Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NZ_CP0092734,091,4420GT38.3% 79.6 / 18.4 47intergenic (+84/‑176)sodA/kdgTsuperoxide dismutase [Mn]/2‑keto‑3‑deoxygluconate transporter
Reads supporting (aligned to +/- strand):  ref base G (5/24);  new base T (18/0);  total (23/24)
Fisher's exact test for biased strand distribution p-value = 7.37e-09
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00
Rejected as consensus: Frequency below/above cutoff threshold.

CTATTTCTGGCGCTTCCGGCTTCCCGATTATGGGCCTGGATGTGTGGGAACATGCTTACTACCTGAAATTCCAGAACCGCCGTCCGGACTACATTAAAGAGTTCTGGAACGTGGTGAACTGGGACGAAGCAG‑CGGCACGTTTTGCGGCGAAAAAATAATCATTTGCCGCCTGCTGCAATGAGGCGTATAGGCCGCATATCAGCTTAAAAAATGAACCATCGCCAACGGCGG‑T‑GGTTTTTTTGTGATCAATTTCAAAATAAAAACAATGATCCGATAAAAATAAAACAGCGTTTCAATTGA‑TGTGGTTTTGAT‑CACTTTTATTGATTAAATGAATGTCTATCTTCGTTTCCATCAACACTGATGCTCCATTGAGGAATTACGCATCAGCCCTTAAAAATATGCCGACAGGTGATGGAAATGCAGATAAAACGCTCGATTGAGAAAATCCCGGGGGGGATGATGCTCGTCCCGCTATTCCTTGGCGCA  >  NZ_CP009273/4091201‑4091686
                                                                                                                                                                                                                                                    |                                                                                                                                                                                                                                                      
cTATTTCTGGCGCTTCCGGCTTCCCGATTATGGGCCTGGATGTGTGGGAACATGCTTACTACCTGAAATTCCAGAACCGCCGTCCGGACTACATTAAAGAGTTCTGGAACGTGGTGAACTGGGACGAAGCAG‑CGGCACGTTTTGCGGCGAAAAAATAATCATTTGCCGCCTGCTGCAATGAGGCGTATAGGCCGCATATCAGCTTAAAAAATGAACCATCGCCAACGGCGG‑TCGGTTTTTTtttgtttat                                                                                                                                                                                                                                                 >  2:574469/1‑245 (MQ=255)
      cTGGCGCTTCCGGCTTCCCGATTATGGGCCTGGATGTGTGGGAACATGCTTCCTACCTGAAATTCCAGAACCGCCGTCCGGACTACATTAAAGAGTTCTGGAACGTGGTGAACTGGGACGAAGCAG‑CGGCACGTTTTGCGGCGAAAAAATAATCATTTGCCGCCTGCTGCAATGAGGCGTATAGGCCGCATATCAGCTTAAAAAATGAACCATCGCCAACGGCGG‑T‑GGTTTTTTTGTGATCAATTTCaa                                                                                                                                                                                                                                           <  2:569168/249‑1 (MQ=255)
         gcggTTCCGGCTTCCGGATTATGGGCCTGGATGTGTGGGAACATGCTTACTACCTGAAATTCCAGAACCGCCGTCCGGACTACATTAAAGAGTTCTGGAACGTGGTGAACTGGGACGAAGCAG‑CGGCACGTTTTGCGGCGAAAAAATAATCATTTGCCGCCTGCTGCAATGAGGCGTATAGGCCGCATATCAGCTTAAAAAATGAACCATCGCCAACGGCGG‑T‑GGTTTTTTTGTGATCAATTTCaaa                                                                                                                                                                                                                                          <  2:460204/247‑1 (MQ=255)
           gcTTCCGGCTTCCCGATTATGGGCCTGGATGTGTGGGAACATGCTTACTACCTGAAATTCCAGAACCGCCGTCCGGACTACATTAAAGAGTTCTGGAACGTGGTGAACTGGGACGAAGCAG‑CGGCACGTTTTGCGGCGAAAAAATAATCATTTGCCGCCTGCTGCAATGAGGCGTATAGGCCGCATATCAGCTTAAAAAATGAACCATCGCCAACGGCGG‑T‑GGTTTTTTTGTGATCAATTTCAAAATaaa                                                                                                                                                                                                                                     <  1:161402/250‑1 (MQ=255)
             ttCCGGCTTCCCGATTATGGGCCTGGATGTGTGGGAACATGCTTACTACCTGAAATTCCAGAACCGCCGTCCGGACTACATTAAAGAGTTCTGGAACGTGGTGAACTGGGACGAAGCAG‑CGGCACGTTTTGCGGCGAAAAAATAATCATTTGCCGCCTGCTGCAATGAGGCGTATAGGCCGCATATCAGCTTAAAAAATGAACCATCGCCAACGGCGG‑T‑GGGTTTTTTTTGGTTAAATTTAaaaaaaaa                                                                                                                                                                                                                                    >  2:238296/1‑249 (MQ=255)
                 ggCTTCCCGATTATGGGCCTGGATGTGTGGGAACATGCTTACTACCTGAAATTCCAGAACCGCCGTCCGGACTACATTAAAGAGTTCTGGAACGTGGTGAACTGGGACGAAGCAG‑CGGCACGTTTTGCGGCGAAAAAATAATCATTTGCCGCCTGCTGCAATGAGGCGTATAGGCCGCATATCAGCTTAAAAAATGAACCATCGCCAACGGCGG‑T‑GGGTTTTTTGTGATCAATTTTCAAATaaaaaaaa                                                                                                                                                                                                                                >  2:268957/1‑249 (MQ=255)
                    ttCCCGATTATGGGCCTGGATGTGTGGGAACATGCTTACTACCTGAAATTCCAGAACCGCCGTCCGGACTACATTAAAGAGTTCTGGAACGTGGTGAACTGGGACGAAGCAG‑CGGCACGTTTTGCGGCGAAAAAATAATCATTTGCCGCCTGCTGCAATGAGGCGTATAGGCCGCATATCAGCTTAAAAAATGAACCATCGCCAACGGCGGCG‑GGTTTTTTTTTGGCAAATTACAAAATaaaaaaaaaaa                                                                                                                                                                                                                             >  2:516781/1‑247 (MQ=255)
                       ccGATTATGGGCCTGGATGTGTGGGAACATGCTTACTACCTGAAATTCCAGAACCGCCGTCCGGACTACATTAAAGAGTTCTGGAACGTGGTGAACTGGGACGAAGCAG‑CGGCACGTTTTGCGGCGAAAAAATAATCATTTGCCGCCTGCTGCAATGAGGCGTATAGGCCGCATATCAGCTTAAAAAATGAACCATCGCCAACGGCGG‑T‑GGGTTTTTTTTGATCAATTTTAAAATaaataggaagagga                                                                                                                                                                                                                          >  1:220651/1‑238 (MQ=255)
                        cGATTATGGGCCTGGATGTGTGGGAACATGCTTACTACCTGAAATTCCAGAACCGCCGTCCGGACTACATTAAAGAGTTCTGGAACGTGGTGAACTGGGACGAAGCAG‑CGGCACGTTTTGCGGCGAAAAAATAATCATTTGCCGCCTGCTGCAATGAGGCGTATAGGCCGCATATCAGCTTAAAAAATGAACCATCGCCAACGGCGG‑T‑GGTTTTTTTTTGGTTAATTTCAAAATATaaaaaaaaattcc                                                                                                                                                                                                                         >  1:171969/1‑242 (MQ=255)
                        cGATTATGGGCCTGGATGTGTGGGAACATGCTTACTACCTGAAATTCCAGAACCGCCGTCCGGACTACATTAAAGAGTTCTGGAACGTGGTGAACTGGGACGAAGCAG‑CGGCACGTTTTGCGGCGAAAAAATAATCATTTGCCGCCTGCTGCAATGAGGCGTATAGGCCGCATATCAGCTTAAAAAATGAACCATCGCCAACGGCGG‑T‑GGTTTTTTTGTGATCAATTTCAAAAt                                                                                                                                                                                                                                        <  2:220651/234‑1 (MQ=255)
                              tGGGCCTGGATGTGTGGGAACATGCTTACTACCTGAAATTCCAGAACCGCCGTCCGGACTACATTAAAGAGTTCTGGAACGTGGTGAACTGGGACGAAGCAG‑CGGCACGTTTTGCGGCGAAAAAATAATCATTTGCCGCCTGCTGCAATGAGGCGTATAGGCCGCATATCAGCTTAAAAAATGAACCATCGCCAACGGCGG‑T‑GGTTTTTTTGTGATCAATTTCAAAATAAAAACAATGATCCGataaaaa                                                                                                                                                                                                                  <  2:311196/250‑1 (MQ=255)
                                      gATGTGTGGGAACATGCTTACTACCTGAAATTCCAGAACCGCCGTCCGGACTACATTAAAGAGTTCTGGAACGTGGTGAACTGGGACGAAGCAG‑CGGCACGTTTTGCGGCGAAAAAATAATCATTTGCCGCCTGCTGCAATGAGGCGTATAGGCCGCATATCAGCTTAAAAAATGAACCATCGCCAACGGCGG‑T‑GGTTTTTTTGTGATCAATTTCAAAATAAAAACAATGATCCGATAAAAATAAAACAg                                                                                                                                                                                                          <  2:282331/250‑1 (MQ=255)
                                        tgtgtgGGAACATGCTTACTACCTGAAATTCCAGAACCGCCGTCCGGACTACATTAAAGAGTTCTGGAACGTGGTGAACTGGGACGAAGCAG‑CGGCACGTTTTGCGGCGAAAAAATAATCATTTGCCGCCTGCTGCAATGAGGCGTATAGGCCGCATATCAGCTTAAAAAATGAACCATCGCCAACGGCGG‑T‑GGTTTTTTTTTGATCAATTTCCAAATTAAAACAATGAACCGaaaaaaataaaaaaacg                                                                                                                                                                                                        >  1:215514/1‑245 (MQ=255)
                                                 aCATGCTTACTACCTGAAATTCCAGAACCGCCGTCCGGACTACATTAAAGAGTTCTGGAACGTGGTGAACTGGGACGAAGCAG‑CGGCACGTTTTGCGGCGAAAAAATAATCATTTGCCGCCTGCTGCAATGAGGCGTATAGGCCGCATATCAGCTTAAAAAGTGAACCATCGCCAACGGCGG‑T‑GGGTTTTTTTTGATCCATTTTAAAATAAAAAAAAAAATCCGATAAAAAAAAAAAAACGTTTTAAtt                                                                                                                                                                                                >  1:136511/1‑249 (MQ=255)
                                                 aCATGCTTACTACCTGAAATTCCAGAACCGCCGTCCGGACTACATTAAAGAGTTCTGGAACGTGGTGAACTGGGACGAAGCAG‑CGGCACGTTTTGCGGCGAAAAAATAATCATTTGCCGCCTGCTGCAATGAGGCGTATAGGCCGCATATCAGCTTAAAAAATGAACCATCGCCAACGGCGG‑T‑GGTTTTTTTGTGATCAATTTCAAAATAAAAACAATGATCCGATAAAAATAAAACAGCGTTTCAATTg                                                                                                                                                                                               <  2:273287/250‑1 (MQ=255)
                                                             catGAAATTCCAGAACCGCCGTCCGGACTACATTAAAGAGTTCTGGAACGTGGTGAACTGGGACGAAGCAG‑CGGCACGTTTTGCGGCGAAAAAATAATCATTTGCCGCCTGCTGCAATGAGGCGTATAGGCCGCATATCAGCTTAAAAAATGAACCATCGCCAACGGCGG‑T‑GGTTTTTTTGTGATCAATTTCAAAATAAAAACAATGATCCGATAAAAATAAAACAGCGTTTCAATTGA‑TGTGGtttt                                                                                                                                                                                    <  2:420256/246‑1 (MQ=255)
                                                                 aaaTTCCAGAACCGCCGTCCGGACTACATTAAAGAGTTCTGGAACGTGGTGAACTGGGACGAAGCAG‑CGGCACGTTTTGCGGCGAAAAAATAATCATTTGCCGCCTGCTGCAATGAGGCGTATAGGCCGCATATCAGCTTAAAAAATGAACCATCGCCAACGGCGG‑T‑GGTTTTTTTGTGATCAATTTCAAAATAAAAACAATGATCCGATAAAAATAAAACAGCGTTTCAATTGA‑TGTGGTTTTGAT‑Ca                                                                                                                                                                              <  1:509196/249‑1 (MQ=255)
                                                                      ccAGAACCGCCGTCCGGACTACATTAAAGAGTTCTGGAACGTGGTGAACTGGGACGAAGCAG‑CGGCACGTTTTGCGGCGAAAAAATAATCATTTGCCGCCTGCTGCAATGAGGCGTATAGGCCGCATATCAGCTTAAAAAATGAACCATCGCCAACGGCGG‑T‑GGTGTTTTTTTGTCTAAATTCTAAAAAAAAAAAATAAATCGAGTAAAAAAAAACAACGCTTCGATTGT‑TGTTGTGTTGATACACtttt                                                                                                                                                                         >  2:74313/1‑250 (MQ=255)
                                                                        aGAACCGCCGTCCGGACTACATTAAAGAGTTCTGGAACGTGGTGAACTGGGACGAAGCAG‑CGGCACGTTTTGCGGCGAAAAAATAATCATTTGCCGCCTGCTGCAATGAGGCGTATAGGCCGCATATCAGCTTAAAAAATGAACCATCGCCAACGGCGG‑T‑GGGTTTTTTGTGGTCAATTTCTAAATAAAAAAAATGATCCGATAAAAATAAAAAAGCGTTTTAATTGT‑TGTGGTTTTGAT‑CACTTTTAtt                                                                                                                                                                      >  1:460884/1‑250 (MQ=255)
                                                                           aCCGCCGTCCGGACTACATTAAAGAGTTCTGGAACGTGGTGAACTGGGACGAAGCAG‑CGGCACGTTTTGCGGCGAAAAAATAATCATTTGCCGCCTGCTGCAATGAGGCGTATAGGCCGCATATCAGCTTAAAAAATGAACCATCGCCAACGGCGG‑T‑GGGTTTTTTTTGGTTAAATTTAAAATAAAAAAAAAGATACGATAAAAAAAAAAAAGCGATTCAATTTA‑TGTGGTTTTGAT‑CACTTTTTTTTAt                                                                                                                                                                   >  1:466012/1‑250 (MQ=255)
                                                                                 gTCCGGACTACATTAAAGAGTTCTGGAACGTGGTGAACTGGGACGAAGCAG‑CGGCACGTTTTGCGGCGAAAAAATAATCATTTGCCGCCTGCTGCAATGAGGCGTATAGGCCGCATATCAGCTTAAAAAATGAACCATCGCCAACGGCGG‑T‑GGGTTTTTTGTGATCAATTTCAAAATAAAAACAATGATCCGATAAAAATAAAACAGCGTTTCAATTGA‑TGTGGGTTTGAT‑TACTTTTATTGATTTaat                                                                                                                                                              >  1:74396/1‑249 (MQ=255)
                                                                                   ccGGACTACATTAAAGAGTTCTGGAACGTGGTGAACTGGGACGAAGCAG‑CGGCACGTTTTGCGGCGAAAAAATAATCATTTGCCGCCTGCTGCAATGAGGCGTATAGGCCGCATATCAGCTTAAAAAATGAACCATCGCCAACGGCGG‑T‑GGGTTTTTTTTTATCAATTTTCAAAAAAAAAAAAAGAACCGATAAAAATAAAACAACATTTCAATTTA‑TTTGGTTTTGAT‑CACCTTTATTGTTtaaataaa                                                                                                                                                           >  2:209912/1‑250 (MQ=255)
                                                                                   ccGGACTACATTAAAGAGTTCTGGAACGTGGTGAACTGGGACGAAGCAG‑CGGCACGTTTTGCGGCGAAAAAATAATCATTTGCCGCCTGCTGCAATGAGGCGTATAGGCCGCATATCAGCTTAAAAAATGAACCATCGCCAACGGCGG‑T‑GGGTTTTTTTTGGTCAATTTTAAAAAAAAAACAAAGATCCGATAAAAAAAAAAAAACGTTTTAATTTA‑TGTGGGTTTGTT‑TACTTTTTTTGATTAaatgaa                                                                                                                                                           >  1:142676/1‑250 (MQ=255)
                                                                                                aaGAGTTCTGGAACGTGGTGAACTGGGACGAAGCAG‑CGGCACGTTTTGCGGCGAAAAAATAATCATTTGCCGCCTGCTGCAATGAGGCGTATAGGCCGCATATCAGCTTAAAAAATGAACCATCGCCAACGGCGG‑T‑GGTTTTTTTGTGATCAATTTCAAAATAAAAACAATGATCCGATAAAAATAAAACAGCGTTTCAATTGA‑TGTGGTTTTGAT‑CACTTTTATTGATTAAATGAATGTCTATCTTCGt                                                                                                                                              <  2:61476/250‑1 (MQ=255)
                                                                                                   agTTCTGGAACATAGTGAACTGAGACGAAGCAG‑TAGCACGTTTTTCGGCTAAAAAATAATCATTTGCCGCCTGCTGCAATGAGGCTTATAGGCCACATATCAGCTTAAAAAATGAACCATCGCCAACGGCGG‑T‑GGTTTTGTTGTGATCAATTTCAAAATAAAAACAATGATCCGATAAAAATAAAACAGCATTTCAATGGA‑TATAGTTTTGAT‑CACTTTTATTGATTAAATGAATGTCTATCTTCGTTTc                                                                                                                                           <  1:388062/250‑1 (MQ=255)
                                                                                                       cTGGAACGTGGTGAACTGGGACGAAGCAG‑CGGCACGTTTTGCGGCGAAAAAATAATCATTTGCCGCCTGCTGCAATGAGGCGTATAGGCCGCATATCAGCTTAAAAAATGAACCATCGCCAACGGCGG‑T‑GGGTTTTTTTTGTTCAATTTTAAAATAAAAAAAAAGATCCGCTAAAAAAAAAAAACAGTTTCAATTTATTGTGGTTTT‑TT‑CACTTTTATTTATTAAATTAATGTATATTTTTGTTTCTATc                                                                                                                                       >  2:547008/1‑250 (MQ=255)
                                                                                                                      cTGGGACG‑AGCAGCCGCCACTTTTGCCGGCAAAAAAATATCCATTT‑CCCCCTGCTTCCATTAAGGCTATAAGGCCCCTTTCAACTTTAAAAAAGAACCATCCCCAACCGCGGTT‑GTTTTTTTTGTGATCAATTTCAAAATAAAAACAATGATCCGATAAAAATAAAACAGCGTTTCAATTGA‑TGTGGTTTTGAT‑CACTTTTATTGATTAAATGAATGTCTATCTTCGTTTCCATCAACACTGATGCTCCa                                                                                                                        <  1:409150/250‑1 (MQ=255)
                                                                                                                         ggACGAAGCAG‑CGGCACGTTTTGCGGCGAAAAAATAATCATTTGCCGCCTGCTGCAATGAGGCGTATAGGCCGCATATCAGCTTAAAAAATGAACCATCGCCAACGGCGG‑T‑GGTTTTTTTGTGATCAATTTCAAAATAAAAACAATGATCCGATAAAAATAAAACAGCGTTTCAATTGA‑TGTGGTTTTGAT‑CACTTTTATTGATTAAATGAATGTCTATCTTCGTTTCCATCAACACTGATGCTCCATTg                                                                                                                     <  1:238296/250‑1 (MQ=255)
                                                                                                                                  ag‑cGGCACGTTTTGCGGCGAAAAAATAATCATTTGCCGCCTGCTGCAATGAGGCGTATAGGCCGCATATCAGCTTAAAAAATGAACCATCGCCAACGGCGG‑T‑GGGTTTTTTTTGGTCAATTTTAAAAAAAAAAAAAAAAACCGATAAAAAAAAAAAAGCGGTTTAATTGT‑TGTGGGTTTTTT‑TACTTTTTTTGATTTAAAGAATGTCTATCTTCGTTTCCATCCACAATGATTCTCCCTTTAAGAAATAc                                                                                                            >  2:644252/1‑250 (MQ=255)
                                                                                                                                     cGGCACGTTTTGCGGCGAAAAAATAATCATTTGCCGCCTGCTGCAATGAGGCGTATAGGCCGCATATCAGCTTAAAAAATGAACCATCGCCAACGGCGG‑T‑GGTTTTTTTGTGATCAATTTCAAAATAAAAACAATGATCCGATAAAAATAAAACAGCGTTTCAATTGA‑TGTGGTTTTGAT‑CACTTTTATTGATTAAATGAATGTCTATCTTCGTTTCCATCAACACTGATGCTCCATTGAGGAATTACGc                                                                                                          <  2:633623/250‑1 (MQ=255)
                                                                                                                                         aCGTTTTGCGGCGAAAAAATAATCATTTGCCGCCTGCTGCAATGAGGCGTATAGGCCGCATATCAGCTTAAAAAATGAACCATCGCCAACGGCGG‑T‑GGGTTTTTTTTGATCAATTTTAAAAAAAAAACAAAGATACGATAAAAATAAAACAGCGTTTTAATTGA‑TGTGGGTTTTTT‑CACTTTTATTGATTAAATAAATGTCTATCTTTGTTTCTCTCAACACTTATGCTCCATTTAGGGATTACGCATc                                                                                                       >  2:15900/1‑249 (MQ=255)
                                                                                                                                            ttttGCGGCGAAAAAATAATCATTTGCCGCCTGCTGCAATGAGGCGTATAGGCCGCATATCAGCTTAAAAAATGAACCATCGCCAACGGCGG‑T‑GGTTTTTTTGTGATCAATTTCAAAATAAAAACAATGATCCGATAAAAATAAAACAGCGTTTCAATTGA‑TGTGGTTTTGAT‑CACTTTTATTGATTAAATGAATGTCTATCTTCGTTTCCATCAACACTGATGCTCCATTGAGGAATTACGCATCAGcc                                                                                                   <  1:92834/250‑1 (MQ=255)
                                                                                                                                                  ggcgAAAAAATAATCATTTGCCGCCTGCTGCAATGAGGCGTATAGGCCGCATATCAGCTTAAAAAATGAACCATCGCCAACGGCGG‑T‑GGGTTTTTTTTGATCAATTTCAAAAAAAAAAAAAAGATACGATAAAAAAAAAACAGCGTTTCAATTGA‑TGTGGGTTTGTT‑CACCTTTTTTGATTAAATGAAAGTTTATCTTCGTTTCCATCAACAATGATGATCCATTGAGGAATTACGCATCAGCCCTTaa                                                                                              >  2:453931/1‑249 (MQ=255)
                                                                                                                                                       aaaaaTAATCATTTGCCGCCTGCTGCAATGAGGCGTATAGGCCGCATATCAGCTTAAAAAATGAACCATCGCCAACGGCGG‑T‑GGTTTTTTTGTGATCAATTTCAAAATAAAAACAATGATCCGATAAAAATAAAACAGCGTTTCAATTGA‑TGTGGTTTTGAT‑CACTTTTATTGATTAAATGAATGTCTATCTTCGTTTCCATCAACACTGATGCTCCATTGAGGAATTACGCATCAGCCCTTAAAAatat                                                                                        <  2:67615/250‑1 (MQ=255)
                                                                                                                                                            taatCATTTGCCGCCTGCTGCAATGAGGCGTATAGGCCGCATATCAGCTTAAAAAATGAACCATCGCCAACGGCGG‑T‑GGGTTTTTTTTGTTCAATTTCAAAAAAAAAAAAATGATACGATAAAAAAAAAAAAGCGTTTCAATTGA‑TGTGGTTTTTAT‑CAATTTTATTGATTAAATGAATGTCTTTCTTCGTTTTTATCAACACTGATGCTCCATTGAGGGATTACGCATCAGCCCTTAAAAATATTCCGa                                                                                   >  2:481816/1‑250 (MQ=255)
                                                                                                                                                                 aTTTGCCGCCTGCTGCAATGAGGCGTATAGGCCGCATATCAGCTTAAAAAATGAACCATCGCCAACGGCGG‑T‑GGGTTTTTTTTGATCCATTTTAAAAAAAAAACAATGATCCCGTAAAAATAAAAAAACGTTTCAATTTA‑TGTGGTTTTTTT‑TACTTTTTTTTATTTAATTAATGTCTATCTTCGTTTTCTTTCACACTTGTTCTCCCTTTATGAATTACGCCACCACCCTTAAAAATATTCCGTCCGGt                                                                              >  2:567661/1‑250 (MQ=255)
                                                                                                                                                                             ctgcAATGAGGCGTATAGGCCGCATATCAGCTTAAAAAATGAACCATCGCCAACGGCGG‑T‑GGTTTTTTTGTGATCAATTTCAAAATAAAAACAATGATCCGATAAAAATAAAACAGCGTTTCAATTGA‑TGTGGTTTTGAT‑CACTTTTATTGATTAAATGAATGTCTATCTTCGTTTCCATCAACACTGATGCTCCATTGAGGAATTACGCATCAGCCCTTAAAAATATGCCGACAGGTGATGGAAATGc                                                                   <  2:613842/249‑1 (MQ=255)
                                                                                                                                                                             ctgcAATGAGGCGTATAGGCCGCATATCAGCTTAAAAAATGAACCATCGCCAACGGCGG‑T‑GGTTTTTTTGTGATCAATTTCAAAATAAAAACAATGATCCGATAAAAATAAAACAGCGTTTCAATTGA‑TGTGGTTTTGAT‑CACTTTTATTGATTAAATGAATGTCTATCTTCGTTTCCATCAACACTGATGCTCCATTGAGGAATTACGCATCAGCCCTTAAAAATATGCCGACAGGTGATGGAAATGCa                                                                  <  1:505468/250‑1 (MQ=255)
                                                                                                                                                                                cAATGAGGCGTATAGGCCGCATATCAGCTTAAAAAATGAACCATCGCCAACGGCGG‑T‑GGTTTTTTTGTGATCAATTTCAAAATAAAAACAATGATCCGATAAAAATAAAACAGCGTTTCAATTGA‑TGTGGTTTTGAT‑CACTTTTATTGATTAAATGAATGTCTATCTTCGTTTCCATCAACACTGATGCTCCATTGAGGAATTACGCATCAGCCCTTAAAAATATGCCGACAGGTGATGGAAATGCAGAt                                                               <  1:397653/250‑1 (MQ=255)
                                                                                                                                                                                              ggCCGCATATCAGCTTAAAAAATGAACCATCGCCAACGGCGG‑T‑GGTTTTTTTGTGATCAATTTCAAAATAAAAACAATGATCCGATAAAAATAAAACAGCGTTTCAATTGA‑TGTGGTTTTGAT‑CACTTTTATTGATTAAATGAATGTCTATCTTCGTTTCCATCAACACTGATGCTCCATTGAGGAATTACGCATCAGCCCTTAAAAATATGCCGACAGGTGATGGAAATGCAGATAAAACGCTCGAtt                                                  <  1:276143/249‑1 (MQ=255)
                                                                                                                                                                                                ccGCATATCAGCTTAAAAAATGAACCATCGCCAACGGCGG‑T‑GGGTTTTTTGTGATCAAATTCAAAATAAAAACAAAGAACCGATAAAAATAAAAAAACGGTTTAATTTG‑TTTGGGTTTTAT‑TCCTTTTTTTTATTAAAAGAATGTTTATCTTTGTTTTCATCAACACTGATGTCCCTTTGAGGAATTTAGCCTCAGCCCCTATAAATATTCCGTCAGGTGCTGGAAATGCAGCTAAAAACCTCGact                                                  >  2:129401/1‑245 (MQ=255)
                                                                                                                                                                                                 cGCATATCAGCTTAAAAAATGAACCATCGCCAACGGCGG‑T‑GGTTTTTTTTTTATCAATTTCAAAATAAAAACAAAGATCCGATAAAAATAAAACAACGTTTTAATTTA‑TGTGGGTTTGAT‑CACTTTTTTTTTTTAAAAGAATGTCTATCTTCGTTTTCATTAACACTGATGCTTCATTGTGGAATTACGCATCAACCCTTTAAACAATGCCGACACGGGATGGGAAAGGAGATAAAAAGccacgttgtg                                               >  2:56806/1‑240 (MQ=255)
                                                                                                                                                                                                 cGCATATCAGCTTAAAAAATGAACCATCGCCAACGGCGG‑T‑GGTTTATTTGTGATCAATTTCAAAATAAAAACAATGATCCGATAAAAATAAAACAGCGTTTCAATTGA‑TGTGGTTTTGAT‑CACTTTTATTGATTAAATGAATGTCTATCGTCGTTTCCATCAACACTGATGCTCCAGTGAGGAATTACGCATCAGCCCTTAAAAATATGCCGACAGGTGATGGAAATGCAGATAAAACGCTCGATTgaga                                              <  2:248079/250‑1 (MQ=255)
                                                                                                                                                                                                         aGCTTAAAAAATGAACCATCGCCAACGGCGG‑T‑GGTTTTTTTGTGATCAATTTCAAAATAAAAACAATGATCCGATAAAAATAAAACAGCGTTTCAATTGA‑TGTGGTTTTGAT‑CACTTTTATTGATTAAATGAATGTCTATCTTCGTTTCCATCAACACTGATGCTCCATTGAGGAATTACGCATCAGCCCTTAAAAATATGCCGACAGGTGATGGAAATGCAGATAAAACGCTCGATTGAGAAAATccc                                       <  2:175391/249‑1 (MQ=255)
                                                                                                                                                                                                           cTTAAAAAATGAACCATCGCCAACGGCGG‑T‑GGTTTTTTTTTGATCAATTTCAAAATAAAAACAATGATCCCATAAAAATAAAACAGCGTTTCAATTGA‑TGTGGTTTTGAT‑CACTTTTTTTTATTAAATGAATGTCTATTTTCGTTTTCATTAACACTGATGCTCCCTTGAGGAATTACGCATCAGCCCTTAAAAATATTCCGACAGGTGATGGAAATGCAGATAAAAAGCTCCATTGAGAAAATCACggg                                    >  1:434566/1‑250 (MQ=255)
                                                                                                                                                                                                               aaaaaTGAACCATCGCCAACGGCGG‑T‑GGTTTTTTTGTGATCAATTTCAAAATAAAAACAATGATCCGATAAAAATAAAACAGCGTTTCAATTGA‑TGTGGTTTTGAT‑CACTTTTATTGATTAAATGAATGTCTATCTTCGTTTCCATCAACACTGATGCTCCATTGAGGAATTACGCATCAGCCCTTAAAAATATGCCGACAGGTGATGGAAATGCAGATAAAACGCTCGATTGAGAAAATCCCggggggg                                <  1:3038/250‑1 (MQ=255)
                                                                                                                                                                                                                                     cgg‑T‑GGTTTTTTTGTGATCAATTTCAAAATAAAAACAATGATCCGATAAAAATAAAACAGCGTTTCAATTGA‑TGTGGTTTTGAT‑CACTTTTATTGATTAAATGAATGTCTATCTTCGTTTCCATCAACACTGATGCTCCATTGAGGAATTACGCATCAGCCCTTAAAAATATGCCGACAGGTGATGGAAATGCAGATAAAACGCTCGATTGAGAAGATCTCGGGGGGGATGATGCACGTCGCGCTATTcc          >  2:240373/1‑250 (MQ=255)
                                                                                                                                                                                                                                                ttttGTGATCAATTTCAAAATAAAAACAATGATCCGATAAAAATAAAACAGCGTTTCAATTGA‑TGTGGTTTTGAT‑CACTTTTATTGATTAAATGAATGTCTATCTTCGTTTCCATCAACACTGATGCTCCATTGAGGAATTACGCATCAGCCCTTAAAAATATGCCGACAGGTGATGGAAATGCAGATAAAACGCTCGATTGAGAAAATCCCGGGGGGGATGATGCTCGTCCCGCTATTCCTTGGCGCa  <  1:338563/249‑1 (MQ=255)
                                                                                                                                                                                                                                                    |                                                                                                                                                                                                                                                      
CTATTTCTGGCGCTTCCGGCTTCCCGATTATGGGCCTGGATGTGTGGGAACATGCTTACTACCTGAAATTCCAGAACCGCCGTCCGGACTACATTAAAGAGTTCTGGAACGTGGTGAACTGGGACGAAGCAG‑CGGCACGTTTTGCGGCGAAAAAATAATCATTTGCCGCCTGCTGCAATGAGGCGTATAGGCCGCATATCAGCTTAAAAAATGAACCATCGCCAACGGCGG‑T‑GGTTTTTTTGTGATCAATTTCAAAATAAAAACAATGATCCGATAAAAATAAAACAGCGTTTCAATTGA‑TGTGGTTTTGAT‑CACTTTTATTGATTAAATGAATGTCTATCTTCGTTTCCATCAACACTGATGCTCCATTGAGGAATTACGCATCAGCCCTTAAAAATATGCCGACAGGTGATGGAAATGCAGATAAAACGCTCGATTGAGAAAATCCCGGGGGGGATGATGCTCGTCCCGCTATTCCTTGGCGCA  >  NZ_CP009273/4091201‑4091686

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑