| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NZ_CP009273 | 4,555,655 | 0 | T | G | 33.3% | 143.1 / 12.5 | 66 | T5P (ACC→CCC) | yjiM | double‑cubane‑cluster‑containing anaerobic reductase |
| Reads supporting (aligned to +/- strand): ref base T (6/38); new base G (22/0); total (28/38) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 2.07e-12 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
| Rejected as consensus: Frequency below/above cutoff threshold. | |||||||||||
AAGCCGTAGCTGCTTTTAATCAGCGGGCAGAGGTTGCGCGGCAGATCTTTCTCCGCTTCTTCAATGGTTTCATCAGAGGTGGAACAGAGCGAAACCACAACCGCACCGGCTGCCATCGGGATCTCTTGCGGCATAAAGGTGCAGTAAGTGCCAACCAGCGGAATGCCGCGCTCCTTGAGATCCATGACGGTGAGAAAGCCTGTCTGGCGAGCTTCAGAGAACTGATCGAAAATGGCGGGTAGATC‑GGTGAC‑AAGTGACATG‑ATTTTCCTTCCCCGTACCACGGGAGATAATGAAAAGAGGCCACATTATTACCATTCTTTTAGTATGGTTTATTTGATCTCTCTCGCGGTTAGCCACTTAGTTTTTCATGGATTTCTAAAAATTGCCGAGGGGGAACAAGGCCGGGAGCTGCGACAGCAAATATAAAATTAGCCCAATACAACCGCCAACCAGCGTACCGTTGACACGAATAAACTGCAGATCTTTGCCGATATT > NZ_CP009273/4555408‑4555902 | aaGCCGTAGCTGCTTTTAATCAGCGGGCAGAGGTTGCGCGGCAGATCTTTCTCCGCTTCTTCAATGGTTTCATCAGAGGTGGAACAGAGCGAAACCACAACCGCACCGGCTGCCATCGGGATCTCTTGCGGCATAAAGGTGCAGTAAGTGCCAACCAGCGGAATGCCGCGCTCCTTGAGATCCATGACGGTGAGAAAGCCTGTCTGGCGAGCTTCAGAGAACTGATCGAAAATGGCGGGTAGATC‑GGTGa < 2:432723/250‑1 (MQ=255) ccGTAGCTGCTTTTAATCAGCGGGCAGAGGTTGCGCGGCAGATCTTTCTCCGCTTCTTCAATGGATTCATCAGAGGTGGAACAGAGCGAAACCACAACCGCACCGGCTGCCATCCGGCTCCCTTGCGGCATAAAGGTGCAGTAAGTGCCAACCAGCGGAATGCCGCGCTCCTTGAGATCCATGACGGTGAGAAAGCCTGTCTGGCGAGCTTCAGAGAACTGATCGAAAATGGCGGGGAGATC‑GGGGaggc > 2:29833/1‑247 (MQ=255) tttAATCAGCGGGCAGAGGTTGCGCGGCAGATCTTTCTCCGCTTCTTCAATGGTTTCATCAGAGGTGGAACAGAGCGAAACCACAACCGCACCGGCTGCCATCGGGATCTCTTGCGGCATAAAGGTGCAGTAAGTGCCAACCAGCGGAATGCCGCGCTCCTTGAGATCCATGACGGTGAGAAAGCCTGTCTGGCGAGCTTCAGAGAACTGATCGAAAATGGCGGGGAGATC‑GGGGGC‑AAGAGACATG‑Att > 1:270352/1‑250 (MQ=255) tAATCAGCGGGCAGAGGTTGCGCGGCAGATCTTTCTCCGCTTCTTCAATGGTTTCATCAGAGGTGGAACAGAGCGAAACCACAACCGCACCGGCTGCCATCGGGATCTCTTGCGGCATAAAGGTGCAGTAAGTGCCAACCAGCGGAATGCCGCGCTCCTTGAGATCCATGACGGTGAGAAAGCCTGTCTGGCGAGCTTCAGAGAACTGATCGAAAATGGCGGGGCGATT‑GGGGAC‑AAGGGACATG‑Atttt > 1:629081/1‑250 (MQ=255) cAGCGGGCAGAGGTTGCGCGGCAGATCTTTCTCCGCTTCTTCAATGGTTTCATCAGAGGTGGAACAGAGCGAAACCACAACCGCACCGGCTGCCATCGGGATCTCTTGCGGCATAAAGGTGCAGTAAGTGCCAACCAGCGGAATGCCGCGCTCCTTGAGATCCATGACGGTGAGAAAGCCTGTCTGGCGAGCTTCAGAGAACTGATCGAAAATGGCGGGTAGATC‑GGTGGC‑AAGAGACATG‑ATTttcctt > 1:459661/1‑250 (MQ=255) ggTTGCGCGGCAGATCTTTCTCCGCTTCTTCAATGGTTTCATCAGAGGTGGAACAGAGCGAAACCACAACCGCACCGGCTGCCATCGGGATCTCTTGCGGCATAAAGGTGCAGTAAGTGCCAACCAGCGGAATGCCGCGCTCCTTGAGATCCATGACGGTGAGAAAGCCTGTCTGGCGAGCTTCAGAGAACTGATCGAAAATGGCGGGTAGATC‑GGTGAC‑AAGTGACATG‑ATTTTCCTTCCCCGTACCAc < 1:583994/250‑1 (MQ=255) ggTTGCGCGGCAGATCTTTCTCCGCTTCTTCAATGGTTTCATCAGAGGTGGAACAGAGCGAAACCACAACCGCACCGGCTGCCATCGGGATCTCTTGCGGCATAAAGGTGCAGTAAGTGCCAACCAGCGGAATGCCGCGCTCCTTGAGATCCATGACGGTGAGAAAGCCTGTCTGGCGAGCTTCAGAGAACTGATCGAAAATGGCGGGGAGATC‑GGGGAC‑AAGGGAAATG‑ATTTTTCTTTCCCggtacac > 1:22245/1‑244 (MQ=255) ggCAGATCTTTCTCCGCTTCTTCAATGGTTTCATCAGAGGTGGAACAGAGCGAAACCACAACCGCACCGGCTGCCATCGGGATCTCTTGCGGCATAAAGGTGCAGTAAGTGCCAACCAGCGGAATGCCGCGCTCCTTGAGATCCATGACGGTGAGAAAGCCTGTCTGGCGAGCTTCAGAGAACTGATCGAAAATGGCGGGTAGATC‑GGTGAC‑AAGTGACATG‑ATTTTCCTTCCCCGTACCACGGGAGATa < 1:79596/250‑1 (MQ=255) ggCAGATCTTTCTCCGCTTCTTCAATGGTTTCATCAGAGGTGGAACAGAGCGAAACCACAACCGCACCGGCTGCCATCGGGATCTCTTGCGGCATAAAGGTGCAGTAAGTGCCAACCAGCGGAATGCCGCGCTCCTTGAGATCCATGACGGTGAGAAAGCCTGTCTGGCGAGCTTCAGAGAACTGATCGAAAATGGCGGGGAGAAC‑GGGGAC‑AAGGGACATG‑GTTTTTCTTCCCCGTACCCCggggggt > 1:54350/1‑245 (MQ=255) tCTTTCTCCGCTTCTTCAATGGTTTCATCAGAGGTGGAACAGAGCGAAACCACAACCGCACCGGCTGCCATCGGGATCTCTTGCGGCATAAAGGTGCAGTAAGTGCCAACCAGCGGAATGCTGCGCTCCTTGAGATCCATGACGGTGAGAAAGCCTGTCTGGCGAGCTTCAGAGAACTGATCGAAAATGGCGGGGAGCTCGGGGGAA‑AAGGGAC‑TG‑ATTTTTCTTTCCCGCACCCCGGGAGATAAAGaa > 2:153812/1‑249 (MQ=255) tttCTCCGCTTCTTCAATGGTTTCATCAGAGGTGGAACAGAGCGAAACCACAACCGCACCGGCTGCCATCGGGATCTCTTGCGGCATAAAGGTGCAGTAAGTGCCAACCAGCGGAATGCCGCGCTCCTTGAGATCCATGACGGTGAGAAAGCCTGTCTGGCGAGCTTCAGAGAACTGATCGAAAATGGCGGGTAGATC‑GGTGGC‑AAGTGAAATGCATTTCACTCCCCCGCACC‑CGGGGGagaaagaa > 2:584270/1‑247 (MQ=255) tctcCGCTTCTTCAATGGTTTCATCAGAGGTGGAACAGAGCGAAACCACAACCGCACCGGCTGCCATCGGGATCTCTTGCGGCATAAAGGTGCAGTAAGTGCCAACCAGCGGAATGCCGCGCTCCTTGAGATCCATGACGGTGAGAAAGCCTGTCTGGCGAGCTTCAGAGAACTGATCGAAAATGGCGGGTAGATC‑GGTGAC‑AAGTGACATG‑ATTTTCCTTCCCCGTACCACGGGAGATAATGaaaa < 2:62361/247‑1 (MQ=255) ccGCTTCTTCAATGGTTTCATCAGAGGTGGAACAGAGCGAAACCACAACCGCACCGGCTGCCATCGGGATCTCTTGCGGCATAAAGGTGCAGTAAGTGCCAACCAGCGGAATGCCGCGCTCCTTGAGATCCATGACGGTGAGAAAGCCTGTCTGGCGAGCTTCAGAGAACTGATCGAAAATGGCGGGTAGATC‑GGTGAC‑AAGTGACATG‑ATTTTCCTTCCCCGTACCACGGGAGATAATGAAAAGAGGcc < 1:84187/250‑1 (MQ=255) cGCTTCTTCAATGGTTTCATCAGAGGTGGAACAGAGCGAAACCACAACCGCACCGGCTGCCATCGGGATCTCTTGCGGCATAAAGGTGCAGTAAGTGCCAACCAGCGGAATGCCGCGCTCCTTGAGATCCATGACGGTGAGAAAGCCTGTCTGGCGAGCTTCAGAGAACTGATCGAAAATGGCGGGGAGAAC‑GGGGCCAAAGGGAAAGG‑A‑TTTCCTTCCCCGCACCCCGGGGGGAAATGGAAAAAAGCca > 2:379222/1‑250 (MQ=255) ttcttcAATGGTTTCATCAGAGGTGGAACAGAGCGAAACCACAACCGCACCGGCTGCCATCGGGATCTCTTGCGGCATAAAGGTGCAGTAAGTGCCAACCAGCGGAATGCCGCGCTCCTTGAGATCCATGACGGTGAGAAAGCCTGTCTGGCGAGCTTCAGAGAACTGATCGAAAATGGCGGGTGGATA‑GGGGGC‑AAGAGACATG‑GTTTTTCTTCCCCCTCCCACGGGCGAGAATGTAAAGAGGCCCCat > 2:110961/1‑250 (MQ=255) ttcttcAATGGTTTCATCAGAGGTGGAACAGAGCGAAACCACAACCGCACCGGCTGCCATCGGGATCTCTTGCGGCATAAAGGTGCAGTAAGTGCCAACCAGCGGAATGCCGCGCTCCTTGAGATCCATGACGGTGAGAAAGCCTGTCTGGCGAGCTTCAGAGAACTGATCGAAAATGGCGGGCAGATC‑GGTGGC‑AAGGGACATG‑ATTTTTCTTCCCCCTAACACGGGGGAGAATGAAAAAGAGCcacaa > 2:49766/1‑249 (MQ=255) ttcttcAATGGTTTCATCAGAGGTGGAACAGAGCGAAACCACAACCGCACCGGCTGCCATCGGGATCTCTTGCGGCATAAAGGCGCAGTAAGTGCCAACCAGCGGAATGCCGCGCTCCTTGAGATCCATGACGGTGAGAAAGCCTGTCTGGCGAGCTTCAGAGAACTGATCGAACATGGCGGGTAGATC‑GAGGGA‑AAAAGACAAG‑AATTTGCTTACCCGTCACCCGCGAGATAATGTAAAGAgggccaat > 2:342374/1‑244 (MQ=255) tcttcAATGGTTTCATCAGAGGTGGAACAGAGCGAAACCACAACCGCACCGGCTGCCATCGGGATCTCTTGCGGCATAAAGGTGCAGTAAGTGCCAACCAGCGGAATGCCGCGCTCCTTGAGATCCATGACGGTGAGAAAGCCTGTCTGGCGAGCTTCAGAGAACTGATCGAAAATGGCGGGTAGATC‑GGGGAC‑AAGTGACATT‑ATTTTCCTTCCCCCGACCACGGGGGATAATGAAAAAAGGGCACatt > 1:520261/1‑250 (MQ=255) ttcAATGGTTTCATCAGAGGTGGAACAGAGCGAAACCACAACCGCACCGGCTGCCATCGGGATCTCTTGCGGCATAAAGGTGCAGTAAGTGCCAACCAGCGGAATGCCGCGCTCCTTGAGATCCATGACGGTGAGAAAGCCTGTCTGGCGAGCTTCAGAGAACTGATCGAAAATGGCGGGTAGATA‑GGGGAC‑AAGTGACATG‑ATTTTTCTTCCCCGTACCACGGGGGATAATGAAAAAAGGCCCCattat > 1:105708/1‑250 (MQ=255) ttcAATGGTTTCATCAGAGGTGGAACAGAGCGAAACCACAACCGCACCGGCTGCCATCGGGATCTCTTGCGGCATAAAGGTGCAGTAAGTGCCAACCAGCGGAATGCCGCGCTCCTTGAGATCCATGACGGTGAGAAAGCCTGTCTGGCGAGCTTCAGAGAACTGATCGAAAATGGCGGGGAGATC‑GGGGAC‑AAAGGAGAGG‑ATTTTCTTTCCCCGTACCCCGGGAGGGAATGAAAAGAGGCCACattat > 2:136083/1‑250 (MQ=255) cAATGGTTTCATCAGAGGTGGAACAGAGCGAAACCACAACCGCACCGGCTGCCATCGGGATCTCTTGCGGCATAAAGGTGCAGTAAGTGCCAACCAGCGGAATGCCGCGCTCCTTGAGATCCATGACGGTGAGAAAGCCTGTCTGGCGAGCTTCAGAGAACTGATCGAAAATGGCGGGTAGATC‑GGTGAC‑AAGTGACATG‑ATTTTCCTTCCCCGTACCACGGGAGATAATGAAAAGAGGCCACattat < 1:293427/248‑1 (MQ=255) gTTTCATCAGAGGTGGAACAGAGCGAAACCACAACCGCACCGGCTGCCATCGGGATCTCTTGCGGCATAAAGGTGCAGTAAGTGCCAACCAGCGGAATGCCGCGCTCCTTGAGATCCATGACGGTGAGAAAGCCTGTCTGGCGAGCTTCAGAGAACTGATCGAAAATGGCGGGTAGATC‑GGTGAC‑AAGTGACATG‑ATTTTCCTTCCCCGTACCACGGGAGATAATGAAAAGAGGCCACATTATTACCAtt < 1:251797/250‑1 (MQ=255) tcaGAGGTGGAACAGAGCGAAACCACAACCGCACCGGCTGCCATCGGGATCTCTTGCGGCATAAAGGTGCAGTAAGTGCCAACCAGCGGAATGCCGCGCTCCTTGAGATCCATGACGGTGAGAAAGCCTGTCTGGCGAGCTTCAGAGAACTGATCGAAAATGGCGGGTAGATC‑GGTGAC‑AAGTGACATG‑ATTTTCCTTCCCCGTACCACGGGAGATAATGAAAAGAGGCCACATTATTACCATTCTTTTa < 1:299627/250‑1 (MQ=255) caGAGGTGGAACAGAGCGAAACCACAACCGCACCGGCTGCCATCGGGATCTCTTGCGGCATAAAGGTGCAGTAAGTGCCAACCAGCGGAATGCCGCGCTCCTTGAGATCCATGACGGTGAGAAAGCCTGTCTGGCGAGCTTCAGAGAACTGATCGAAAATGGCGGGTAGAAC‑GGGGGC‑CAGTGACATG‑ATTTTTCTTCCCCCCTCCCCGGGGGGAAATGAAAAAAAGCCCCCTTAATACCCATCtttttt > 2:440902/1‑248 (MQ=255) gagGTGGAACAGAGCGAAACCACAACCGCACCGGCTGCCATCGGGATCTCTTGCGGCATAAAGGTGCAGTAAGTGCCAACCAGCGGAATGCCGCGCTCCTTGAGATCCATGACGGTGAGAAAGCCTGTCTGGCGAGCTTCAGAGAACTGATCGAAAATGGCGGGTAGATC‑GGTGAC‑AAGTGACATG‑ATTTTCCTTCCCCGTACCACGGGAGATAATGAAAAGAGGCCACATTATTACCATTCTTTTAGTa < 2:170733/250‑1 (MQ=255) aCAGAGCGAAACCACAACCGCCCCGGCTGCCATCGGGATCTCTTGCGGCATAAAGGTGCAGTAAGTGCCAACCAGCGGAATGCCGCGCTCCTTGAGATCCATGACGGTGAGAAAGCCTGTCTGGCGAGCTTCAGAGAACTGATCGAAAATGGCGGGTAGATC‑GGTGAC‑AAGTGACATG‑ATTTTCCTTCCCCGTACCACGGGAGATAATGAAAAGAGGCCACATTATTACCATTCTTTTAGTATGGTTTAt < 2:599792/250‑1 (MQ=255) agagCGAAAACACAACCGCACCGGCTGCCATCGGGATCTCTTGCGGCATAAAGGTGCAGTAAGTGCCAACCAGCGGAATGCCGCGCTCCTTGAGATCCATGACGGTGAGAAAGCCTGTCTGGCGAGCTTCAGAGAACTGATCGAAAATGGCGGGTAGATC‑GGTGAC‑AAGTGACATG‑ATTTTCCTTCCCCGTACCACGGGAGATAATGAAAAGAGGCCACATTATTACCATTCTTTTAGTATGGTTTAttt < 2:55385/250‑1 (MQ=255) agCGAAACCACAACCGCACCGGCTGCCATCGGGATCTCTTGCGGCATAAAGGTGCAGTAAGTGCCAACCAGCGGAATGCCGCGCTCCTTGAGATCCATGACGGTGAGAAAGCCTGTCTGGCGAGCTTCAGAGAACTGATCGAAAATGGCGGGTAGATC‑GGTGAC‑AAGTGACATG‑ATTTTCCTTCCCCGTACCACGGGAGATAATGAAAAGAGGCCACATTATTACCATTCTTTTAGTATGGTTTATTTGa < 1:138403/250‑1 (MQ=255) aaCCACAACCGCACCGGCTGCCATCGGGATCTCTTGCGGCATAAAGGTGCAGTAAGTGCCAACCAGCGGAATGCCGCGCTCCTTGAGATCCATGACGGTGAGAAAGCCTGTCTGGCGAGCTTCAGAGAACTGATCGAAAATGGCGGGTAGATC‑GGTGAC‑AAGTGACATG‑ATTTTCCTTCCCCGTACCACGGGAGATAATGAAAAGAGGCCACATTATTACCATTCTTTTAGTATGGTTTATTTGAtctct < 1:571140/250‑1 (MQ=255) ccACAACCGCACCGGCTGCCATCGGGATCTCTTGCGGCATAAAGGTGCAGTAAGTGCCAACCAGCGGAATGCCGCGCTCCTTGAGATCCATGACGGTGAGAAAGCCTGTCTGGCGAGCTTCAGAGAACTGATCGAAAATGGCGGGTAGATC‑GGTGAC‑AAGTGACATG‑ATTTTCCTTCCCCGTACCACGGGAGATAATGAAAAGAGGCCACATTATTACCATTCTTTTAGTATGGTTTATTTGAtctctct < 1:620361/250‑1 (MQ=255) ccACAACCGCACCGGCTGCCATCGGGATCTCTTGCGGCATAAAGGTGCAGTAAGTGCCAACCAGCGGAATGCCGCGCTCCTTGAGATCCATGACGGTGAGAAAGCCTGTCTGGCGAGCTTCAGAGAACTGATCGAAAATGGCGGGTAGATC‑GGTGAC‑AAGTGACATG‑ATTTTCCTTCCCCGTACCACGGGAGATAATGAAAAGAGGCCACATTATTACCATTCTTTTAGTATGGTTTATTTGAtctctct < 1:53869/250‑1 (MQ=255) ccACAACCGCACCGGCTGCCATCGGGATCTCTTGCGGCATAAAGGTGCAGTAAGTGCCAACCAGCGGAATGCCGCGCTCCTTGAGATCCATGACGGTGAGAAAGCCTGTCTGGCGAGCTTCAGAGAACTGATCGAAAATGGCGGGTAGATC‑GGTGAC‑AAGTGACATG‑ATTTTCCTTCCCCGTACCACGGGAGATAATGAAAAGAGGCCACATTATTACCATTCTTTTAGTATGGTTTATTTGAtctctct < 2:484028/250‑1 (MQ=255) ccACAACCGCACCGGCTGCCATCGGGATCTCTTGCGGCATAAAGGTGCAGTAAGTGCCAACCAGCGGAATGCCGCGCTCCTTGAGATCCATGACGGTGAGAAAGCCTGTCTGGCGAGCTTCAGAGAACTGATCGAAAATGGCGGGTAGATC‑GGGGAC‑AAGGGACATG‑ATTTTTCTTCCCCGTACCACGGGAGATAATGAAAAGAAGCCACATTATTACCATTTTTTTAGTATGGTTTATTTGTtttctct > 1:165038/1‑250 (MQ=255) acaACCGCACCGGCTGCCATCGGGATCTCTTGCGGCATAAAGGTGCAGTAAGTGCCAACCAGCGGAATGCCGCGCTCCTTGAGATCCATGACGGTGAGAAAGCCTGTCTGGCGAGCTTCAGAGAACTGATCGAAAATGGCGGGGAGATC‑GGGGAC‑AAGGGAAATG‑ATTTTTCTTCCCCGTGCCCCCGGGGGAAATGGAAAGAGGCCACATTTTTACCATTTCTTTTGTATGGTTTATTTTAtctctctcc > 2:576874/1‑249 (MQ=255) acaACCGCACCGGCTGCCATCGGGATCTCTTGCGGCATAAAGGTGCAGTAAGTGCCAACCAGCGGAATGCCGCGCTCCTTGAGATCCATGACGGTGAGAAAGCCTGTCTGGCGAGCTTCAGAGAACTGAACGAAAATGGCGGGTAGAAC‑GGGGGG‑AAGTGAAATG‑AATTTGCTTCCCCGGATCACGGGAGAGAAAGAAAAGAGGGCACATTATTAACATTATTTTTGTAAGGTTTTTTTTAtatcattct > 2:340946/1‑245 (MQ=255) ccATCGGGATCTCTTGCGGCATAAAGGTGCAGTAAGTGCCAACCAGCGGAATGCCGCGCTCCTTGAGATCCATGACGGTGAGAAAGCCTGTCTGGCGAGCTTCAGAGAACTGATCGAAAATGGCGGGTAGATC‑GGTGAC‑AAGTGACATG‑ATTTTCCTTCCCCGTACCACGGGAGATAATGAAAAGAGGCCACATTATTACCATTCTTTTAGTATGGTTTATTTGATCTCTCTCGCGGTTAGCCACTTAg < 1:445171/249‑1 (MQ=255) gggATCTCTTGCGGCATAAAGGTGCAGTAAGTGCCAACCAGCGGAATGCCGCGCTCCTTGAGATCCATGACGGTGAGAAAGCCTGTCTGGCGAGCTTCAGAGAACTGATCGAAAATGGCGGGTAGATC‑GGTGAC‑AAGTGACATG‑ATTTTCCTTCCCCGTACCACGGGAGATAATGAAAAGAGGCCACATTATTACCATTCTTTTAGTATGGTTTATTTGATCTCTCTCGCGGTTAGCCACTTAGttttt < 2:201118/249‑1 (MQ=255) gggATCTCTTGCGGCATAAAGGTGCAGTAAGTGCCAACCAGCGGAATGCCGCGCTCCTTGAGATCCATGACGGTGAGAAAGCCTGTCTGGCGAGCTTCAGAGAACTGATCGAAAATGGCGGGTAGATC‑GGTGAC‑AAGTGACATG‑ATTTTCCTTCCCCGTACCACGGGAGATAATGAAAAGAGGCCACATTATTACCATTCTTTTAGTATGGTTTATTTGATCTCTCTCGCGGTTAGCCACTTAGTTTTTc < 2:476092/250‑1 (MQ=255) ttGCGGCATAAAGGTGCAGTAAGTGCCAACCAGCGGAATGCCGCGCTCCTTGAGATCCATGACGGTGAGAAAGCCTGTCTGGCGAGCTTCAGAGAACTGATCGAAAATGGCGGGTAGATC‑GGTGAC‑AAGTGACATG‑ATTTTCCTTCCCCGTACCACGGGAGATAATGAAAAGAGGCCACATTATTACCATTCTTTTAGTATGGTTTATTTGATCTCTCTCGCGGTTAGCCACTTAGTTTTTCATgg < 1:345410/246‑1 (MQ=255) aTAAAGGTGCAGTAAGTGCCAACCAGCGGAATGCCGCGCTCCTTGAGATCCATGACGGTGAGAAAGCCTGTCTGGCGAGCTTCAGAGAACTGATCGAAAATGGCGGGGATTTC‑GGGGAT‑AAGTGGCATG‑ATTTTTCTTCCCCGTACCACCGGAGAAAATAAAAAAAGGGCACAATATTACCATTCTTTTTATATGGTTTATTTTATCTCTCTCGCGGGTAGCCCATTTGTGTTTCATGGAGTTCtgaca > 2:148259/1‑245 (MQ=255) aaaGGTGCAGTAAGTGCCAACCAGCGGAATGCCGCGCTCCTTGAGATCCATGACGGTGAGAAAGCCTGTCTGGCGAGCTTCAGAGAACTGATCGAAAATGGCGGGTAGAAC‑GGGGAC‑AAGTGACATG‑ATTTTTCTTCCCCGGACCACGGGGGATAATGAAAAGAGGCCACATTATTACCATTCTTTTTGTATGGTTTATTTTATCTCTCTCGCGGGTAGCCACTTAGTTTTTTATGGATTTCTAAAAAtt > 2:146526/1‑250 (MQ=255) aGTGCCAACCAGCGGAATGCCGCGCTCCTTGAGATCCATGACGGTGAGAAAGCCTGTCTGGCGAGCTTCAGAGAACTGATCGAAAATGGCGGGTAGATC‑GGTGAC‑AAGTGACATG‑ATTTTCCTTCCCCGTACCACGGGAGATAATGAAAAGAGGCCACATTATTACCATTCTTTTAGTATGGTTTATTTGATCTCTCTCGCGGTTAGCCACTTAGTTTTTCATGGATTTCTAAAAATTGCCGAGGGGGaa < 2:629914/250‑1 (MQ=255) aGTGCCAACCAGCGGAATGCCGCGCTCCTTGAGATCCATGACGGTGAGAAAGCCTGTCTGGCGAGCTTCAGAGAACTGATCGAAAATGGCGGGTAGATC‑GGTGAC‑AAGTGACATG‑ATTTTCCTTCCCCGTACCACGGGAGATAATGAAAAGAGGCCACATTATTACCATTCTTTTAGTATGGTTTATTTGATCTCTCTCGCGGTTAGCCACTTAGTTTTTCATGGATTTCTAAAAATTGCCGAGGGGGa < 2:314188/249‑1 (MQ=255) cAACCAGCGGAATGCCGCGCTCCTTGAGATCCATGACGGTGAGAAAGCCTGTCTGGCGAGCTTCAGAGAACTGATCGAAAATGGCGGGTAGATC‑GGTGAC‑AAGTGACATG‑ATTTTCCTTCCCCGTACCACGGGAGATAATGAAAAGAGGCCACATTATTACCATTCTTTTAGTATGGTTTATTTGATCTCTCTCGCGGTTAGCCACTTAGTTTTTCATGGATTTCTAAAAATTGCCGAGGGGGAACAAgg < 1:57899/250‑1 (MQ=255) cAACCAGCGGAATGCCGCGCTCCTTGAGATCCATGACGGTGAGAAAGCCTGTCTGGCGAGCTTCAGAGAACTGATCGAAAATGGCGGGTAGATC‑GGTGAC‑AAGTGACATG‑ATTTTCCTTCCCCGTACCACGGGAGATAATGAAAAGAGGCCACATTATTACCATTCTTTTAGTATGGTTTATTTGATCTCTCTCGCGGTTAGCCACTTAGTTTTTCATGGATTTCTAAAAATTGCCGAGGGGGAACAAgg < 2:388317/250‑1 (MQ=255) gAATGCCGCGCTCCTTGAGATCCATGACGGTGAGAAAGCCTGTCTGGCGAGCTTCAGAGACCTGATCGAAAATGGCGGGTAGATC‑GGGGAC‑AAGTGACATG‑ATTTTTCTTCCCCGTACCACGGGAGATAAATAAAAGAGGGCACATTTTTTCCATTCTTTTTGTATTGTTTATTTGGTTTTTCTCGTGGTTTGCCACTTAGTTTTTTTTGGGTTTTTTAAAATTGCCGATGGGGAACAAGGCCGGGAggt > 1:147391/1‑248 (MQ=255) aaTGCCGCGCTCCTTGAGATCCATGACGGTGAGAAAGCCTGTCTGGCGAGCTTCAGAGAACTGATCGAAAATGGCGGGTAGATC‑GGTGAC‑AAGTGACATG‑ATTTTCCTTCCCCGTACCACGGGAGATAATGAAAAGAGGCCACATTATTACCATTCTTTTAGTATGGTTTATTTGATCTCTCTCGCGGTTAGCCACTTAGTTTTTCATGGATTTCTAAAAATTGCCGAGGGGGAACAAGGCCGGGAGCTg < 2:610565/250‑1 (MQ=255) aaTGCCGCGCTCCTTGAGATCCATGACGGTGAGAAAGCCTGTCTGGCGAGCTTCAGAGAACTGATCGAAAATGGCGGGTAGATC‑GGTGAC‑AAGTGACATG‑ATTTTCCTTCCCCGTACCACGGGAGATAATGAAAAGAGGCCACATTATTACCATTCTTTTAGTATGGTTTATTTGATCTCTCTCGCGGTTAGCCACTTAGTTTTTCATGGATTTCTAAAAATTGCCGAGGGGGAACAAGGCCGGGAGCTg < 1:484466/250‑1 (MQ=255) gcTCCTTGAGATCCATGACGGTGAGAAAGCCTGTCTGGCGAGCTTCAGAGAACTGATCGAAAATGGCGGGGAGATC‑GGGGGC‑AAGTGGCATG‑ATTTTTCTTCCCCGCACCACGGGAGGTAATGAAAAAAGGCCACATTATTACCATTCTTTTTGTTTGGTTTTTTTTATCTCTCTCTCGGTTCGCCACTTAGTTTTTTCTGGTTTTTTAAAAATTTCCGAGGGGGAAACAAGCCGGGAGCTgggtacgc > 2:453156/1‑242 (MQ=255) cTCCTTGAGATCCATGACGGTGAGAAAGCCTGTCTGGCGAGCTTCAGAGAACTGATCGAAAATGGCGGGTAGATC‑GGTGAC‑AAGTGACATG‑ATTTTCCTTCCCCGTACCACGGGAGATAATGAAAAGAGGCCACATTATTACCATTCTTTTAGTATGGTTTATTTGATCTCTCTCGCGGTTAGCCACTTAGTTTTTCATGGATTTCTAAAAATTGCCGAGGGGGAACAAGGCCGGGAGCTGCGACAGCaa < 1:11765/250‑1 (MQ=255) cTTGAGATGCGTGACGGTGAGAAAGCCTGTCTGGCGAGCTTCAGAGAACTGATCGAAAATGGCGGGTAGATC‑GGTGAC‑AAGTGACATG‑ATTTTCCTTCCCCGTACCACGGGAGATAATGAAAAGAGGCCACATTATTACCATTCTTTTAGTATGGTTTATTTGATCTCTCTCGCGGTTAGCCTCTTAGTTTTTCATGGATTTCTAAAAATTGCCGAGGGGGAACAAGGCCGGGAGCTGCGACAGCAAat < 2:241617/249‑1 (MQ=255) aTCCATGACGGTGAGAAAGCCTGTCTGGCGAGCTTCAGAGAACTGATCGAAAATGGCGGGGAGATC‑GGGGAC‑AAGAGAAAAG‑AATTTCCTTTCCCGTACCACGGGGGATAATGAAAAGAGGCCACATTATTACCATTCTTTTAGTATGGTTTATTTTATCTCTCTCGCGGTTAGCCACTTTGTTTTTTATGGGTTTCTAAAAATTGCCGAGGGGGGACAAGGCCGGGGGCTGCGAAAGACaaaataaaat > 1:307843/1‑250 (MQ=255) cATGACGGTGAGAAAGCCTGTCTGGCGAGCTTCAGAGAACTGATCGAAAATGGCGGGTAGATC‑GGTGAC‑AAGTGACATG‑ATTTTCCTTCCCCGTACCACGGGAGATAATGAAAAGAGGCCACATTATTACCATTCTTTTAGTATGGTTTATTTGATCTCTCTCGCGGTTAGCCACTTAGTTTTTCATGGATTTCTAAAAATTGCCGAGGGGGAACAAGGCCGGGAGCTGCGACAGCAAATATAAAATTAg < 2:50133/250‑1 (MQ=255) cATGACGGTGAGAAAGCCTGTCTGGCGAGCTTCAGAGAACTGATCGAAAATGGCGGGTAGAAC‑GGGGAC‑AAGTGACATG‑ATTTTTCTTTCCCGCACCACGGGAGGTAATGAAAAAAGGCCACATTATTTTCATTCTTTTTGTATGGTTTTTTTGATTTCTCTCCCGGTTAGCCACTTATTTTTTTTTGGATTTTTAAAAATTGCCGCGGGGGAACAAGGCCGGGGGGTGCGACAGCAAATATAAAATTAg > 2:299965/1‑250 (MQ=255) tGACGGTGAGAAAGCCTGTCTGGCGAGCTTCAGAGAACTGATCGAAAATGGCGGGAAGGGT‑GGTGGA‑AAGGGTCAAA‑CTTTTCCTCTCCCCTACCACAGGAGATAAAGAAAAAAGGCCACATTTTTTTCTTTTTTTTTGTAATGTTTTTTTGTTATCTCTCGCGGCTCTCCAATTTGTTTTTTTTTGATTTTTAAAAATTGCCGTGGGGGAACAAAGCCGGGGGGCGCGAACACAAATTAAAAAtttaaa > 2:154771/1‑246 (MQ=255) agaAAGCCTGTCTGGCGAGCTTCAGAGAACTGATCGAAAATGGCGGGTAGATC‑GGTGAC‑AAGTGACATG‑ATTTTCCTTCCCCGTACCACGGGAGATAATGAAAAGAGGCCACATTATTACCATTCTTTTAGTATGGTTTATTTGATCTCTCTCGCGGTTAGCCACTTAGTTTTTCATGGATTTCTAAAAATTGCCGAGGGGGAACAAGGCCGGGAGCTGCGACAGCAAATATAAAATTAGCCCAATACaa < 2:96848/250‑1 (MQ=255) agaACTGATCGAAAATGGCGGGTAGATC‑GGTGAC‑AAGTGACATG‑ATTTTCCTTCCCCGTACCACGGGAGATAATGAAAAGAGGCCACATTATTACCATTCTTTTAGTATGGTTTATTTGATCTCTCTCGCGGTTAGCCACTTAGTTTTTCATGGATTTCTAAAAATTGCCGAGGGGGAACAAGGCCGGGAGCTGCGACAGCAAATATAAAATTAGCCCAATACAACCGCCAACCAGCGTACCGTTGacac < 1:146526/250‑1 (MQ=255) aTCGAAAATGGCGGGTAGATC‑GGTGAC‑AAGTGACATG‑ATTTTCCTTCCCCGTACCACGGGAGATAATGAAAAGAGGCCACATTATTACCATTCTTTTAGTATGGTTTATTTGATCTCTCTCGCGGTTAGCCACTTAGTTTTTCATGGATTTCTAAAAATTGCCGAGGGGGAACAAGGCCGGGAGCTGCGACAGCAAATATAAAATTAGCCCAATACAACCGCCAACCAGCGTACCGTTGACACGAATaa < 1:205379/249‑1 (MQ=255) gAAAATGGCGGGTAGATC‑GGTGAC‑AAGTGACATG‑ATTTTCCTTCCCCGTACCACGGGAGATAATGAAAAGAGGCCACATTATTACCATTCTTTTAGTATGGTTTATTTGATCTCTCTCGCGGTTAGCCACTTAGTTTTTCATGGATTTCTAAAAATTGCCGAGGGGGAACAAGGCCGGGAGCTGCGACAGCAAATATAAAATTAGCCCAATACAACCGCCAACCAGCGTACCGTTGACACGAATAAACTg < 1:576874/250‑1 (MQ=255) aaaaTGGCGGGTAGATC‑GGTGAC‑AAGTGACATG‑ATTTTTCTTCCCCGTACCCCGGGGGATAATGAAAAAAGGGCACATTATTTCCATTCTTTTTGTATTGGTTTTTTTATCTCTCTCCCGGTTTGCCACTTATTTTTTTATGGTTTTTTAAAAAATGCCGAGGGGGAAAAAAGCCGGGAGCTGCGGCAGCAAATATAAAATTAGCCCAAAACAAACCCCAACCCGCGTACCCTTGACACGAATAAAATg > 2:278932/1‑249 (MQ=255) aaaaTGGCGGGTAGATC‑GGTGAC‑AAGTGACATG‑ATTTTCCTTCCCCGTACCACGGGAGATAATGAAAAGAGGCCACATTATTACCATTCTTTTAGTATGGTTTATTTGATCTCTCTCGCGGTTAGCCACTTAGTTTTTCATGGATTTCTAAAAATTGCCGAGGGGGAACAAGGCCGGGAGCTGCGACAGCAAATATAAAATTAGCCCAATACAACCGCCAACCAGCGTACCGTTGACACGAATAAACTGc < 1:631597/250‑1 (MQ=255) tC‑GGTGAC‑AAGTGACATG‑ATTTTCCTTCCCCGTACCACGGGAGATAATGAAAAGAGGCCACATTATTACCATTCTTTTAGTATGGTTTATTTGATCTCTCTCGCGGTTAGCCACTTAGTTTTTCATGGATTTCTAAAAATTGCCGAGGGGGAACAAGGCCGGGAGCTGCGACAGCAAATATAAAATTAGCCCAATACAACCGCCAACCAGCGTACCGTTGACACGAATAAACTGCAGATCTTTGCCGata < 2:520261/250‑1 (MQ=255) c‑GGTGAC‑AAGTGACATG‑ATTTTCCTTCCCCTTACCTCGGCAGATAATTAATAGAGGCCACATTATTTCCATTCTTTTTGTCTGGTTTATTTGATCTCTCGCGCGGTTGGCCACTTAGTTTTTCATGGATTTCTAAAAATTGCCGAGGGGGAACAAGGCCGGGAGCTGCGACAGCAAATATAAAATTAGCCCAATACAACCGCCAACCAGCGTACCGTTAACACGAATAAACTGCAGATCTTTTCCGatat < 2:129446/250‑1 (MQ=255) c‑GGTGAC‑AAGTGACATG‑ATTTTCCTTCCCCGTACCACGGGAGATAATGAAAAGAGGCCACATTATTACCATTCTTTTAGTATGGTTTATTTGATCTCTCTCGCGGTTAGCCACTTAGTTTTTCATGGATTTCTAAAAATTGCCGAGGGGGAACAAGGCCGGGAGCTGCGACAGCAAATATAAAATTAGCCCAATACAACCGCCAACCAGCGTACCGTTGACACGAATAAACTGCAGATCTTTGCCGatat > 2:602018/1‑250 (MQ=255) ggTGAC‑AAGTGCCATG‑ATTATCCGACCCCTTACCACAGGAGATAAGGAAAAGAGGCCACAATATTACCATTCTTTTAGTATGGATTATTTGATCTCTCTCGCGGTTAGCCACTTGGTTTCTCATGGATTTCTAAAAATAACCGAGGGGGAACAAGGCCGGGAGCTGCGACAGCAAATATAAAATTAGCCCAATACAACCGCCAACCAGCGTACCGTGGACACGAATAAACTGCAGATCTTTGCCGatata < 2:39749/250‑2 (MQ=255) ggTGAC‑AAGTGACATG‑ATTTTCCTTCCCCGTACCACGGGAGATAATGAAAAGAGGCCACATTATTACCATTCTTTTAGTATGGTTTATTTGATCTCTCTCGCGGTTAGCCACTTAGTTTTTCATGGATTTCTAAAAATTGCCGAGGGGGAACAAGGCCGGGAGCTGCGACAGCAAATATAAAATTAGCCCAATACAACCGCCAACCAGCGTACCGTTGACACGAATAAACTGCAGATCTTTGCCGATAtt < 1:573903/250‑1 (MQ=255) | AAGCCGTAGCTGCTTTTAATCAGCGGGCAGAGGTTGCGCGGCAGATCTTTCTCCGCTTCTTCAATGGTTTCATCAGAGGTGGAACAGAGCGAAACCACAACCGCACCGGCTGCCATCGGGATCTCTTGCGGCATAAAGGTGCAGTAAGTGCCAACCAGCGGAATGCCGCGCTCCTTGAGATCCATGACGGTGAGAAAGCCTGTCTGGCGAGCTTCAGAGAACTGATCGAAAATGGCGGGTAGATC‑GGTGAC‑AAGTGACATG‑ATTTTCCTTCCCCGTACCACGGGAGATAATGAAAAGAGGCCACATTATTACCATTCTTTTAGTATGGTTTATTTGATCTCTCTCGCGGTTAGCCACTTAGTTTTTCATGGATTTCTAAAAATTGCCGAGGGGGAACAAGGCCGGGAGCTGCGACAGCAAATATAAAATTAGCCCAATACAACCGCCAACCAGCGTACCGTTGACACGAATAAACTGCAGATCTTTGCCGATATT > NZ_CP009273/4555408‑4555902 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |