑TTTTGGCATTACTGGCACCTTTTGGGCTG‑TCACGGGTGAATTTACCCGTTGGGGCGGCCAGCTCCT‑GCAACTGTTCGGCGTCCATGCTg < 2:616251/250‑1 (MQ=255) aaaaTAAATTTGCATGGTGTATGATTCGCGACTCTTGTTTCAAACCTTCTGAGTTCAGAGGCTACATTCATGTCATGGCAGCAATTCAAACACGCCTGGTTGATTAAATTCTGGGCCCCCATCCCTGCGGTCATCGCGGCGGGTATTCTCTCTACTTACTA‑TTTTGGCATTACTGGCACCTTTTGGGCTG‑TCACGGGGGAATTTACCCGTTGGGGCGGCCAGCTCCT‑GCAACTGTTTGGCGTCCATGCt > 1:38470/1‑249 (MQ=255) aaataaatTTGCATGGTGTATGATTCGCGACTCTTGTTTCAAACCTTCTGAGTTCAGAGGCTACATTCATGTCATGGCAGCAATTCAAACACGCCTGGTTGATTAAATTCTGGGCCCCCATCCCTGCGGTCATCGCGGCGGGTATTCTCTCTACTTACTA‑TTTTGGCATTACTGGCACCTTTTGGGCTG‑TCACGGGTGAATTTACCCGTTGGGGCGGCCAGCTCCT‑GCAACTGTTCGGCGTCCATGCTGa < 2:83472/250‑1 (MQ=255) aataaatTTGCATGGTGTATGATTCGCGACTCTTGTTTCAAACCTTCTGAGTTCAGAGGCTACTTTCATGTCATGGCAGCAATTCAAACACGCCTGGTTGATTAAATTCTGGGCCCCCATCCCTGCGGTCATCGCGGCGGGTATTCTTTCTACTTTCTA‑TTTTGGCATTACTGGCACCTTTTTGGCTG‑TCACGGGTGAATTTTCCCGTTGGGGCGGCCAGCTCCT‑GCAACTGTTTGGCGTCCATTCTg > 1:55051/1‑248 (MQ=255) taaatTTGCATGGTGTATGATTCGCGACTCTTGTTTCAAACCTTCTGAGTTCAGAGGCTACATTCATGTCATGGCAGCAATTCAAACACGCCTGGTTGATTAAATTCTGGGCCCCCATCCCTGCGGTCATCGCGGCGGGGAATCTCTCTTCTTTCTA‑TTTTTGCCTTTCTTGCCCCCTTTTGGCTT‑TTCCGGGTGAATTTTTCCGCTTGGGCGGCGCGCTCCT‑GCAACTGTTCGGCGTCCATGCttac > 2:574417/1‑245 (MQ=255) aatTTGCATGGTGTATGATTCGCGACTCTTGTTTCAAACCTTCTGAGTTCAGAGGCTACATTCATGTCATGGCAGCAATTCAAACACGCCTGGTTGATTAAATTCTGGGCCCCCATCCCTGCGGTCATCGCGGCGGGTATTCTCTCTACTTACTA‑TTTTGGCATTACTGGCACCTTTTGGGCTG‑TCACGGGTGAATTTACCCGTTGGGGCGGCCAGCTCCT‑GCAACTGTTCGGCGTCCATGCTGAagag < 1:221400/249‑1 (MQ=255) cATGGTGTATGATTCGCGACTCTTGTTTCAAACCTTCTGAGTTCAGAGGCTACATTCATGTCATGGCAGCAATTCAAACACGCCTGGTTGATTAAATTCTGGG‑CCCCATCCCTGCGGTCATCGCGGCGGGTATTCTCTCTACTTACTA‑TTTTGGCATTACTGGCACCTTTTGGGCTG‑TCACGGGTGAATTTACCCGTTGGGGCGGCCAGCTCCT‑GCAACTGTTCGGCGTCCATGCTGAAGAGTGGGGtt < 2:133911/249‑1 (MQ=255) atgggTGTATGATTCGCGACTCTTGTTTCAAACCTTCTGAGTTCAGAGGCTACATTCATGGCATGGCAGCAATTCAAACACGCCTGGTTGATTAAATTCTGGGCCCCCATCCCTGCGGTCATCGCGGCGGGTATTCTCTCTACTTACTA‑TTTTGGCATTACTGGCACCTTTTGGGCTG‑TCACGGGTGAATTTACCCGTTGGGGCGGCCAGCTCCT‑GCAACTGTTCGGCGTCCATGCTGAAGAGTGGGGtt < 2:288984/247‑1 (MQ=255) gtgtATGATTCGCGACTCTTGTTTCAAACCTTCTGAGTTCAGAGGCTACATTCATGTCATGGCAGCAATTCAAACACGCCTGGTTGATTAAATTCTGGGCCCCCATCCCTGCGGTCATCGCGGCGGGGATTTTCTCTCCTTTCTA‑TTTTTGCATTTCTGGCCCCCTTTGGGCTG‑TCACGGGTGGAATTACCCGTTTGGGCGGGCCGCCCCT‑GCCACTGGTTCGCGTCCCTGCTGCAGCGGGGGGTCACtt > 2:261645/1‑250 (MQ=255) tgtATGATTCGCGACTCTTGTTTCAAACCTTCTGAGTTCAGAGGCTACATTCATGTCATGGCAGCAATTCAAACACGCCTGGTTGATTAAATTCTGGGCCCCCATCCCTGCGGTCATCGCGGCGGGTATTCTCTCTACTTACTA‑TTTTGGCATTACTGGCACCTTTTGGGCTG‑TCACGGGTGAATTTACCCGTTGGGGCGGCCAGCTCCT‑GCAACTGTTCGGCGTCCATGCTGAAGAGTGGGGTTACttt < 1:600725/250‑1 (MQ=255) gtATGATTCGCGACTCTTGTTTCAAACCTTCTGAGTTCAGAGGCTACATTCATGTCATGGCAGCAATTCAAACACGCCTGGTTGATTAAATTCTGGGCCCCCATCCCTGCGGTCATCGCGGCGGGGATTTTCTCTTCCTACTA‑TTTTTGCATTACTGGCACCTTTTTGGCTT‑TCACGGGGGAATTTTACCGTTGGGGCGGCCAGCTCCT‑GCCACTGTTTGGCGTCCATGCTGAAGAGTGGGGTTTCttt > 1:553989/1‑249 (MQ=255) aTTCGCGACTCTTGTTTCAAACCTTCTGAGTTCAGAGGCTACATTCATGTCATGGCAGCAATTCAAACACGCCTGGTTGATTAAATTCTGGGCCCCCATCCCTGCGGTCATCGCGGCGGGTATTCTCTCTACTTACTA‑TTTTGGCATTACTGGCACCTTTTGGGCTG‑TCACGGGTGAATTTACCCGTTGGGGCGGCCAGCTCCT‑GCAACTGTTCGGCGTCCATGCTGAAGAGTGGGGTTACTTTAAAAtt < 1:634836/250‑1 (MQ=255) cgcgACTCTTGTTTCAAACCTTCTGAGTTCAGAGGCTACATTCATGTCATGGCAGCAATTCAAACACGCCTGGTTGATTAAATTCTGGGCCCCCATCCCTGCGGTCATCGCGGCGGGGATTCTCTCTCCTTACTA‑TTTTGTCCTTACTGTCACCCTTTGGGCTG‑TCTCGGGTGAAATTACCCCGTGGGGCGGCCCTCCCCT‑CCATCTGTTCTGCTTCCCTTCTGCAGAGTGTGGTGACTTTtaaagtttc > 2:152242/1‑245 (MQ=255) ctctTGTTTCAAACCTTCTGAGTTCAGAGGCTACATTCATGTCATGGCAGCAATTCAAACACGCCTGGTTGATTAAATTCTGGGCCCCCATCCCTGCGGTCATCGCGGCGGGTATTTTCTCTACTTACTA‑TTTTTGCATTACTGGCACCTTTTGGGCTT‑TCACGGGTGAATTTACCCGTTGGGGCGGCCAGCTCCT‑GCAACTGTTCGGCGTCCATGCTGAAGAGTGGGGTTACTTTTAAATTATCCATCt > 1:179797/1‑250 (MQ=255) tctTGTTTCAAACCTTCTGAGTTCAGAGGCTACATTCATGTCATGGCAGCAATTCAAACACGCCTGGTTGATTAAATTCTGGGCCCCCATCCCTGCGGTCATCGCGGCGGGGATTTTCTCTACTTACTA‑TTTTGGCCTTACTGGCACCCTTTTGGCTT‑TCACGGGGTAATTTTCCCGTTGGGGCGGCCAGCTCCT‑GCAACTGTTCGGCGGCCCTTCTTGAGAGGGGGGGTACTTTTAAATTATCCCTCTg > 2:187315/1‑250 (MQ=255) ttGTTTCAAACCTTCTGAGTTCAGAGGCTACATTCATGTCATGGCAGCAATTCAAACACGCCTGGTTGATTAAATTCTGGGCCCCCATCCCTGCGGTCATCGCGGCGGGGTTTTTCTCTACTTACTC‑TTTTTGCATTACTGGCACCCTTTTGGCTG‑TCTCGGGTGGATTTACCCGTTTGGGCGGCCAGCTCCT‑GCCACTGTTTGGGGTCCACGCTGGAGAGTGGGGTTACTTTTAAATTTTCCATCTgg > 2:500598/1‑249 (MQ=255) tttCAAACCTTCTGAGTTCAGAGGCTACATTCATGTCATGGCAGCAATTCAAACACGCCTGGTTGATTAAATTCTGGGCCCCCATCCCTGCGGTCATCGCGGCGGGGTATATTTCTTCTTTCCC‑TTTTTGCGTTACTTGCACCCCTTGGGGTT‑GCCCGGGGGGATTTACCCCTTGGGGCGGCCAGCCCCTCCCACCTGTTC‑GCGGCCCTGCTGATGGGGGGGGGTTCCTTACAAATATTCCTCTGGGAgg > 2:384072/1‑250 (MQ=255) cAAACCTTCTGAGTTCAGAGGCTACATTCATGTCATGGCAGCAATTCAAACACGCCTGGTTGATTAAATTCTGGGCCCCCATCCCTGCGGTCATCGCGGCGGGTATTCTCTCTACTTACTA‑TTTTGGCATTACTGGCACCTTTTGGGCTG‑TCACGGGTGAATTTACCCGGTGGGGCGGCCAGCTCCT‑GCAACTGTTCGGCGTCCATGCTGAAGAGTGGGGTTACTTTAAAATTATCCATCTGGAAGGAt < 2:501985/249‑1 (MQ=255) aaaCCTTCTGAGTTCAGAGGCTACATTCATGTCATGGCAGCAATTCAAACACGCCTGGTTGATTAAATTCTGGGCCCCCATCCCTGCGGTCATCGCGGCGGGTATTTTCTCTACTTCCTC‑TTTTTGCATTACTGGCACCTTTTTGGCTG‑TCACGGGGGAATTTATCCGTTGGGGCGGCCAGCTCCT‑GCAACCGTTCGGCGTCCCTGCTGCAGAGTGGGGGTACTTTTAAATTCTCCATCTTGAAGGATCg > 1:469676/1‑250 (MQ=255) ccTTCTGAGTTCAGAGGCTACATTCATGTCATGGCAGCAATTCAAACACGCCTGGTTGATTAAATTCTGGGCCCCCATCCCTGCGGTCATCGCGGCGGGTATTCTCTCTACTTACTA‑TTTTGGCATTACTGGCACCTTTTGGGCTG‑TCACGGGTGAATTTACCCGTTGGGGCGGCCAGCTCCT‑GCAACTGTTCGGCGTCCATGCTGAAGAGTGGGGTTACTTTAAAATTATCCATCTGGAAGGATCGCCa < 2:30042/250‑1 (MQ=255) agagGCTACATTCATGTCATGGCAGCAATTCAAACACGCCTGGTTGATTAAATTCTGGGCCCCCATCCCTGCGGTCATCGCGGCGGGGATTCTCTCTTCTTACTA‑TTTTTGCATTACTGGCACCCTTTTGGCTG‑TCACGGGTGGATTTTCCCGTTTGGGCGGCCAGCTCCC‑TCCAATGTTCGGCGGCCATGCTGAAGAGTGGGGGTTCTTTTAAATTTTCCCTCTTGAAGGGTCGCCATTTAAccccctc > 2:60240/1‑246 (MQ=255) tcatgGCAGCAATTCAAACACGCCTGGTTGATTAAATTCTGGGCCCCCATCCCTGCGGTCATCGCGGCGGGTATTCTCTCTACTTACTA‑TTTTGGCATTACTGGCACCTTTTGGGCTG‑TCACGGGTGAATTTACCCGTTGGGGCGGCCAGCTCCT‑GCAACTGTTCGGCGTCCATGCTGAAGAGTGGGGTTACTTTAAAATTATCCATCTGGAAGGATCGCCA‑TTAACCCGCATCGACGGGATGATGATc < 1:626235/249‑1 (MQ=255) cAAACCCGCCTGGTTGATTAAATTCTGGGCCCCCATCCCTGCGGTCATCGCGGCGGGTATTCTCTCTACATCCTA‑TTTTCGCATTACTGGCACCTTTTGGGCTG‑TCACGGGTGAATTTACCCGTTGGGGCGGCCAGCTCCT‑GCAACTGTTCGGCGTCCATGCTGAAGAGTGGGGTTACTTTAAAATTATCCATCTGGAAGCATCGCCA‑TTAACCCGCATCGACGGGATGATGATCCTCGGTATGTTTgg < 1:178947/249‑1 (MQ=255) aaCACGCCTGGTTGATTAAATTCTGGGCCCCCATCCCTGCGGTCATCGCGGCGGGTATTCTCTCTACTTACTA‑TTTTGGCATTACTGGCACCTTTTGGGCTG‑TCACGGGTGAATTTACCCGTTGGGGCGGCCAGCTCCT‑GCAACTGTTCGGCGTCCATGCTGAAGAGTGGGGTTACTTTAAAATTATCCATCTGGAAGGATCGCCA‑TTAACCCGCATCGACGGGATGATGATCCTCGGTATGTTTggcgg < 1:147978/250‑1 (MQ=255) acGCCTGGTTGATTAAATTCTGGGCCCCCATCCCTGCGGTCATCGCGGCGGGGATTTTCTCTACTTACCA‑TTTTTGCATTACTGGCACCCTTTTGGGTG‑TCACGGGGGAATTTTCCCGTTGGGGGGGCCAGCTCCT‑GCAACTGTTCGGCGTCCATGGTGAAGAGGGGGGGTACTTTTAAATTATCCATCTGGAAGGATCGCCA‑TTAACCCGCCTCGCAGGGAGGTTGATCCCCGGGATGTTTGGGGgctg > 2:108048/1‑250 (MQ=255) ggTTGATTAAATTCTGGGCCCCCATCCCTGCGGTCATCGCGGCGGGGATTCTCTCTACTTACTA‑TTTTGGCATTACTGGCACCTTTTGGGCTG‑TCACGGGTGAATTTACCCGTTGGGGCGGCCAGCTCCT‑GCAACTGTTCGGCGGCCATGCTGAAGAGTGGGGTTACTTTAAAATTATCCATCTGGAAGGATCGCCA‑TTAACCCGCATCGACGGGGTGATGATCCTCGGTATGTTTGGCGGCTGCTTTGc > 1:280706/1‑250 (MQ=255) cATCCCTGCGGTCATCGCGGCGGGGATTCTCTCTAATTACTA‑TTTTGGCATTACTGGCACCTTTTGGGCTG‑TCACGGGGGAATTTACCCGTTGGGGGGGCCAGCTCCT‑GCAACTGTTCGGCGTCCATGCTGAAGAGTGGGGGTACTTTAAAATTATCCATCTGGAAGGATCGCCA‑TTAAACCGCATCGACGGGGTGATGATCCTCGGGATGTTTGGCGGCTGCTTTGCCGCCGCGCTGGGGGCCAACAAt > 1:559426/1‑250 (MQ=255) cggGTATTCTCTCTACTTACTA‑TTTTGGCATTACTGGCACCTTTTGGGCTG‑TCACGGGTGAATTTACCCGTTGGGGCGGCCAGCTCCT‑GCAACTGTTCGGCGTCCATGCTGAAGAGTGGGGTTACTTTAAAATTATCCATCTGGAAGGATCGCCA‑TTAACCCGCATCGACGGGATGATGATCCTCGTTATGTTTGGCGGCTGCTTTGCCGCAGCGCTGTGGGCCAACAATGTCAAACTGCGAATGCcgcg > 1:378056/1‑250 (MQ=255) gggTATTCTCTCTACTTACTA‑TTTTGGCATTACTGGCACCTTTTGGGCTG‑TCACGGGTGAATTTACCCGTTGGGGCGGCCAGCTCCT‑GCAACTGTTCGGCGTCCATGCTGAAGAGTGGGGTTACTTTAAAATTATCCATCTGGAAGGATCGCCA‑TTAACCCGCATCGACGGGATGATGATCCTCGGTATGTTTGGCGGCTGCTTTGCCGCAGCGCTGTGGGCCAACAATGTCAAACTGCGAATGCCgcgc < 2:412062/250‑1 (MQ=255) ttCTCTCTACTTACTA‑TTTTGGCATTACTGGCTCCTTTTGGGCTG‑TCACGGGTGAATTTACCCGTTGGGGCGGCCAGCTCCT‑GCAACTGTTCGGCGTCCATGCTGAAGAGTGGGGTTACTTTAAAATTATCCATCTGGAAGGATCGCCA‑TTAACCCGCATCGACGGGATGATGATCCTCGGTATGTTTGGCGGCTGCTTTGCCGCAGCGCTGTGGGCCAACAATGTCAAACTGCGAATGCCGCGCAGcc < 1:151814/249‑1 (MQ=255) ctctctACTTACTA‑TTTTGGCATTACTGGCACCTTTTGGGCTG‑TCACGGGTGAATTTACCCGTTGGGGCGGCCAGCTCCT‑GCAACTGTTCGGCGTCCATGCTGAAGAGTGGGGTTACTTTAAAATTATCCATCTGGAAGGATCGCCA‑TTAACCCGCATCGACGGGATGATGATCCTCGGTATGTTTGGCGGCTGCTTTGCCGCAGCGCTGTGGGCCAACAATGTCAAACTGCGAATGCCGCGCAGCCGTa > 2:556270/1‑250 (MQ=255) acttactA‑TTTTGGCATTACTGGCACCTTTTGGGCTG‑TCACGGGTGAATTTACCCGTTGGGGCGGCCAGCTCCT‑GCAACTGTTCGGCGTCCATGCTGAAGAGTGGGGTTACTTTAAAATTATCCATCTGGAAGGATCGCCA‑TTAACCCGCATCGACGGGATGATGATCCTCGGTATGTTTGGCGGCTGCTTTGCCGCAGCGCTGTGGGCCAACAATGTCAAACTGCGAATGCCGCGCAGCCGTCTCCGCa > 2:211382/1‑250 (MQ=255) ttactA‑TTTTGGCATTACTGGCACCTTTTGGGCTG‑TCACGGGTGAATTTACCCGTTGGGGCGGCCAGCTCCT‑GCAACTGTTCGGCGTCCATGCTGAAGAGTGGGGTTACTTTAAAATTATCCATCTGGAAGGATCGCCA‑TTAACCCGCATCGACGGGATGATGATCCTCGGTATGTTTGGCGGCTGCTTTGCCGCAGCGCTGTGGGCCAACAATGTCAAACTGCGAATGCCGCGCAGCCGTATCCGCAt > 1:167986/1‑249 (MQ=255) ctA‑TTTTGGCATTACTGGCACCTGTTGGGCTG‑TCACGGGTGAATTTTCCCGTTGGGGCGGCCAGCTCCG‑GCAACTGTTCGGCGTCCATGCTGAAGAGTGGGGTTACTTTAAAATTATCCATCTGGAAGGATCGCCA‑TTAACCCGCATCGACGGGATGATGATCCTCGTTATGTTTGGCGGCTGCTTTGCCGCAGCGCTGTGGGCCAACAATGTCAAACTGCGAATGCCGCGCAGCCGTATCCGCATTATg < 1:192826/250‑1 (MQ=255) ctA‑TTTGGGCATTACTGGCTCCTTTTGGGCTG‑TCCCGGGTGAATTTACCCGTTGGGGCGGCCAGCTCCT‑GCAACTGTTCGGCGTCCATGCTGAAGAGTGTGGTTACTTTAAAATTATCCATCGGGAAGGATCGCCA‑TTAACCCGCATCGACGGGATGATGATCCTCGGTATGTTTGGCGGCTGCTTTGCCGCAGCGCTGTGGGCCAACAATGTCAAACTGCGAATGCCGCGCAGCCGTATCCGCATTAt < 2:562481/249‑1 (MQ=255) ttttGGCATTACTGGCGCCTTTTGGGCTG‑TCACGGGTGAATTTACCCGTTGGGGCGGCCAGCTCCT‑GCAACTGTTCGGCGTCCATGCTGAAGAGTGGGGTTACTTTAAAATTATCCATCTGGAAGGATCGCCA‑TTAACCCGCATCGACGGGATGATGATCCTCGGTATGTTTGGCGGCTGCTTTGCCGCAGCGCTGTGGGCCAACAATGTCAAACTGCAAATGCCGCGCAGCCGTATCCGCATTATGc < 1:229561/248‑1 (MQ=255) ttttGGCATTACTGGCACCTTTTGGGCTG‑TCACGGGTGAATTTACCCGTTGGGGCGGCCAGCTCCT‑GCAACTGTTCGGCGTCCATGCTGAAGAGTGGGGTTACTTTAAAATTATCCATCTGGAAGGATCGCCA‑TTAACCCGCATCGACGGGATGATGATCCTCGGTATGTTTGGCGGCTGCTTTGCCGCAGCGCTGTGGGCCAACAATGTCAAACTGCGAATGCCGCGCAGCCGTATCCGCATTATGCa < 2:553989/249‑1 (MQ=255) tttGGCATTACTGGCACCTTTTGGGCTG‑TCACGGGTGAATTTACCCGTTGGGGCGGCCAGCTCCT‑GCAACTGTTCGGCGTCCATGCTGAAGAGTGGGGTTACTTTAAAATTATCCATCTGGAAGGATCGCCA‑TTAACCCGCATCGACGGGATGATGATCCTCGGTATGTTTGGCGGCTGCTTTGCCGCAGCGCTGTGGGCCAACAATGTCAAACTGCGAATGCCGCGCAGCCGTATCCGCATTATGCAgg > 2:37153/1‑250 (MQ=255) | ATTAAAGCCCTGATGTCGCCAGCCTTTCAAGGTTCAGAGAGAAATTTGATCTAACTATTATTTTTGTGAATTATTACCCCGAAAATAAATTTGCATGGTGTATGATTCGCGACTCTTGTTTCAAACCTTCTGAGTTCAGAGGCTACATTCATGTCATGGCAGCAATTCAAACACGCCTGGTTGATTAAATTCTGGGCCCCCATCCCTGCGGTCATCGCGGCGGGTATTCTCTCTACTTACTA‑TTTTGGCATTACTGGCACCTTTTGGGCTG‑TCACGGGTGAATTTACCCGTTGGGGCGGCCAGCTCCT‑GCAACTGTTCGGCGTCCATGCTGAAGAGTGGGGTTACTTTAAAATTATCCATCTGGAAGGATCGCCA‑TTAACCCGCATCGACGGGATGATGATCCTCGGTATGTTTGGCGGCTGCTTTGCCGCAGCGCTGTGGGCCAACAATGTCAAACTGCGAATGCCGCGCAGCCGTATCCGCATTATGCAGG > NZ_CP009273/2001608‑2002100 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |