| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NZ_CP009273 | 295,837 | 0 | A | G | 35.5% | 74.3 / 15.3 | 63 | L270P (CTC→CCC) | paoC | aldehyde oxidoreductase molybdenum‑binding subunit PaoC |
| Reads supporting (aligned to +/- strand): ref base A (8/32); new base G (19/3); total (27/36) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 4.82e-07 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
| Rejected as consensus: Frequency below/above cutoff threshold. | |||||||||||
GCATGGCGTTCCCTTCCGGCAAATCAAGCGTGGCGAGCCGCAGGCCGGTATGACGATTCGCCCCGGCGTAGAGTAATTCGCTTTGCTGTACCGCCGTTTCCGGCGTGCCGCCGGGCAGGTTTCCAGACCAGCTTTCATGTGAGATAGCGGTGATTTTCCCGCTCTGGTCGGCACCGATACGCAAGTGCTGAAGGGTGGCGGGGCGGTGCGTGGTGTTATTGGGAATAGAGGGGC‑GGGGGAGCATCACTTTAACCGGACGTTTCACCGCTCGGGCGGCGAGGGCCGCCAGCAGCGCATCGCTTCT‑CAGGAACAGCTTGCCGCCAAACCCTCCGCCGATATACGGGGAGATAATACGCACATTCTCCACGGGAACTTTCAGCGTTTTTGCCAGATCGGTGCGGCACCAGTCAATCATCTGATTTGAGGTCCAGAGGGTAAGCTTATTTCCATCCCAGACGGCCATCGAGGCATGCGGCTCCATCGCCAT > NZ_CP009273/295598‑296084 | gctgggCGTCCCCTCCCGGAAAATCAAGGGGGGGGGGCCGCGGGCCGGTATGACGTTTCGCCCGGGCGTAGAGTAATTCGCTTTGCTGTACCGCCGTTTCCGGCGTGCCGCCGGGCAGGTTTCCAGACCAGCTTTCATGTGAGATAGCGGTGATTTTCCCGCTCTGGTCGGCACCGATACGCAAGTGCTGAAGGGTGGCGGGGCGGTGCGTGGTGTTATTGGGAATAGAGGGGC‑GGGGGAGCATCACttt < 1:819467/246‑1 (MQ=255) caTGGCGTTCCCTTCCGGCAAATCAAGCGTGGCGAGCCGCAGGCCGGTATGACGATTCGCCCCGGCGTAGAGTAATTCGCTTTGCTGTACCGCCGTTTCCGGCGTGCCGCCGGGCAGGTTTCCAGACCAGCTTTCATGTGAGATAGCGGTGATTTTCCCGCTCTGGTCGGCACCGATACGCAAGTGCTGAAGGGTGGCGGGGCGGCGCGTGGTGTTATTGGGAATAGAGGGGC‑GGCGGGGGAACACtttt > 2:779149/1‑249 (MQ=255) tGGGGTCCCCTCCGGGCAAATCAGGGGGGGCGGGCCGCGGGCCGGTATGGCGATCCCCCCCGGCGTGGATTATTCCGTTTTGTTGTACCGCCGTTTCCGGCGTGCCGCCGGGCAGGTTTCCAGACCAGCTTTCATGTGAGATAGCGGTGATTTTCCCGCTCTGGTCGGCACCGATACGCAAGTGCTGAAGGGTGGCGGGGCGGTGCGTGGTGTTATTGGGAATAGAGGGGC‑GGGGGAGCATCACTTTAAc < 2:312749/250‑1 (MQ=255) gTTCCCTTCCGGCAAATCAAGCGTGGCGAGCCGCAGGCCGGTATGACGATTCGCCCCGGCGTAGAGTAATTCGCTTTGCTGTACCGCCGTTTCCGGCGTGCCGCCGGGCAGGTTTCCAGACCAGCTTTCATGTGAGATAGCGGTGATTTTCCCGCTCTGGTCGGCACCGATACGCAAGTGCTGAAGGGTGGCGGGGCGGTGCGTGGTGTTATTGGGAATAGAGGGGC‑GGGGGGGGGTCACTTTTACCggg > 2:821596/1‑249 (MQ=255) ccTTCCGGCAAATCAAGCGTGGCGAGCCGCAGGCCGGTATGACGATTCGCCCCGGCGTAGAGTAATTCGCTTTGCTGTACCGCCGTTTCCGGCGTGCCGCCGGGCAGGTTTCCAGACCAGCTTTCATGTGAGATAGCGGTGATTTTCCCGCTCTGGTCGGCACCGATACGCAAGTGCTGAAGGGTGGCGGGGCGGTGCGTGGTGTTATTGGGAATAGAGGGGC‑GGGGGGGGATCCCTTTAAACgggaggt > 1:389364/1‑245 (MQ=255) ccGGAAAAACAAGCGTGGCGGGCCGCAGGCCGGTAGGACGATTCGCCCCGGCGTAGAGTAATTCGCTTTGCTGTACCGCCGTTTCCGGCGTGCCGCCGGGCAGGTTTCCAGACCAGCTTTCATGTGAGATAGCGGTGATTTTCCCGCTCTGGTCGGCACCGATACGCAAGTGCTGAAGGGTGGCGGGGCGGTGCGTGGTGTTATTGGGAATAGAGGGGC‑GGGGGAGCATCACTTTAACCGGACGTTTCAc < 1:781380/250‑1 (MQ=255) ggCAAATCAAGCGTGGCGAGCCGCAGGCCGGTATGACGATTCGCCCCGGCGTAGAGTAATTCGCTTTGCTGTACCGCCGTTTCCGGCGTGCCGCCGGGCAGGTTTCCAGACCAGCTTTCATGTGAGATAGCGGTGATTTTCCCGCTCTGGTCGGCACCGATACGCAAGTGCTGAAGGGTGGCGGGGCGGTGCGTGGGGTTATTGGGAATAGAGGGGC‑GGGGGGGGATCACTTTAAACGGGCGGTTCACCg > 1:185711/1‑250 (MQ=255) cAAATCAAGCGTGGCGAGCCGCAGGCCGGTATGACGATTCGCCCCGGCGTAGAGTAATTCGCTTTGCTGTACCGCCGTTTCCGGCGTGCCGCCGGGCAGGTTTCCAGACCAGCTTTCATGTGAGATAGCGGTGATTTTCCCGCTCTGGTCGGCACCGATACGCAAGTGCTGAAGGGTGGCGGGGCGGTGCGTGGTGTTATTGGGAATAGAGGGGCGGGGGGGGAATCCCTTTAACGGGCCGTTTCAcccc > 2:860020/1‑248 (MQ=255) aaaaTCAGGCGGGGCGAGCCGCAGGCCGGTATGGCGATTCGCCCCGGCGTAGATTAATTCGCTTTGCTGTACCGCCGTTTCCGGCGTGCCGCCGGGCAGGTTTCCAGACCAGCTTTCATGTGAGATAGCGGTGATTTTCCCGCTCTGGTCGGCACCGATACGCAAGTGCTGAAGGGTGGCGGGGCGGTGCGTGGTGTTATTGGGAATAGAGGGGC‑GGGGGAGCATCACTTTAACCGGACGTTTCACCGCt < 1:331989/249‑1 (MQ=255) ggTATGACGATTCGCCCCGGCGTAGAGTAATTCGCTTTGCTGTACCGCCGTTTCCGGCGTGCCGCCGGGCAGGTTTCCAGACCAGCTTTCATGTGAGATAGCGGTGATTTTCCCGCTCTGGTCGGCACCGATACGCAAGTGCTGAAGGGTGGCGGGGCGGTGCGTGGTGTTATTGGGAATAGAGGGGC‑GGGGGGGGATTACTTTAACCGGACGTTTTACCGCCCCGGCGGCGGGGGGCGGCAGCAgcgc > 1:382164/1‑249 (MQ=255) gtgtgccgtttCGCCCGGGGGTAGAGTATTGCGCTTTGCTGTACCGCCGTTTCCGGCGTGCCGCCGGGCAGGTTTCCAGACCAGCTTTCATGTGAGATAGCGGTGATTTTCCCGCTCTGGTCGGCACCGATACGCAAGTGCTGAAGGGTGGCGGGGCGGTGCGTGGTGTTATTGGGAATAGAGGGGC‑GGGGGAGCATCACTTTAACCGGACGTTTCACCGCTCGGGCGGCGAGGGCCGCCAGCAGCGCAt < 2:700957/241‑1 (MQ=255) tGACGATTCGCCCGGGCGTAGGGTATTTCGTTTTGCGGTACCGCCGTTTCCGGCGTGCCGCCGGGCAGGTTTCCAGACCAGCTTTCATGTGAGATAGCGGTGATTTTCCCGCTCTGGTCGGCACCGATACGCAAGTGCTGAAGGGTGGCGGGGCGGTGCGTGGTGTTATTGGGAATAGAGGGGC‑GGGGGAGCATCACTTTAACCGGACGTTTCACCGCTCGGGCGGCGAGGGCCGCCAGCAGCGCATCg < 1:579942/249‑1 (MQ=255) tGACGATTCGCCCCGGCGTAGAGTAATTCGCTTTGCTGTACCGCCGTTTCCGGCGTGCCGCCGGGCAGGTTTCCAGACCAGCTTTCATGTGAGATAGCGGTGATTTTCCCGCTCTGGTCGGCACCGATACGCAAGTGCTGAAGGGTGGCGGGGCGGTGCGTGGTGTTATTGGGAATAGAGGGGC‑GGGGGGGGATCCCTTTAACCGGGCGGTTTTCCGCTCGGGCGGGGGGGGGCGCCAGCcgcggggtcg > 1:804514/1‑244 (MQ=255) tGACGATTCGCCCCGGCGTAGAGTAATTCGCTTTGCTGTACCGCCGTTTCCGGCGTGCCGCCGGGCAGGTTTCCAGACCAGCTTTCATGTGAGATAGCGGTGATTTTCCCGCTCTGGTCGGCACCGATACGCAAGTGCTGAAGGGTGGCGGGGCGGTGCGTGGGGGTAGTGGGAATAGAGGGGCGGGGGGGGGACCACTTTTACGGGAGGTTT‑ACCGCCCGGGGGGCGGGGGGCGACcgcagccgcggcg > 2:548416/1‑243 (MQ=255) gccggtgcGCCCCGGCGTAGAGTAATTCGTTTTGCTGGACCGCCGTTTCCGGCGTGCGGCCGGGCAGGTTTCCAGACCAGCTTTCATGTGAGATAGCGGTGATTTTCCCGCTCTGGTCGGCACCGATACGCAAGTGCTGAAGGGTGGCGGGGCGGTGCGTGGTGTTATTGGGAATAGAGGGGC‑GGGGGAGCATCACTTTAACCGGACGTTTCACCGCTCGGGCGGCGAGGGCCGCCAGCAGCGCATCGCt < 2:799110/243‑1 (MQ=255) tccccccGGGGTAGGGTATTCCGCTTGGCTGACCCGCCGTTTCCGGCGTGCCGCCGGGCAGGTTTCCAGACCAGCTTTCATGTGAGATAGCGGTGATTTTCCCGCTCTGGTCGGCACCGATACGCAAGTGCTGAAGGGTGGCGGGGCGGTGCGTGGTGTTATTGGGAATAGAGGGGC‑GGGGGAGCATCACTTTAACCGGACGTTTCACCGCTCGGGCGGCGAGGGCCGCCAGCAGCGCATCGCTtct‑c < 2:185711/245‑1 (MQ=255) tCGCCCCGGCGTAGAGTAATTCGCTTTGCTGTACCGCCGTTTCCGGCGTGCCGCCGGGCAGGTTTCCAGACCAGCTTTCATGTGAGATAGCGGTGATTTTCCCGCTCTGGTCGGCACCGATACGCAAGTGCTGAAGGGTGGCGGGGCGGTGCGTGGTGTTATTGGGAATAGAGGGGC‑GGGGGGGCATCACCTTTACCGGACGTTTCTCCGCGCGGGCGGGGAGGGCCGCCCGCACCGCACCGCCtct‑ccg > 2:86922/1‑248 (MQ=255) cccGGCGTAGAGTAATTCGCTTTGCTGTACCGCCGTTTCCGGCGTGCCGCCGGGCAGGTTTCCAGACCAGCTTTCATGTGAGATAGCGGTGATTTTCCCGCTCTGGTCGGCACCGATACGCAAGTGCTGAAGGGTGGCGGGGCGGTGCGTGGTGTTATTGGGAATAGAGGGGC‑GGGGGAGGAACACTTTATACGGGCGTTTCTCCCCTCGGGGGGGGGGGGCCGGCCGCAACGCCTCCGTTCT‑Catgtga > 2:737299/1‑245 (MQ=255) gTAGAGTAATTCGCTTTGCTGTACCGCCGTTTCCGGCGTGCCGCCGGGCAGGTTTCCAGACCAGCTTTCATGTGAGATAGCGGTGATTTTCCCGCTCTGGTCGGCACCGATACGCAAGTGCTGAAGGGTGGCGGGGCGGTGCGTGGTGTTATTGGGAATAGAGGGGC‑GGGGGGGCATCACTTTAACCGGGCGGTTCACCGCTCGGGCGGCGAGGGCCGCCAGCAGCGCATCGCTTCT‑CAGGAACAGCTTg > 1:417713/1‑250 (MQ=255) tttGCTGTACCGCCGTTTCCGGCGTGCCGCCGGGCAGGTTTCCAGACCAGCTTTCATGTGAGATAGCGGTGATTTTCCCGCTCTGGTCGGCACCGATACGCAAGTGCTGAAGGGTGGCGGGGCGGTGCGTGGTGTTATTGGGAATAGAGGGGC‑GGGGGGGCATCACTTTTACCGGACGTTTCACCGCTCGGGCGGCGAGGGCCGCCAGCCGCGCATCGCTTCT‑CAGGAACAGCTTTCCGCCAAACCCTcc > 1:876623/1‑250 (MQ=255) ttgcgcggccgcctTTTCCGGCGGGCCGCCGGGCAGGTTTCCAGACCAGCTTTCATGTGAGATGGCGGTGATTTTCCCGCTCTGGTCGGCACCGATACGCAAGTGCTGAAGGGTGGCGGGGCGGTGCGTGGTGTTATTGGGAATAGAGGGGC‑GGGGGAGCATCACTTTAACCGGACGTTTCACCGCTCGGGCGGCGAGGGCCGCCAGCAGCGCATCGCTTCT‑CAGGAACAGCTTGCCGCCAAACCCTcc < 2:593597/241‑1 (MQ=255) tGCTGTACCGCCGTTTCCGGCGTGCCGCCGGGCAGGTTTCCAGACCAGCTTTCATGTGAGATAGCGGTGATTTTCCCGCTCTGGTCGGCACCGATACGCAAGTGCTGAAGGGTGGCGGGGCGGTGCGTGGTGTTATTGGGAATAGAGGGGC‑GGGGGAGCATCACTTTAACCGGACGTTTCACCGCTCGGGCGGCGAGGGCCGCCAGCAGCGCATCGCTTCT‑CAGGAACAGCTTGCCGCCAAACCCTccg < 1:250683/249‑1 (MQ=255) tACCGCCGTTTCCGGCGTGCCGCCGGGCAGGTTTCCAGACCAGCTTTCATGTGAGATAGCGGTGATTTTCCCGCTCTGGTCGGCACCGATACGCAAGTGCTGAAGGGTGGCGGGGCGGTGCGTGGTGTTATTGGGAATAGAGGGGC‑GGGGGGGGATCACCTTTACCGGACGGTTTACCGCCCCGGCGGCGGGGGCCGCCCGCCGCGCCTCGCCTCTCCGGGAACA‑CTTGGCGCCCAACCCCccgccgctt > 1:60440/1‑247 (MQ=255) cccccgTTCCCGGCGTGCGGCCGGGCAGGTTTCCAGACCAGCTTTCAGGTGGGAGGGCGGGGATTTCCCCGTTCTGGTCGGCCCCGTACCGCAGGTGGGGAGGGGGGGGGGGGGGGGGCGGGGTGTAATTGGGAATGGAGGGGC‑GGGGGAGCTTCACTTTAACCGGACGTTTCCCCGCTCGGGCGGCGAGGGCCGCCGGCAGCGCATCGCTTCT‑CAGGAACAGCTTGCCGCCAACCCCTCCGCCGAtata < 2:826425/247‑1 (MQ=255) gccgTTTCCGGCGTGCCGCCGGGCAGGTTTCCAGACCAGCTTTCATGTGAGATAGCGGTGATTTTCCCGCTCTGGTCGGCACCGATACGCAAGTGCTGAAGGGTGGCGGGGCGGTGCGTGGTGTTATTGGGAATAGAGGGGC‑GGGGGAGCATCACTTTAACCGGACGTTTCACCGCTCGGGCGGCGAGGGCCGCCAGCAGCGCATCGCTTCT‑CAGGAACAGCTTGCCGCCAAACCCTCCGCCGATATACg < 1:571484/250‑1 (MQ=255) ttCCGGCGTGCCGCCGGGCAGGTTTCCAGACCAGCTTTCATGTGAGATAGCGGTGATTTTCCCGCTCTGGTCGGCACCGATACGCAAGTGCTGAAGGGTGGCGGGGCGGGGCGGGGTGTTATTGGGAATAGAGGGGC‑GGGGGGGCAGCACTTTTACCGGCCGGGTCTCCGCACGGGGGGCGGGGGCCGCCAACCGCGCGACCCTTTC‑CACGGACATCTTGCCCCCAACCCCCccgccgtcctaaggggc > 2:103438/1‑238 (MQ=255) ggCGTGCCGCCGGGCAGGTTTCCAGACCAGCTTTCATGTGAGATAGCGGTGATTTTCCCGCTCTGGTCGGCACCGATACGCAAGTGCTGAAGGGTGGCGGGGCGGTGCGTGGTGTTATTGGGAATAGAGGGGC‑GGGGGGGCATCACTTTAAACGGACGGTTCACCGCTCGGGCGGCGAGGGCCGGCAGCAGCGCCTCGCCTCT‑TAAGAAAAACTTGCCGCCAAACCCTCCGCCGATATTCGGGGGGata > 1:769254/1‑249 (MQ=255) gCGTGCGGCCGGGATGGTTTCCAGCCCAGTTTTCATGTGAGATGGGGGGGATGTCCCCGCTCTGGGCGGCACCGATCCGCAGGTGCTGAGGGGGGGCGGGGCGGTGCGTGGTGTTATTGGGAATAGAGGGGG‑GGGGGAGCATCACTTTACCCGGCCGTTTCCCCGCTCGGGCGGCGAGGGCCGCCAGCAGCGCATCGCTTCT‑CAGGAACAGCTTGCCGCCAAACCCTCCGCCGATATACGGGGAGataat < 2:45687/250‑1 (MQ=255) cGTGCCGCGGGGCGGGTTTCCAGCCCGGTTTCCATGGGGGTGAGCGTGGTTTTCCCCGTCCTGGTCGGACCCTATACGCAGGTGCTGAAGGGTGGGGGGGGGGTGGGTGGTGTTATTGGGAATAGAGGGGC‑GGGGGAGCATCCCTTTAACCGGACGTTTCACCGCTCGGGCGGCGAGGGCCGCCAGCAGCGCATCGCTTCT‑CAGGAACAGCTTGCCGCCAACCCCTCCGCCGATATACGGGGAGataata < 2:53645/250‑1 (MQ=255) gTGCCGCGGGGCAGGTTTCCAGACCAGCTTTAATGTGAGATAGGGGTGATTTCCCCGCTCGGGTCGGAACCGATACGCAAGTGCTGAGGGGGGGCGGGGCGGGGCGTGGTTTTATTGGGAATAGGGGGGC‑GGGGGAGCATCACTTTAACCGGACGTTTCACCGCTCGGGCGGCGAGGGCCGCCAGCAGCGCATCGCTTCT‑CAGGAACAGCTTGCCGCCAAACCCTCCGCCGATATACGGGGAGATAATAc < 2:417713/250‑1 (MQ=255) gacgGGCGGTTTTCCAGCCCAGTTTTCATGTGAGATAGCGGTGATTTCCCCGCTCTGGCCGGCACCGATAGGCAAGTGCTGAAGGGTGGCGGGGCGGGGCGTGGTGTTATGGGGAATAGAGGGGC‑GGGGGGGCATCACTTTACCCGGCCGTTTCCCCGCTCGGGCGGCGAGGGCCGCCAGCAGCGCATCGCTTCT‑CAGAAACAGCTTGCCGCCAAACCCTCCGCCGATATACGGGGAGATAATACGcaca < 2:92821/248‑1 (MQ=255) ggCGGGTTCCCAGCCCAGCTTTCAGGTGAGATGGGGGGGATTTCCCCGCTCGGGTCGGCACCGATACGCAAGTGCTGAGGGGGGGCGGGGCGGTGCGTGGTGTTATGGGAAATAGAGGGGC‑GGGGGAGCATCCCTTTAACCGGACGTTTCACCGCTCGGGCGGCGAGGGCCGCCAGCAGCGCATCGCTTCT‑CAGGAACAGCTTGCCGCCAAACCCTCCGCCGATATACGGGGAGATAATACGCACATtct < 2:480122/250‑1 (MQ=255) ggCAGGTTTCCAGACCAGCTTTCATGTGAGATAGCGGTGATTTTCCCGCTCTGGTCGGCACCGATACGCAAGTGCTGAAGGGTGGCGGGGCGGTGCGTGGTGTTATTGGGAATAGAGGGGC‑GGGGGAGCATCACTTTAACCGGACGTTTCACCGCTCGGGCGGCGAGGGCCGCCAGCAGCGCATCGCTTCT‑CAGGAACAGCTTGCCGCCAAACCCTCCGCCGATATACGGGGAGATAATACGCACATtct < 1:668147/250‑1 (MQ=255) tttCCAGACCAGCTTTCATGTGAGATAGCGGTGATTTTCCCGCTCTGGTCGGCACCGATACGCAAGTGCTGAAGGGTGGCGGGGCGGTGCGTGGTGTTATTGGGAATAGAGGGGC‑GGGGGAGCATCACTTTAACCGGACGTTTCACCGCTCGGGGGGCGAGGGCCGCCAGCAGCGCATCGCTTCT‑CAGGAACAGCTTGCCGCCAAAACCTCCGCCGATATACGGGGAGATAATACGCACAATCTCCACgg > 1:817577/1‑250 (MQ=255) ccAGACCAGCTTTCAGGTGAGATAGCGGGGATTTTCCCGCTCTGGTGGGCACCGATACGCAAGTGTTGAGGGGTGGCGGGGCGGTGCGTGGTGTTATTGGGAATAGAGGGGC‑GGGGGAGCATCACTTTACCCGGACGTTTCACCGCTCGGGCGGCGAGGGCCGCCAGCAGCGCATCGCTTCT‑CAGGAACAGCTTGCCGCCAAACCCTCCGCCGATATACGGGGAGATAATACGCACATTCTCCACGGGaa < 2:122022/250‑1 (MQ=255) cAGACCAGCTTTCATGTGAGATAGCGGTGATTTTCCCGCTCTGGTCGGCACCGATACGCAAGTGCTGAAGGGTGGCGGGGCGGTGCGTGGTGTTATTGGGAATAGAGGGGC‑GGGGGGGCATCACTTTTAACGGACGTTTTACCGCTCGGGGGGGGAGGGCCGCCAGCAGCGCATCGCTTCT‑CAGGAACAGCTTGCCGCCAAACCCTCCGCCGATATACGGGGAGATAATACGCCCATTCTCCACGGGAAc > 1:271586/1‑250 (MQ=255) cAGACCAGCTTTCATGTGAGATAGCGGTGATTTTCCCGCTCTGGTCGGCACCGATACGCAAGTGCTGAAGGGTGGCGGGGCGGTGCGTGGTGTTATTGGGAATAGAGGGGC‑GGGGGAGCATCACTTTAACCGGACGTTTCACCGCTCGGGCGGCGAGGGCCGCCAGCAGCGCATCGCTTCT‑CAGGAACAGCTTGCCGCCAAACCCTCCGCCGATATACGGGGAGATAATACGCACATTCTCCACGGGaa < 1:780281/249‑1 (MQ=255) gCTTTCATGTGAGATAGCGGTGATTTTCCCGCTCTGGTCGGCACCGATACGCAAGTGCTGAAGGGTGGCGGGGCGGTGCGTGGTGTTATTGGGAATAGAGGGGC‑GGGGGAGCATCACTTTAACCGGGCGGTTTACCGCTCGGGCGGCGAGGGCCGCCAGCAGGGCATCGCTTCT‑CAGGAACAGGCTGCCGCCAAAACCCCCGCCCATATAAGGGGGGATAATACGGACATTCTCCACGGGGACTTTCAGc > 1:470058/1‑250 (MQ=255) cTTTCATGTGAGATAGCGGTGATTTTCCCGCTCTGGTCGGCACCGATACGCAAGTGCTGAAGGGGGGCGGGGCGGTGCGTGGTGTTATTGGGAATAGAGGGGC‑GGGGGAGCATCACTTTAACCGGACGTTTCACCGCTCGGGCGGCGAGGGCCGCCAGCAGCGCATCGCTTCT‑CAGGAACAGCTTGCCGCCAAACCCTCCGCCGATATACGGGGAGATAATACGCACATTCTCCACGGGAACTTTCAGCg < 1:394485/250‑1 (MQ=255) ggtgAGAGAGGGGGGATTTTGCCGGTCGGGGGGGACCCGATACGCAAGGGCGGAGGGGGGGGGGGGCGGTGGGGGGTGTTATTGGGAATGGAGGGGC‑GGGGGAGCATCACTTTAACCGGACGTTTCACCGCTCGGGCGGCGAGGGCCGCCAGCAGCGCATCGCTTCT‑CAGGAACAGCTTGCCGCCAAACCCTCCGCCGATATACGGGGAGATAATACGCACATTCTCCACGGGAACTTTCAGCGTTTTTg < 2:815793/249‑1 (MQ=255) tgAGATAGCGGTGATTTTCCGGCTCGGGTCGGCACCGATACGCAAGTGCTGAAGGGTGGGGGGGCGGTGCGTGGTGTTATTGGGAATAGGGGGGC‑GGGGGAGCATCACTTTAACCGGACGTTTCACCGCTCGGGCGGCGAGGGCCGCCAGCAGCGCATCGCTTCT‑CAGGAACAGCTTGCCGCCAAACCCTCCGCCGATATACGGGGAGATAATACGCACATTCTCCACGGGAACTTTCAGCGTTTTTGc < 1:128435/249‑1 (MQ=255) gaTAGGGGTGATTGTCCGGCTCTGGTCGGCACCGATACGCAAGTGCTGAAGGGTGGGGGGGCGGTGCGTGGTGTTATTGGGAATAGAGGGGC‑GGGGGAGCATCACTTTAACCGGACGTTTCACCGCTCGGGCGGCGAGGGCCGCCAGCAGCGCATCGCTTCT‑CAGGAACAGCTTGCCGCCAAACCCTCCGCCGATATACGGGGAGATAATACGCACATTCTCCACGGGAACTTTCAGCGTTTTTGCCAGa < 1:803075/250‑1 (MQ=255) gATTTTCCCGCTCTGGTCGGCACCGATACGCAAGTGCTGAAGGGTGGCGGGGCGGTGCGTGGTGTTATTGGGAATAGAGGGGC‑GGGGGAGCATCACTTTAACCGGACGTTTCACCGCTCGGGCGGCGAGGGCCGCCCGCAGCGCCTCGCTTCT‑CAGGAACAGCTTGCCGCCAAACCCTCCGCCGATATACGGGGGGATAAAACGCACATTCTCCACGGGAACTTTCAGCGGTTTTGCCAGATCGGGGCgg > 1:582289/1‑250 (MQ=255) aTTTTCCCGCTCTGGTCGGCACCGATACGCAAGTGCTGAAGGGTGGCGGGGCGGTGCGTGGTGTTATTGGGAATAGAGGGGC‑GGGGGAGCATCACTTTAACCGGACGTTTCACCGCTCGGGCGGCGAGGGCCGCCAGCAGCGCATCGCTTCT‑CAGGAACAGCTTGCCGCCAAACCCTCCGCCGATATACGGGGAGATAATACGCACATTCTCCACGGGAAATTTCAGCGTTTTTGCCAGATCGGGGCgg > 1:321052/1‑249 (MQ=255) tttCCCGCTCTGGTCGGCACCGATACGCAAGTGCTGAAGGGTGGCGGGGCGGTGCGTGGTGTTATTGGGAATAGAGGGGC‑GGGGGGGCATCCCTTTTAACGGGCGGTTCACCCCCCGGGGGGGGAGGGGCGCCAGCAACGGCCCGCTTCT‑CACGAACAGCTTGCCCCCAAAACCCCCGCCGCTCTACCGGGGGGGAAAACGCCCCTTTTCCCCGGGGACTTTCAGCGTTTTTGCCAGAGCggggggggac > 2:477537/1‑242 (MQ=255) ttCCCGCTCTGGTCGGCACCGATACGCAAGTGCTGAAGGGTGGCGGGGCGGTGCGTGGTGTTATTGGGAATAGAGGGGC‑GGGGGGGCGTCACTTTAACCGGACGTTTTACCGCCCGGGCGGCGGGGGGCGCCAGCAGCGCACCGGTTCC‑CAGGGACAGCCTTCCGCCCAAACCCCCGCCCGCATACGGGGGGGGAAAACGCCAATTCTTCCAGGGAACATTCCGCGCTTTTGCCAGCACGGGGGGGCAcc > 2:520431/1‑250 (MQ=255) ctcccgggccGGCCCCGATACGCAAGTGCTGAGGGGGGGGGGGGGGGTGCGGGTTGTTATTGGGAATAGGGGGGG‑GGGGGAGCATCCCTTTACCCGGCCGTTTCACCGCTCGGGCGGCGAGGGCCGCCAGCAGCGCATCGCTTCT‑CAGGAACAGCTTGCCGCCAAACCCTCCGCCGATATACGGGGAGATAATACGCACATTCTCCACGGGAACTTTCAGCGTTTTTGCCAGATCGGTGCGGCACCAGTc < 2:389364/241‑1 (MQ=255) ctctGGTCGGCACCGATACGCAAGTGCTGAAGGGTGGCGGGGCGGTGCGTGGTGTTATTGGGAATAGAGGGGC‑GGGGGGGCAACACTTTTAACCGACGGTTTCCCGCCCCGGCGGCGGAGGCCGCCCGCCGCCCCTCGCCTCC‑CAGGGAAAGCTTGCCGCCAAACCCTCCGCCGATATACGGGGGGATAATAAGCACCTTCCCCACGGGAACCTTCAGCCTTTTTGGCAGATCGGGGCGGCCCCAGTcc > 2:289319/1‑248 (MQ=255) ggTCGGCACCGATACGCAAGTGCTGAAGGGTGGCGGGGCGGGGCGTGGTGTTATTGGGAATAGAGGGGC‑GGGGGAGCAGCCCTTTCAACCGACGTTTCACCGCACCGGCGGCGCGGGCCCGCACCACCGCCACGCCTCT‑CAGGAACAGCTTGCCGCCCAACCCTCCGCCGCTATACGGGGAGATAAAACGCACATTCTCCACGGGAACCTTCACAGATTTTGCCCGAGCAGTGCGGCACCCGTAAatcat > 2:751547/1‑250 (MQ=255) ggCACCGATACGCAAGTGCTGAAGGGTGGCGGGGCGGTGCGTGGTGTTATTGGGAATAGAGGGGC‑GGGGGAGCATCACTTTAACCGGACGTTTCACCGCTCGGGCGGCGAGGGCCGCCAGCAGCGCATCGCTTCT‑CAGGAACAGCTTGCCGCCAAACCCTCCGCCGATATACGGGGAGATAATACGCACATTCTCCACGGGAACTTTCAGCGTTTTTGCCAGATCGGTGCGGCACCAGTCAATCATCTg < 1:762956/249‑1 (MQ=255) ccGATACGCAAGTGCTGAAGGGTGGCGGGGCGGCGCGTGGTGTTATTGGGAATAGAGGGGC‑GGGGGGGGGTCTCCTTAAACGGGCGTTTCCCCGCCCGGGCGGGGGGGGGCGCCAACCGCGCCTCGCCTCC‑CACGGACAGCCTGCCGCCACACCCCCCGCCGATATCCCGGGGGATAAAACGACCCATCTCCACCGGACCTCTCAGCGTTTTTGGCAGATCCGGTCGGCCCCAGCACACCATCTCATTTg > 2:265078/1‑250 (MQ=255) agggCTGAAGGGTGGGGGGGCGGTGCGTGGTGTTATTGGGAATAGAGGGGC‑GGGGGAGCATCACTTTAACCGGACGTTTCACCGCTCGGGCGGCGAGGGCCGCCAGCAGCGCATCGCTTCT‑CAGGAACAGCTTGCCGCCAAACCCTCCGCCGATATACGGGGAGATAATACGCACATTCTCCACGGGAACTTTCAGCGTTTTTGCCAGATCGGTGCGGCACCAGTCAATCATCTGATTTGAGGTCCagag < 1:226104/247‑1 (MQ=255) tGAGGGGGGGCGGGGGGGTGCGTGGTGTGTTTGGGAATAGAGGGGG‑GGGGGAGCATCACTTTAACCGGACGTTTCCCCGCTCGGGCGGCGAGGGCCGCCAGCAGCGCATCGCTTCT‑CAGGAACAGCTTGCCGCCAAACCCTCCGCCGATATACGGGGAGATAATACGCACATTCTCCACGGGAACTTTCAGCGTTTTTGCCAGATCGGTGCGGCACCAGTCAATCATCTGATTTGAGGTCCAGAGGGTaa < 1:246411/250‑1 (MQ=255) ggggcggTGCGTGGTGTTATTGGGAATAGAGGGGC‑GGGGGAGCATCACTTTAACCGGACGTTTCACCGCTCGGGCGGCGAGGGCCGCCAGCAGCGCATCGCTTCT‑CAGGAACAGCTTGCCGCCAAACCCTCCGCCGATATACGGGGAGATAATACGCACATTCTCCACGGGAACTTTCAGCGTTTTTGCCAGATCGGTGCGGCACCAGTCAATCATCTGATTTGAGGTCCAGAGGGTAAGCTTATTTCCa < 1:136612/250‑1 (MQ=255) gTGCGTGGTGTTGTTGGGAACGGGGGGGG‑GGGGGGGCATCCCTTTACCCGGCCGTTTCCCCGCCGGGGCGGCGGGGGCCGCCAGCAGCGCATCGCTTCT‑CAGGAACAGCTTGCCGCCAAACCCTCCGCCGATATACGGGGAGATAATACGCACATTCTCCACGGGAACTTTCAGCGTTTTTGCCAGATCGGTGCGGCACCAGTCAATCATCTGATTTGAGGTCCAGAGGGTAAGCTTATTTCCATCCCAg < 2:59870/250‑1 (MQ=255) gtggtgTTATTGGGAATAGAGGGGC‑GGGGGAGCATCACTTTAACCGGACGTTTCACCGCTCGGGCGGCGAGGGCCGCCAGCAGCGCATCGCTTCT‑CAGGAACAGCTTGCCGCCAAACCCTCCGCCGATATACGGGGAGATAATACGCACATTCTCCACGGGAACTTTCAGCGTTTTTGCCAGATCGGTGCGGCACCAGTCAATCATCTGATTTGAGGTCCAGAGGGTAAGCTTATTTCCATCCCAGACgg > 1:764163/1‑250 (MQ=255) ggggttttttggggAAGAGGGGGGG‑GGGGGGGCACCCCTTTACCCGGCCGTTTCCCCGCTCGGGCGGCGAGGGCCGCCAGCAGCGCATCGCTTCT‑CAGGAACAGCTTGCCGCCAAACCCTCCGCCGATATACGGGGAGATAATACGCACATTCTCCACGGGAACTTTCAGCGTTTTTGCCAGATCGGTGCGGCACCAGTCAATCATCTGATTTGAGGTCCAGAGGGTAAGCTTATTTCCATCCCAGACgg < 2:414928/239‑1 (MQ=255) tGGGAATAGAGGGGC‑GGGGGAGCATCACTTTAACCGGACGTTTCACCGCTCGGGCGGCGAGGGCCGCCAGCAGCGCATCGCTTCT‑CAGGAACAGCTTGCCGCCAAACCCTCCGCCGATATACGGGGAGATAATACGCACATTCTCCACGGGAACTTTCAGCGTTTTTGCCAGATCGGTGCGGCACCAGTCAATCATCTGATTTGAGGTCCAGAGGGTAAGCTTATTTCCATCCCAGACGGCCATCGAgg > 1:180301/1‑249 (MQ=255) gggAATAGAGGGGC‑GGGGGAGCATCACTTTAACCGGACGTTTCCCCGCTCGGGCGGCGAGGGCCGCCAGCAGCGCATCGCTTCT‑CAGGAACAGCTTGCCGCCAAACCCTCCGCCGATATACGGGGAGATAATACGCACATTCTCCACGGGAACTTTCAGCGTTTTTGCCAGATCGGCGCGGCACCAGTCAATCATCTGATTTGAGGTCCAGAGGGTAAGCTTATTTCCATCCCAGACGGCCATCGAGGc < 1:821596/249‑1 (MQ=255) aaaggagGGGC‑GGGGACGCATCACTTTACCCGGGCGTTCCCCCGCTGGGGCGGCGAGGGCCGCGAGCAGCGCATCGCTTCT‑AGGAAACAGCTTGCCGCCAAACCCTCCGCCGATATACGGGGAGATAATACGCACATTCTCCACGGGAACTTTCAGCGTTTTTGCCAGATCGGTGCGGCACCAGTCAATCATCTGATTTGAGGTCCAGAGGGTAAGCTTATTTCCATCCCAGACGGCCATCGAGGCATGc < 2:7740/246‑1 (MQ=255) aTAGAGGGGC‑GGGGGAGCATCACTTTAACCGGACGTTTCACCGCTCGGGCGGCGAGGGCCGCCAGCGGCGCATCGCTTCT‑CAGGAACAGCTTGCCGCCAAACCCTCCGCCGATATACGGGGAGATAATACGCACATTCTCCACGGGAACTTTCAGCGTTTTTGCCAGATCGGTGCGGCACCAGTCAATCATCTGATTTGAGGTCCAGAGGGTAAGCTTATTTCCATCCCAGACGGCCATCGAGGCATGCg < 1:724217/250‑1 (MQ=255) ggggggC‑GGGGGAGCATCACTTTACCCGGACGTTTCACCGCTCGGGCGGCGAGGGCCGCCAGCAGCGCATCGCTTCT‑CAGGAACAGCTTGCCGCCAAACCCTCCGCCGATATACGGGGAGATAATACGCACATTCTCCACGGGAACTTTCAGCGTTTTTGCCAGATCGGTGCGGCACCAGTCAATCATCTGATTTGAGGTCCAGAGGGTAAGCTTATTTCCATCCCAGACGGCCATCGAGGCATGCGGCt < 1:526390/248‑1 (MQ=255) ggAGCATCACTTTAACCGGACGTTTCCCCGCTCGGGCGGCGAGGGCCGCCAGCAGCGCATCGCTTCT‑CAGAAACAGCTTGCCGCCAAACCCTCCGCCGATATACGGGGAGATAATACGCACATTCTCCACGGGAACTTTCAGCGTTTTTGCCAGATCGGTGCGGCACCAGTCAATCATCTGATTTGAGGTCCAGAGGGTAAGCTTATTTCCATCCCAGACGGCCATCGAGGCATGCGGCTCCATCGCCat < 1:251882/250‑1 (MQ=255) | GCATGGCGTTCCCTTCCGGCAAATCAAGCGTGGCGAGCCGCAGGCCGGTATGACGATTCGCCCCGGCGTAGAGTAATTCGCTTTGCTGTACCGCCGTTTCCGGCGTGCCGCCGGGCAGGTTTCCAGACCAGCTTTCATGTGAGATAGCGGTGATTTTCCCGCTCTGGTCGGCACCGATACGCAAGTGCTGAAGGGTGGCGGGGCGGTGCGTGGTGTTATTGGGAATAGAGGGGC‑GGGGGAGCATCACTTTAACCGGACGTTTCACCGCTCGGGCGGCGAGGGCCGCCAGCAGCGCATCGCTTCT‑CAGGAACAGCTTGCCGCCAAACCCTCCGCCGATATACGGGGAGATAATACGCACATTCTCCACGGGAACTTTCAGCGTTTTTGCCAGATCGGTGCGGCACCAGTCAATCATCTGATTTGAGGTCCAGAGGGTAAGCTTATTTCCATCCCAGACGGCCATCGAGGCATGCGGCTCCATCGCCAT > NZ_CP009273/295598‑296084 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 26 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |