Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NZ_CP0092731,870,2720AG38.5% 53.5 / 13.9 39I115V (ATT→GTT) nimT2‑nitroimidazole transporter
Reads supporting (aligned to +/- strand):  ref base A (4/20);  new base G (15/0);  total (19/20)
Fisher's exact test for biased strand distribution p-value = 1.54e-07
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00
Rejected as consensus: Frequency below/above cutoff threshold.

CGTTACTGGATACGATTCGTTCCGCTTACTCGCTGACGACAGCGCAAACCGGCTTATTGACCACCCTGCCATTATTGGCCTTTGCGCTAATCTCACCTTTGGCTGCCCCGGTAGCGCGACGTTTTGGTATGGAACGTAGCCTGTTTGCCGCGTTACTTTTGATCTGTGCTGGTATCGCAATTCGCTCTCTCCCTTCGCCTTACTTATTATTTGGCGGTACAGCGGTCATTGGCGGTGGGATTGCATTAGGCAATGTCTTACTGCCAGGATTAATTAAACGCGATTTCCCTCATTCCGTCGCCAGACTTACCGGCGCATATTCCCTGACAATGGGAGCTGCAGCGGCACTGGGATCGGCTATGGTCGTGCCGCTGGCTTTGAACGGTTTTGGCTGGCAAGGCGCGTTGCTCATGCTGATGTGTTTTCCTCTGCTGGCTCTTTTTTTATGGCTGCCACAGTGGCGAAGTC  >  NZ_CP009273/1870033‑1870500
                                                                                                                                                                                                                                               |                                                                                                                                                                                                                                    
cGTTACTGGATACGATTCGTTCCGCTTACTCGCTGACGACAGCGCAAACCGGCTTATTGACCACCCTGCCATTATTGGCCTTTGCGCTAATCTCACCTTTGGCTGCCCCGGTAGCGCGACGTTTTGGTATGGAACGTAGCCTGTTTGCCGCGTTACTTTTGATCTGTGCTGGTATCGCAATTCGCTCTCTCCCTTCGCCTTACTTATTATTTGGCGGTACAGCGGTCATTGGCGGTGGGATTGCATTAgg                                                                                                                                                                                                                            <  1:409565/250‑1 (MQ=255)
     cTGGTTACGATTCGTTCCTCTTCCTCTCTGACGACGTCCCAAACCTGCTTATTGCCCACCCTGCCATTATTGGCCTTTGCGCTAATCTCACCTTTGGCTGCCCCGGTAGCGCGACGTTTTGGTATTGAACGTAGCCTGTTTGCCGCGTTACTTTTGATCTGTGCTGGTATCGCAATTCGCTCTCTCCCTTCGCCTTACTTATTATTTGGCGGTACAGCGGTCATTGGCGGTGGGATTGCATTAGGCAATg                                                                                                                                                                                                                       <  2:131999/250‑1 (MQ=255)
              aTTCGTTCCGCTTACTCGCTGACGACAGCGCAAACCGGCTTATTGACCACCCTGCCATTATTGGCCTTTGCGCTAATCTCACCTTTGGCTGCCCCGGTAGCGCGACGTTTTGGTATGGAACGTAGCCTGTTTGCCGCGTTACTTTTGATCTGTGCTGGTATCGCAATTCGCTCTCTCCCTTCGCCTTACTTATTATTTGGCGGTACAGCGGTCATTGGCGGTGGGATTGCATTAGGCAATGTCTTACTGc                                                                                                                                                                                                              <  1:373221/250‑1 (MQ=255)
                           acccgacgacgacAGCCCAAACCGGTTTATTGCCCCCCCTGCCATTATTGGCCTTTGCGCTAATCTCACCTTTGGCTGCCCCGGTAGCGCGACGTTTTGGTATGGAACGTAGCCTGTTTGCCGCGTTACTTTTGATCTGTGCTGGTATCGCAATTCGCTCTCTCCCTTCGCCTTACTTATTATTTGGCGGTACAGCGGTCATTGGCGGTGGGATTGCATTAGGCAATGTCTTACTGCCAGGattaatta                                                                                                                                                                                                  <  2:415333/242‑1 (MQ=255)
                           aCTCGCTGACGACAGCGCAAACCGGCTTATTGACCACCCTGCCATTATTGGCCTTTGCGCTAATCTCACCTTTGGCTGCCCCGGTAGCGCGACGTTTTGGTATGGAACGTAGCCTGTTTGCCGCGTTACTTTTGATCTGTGCTGGTATCGCAATTCGCTCTCTCCCTTCGCCTTACTTATTATTTGGCGGTACAGCGGTCATTGGCGGTGGGATTGCATTAGGCAATGTCTTACTGCCAGGattaatta                                                                                                                                                                                                  <  1:545826/249‑1 (MQ=255)
                             tCGCTGACGACAGCGCAAACCGGCTTATTGACCACCCTGCCATTATTGGCCTTTGCGCTAATCTCACCTTTGGCTGCCCCGGTAGCGCGACGTTTTGGTATGGAACGTAGCCTGTTTGCCGCGTTACTTTTGATCTGTGCTGGTATCGCAATTCGCTCTCTCCCTTCGCCTTACTTATTATTTGGCGGTACAGCGGTCATTGGCGGTGGGGTTGCATTAGGCAATGTCTTACTGCCAGGATTAATTAAAc                                                                                                                                                                                               >  1:230708/1‑250 (MQ=255)
                                             aaaCCGGCTTATTGACCACCCTGCCATTATTGGCCTTTGCGCTAATCTCACCTTTGGCTGCCCCGGTAGCGCGACGTTTTGGTATGGAACGTAGCCTGTTTGCCGCGTTACTTTTGATCTGTGCTGGTATCGCAATTCGCTCTCTCCCTTCGCCTTACTTATTATTTGGCGGTACAGCGGTCATTGGCGGTGGGATTGCATTAGGCAATGTCTTACTGCCAGGATTAATTAAACGCGATTTCCCTCATTc                                                                                                                                                                               <  1:506469/250‑1 (MQ=255)
                                                  ggCTTATTGACCACCCTGCCATTATTGGCCTTTGCGCTAATCTCACCTTTGGCTGCCCCGGTAGCGCGACGTTTTGGTATGGAACGTAGCCTGTTTGCCGCGTTACTTTTGATCTGTGCTGGTATCGCAATTCGCTCTCTCCCTTCGCCTTACTTATTATTTGGCGGTACAGCGGTCATTGGCGGTGGGATTGCATTAGGCAATGTCTTACTGCCAGGATTAATTAAACGCGATTTCCCTCATTCCGTCg                                                                                                                                                                          <  2:354058/250‑1 (MQ=255)
                                                    cTTATTGACCACCCTGCCATTATTGGCCTTTGCGCTAATCTCACCTTTGGCTGCCCCGGTAGCGCGACGTTTTGGTATGGAACGTAGCCTGTTTGCCGCGTTACTTTTGATCTGTGCTGGTATCGCAATTCGCTCTCTCCCTTCGCCTTACTTATTATTTGGCGGTACAGCGGTCATTGGCGGTGGGGTTTCCTTTGGCAATTTCTTTCTGCCAGGATTAATTTAAAGCGCTTTCCCTCCTTTCgccgcc                                                                                                                                                                        >  2:551322/1‑250 (MQ=255)
                                                     ttATTGACCACCCTGCCATTATTGGCCTTTGCGCTAATCTCACCTTTGGCTGCCCCGGTAGCGCGACGTTTTGGTATGGAACGTAGCCTGTTTGCCGCGTTACTTTTGATCTGTGCTGGTATCGCAATTCGCTCTCTCCCTTCGCCTTACTTATTATTTGGCGGTACAGCGGTCATTGGCGGTGGGGTTGCATTAGGGCATGTTTTACTGTCAGGATTAATTTAACGCGATTTCCCTCATTTCGTCGc                                                                                                                                                                         >  1:343987/1‑248 (MQ=255)
                                                           accaccCTGCCATTATTGGCCTTTGCGCTAATCTCACCTTTGGCTGCCCCGGTAGCGCGACGTTTTGGTATGGAACGTAGCCTGTTTGCCGCGTTACTTTTGATCTGTGCTGGTATCGCAATTCGCTCTCTCCCTTCGCCTTACTTATTATTTGGCGGTACAGCGGTCATTGGCGGTGGGATTGCATTAGGCAATGTCTTACTGCCAGGATTAATTAAACGCGATTTCCCTCATTCCGTCGCCAGACTTa                                                                                                                                                                 <  1:449759/250‑1 (MQ=255)
                                                            ccaccCTGCCATTATTGGCCTTTGCGCTAATCTCACCTTTGGCTGCCCCGGTAGCGCGACGTTTTGGTATGGAACGTAGCCTGTTTGCCGCGTTACTTTTGATCTGTGCTGGTATCGCAATTCGCTCTCTCCCTTCGCCTTACTTATTATTTGGCGGTACAGCGGTCATTGGCGGTGGGATTGCATTAGGCAATGTCTTACTGCCAGGATTAATTAAACGCGATTTCCCTCATTCCGTCGCCAGACTTAc                                                                                                                                                                <  1:546931/250‑1 (MQ=255)
                                                             caccCTGCCATTATTGGCCTTTGCGCTAATCTCACCTTTGGCTGCCCCGGTAGCGCGACGTTTTGGTATGGAACGTAGCCTGTTTGCCGCGTTACTTTTGATCTGTGCTGGTATCGCAATTCGCTCTCTCCCTTCGCCTTACTTATTATTTGGCGGTACAGCGGTCATTGGCGGTGGGATTGTATTAGGCCATGTCTTTCTGCCAGGATTAATTAAAAGCGGTTTTCCCCATTCCGTCGCCAGACTTAcc                                                                                                                                                               >  1:197233/1‑250 (MQ=255)
                                                                   gCCATTATTGGCCTTTGCGCTAATCTCACCTTTGGCTGCCCCGGTAGCGCGACGTTTTGGTATGGAACGTAGCCTGTTTGCCGCGTTACTTTTGATCTGTGCTGGTATCGCAATTCGCTCTCTCCCTTCGCCTTACTTATTATTTGGCGGTACAGCGGTCATTGGCGGTGGGGTTTCATTAGGCAATGTCTTACTGCCCGGGTTAATTAAACGCGATTTTCCTCATTCCGTCGCCAGACTTACCGgcgcc                                                                                                                                                         >  1:135798/1‑249 (MQ=255)
                                                                     cATTATTGGCCTTTGCGCTAATCTCACCTTTGGCTGCCCCGGTAGCGCGACGTTTTGGTATGGAACGTAGCCTGTTTGCCGCGTTACTTTTGATCTGTGCTGGTATCGCAATTCGCTCTCTCCCTTCGCCTTACTTATTATTTGGCGGTACAGCGGTCATTGGCGGTGGGATTGCATTAGGCAATGTCTTACTGCCAGGATTAATTAAACGCGATTTCCCTCATTCCGTCGCCAGACTTACCGGCGCata                                                                                                                                                       <  1:286851/250‑1 (MQ=255)
                                                                       ttattGGCCTTTGCGCTAATCTCACCTTTGGCTGCCCCGGTAGCGCAACGTTTTGGTATGGAACGTAGCCTGTTTGCCGCGTTACTTTTGATCTGTGCTGGTATCGCAATTCGCTCTCTCCCTTCGCCTTACTTATTATTTGGCGGTACAGCGGTCATTGGCGGTGGGATTGCATTAGGCAATGTCTTACTGCCAGGATTAATTAAACGCGATTTCCCTCATTCCGTCGCCAGACTTACCGGCGCATAtt                                                                                                                                                     <  1:311893/250‑1 (MQ=255)
                                                                        tattGGCCTTTGCGCTAATCTCACCTTTGGCTGCCCCGGTAGCGCGACGTTTTGGTATGGAACGTAGCCTGTTTGCCGCGTTACTTTTGATCTGTGCTGGTATCGCAATTCGCTCTCTCCCTTCGCCTTACTTATTATTTGGCGGTACAGCGGTCATTGGCGGTGGGGTTGCAATAGGGAATGTGTTTCTTCCAGGAATAATTTAACGCGGATTCCCTCTTTTCGTCGCCCGACTTACCGGCCGATATTc                                                                                                                                                    >  2:372745/1‑250 (MQ=255)
                                                                                 ttGCGCTAATCTCACCTTTGGCTGCCCCGGTAGCGCGACGTTTTGGTATGGAACGTAGCCTGTTTGCCGCGTTACTTTTGATCTGTGCTGGTATCGCAATTCGCTCTCTCCCTTCGCCTTACTTATTATTTGGCGGTACAGCGGTCATTGGCGGCGGGGTTGCCTTATGGCATGTCTTTCCTCCCGGTTTTATTTAACGCGGGTTCCCTCATTCCCTGCCCCGACTTTACGCCGCACTTTCCCttgccct                                                                                                                                           >  2:290014/1‑244 (MQ=255)
                                                                                                cTTTGGCTGCCCCGGTAGCGCGACGTTTTGGTATGGAACGTAGCCTGTTTGCCGCGTTACTTTTGATCTGTGCTGGTATCGCAATTCGCTCTCTCCCTTCGCCTTACTTATTATTTGGCGGTACAGCGGTCATTGGCGGTGGGATTGCATTAGGCAATGTCTTACTGCCAGGATTTATTAAACGCGATTTTCCTCATTCCGTCGCCAGACTTACCGGCGCATATTCCCTGACAATGGGAGCTGCAGCGGc                                                                                                                            >  1:52789/1‑250 (MQ=255)
                                                                                                     gCTGCCCCGGTAGCGCGACGTGTTGGTATGGAACGTAGCCTGTTTGCCGCGTTACTTTTGATCTGTGCTGGTATCGCAATTCGCTCTCTCCCTTCGCCTTACTTATTATTTGGCGGTACAGCGGTCATTGGCGGTGGGATTGCATTAGGCAATGTCTTACTGCCAGGATTAATTAAACGCGATTTCCCTCATTCCGTCGCCAGACTTACCGGCGCATATTCCCTGACAATGGGAGCTGCAGCGGCACTgg                                                                                                                       <  2:619331/250‑1 (MQ=255)
                                                                                                                            tGGTATGGAACGTAGCCTGTTTGCCGCGTTACTTTTGATCTGTGCTGGTATCGCAATTCGCTCTCTCCCTTCGCCTTACTTATTATTTGGCGGTACAGCGGTCATTGGCGGTGGGGTTTCATTAGGCAATGTCTTTCTTCCAGGATTTATTAAACGCGATTTCCCTCATTCCCTCGCCAGACTTACCGGCGCATATTCCCCGTCAATCGGAGCTGCAACGGCACCGGGAGCTGCTATGGTCGTGCCCCtc                                                                                                >  2:21341/1‑249 (MQ=255)
                                                                                                                                 tGGAACGTAGCCTGTTTGCCGCGTTACTTTTGATCTGTGCTGGTATCGCAATTCGCTCTCTCCCTTCGCCTTACTTATTATTTGGCGGTACAGCGGTCATTGGCGGTGGGATTGCATTAGGCAATGTCTTACTGCCAGGATTAATTAAACGCGATTTCCCTCATTCCGTCGCCAGACTTACCGGCGCATATTCCCTGACAATGGGAGCTGCAGCGGCACTGGGATCGGCTATGGTCGTGCCGCTGGCtt                                                                                            <  2:600627/249‑1 (MQ=255)
                                                                                                                                     aCGTAGCCTGTTTGCCGCGTTACTTTTGATCTGTGCTGGTATCGCAATTCGCTCTCTCCCTTCGCCTTACTTATTATTTGGCGGTACAGCGGTCATTGGCGGTGGGATTGCTTTAGGCAATGTCTTACTGCCCGGATTAATTAAAAGCGATTTCCCTCCTTTCGTCGCCCGACTTACCGGCGCATATTCCCTGACAATGGGGGCTGCAGCGGCCCTGGGGTCGGCGATGGTCGTGCCGCCGGGttttatc                                                                                       >  2:387433/1‑246 (MQ=255)
                                                                                                                                      cGTAGCCTGTTTGCCGCGTTACTTTTGATCTGTGCTGGTATCGCAATTCGCTCTCTCCCTTCGCCTTACTTATTATTTGGCGGTACAGCGGTCATTGGCGGTGGGATTGCATTAGGCAATGTCTTACTGCCAGGATTAATTAAACGCGATTTCCCTCATTCCGTCGCCAGACTTACCGGCGCATATTCCCTGACAATGGGAGCTGCAGCGGCACTGGGATCGGCTATGGTCGTGCCGCTGGCTTTGAACg                                                                                      <  1:5733/250‑1 (MQ=255)
                                                                                                                                       gTAGCCTGTTTGCCGCGTTACTTTTGATCTGTGCTGGTATCGCAATTCGCTCTCTCCCTTCGCCTTACTTATTATTTGGCGGTACAGCGGTCATTGGCGGTGGGGTTGCATTAGGCAATGGCTTACTGCCAGGGTTAATTAAAAGCGATTTTCCTCATTCCGTCGCCCGACTTACCGGCGCATATTTCCTGACCATGGGGGCTGCAGCGGCACTGGGGTCGGCCATGGTCGTGCCGCCGGCTTTGAAAgg                                                                                     >  1:169797/1‑250 (MQ=255)
                                                                                                                                           ccTGTTTGCCGCGTTACTTTTGATCTGTGCTGGTATCGCAATTCGCTCTCTCCCTTCGCCTTACTTATTATTTGGCGGTACAGCGGTCATTGGCGGTGGGGTTGCCTTAGGCAATGTCTTACTGCCAGGATTAATTAAACGCGATTTCCCTCATTCCGTCGCCCGACTTACCGGCGCATATTCCCCTACCATTGGAGCTCCCGCGGCACTGGGGTCGGCCATGGTCCTGCCCCCGTCttttggcgggttt                                                                                 >  2:422986/1‑240 (MQ=255)
                                                                                                                                             tGTTTGCCGCGTTACTTTTGATCTGTGCTGGTATCGCAATTCGCTCTCTCCCTTCGCCTTACTTATTATTTGGCGGTACAGCGGTCATTGGCGGTGGGGTTGGATTAGGCAATGTCTTACTGCCAGGGTTAATTAAACGCGATTTCCCTCATTCCGTCGCCCGACTTACCGGCGCCTATTCCCCGACCATGGGGGCTGCAGCGGGACCTGGATCGGCCCTGGGCTGGCCGCCGGCTTTGATCGGgttttg                                                                               >  2:316405/1‑248 (MQ=255)
                                                                                                                                                          aCTTTTGATCTGTGCTGGTATCGCAATTCGCTCTCTCCCTTCGCCTTACTTATTATTTGGCGGTACAGCGGTCATTGGCGGTGGGATTTCATTAGGCAATGTCTTACTGCCCGGAGTAATTAAACGCCATTTCCCTTATTTCGTCGCCAGACTTAACGGCGCATATTTCCCGACAATTGGAGCCGCAGCGGCACCGGGATCGGCTATGGTCGTGCCGATGGCTTTTAACGGTGTTGGCTGGCCAGGcgcg                                                                  >  1:348205/1‑250 (MQ=255)
                                                                                                                                                                gATCTGTGCTGGTATCGCAATTCGCTCTCTCCCTTCGCCTTACTTATTATTTGGCGGTACAGCGGTCATTGGCGGTGGGGTTGCATTTGGCAATGTCTTACTGCCAGGATTAATTAAACGCGCTTTCCCTCATTCCGTCGCCAGACTTACCGGCGCATATTCCCTCACAATGGGAGCTGCAGCGGCACTGGGATCGGCTATGGTCGTGCCGCTGGCTTTGAACGGGTTTTGCTGGCAAGGGGCGTTtctc                                                            >  2:171553/1‑250 (MQ=255)
                                                                                                                                                                gATCTGTGCTGGTATCGCAATTCGCTCTCTCCCTTCGCCTTACTTATTATTTGGCGGTACAGCGGTCATTGGCGGTGGGGTTGCATTAGGCAATGTCTTACTGGCAGGGTTAATTAAAAGCGATTTTCCTCATTCCGTCGCCAGACTTTCCGGGGCATATTTCCTGAAAATGGGGGCTGCAGCGGGACTGGGATCGGGCATGGGCGGGCCGCGGGGTTTGAAAGGGTTTGGCTGGGAAGGGGCGGTGGTc                                                            >  1:34346/1‑250 (MQ=255)
                                                                                                                                                                      tgCTGGTATCGCAATTCGCTCTCTCCCTTCGCCTTACTTATTATTTGGCGGTACAGCGGTCATTGGCGGTGGGATTGCATTAGGCAATGTCTTACTGCCAGGATTAATTAAACGCGATTTCCCTCATTCCGTCGCCAGACTTACCGGCGCATATTCCCTGACAATGGGAGCTGCAGCGGCACTGGGATCGGCTATGGTCGTGCCGCTGGCTTTGAACGGTTTTGGCTGGCAAGGCGCGTTGCTCATg                                                         <  1:425853/247‑1 (MQ=255)
                                                                                                                                                                               cGCAATTCGCTCTCTCCCTTCGCCTTACTTATTATTTGGCGGTACAGCGGTCATTGGCGGTGGGGTTGCATTAGGCAATGTCTTACTGCCAGGATTAATTAAACGCGATTTCCCTCATTCCGTCGCCAGACTTACCGGCGCATATTCCCTGACAATGGGAGCTGCAGCGGCACTGGGATCGGCTATGGGCGTGCCGCTGGCTTTGGACGGGTTTGGCTGGCAAGGCGCGGTGCTCATGCTGGTGTGgttt                                             >  1:59473/1‑250 (MQ=255)
                                                                                                                                                                                gCAATTCGCTCTCTCCCTTCGCCTTACTTATTATTTGGCGGTACAGCGGTCATTGGCGGTGGGATTGCATTAGGCAATGTCTTACTGCCAGGATTAATTAAACGCGATTTCCCTCATTCCGTCGCCAGACTTACCGGCGCATATTCCCTGACAATGGGAGCTGCAGCGGCACTGGGATCGGCTATGGTCGTGCCGCTGGCTTTGAACGGTTTTGGCTGGCAAGGCGCGTTGCTCATGCTGATGTGtttt                                             <  1:75745/249‑1 (MQ=255)
                                                                                                                                                                                                    gCCTTACTTATTATTTGGCGGTACAGCGGTCATTGGCGGTGGGATTGCATTAGGCAATGTCTTACTGCCAGGATTAATTAAACGCGATTTCCCTCATTCCGTCGCCAGACTTACCGGCGCATATTCCCTGACAATGGGAGCTGCAGCGGCACTGGGATCGGCTATGGTCGTGCCGCTGGCTTTGAACGGTTTTGGCTGGCAAGGCGCGTTGCTCATGCTGATGTGTTTTCCTCTGCTGGCTCttttttt                         <  2:52789/249‑1 (MQ=255)
                                                                                                                                                                                                         acttaTTATTTGGCGGTACAGCGGTCATTGGCGGTGGGATTGCATTAGGCAATGTCTTACTGCCAGGATTAATTAAACGCGATTTCCCTCATTCCGTCGCCAGACTTACCGGCGCATATTCCCTGACAATGGGAGCTGCAGCGGCACTGGGATCGGCTATGGTCGTGCCGCTGGCTTTGAACGGTTTTGGCTGGCAAGGCGCGTTGCTCATGCTGATGTGTTTTCCTCTGCTGGCTCTTTTTTTATgg                     <  1:190634/248‑1 (MQ=255)
                                                                                                                                                                                                               tattTGGCGGTACAGCGGTCATTGGCGGTGGGGTTTCATTAGGCAATGTCTTACTGCCAGGATTTATTAAAAGCGATTTTCCTCATTCCCTCGCCAGACTTACCGGCGCATATTTCCTGACAATGGGAGCTGCAGCGGCACTGGGATCGGCTATGGTCGGGCCGCTGGCTTTGAACGGTTTTGGCTGGCAAAGCGCGGTGCTCCTGCTGGTGTGTTTTTCTCTGCTGGCTCTTTTTTTTTTGCTGcccc              >  1:167628/1‑247 (MQ=255)
                                                                                                                                                                                                                     gCGGTACAGCGGTCATTGGCGGTGGGGTTGGATTAGGCAATGTCTTACTGCCAGGGTTTATTAAACGCGATTTTCCTCATTCCCTCGCCCGACTTACCGGCGCATATTCCCTGACAATGGGAGCTGCCGCGGCACTGGGGTCGGCTATGGTCGTGCCGCTGGCGTTTGACGGGTTTGGGTGGCAAAGGGCGGTTCTCCTGCTGGTGTGTTTTCCTCTGCTGGCTCTTTTTTTTTTGCTGCcaccgagggg       >  2:374051/1‑243 (MQ=255)
                                                                                                                                                                                                                           cAGCGGTCATTGGCGGTGGGATTGCATTAGGCAATGTCTTACTGCCAGGATTAATTAAACGCGATTTCCCTCATTCCGTCGCCAGACTTACCGGCGCATATTCCCTGACAATGGGAGCTGCAGCGGCACTGGGATCGGCTATGGTCGTGCCGCTGGCTTTGAACGGTTTTGGCTGGCAAGGCGCGTTGCTCATGCTGATGTGTTTTCCTCTGCTGGCTCTTTTTTTATGGCTGCCACAGTGGCGAAGTc  <  2:546559/249‑1 (MQ=255)
                                                                                                                                                                                                                           cAGCGGTCATTGGCGGTGGGATTGCATTAGGCAATGTCTTACTGCCAGGATTAATTAAACGCGATTTCCCTCATTCCGTCGCCAGACTTACCGGCGCATATTCCCTGACAATGGGAGCTGCAGCGGCACTGGGATCGGCTATGGTCGTGCCGCTGGCTTTGAACGGTTTTGGCTGGCAAGGCGCGTTGCTCATGCTGATGTGTTTTCCTCTGCTGGCTCTTTTTTTATGGCTGCCACAGTGGCGAAGTc  <  1:551322/249‑1 (MQ=255)
                                                                                                                                                                                                                                               |                                                                                                                                                                                                                                    
CGTTACTGGATACGATTCGTTCCGCTTACTCGCTGACGACAGCGCAAACCGGCTTATTGACCACCCTGCCATTATTGGCCTTTGCGCTAATCTCACCTTTGGCTGCCCCGGTAGCGCGACGTTTTGGTATGGAACGTAGCCTGTTTGCCGCGTTACTTTTGATCTGTGCTGGTATCGCAATTCGCTCTCTCCCTTCGCCTTACTTATTATTTGGCGGTACAGCGGTCATTGGCGGTGGGATTGCATTAGGCAATGTCTTACTGCCAGGATTAATTAAACGCGATTTCCCTCATTCCGTCGCCAGACTTACCGGCGCATATTCCCTGACAATGGGAGCTGCAGCGGCACTGGGATCGGCTATGGTCGTGCCGCTGGCTTTGAACGGTTTTGGCTGGCAAGGCGCGTTGCTCATGCTGATGTGTTTTCCTCTGCTGGCTCTTTTTTTATGGCTGCCACAGTGGCGAAGTC  >  NZ_CP009273/1870033‑1870500

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑