| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NZ_CP009273 | 1,820,574 | 0 | C | A | 33.3% | 93.3 / 11.6 | 48 | G203C (GGC→TGC) | astE | succinylglutamate desuccinylase |
| Reads supporting (aligned to +/- strand): ref base C (24/8); new base A (0/16); total (24/24) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 6.52e-07 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.79e-01 | |||||||||||
| Rejected as consensus: Frequency below/above cutoff threshold. | |||||||||||
GCCAGCAATGTTCCTTTCTCAAACGGCATAAAATTCAGCGTGTCACTTGCCATATGCATTTCGAAGGACGGCGAGTGGCGAGTAATTTGCGAAACCACCCGATAACGGAGCGGCGGTGTTCTCACGATACCGACACTCTCACCAGATAGCAGCGCAGCAATTGCGCTGGCAGTTACTGCAAACT‑GGCGA‑AGATCGTTTTGCCCAAAGGG‑CAA‑CGCTTTGCCAAGTT‑CCAGCGTAC‑AGGCCAGCGCGCCAAAATGTCTGGCGCTGAAATGGG‑TAAA‑CGT‑ACCACCAGGTTCC‑TGATGGAACACCAGCGCCTCCAG‑CCCCGCCGCACCCAGCCACGTCAGAAATTTCTCGTCCCAGGGAATGTCGCGTTGCGGTAATACACCGAACTGCGGATGCAAGGAGCCACGAATTGCGGTATGTAGATCAAGGTGCCAGCGCACAGATTCTTTGCCCTGGTCATAAAAATCTTCCAGGCACTGTTCCAGTTCGCGCGCCC > NZ_CP009273/1820327‑1820819 | gcCAGCAATGTTCCTTTCTCAAACGGCATAAAATTCAGCGTGTCACTTGCCATATGCATTTCGAAGGACGGCGAGTGGCGAGTAATTTGCGAAACCACCCGATAACGGAGCGGCGGTGTTCTCACGATACCGACACTCTCACCAGATAGCAGCGCAGCAATTGCGCTGGCAGTTACTGCAAACT‑GGCGA‑AGATCGTTTTGCCCAAAGGG‑CAA‑CGCTTTGCCAAGTT‑CCAGCGTAC‑AGGCCAGCGCGCCaa < 1:795723/250‑1 (MQ=255) ttCCTTTCTCAAACGGCATAAAATTCAGCGTGTCACTTGCCATATGCATTTCGAAGGACGGCGAGTGGCGAGTAATTTGCGAAACCACCCGATAACGGAGCGGCGGTGTTCTCACGATACCGACACTCTCACCAGATAGCAGCGCAGCAATTGCGCTGGCAGTTACTGCAAACT‑GGCGA‑AGATCGTTTTGCCCAAAGGG‑CAA‑CGCTTTGCCAAGTT‑CCAGCGTAC‑AGGCCAGCGCGCCAAAATGTCTgg < 1:570105/249‑1 (MQ=255) cGGCATAAAATTCAGCGTGTCACTTGCCATATGCATTTCGAAGGACGGCGAGTGGCGAGTAATTTGCGAAACCACCCGATAACGGAGCGGCGGTGTTTTCACGATACCGACACTCTCACCAAATAGCAGCGCAGCAATTTCGCTTGCAGGTAATTCAAACT‑GGCGA‑AAAACGGTTTGCCCCAAGGG‑CCA‑CGCGTTGCCCAGTT‑CCCGCGTAC‑AGGGCCGCGCGCCCAAAAATCTGGCGCTGCAAAGGG‑t > 2:70921/1‑249 (MQ=255) gCATAAAATTCAGCGTGTCACTTGCCATATGCATTTCGAAGGACGGCGAGTGGCGAGTAATTTGCGAAACCACCCGATAACGGAGCGGCGGTGTTCTCACGATACCGACACTCTCACCAGATAGCAGCGCAGCAATTGCGCTGGCAGTTACTGCAAACT‑GGCGA‑AGATCGTTTTGCCCAAAAGG‑CAA‑CGCTTTGCCCAGTT‑CCCGCGTAC‑AGGCCAGCGCGCCCAAATGTCTGGCGCTGAAAAGGG‑Gaa > 1:457803/1‑249 (MQ=255) aaaTTCAGCGTGTCACTTGCCATATGCATTTCGAAGGACGGCGAGTGGCGAGTAATTTGCGAAACCACCCGATAACGGAGCGGCGGTGGTTTCACGATACCGACACCCTCCCCCGATAACAACGCAGCAATTTCGCTGGCAGTTACCTCAAAAT‑GGCGC‑AGATCGTTTTTCCCAAAAGG‑CAA‑CGCCTTTCCAAATT‑CCCACGTCC‑CGGGCCGCGCGCCCAAATTGCCTGCGCTGAGATGGG‑TAAA‑CGG‑ac > 2:469336/1‑250 (MQ=255) gCGTGTCACTTGCCATATGCATTTCGAAGGACGGCGAGTGGCGAGTAATTTGCGAAACCACCCGATAACGGAGCGGCGGTGTTCTCACGATACCGACACTCTCACCAGATAGCAGCGCAGCAATTGCGCTGGCAGTTACTGCAAACT‑GGCGA‑AGATCGTTTTGCCCAAAGGG‑CAA‑CGCTTTGCCAAGTT‑CCAGCGTAC‑AGGCCAGCGCGCCAAAATGTCTGGCGCTGAAATGGG‑TAAA‑CGT‑ACCACCAgg < 1:217161/250‑1 (MQ=255) gCGTGTCACTTGCCATATGCATTTCGAAGGACGGCGAGTGGCGAGTAATTTGCGAAACCACCCGATAACGGAGCGGCGGTGTTCTCACGATACCGACACTCTCACCAGATAGCAGCGCAGCAATTGCGCTGGCAGTTACTGCAAACT‑GGCGA‑AGATCGTTTTGCCCAAAGGG‑CAA‑CGCTTTGCCAAGTT‑CCAGCGTAC‑AGGCCAGCGCGCCAAAATGTCTGGCGCTGAAATGGG‑TAAA‑CGT‑ACCACCAgg < 1:36202/250‑1 (MQ=255) tGCATTTCGAAGGACGGCGAGTGGCGAGTAATTTGCGAAACCACCCGATAACGGAGCGGCGGTGTTCTCACGGTACCGACACCCTCACCAGATAGCAGCGGCGCAATTGCGCTGGCAGTTTACGCCAACA‑TGCGT‑AAATCGGTTTTCCCCAAGGG‑GAA‑ACCTTTGCCAAGTT‑CCAGCGGAC‑AGGCCAGCGCGCCCAAATGGGTGGCGCCGTAATAGG‑GAAA‑CGT‑ACCACCCCGGTCC‑TGATGGGACATCa > 2:159947/1‑250 (MQ=255) cGAAGGACGGCGAGTGGCGAGTAAGTTGCGAAACCACCCGATAACGGAGCGGCGGTGTTCTCACGATACCGACACTCTCACCAGATAGCAGCGCAGCAATTGCGCTGGCAGTTACTGCAAACT‑GGCGA‑AGATCGTTTTGCCCAAAGGG‑CAA‑CGCTTTGCCAAGTT‑CCAGCGTAC‑AGGCCAGCGCGCCAAAATGTCTGGCGCTGAAATGGG‑TAAA‑CGT‑ACCACCAGGTTCC‑TGATGGAACACCAGCGCCt < 2:289367/249‑1 (MQ=255) ggcgagtggcgagtAATTTGCGAAACCACCCGATAACGGAGCGGCGGTGTTCTCACGATACCGACACTCTCACCAGATAGCAGCGCAGCAATTGCGCTGGCAGTTACTGCAAACT‑GGCGA‑AGATCGTTTTGCCCAAAGGG‑CAA‑CGCTTTGCCAAGTT‑CCAGCGTAC‑AGGCCAGCGCGCCAAAATGTCTGGCGCTGAAATGGG‑TAAA‑CGT‑ACCACCAGGTTCC‑TGATGGAACACCAGCGCCTCCAG‑CCccg < 2:537425/250‑1 (MQ=255) gATAACGGAGCGGCGGTGTTCTCACGATACCGACACTCTCACCAGATAGCAGCGCAGCAATTGCGCTGGCAGTTACTTCAAACT‑GGCGA‑AGAACGGTTTGCCCAAAGGG‑CAA‑CGCTTTGTCCAGTT‑TCCGCGGAC‑AGGGCCGCGCGCCAAAATGTCTCGCGCCGAAATGGG‑TGAA‑CCTAACAACCGGGTTCT‑GAATGGAA‑ACCCCCGCCCCCCG‑GCCCGCCGCCCCCACCCACGTCCGAAAATTCTCgcc > 2:325793/1‑248 (MQ=255) tAACGGAGCGGCGGTGTTCTCACGATACCGCCACTCCCACCAGAAAGGAGCGCAGCAAATGCGCTGGCCGTTACTGCAAAAA‑GGCGA‑AGATACTTTTTTCCAAAAGG‑CAA‑CGCTTTTCCAAGTT‑CCACCGTAC‑AGGCCAGCGCGCCAAAATATCCGGCGCTGCAAATGG‑TAAA‑AGG‑CACACCACGGTCC‑CAATGTGACACCAGCGCCTCTCA‑CCCCCCCGCCCCCAACCACGCCACAAATTtctcacccc > 2:385305/1‑245 (MQ=255) gggggcggcgGTTTCCCCACGATCCCGACACCCCCACCAGAAAGCAGCGCAGCAATTGCGGTGGCAGTTACTACAAACG‑GGCGA‑AGATCTTTTTGCCAAAGGGA‑CAA‑CTCTTTGCAAAGTC‑CAAGCGAAC‑GGCCCAGCGCGCAAAAATGTCGGGCGCAGAAAGGGG‑AAAC‑CGC‑CCCACCGGTTTCC‑GGAGGAAACCCCGGCCCCCCCAG‑CCCCGCCGCACCCAGCCACGTCAGAAATTTCTCGTCCCAgg < 2:259273/246‑1 (MQ=255) gcggTGTTCTCACGATACCGACACTCTCACCAGATAGCAGCGCAGCAATTGCGCTGGCAGTTACTGCAAACT‑GGCGA‑AGATCGTTTTGCCCAAAGGG‑CAA‑CGCTTTGCCAAGTT‑CCAGCGTAC‑AGGCCAGCGCGCCAAAATGTCTGGCGCTGAAATGGG‑TAAA‑CGT‑ACCACCAGGTTCC‑TGATGGAACACCAGCGCCTCCAG‑CCCCGCCGCCCCCAGCCACGTCCGAAATTTCTCGTCCCAGGGAATgcc > 2:66922/1‑248 (MQ=255) ctcACGATACCGACACTCTCACCAGATAGCAGCGCAGCAATTGCGCTGGCAGTTACTGCAAACT‑GGCGA‑AGATCGTTTTGCCCAAAGGG‑CAA‑CGCTTTGCCAAGTT‑CCAGCGTAC‑AGGCCAGCGCGCCAAAATGTCTGGCGCTGAAATGGG‑TAAA‑CGT‑ACCACCAGGTTCC‑TGATGGAACACCAGCGCCTCCAG‑CCCCGCCGCACCCAGCCACGTCAGAACTTTCTCGTCCCAGGGAATGTCGCGCTGCg > 2:174061/1‑250 (MQ=255) cccGACACCGCCCCCCTCCCAAGATAGCAGCGAAGAAATGGCG‑TGGACGTTTCCGCAAACC‑GGGGA‑AAGTCTTTTTTGCCAAAGGG‑GAACCGCTTTCCAAATTC‑CCAGCGTAC‑AGGCCGGCGCGCAAAAATGTCGGGCGCAAAAATGGA‑AAAA‑CGC‑CCCCCCAGTTCCC‑TGAGGAACCCCCACCCCCCCCAG‑CCCCGCCGCACCCAGCCACGTCAGAAATTTCTCGTCCCAGGGAATGTCGCGTTGCGGt < 2:457887/248‑1 (MQ=255) aCCGACACTCTCACCAGATAGCAGCGCAGCAATTGCGCTGGCAGTTACTGCAAACT‑GGCGA‑AGATCGTTTTGCCCAAAGGG‑CAA‑CGCTTTGCCAAGTT‑CCAGCGTAC‑AGGCCAGCGCGCCAAAATGTCTGGCGCTGAAATGGG‑TAAA‑CGT‑ACCACCAGGTTCC‑TGATGGAACACCAGCGCCTCCAG‑CCCCGCCGCACCCAGCCACGTCAGAAATTTCTCGTCCCAGGGAATGTCGCGTTGCGGTAATaca > 1:177864/1‑250 (MQ=255) aCCGACACTCTCACCAGATAGCAGCGCAGCAATTGCGCTGGCAGTTACTGCAAACT‑GGCGA‑AGATCGTTTTGCCCAAAGGG‑CAA‑CGCTTTGCCAAGTT‑CCAGCGTAC‑AGGCCAGCGCGCCAAAATGTCTGGCGCTGAAATGGG‑TAAA‑CGT‑ACCACCAGGTTCC‑TGATGGAACACCAGCGCCTCCAG‑CCCCGCCGCACCCAGCCACGTCAGAAATTTCTCGTCCCAGGGAATGTCGCGCTGCGGTAATaca > 2:53627/1‑250 (MQ=255) ccGACACTCTCACCAGATAGCAGCGCAGCAATTGCGCTGGCAGTTACTGCAAACG‑GGCAA‑AGATCGTTTTGCCAAAAGGG‑CAA‑CGCTTTGCCAAGTT‑CCAGCGTAC‑AGGCCAGCGCGCAAAAATGTCTGGCGCTGAAATGGT‑TAAA‑CGT‑ACCCCCAGTTTCC‑TGATGAAACCCCAGCGCCTCCAG‑CCCCGCCGCACCCAGCCACGTCAGAAATTTCTCGTCCCAGGGAATGTCGCGTTGCGGTAATaca < 1:693058/249‑1 (MQ=255) cccAGAGAGCAGCGCAGCAATTGCGCTGGCAGTTACTGCAAACG‑GGCGA‑AGATCGTTTTGCCAAAAGGG‑CAA‑CGCTTTGCCAAGTC‑CCAGCGTAC‑AGGCCAGCGCGCAAAAATGTCGGGCGCTAAAATGGG‑TAAA‑CGT‑CCCCCCAGGTTCC‑TGATGGAACACCAGCGCCTCCAG‑CCCCGCCGCACCCAGCCACGTCAGAAATTTCTCGTCCCAGGGAATGTCGCGTTGCGGTAATACACCGAACTGc < 1:291700/246‑1 (MQ=255) aaTTGCGCTGGCAGTTACTGCAAACT‑GGCGC‑AGATCGTTTTGCCCAAAGGG‑CAA‑CGCTTTGCCAAGTT‑CCAGCGTAC‑AGGCCAGCGCGCCAAACTGTCTGGCGCTGAAATGGG‑TAAA‑CGT‑ACCACCAGGTTCC‑TGATGGAACACCAGCGCCTCCAG‑CCCCGCCGCACCCAGCCACGTCAGAAATTTCTCGTCCCAGGGAATGTCGCGTTGCGGTAATACACCGAACCGCGGATGCAAGGAGCCACGCAtt > 2:65188/1‑250 (MQ=255) aaTTGCGCTGGCAGTTACTGCAAACT‑GGCGA‑AGATCGTTTTGCCCAAAGGG‑CAA‑CGCTTTGCCAAGTT‑CCAGCGTAC‑AGGCCAGCGCGCCAAAATGTCTGGCGCTGAAATGGG‑TAAA‑CGT‑ACCACCAGGTTCC‑TGATGGAACACCAGCGCCTCCAG‑CCCCGCCGCACCCAGCCACGTCAGAAATTTCTCGTCCCAGGGAATGTCGCGTTGCGGTAATCAACCGAACTGCGGATGCAAGGAGCCACGAAtt > 2:254048/1‑250 (MQ=255) aTTGCGCTGGCAGTTACTGCAAACT‑GGCGA‑AGATCGTTTTGCCCAAAGGG‑CAA‑CGCTTTGCCAAGTT‑CCAGCGTAC‑AGGCCAGCGCGCCAAAATGTCTGGCGCTGAAATGGG‑TAAA‑CGT‑ACCACCAGGCTCC‑TGATGGCACACCAGCGCCTCCAG‑CCCCCCCGCACCCAGCCACGTCAGAAATTTCTCGTCCCAGGGACTGTCGCGCTTCGGTAATACACCGAACTGCGGACGACAGGAGCCACGAATTg > 2:502524/1‑250 (MQ=255) ttGCGCTGGCAGTTACTGCAAACT‑GGCGA‑AGATCGTTTTGCCCAAAGGG‑CAA‑CGCTTTGCCAAGTT‑CCAGCGTAC‑AGGCCAGCGCGCCAAAATGTCTGGCGCTGAAATGGG‑TAAA‑CGT‑ACCACCAGGTTCC‑TGATGGAACACCAGCGCCTCCAG‑CCCCGCCGCACCCAGCTCCGTCAGCAATTTCTCGTCCCAGGGAATGTCGCGTTGCGGTAATACACCGAACTGCGCACGCAAGGAGCCACGAATTGc > 2:176628/1‑250 (MQ=255) gCAGTTCCTGAAAACT‑GGCGA‑AGATCGTTTGGCCAAAAGGG‑CAC‑CGCTTTGCCAAGTC‑CCAGCGTAC‑AGGCCAGCGCGCAAAAATGTCTGGCGCTGAAAGGGG‑TAAC‑CGT‑CCCCCCAGTTCCC‑TGAGGGAACACAAGCGCCCCCAG‑CCCCGCCGCACCCAGCCACGTCAGAAATTTCTCGTCCCAGGGAATGTCGCGTTGCGGTAATACACCGAACTGCGGATGCAAGGAGCCACGAATTGCGGTATGTa < 1:664734/250‑1 (MQ=255) gCAGTTACGGCAAGCT‑GGCAA‑AGTGCGTTTTGCCCAAGGGC‑CAA‑CGCTTTGCCAAGTC‑CCAGCGAAC‑AGCCCCGCGCAAAAAAATGTCCGGCGCGAAAATGGA‑AAAA‑CGC‑ACCCCCGGGTTCC‑TGATGAACCACCCGCGCCCCCAG‑CCCCGCCGCACCCAGCCACGTCAGAAATTTCTCGTCCCAGGGAATGTCGCGTTGCGGTAATACACCGAACTGCGGATGCAAGGAGCCACGAATTGCGGTATGTa < 2:69925/250‑1 (MQ=255) gttgctgaaaCTGGGCAA‑AGAT‑GTTTTGGCCAAAGGG‑ACA‑CCCTTTTCCAAAGT‑CCCGGCTACAAGGCCCGC‑CCCAAAAATGTCCGGGCGTGAAATGGG‑TAAA‑CCG‑CCCCCCAGGGTCCTTGAGGAAACCCCCCCCCCCCCGG‑CCCCGCCGCACCCAGCCACGTCAGAAATTTCTCGTCCCAGGGAATGTCGCGTTGCGGTAATACACCGAACTGCGGATGCAAGGAGCCACGAATTGCGGTATGTAGa < 2:626438/242‑1 (MQ=255) aCTGAAAACT‑GGCGA‑AGATCGTTTTGCCCAAAGGC‑CAC‑CGCTTTGCCAAGTT‑CCAGCGTAC‑AGGCCAGCGCGCAAAAATGTCGGGCGCTAAAATGGG‑TAAA‑CGT‑CCCCCCAGGTTCC‑TGATGAAACACCAGCGCCTCCAG‑CCCCGCCGCACCCAGCCACGTCAGAAATTTCTCGTCCCAGGGAATGTCGCGTTGCGGTAATACACCGAACTGCGGATGCAAGGAGCCACGAATTGCGGTATGTAGATCa < 1:401333/249‑1 (MQ=255) cTGCAAACT‑GGCGA‑AGATCGTTTTGCCCAAAGGG‑CAA‑CGCTTTGCCAAGTT‑CCAGCGTAC‑AGGCCAGCGCGCCAAAATGTCTGGCGCTGAAATGGG‑TAAA‑CGT‑ACCACCAGGTTCC‑TGATGGAACACCAGCGCCTCCAG‑CCCCGCCGCACCCAGCCACGTCGGAAATTTCTCGTCCCAGGGAATGTCGCGTTGCGGTAATACACCGAACTGCGGATGCAAGGAGCCACGAATTGCGGTATGTAGATCAAg > 2:198578/1‑250 (MQ=255) tGCAAACT‑GGCGA‑AGATCGTTTTGCCCAAAGGG‑CAA‑CGCTTTGCCAAGTT‑CCAGCGTAC‑AGGCCAGCGCGCCAAAATGTCTGGCGCTGAAATGGG‑TAAA‑CGT‑ACCACCAGGTTCC‑TGATGGAACACCAGCGCCTCCAG‑CCCCGCCGCACCCAGCCACGTCAGAAATTTCTCGTCCCAGGGAATGTCGCGTTGCGGTAATACACCGAACTGCGGATGCAAGGAGCCACGAATTGCGGTATGTAGATCAAgg > 1:621832/1‑250 (MQ=255) cgCAAACC‑GGGGACAGTTCGTTTGACCAAAAGGG‑CAA‑CGTTTTGCCAGGTC‑CCAGCGAAG‑AGGCCGGCGCCAAAAAATGTGTGGCGCTAAAAGGGT‑TAAC‑CGC‑CCCACCGGTGCCC‑TGAGGGAACCCCAGCCCCCCCAG‑CCCCGCCGCACCCAGCCACGTCAGAAATTTCTCGTCCCAGGGAATGTCGCGTTGCGGTAATACACCGAACTGCGGATGCAAGGAGCCACGAATTGCGGTATGTAGATCaa < 2:457803/248‑1 (MQ=255) aaaCC‑GGGGA‑AGGACGGTTTGCCCCAAGGG‑CAA‑CCCTTTGGCAAGTTGCCAGC‑TAC‑AGGCCCGCGCGGCAAAATGGCTGGGCCCGAAAAGGG‑TAAACCGA‑CCCCCCAGGTTCT‑TGAT‑GAACAACCGCCCCCCCCGCCCCCGCCGCACCCAGCCACGTCAGAAATTTCTCGTCCCAGGGAATGTCGCGTTGCGGTAATACACCGAACTGCGGATGCAAGGAGCCACGAATTGCGGTATGTAGATCAAGGTg < 2:392176/250‑1 (MQ=255) cT‑GGCGA‑AGATCGTTTTGCCCAAAGGG‑CAA‑CGCTTTGCAAAGTT‑CCAGCGTAC‑AGGCCAGCGCGCAAAAATGTCGGGCGCTGAAAGGGG‑TAAA‑CGT‑ACCACCAGGTCCC‑GGATGAAACACCAGCGCCCCCAG‑CCCCGCCGCACCCAGCCACGTCAGAAATTTCTCGTCCCAGGGAATGTCGCGTTGCGGTAATACACCGAACTGCGGATGCAAGGAGCCACGAATTGCGGTATGTAGATCAAGGTGCCAg < 1:791710/250‑1 (MQ=255) aTCGTTTGCCCAAAAGGC‑CAA‑CTCTTTGCAAAGTT‑CCAGCGTAC‑AGGCCAGCGCGCAAAAATGTCGGGCGCTGAAAGGGG‑AAAA‑CGT‑ACCACCGGGTTCC‑TGATGAAACACCAGCGCCCCCAC‑CCCCGCCGCACCCAGCCACGTCAGAAATTTCTCGTCCCAGGGAATGTCGCGTTGCGGTAATACACCGAACTGCGGATGCAAGGAGCCACGAATTGCGGTATGTAGATCAAGGTGCCAGCGCACAGAt < 1:234528/250‑1 (MQ=255) gCCCAAAGGG‑CAA‑CGCTTTGCCAAGTT‑CCAGCGTAC‑AGGCCAGCGCGCCAAAATGTCTGGCGCTGAAATGGG‑TAAA‑CGT‑ACCACCAGGCTCC‑TGATGGAACACCAGCGCCTCCAG‑CCCCGCCGCACCCAGCCACGTCAGAAATTTCTCGTCCCAGGGCATGTCGCGTTGCGGTAATACACCGAACTGCGGATGCAAGGAGCCACGAATTGCGGTATGTAGATCAAGGTGCCAGCGCACAGATTCTTTGcc > 2:693404/1‑250 (MQ=255) cccAAAGGG‑CAA‑CGCTTTGCCAAGTT‑CCAGCGTAC‑AGGCCAGCGCGCCAAAATGTCTGGCGCTGAAATGGG‑TAAA‑CGT‑ACCACCAGGTTCC‑TGATGGAACACCAGCGCCTCCAG‑CCCCGCCGCACCCAGCCACGTCAGAAATTTCTCGTCCCAGGGAATGTCGCGTTGCGGTAATACACCGAACTGCGGATGCAAGGAGCCACGAATTGCGGTATGTAGATCAAGGTGCCAGCGCACAGGTTCTTTGccc > 2:13435/1‑250 (MQ=255) aaaaGGGCCAG‑CGCTTTGCAAAGTG‑CGCGCGCAG‑AGGCCGGCGCGACAAAATGTC‑GGGGCGAGAATGGGATAAA‑CGT‑CCCACCAGGTTCC‑TGAGGGAACCCCCGCCCCTCCAC‑CCCCGCCGCACCCAGCCACGTCAGAAATTTCTCGTCCCAGGGAATGTCGCGTTGCGGTAATACACCGAACTGCGGATGCAAGGAGCCACGAATTGCGGTATGTAGATCAAGGTGCCAGCGCACAGATTCTTTGCCCt < 2:378670/249‑1 (MQ=255) ccaccGCTTGGCAAACTG‑CCAGCGTCC‑AGGCCAGCGCGCAAAATTGCGTGGCG‑TGAAAAGGG‑GAAACCCC‑CCCCCCAGTTTCC‑GGATGGACCACCGGCGCCCCCGG‑CCCCGCCGCACCCAGCCACGTCAGAAATTTCTCGTCCCAGGGAATGTCGCGTTGCGGTAATACACCGAACTGCGGATGCAAGGAGCCACGAATTGCGGTATGTAGATCAAGGTGCCAGCGCACAGATTCTTTGCCCTGGTCATa < 2:341671/246‑1 (MQ=255) gCTTTGCCAAGTT‑CCAGCGTAC‑AGGCCAGCGCGCCAAAATGTCTGGCGCTGAAATGGG‑TAAA‑CGT‑ACCACCAGGTTCC‑TGATGGAACACCAGCGCCTCCAG‑CCCCGCCGCACCCAGCCACGTCAGAAATTTCTCGTCCCAGGGAATGTCGCGTTGCGGTAATACACCGAACTGCGGATGCAAGGAGCCACGAATTGCGGTATGTAGCTCAAGGTGCCAGCGCACAGATTCTTTGCCTCGGTCATAAAAAt > 2:413442/1‑250 (MQ=255) gCTTTGCCAAGTC‑CAAGCGTAC‑AGGCCGGCGCGCAAAAATGTCGGGCGCTGAAATGGA‑TAAA‑CGT‑ACCACCAGGTTCC‑TGAGGGAACACCAGCGCCTCCAG‑CCCCGCCGCACCCAGCCACGTCAGAAATTTCTCGTCCCAGGGAATGTCGCGTTGCGGTAATACACCGAACTGCGGATGCAAGGAGCCACGAATTGCGGTATGTAGATCAAGGTGCCAGCGCACAGATTCTTTGCCCTGGTCATAAAAAt < 1:670049/250‑1 (MQ=255) ttGCCAAGTT‑CCAGCGTAC‑AGGCCAGCGCGCCAAAATGTCTGGCGCTGAAATGGG‑TAAA‑CGT‑ACCACCAGGTTCC‑TGATGGAACACCAGCGCCTCCAG‑CCCCGCCGCACCCAGCCACGTCAGAAATTTCTCGTCCCAGGGAATGTCGCGTTGCGGTAATACACCGAACTGCGGATGCAAGGAGCCACGAATTGCGGTATGAAGATCAAGGAGCCAGCGCACAGATTCTTTGCCCTGGTCATAAAAATCtt > 2:548938/1‑250 (MQ=255) tGCCAAGTT‑CCAGCGTAC‑AGGCCAGCGCGCCAAAATGTCTGGCGCTGAAATGGG‑TAAA‑CGT‑ACCACCAGGTTCC‑TGATGGAACACCAGCGCCTCCAG‑CCCCGCCGCACCCAGCCACGTCAGAAATTTCTCGTCCCAGGGAATGTCGCGTTGCGGTAATACACCGAACTGCGGATGCAAGGAGCCACGAATTGCGGTATGTAGATCAAGGTGCCAGCGCACAGATTCTTTGCCCTGGTCATAAAAATCTTc > 1:710446/1‑250 (MQ=255) ccAGCGTAC‑AGGCCAGCGCGCCAAAATGTCTGGCGCTGAAATGGG‑TAAA‑CGT‑ACCACCAGGTTCC‑TGATGGAACACCAGCGCCTCCAG‑CCCCGCCGCACCCAGCCACGTCAGAAATTTCTCGTCCCAGGGAATGTCGCGTTGCGGTAATACACCGAACTGCGGATGCAAGGAGCCACGAATTGCGGTATGTAGATCAAGGTGCCAGCGCACAGATTCTTTGCCCTGGTCATACACATCTTCCAGGCACTg > 2:67538/1‑250 (MQ=255) ccACCGTAC‑GGCCCACCGCGCAAAAATGTGTGGCGCTGAAATGGG‑AAAA‑CTC‑CCCACCAGGTCCC‑TGAAGGAACACCAGCCCCCCCGG‑CCCCGCCGCACCCAGCCACGTCAGAAATTTCTCGTCCCAGGGAATGTCGCGTTGCGGTAATACACCGAACTGCGGATGCAAGGAGCCACGAATTGCGGTATGTAGATCAAGGTGCCAGCGCACAGATTCTTTGCCCTGGTCATAAAAATCTTCCAGGCACt < 1:670893/249‑1 (MQ=255) gcccAGCGCGCAAAATGGTCGGGCGCTGAAAGGGG‑AAAA‑CGT‑CCCACCAGTTCCC‑TGAGGAAACCCCAGCGCCCCCAG‑CCCCGCCGCACCCAGCCACGTCAGAAATTTCTCGTCCCAGGGAATGTCGCGTTGCGGTAATACACCGAACTGCGGATGCAAGGAGCCACGAATTGCGGTATGTAGATCAAGGTGCCAGCGCACAGATTCTTTGCCCTGGTCATAAAAATCTTCCAGGCACTGTTCCAGTTcg < 1:466303/248‑1 (MQ=255) gCCAGCGCGCCAAAATGTCTGGCGCTGAAATGGG‑TAAA‑CGT‑ACCACCAGGTTCC‑TGATGGAACACCAGCGCCTCCAG‑CCCCGCCGCACCCAGCCACGTCAGAAATTTCTCGTCCCAGGGAATGTCGCGTTGCGGTAATACACCGAACTGCGGATGCAAGGAGCCACGAATTGCGGTATGTAGATCAAGGTGCCAGCGCACAGATTCTTTGCCCTGGTCATAAAAATCTTCCAGGCACTGTTCCAGTTcgc > 2:841695/1‑250 (MQ=255) ccgggcgcacAAAAGGGCTGGCGCGAAAAGGGG‑TAAA‑CTG‑CCCACCAGGTTCC‑TGATGGAACCCCCGCGCCTCCAG‑CCCCGCCGCACCCAGCCACGTCAGAAATTTCTCGTCCCAGGGAATGTCGCGTTGCGGTAATACACCGAACTGCGGATGCAAGGAGCCACGAATTGCGGTATGTAGATCAAGGTGCCAGCGCACAGATTCTTTGCCCTGGTCATAAAAATCTTCCAGGCACTGTTCCAGTTcgcg < 1:431970/241‑1 (MQ=255) cgcgcCAAAATGTCTGGCGCTGAAATGGG‑TAAA‑CGT‑ACCACCAGGTTCC‑TGATGGAACACCAGCGCCTCCAG‑CCCCGCCGCACCCAGCCACGTCAGAAATTTCTCGTCCCAGGGAATGTCGCGTTGCGGTAATACACCGAACTGCGGATGCAAGGAGCCACGAATTGCGGTATGTAGATCAAGGTGCCAGCGCACAGATTCTTTGCCCTGGTCATAAAAATCTTCCAGGCACTGTTCCAGTTCGCGCGcc > 2:427312/1‑250 (MQ=255) gcgcAAAAAGGTCTGGGCATGAAAGGGG‑AAAC‑CGC‑ACCCCCGGGTCCG‑GGATGAAACCCCAGCCCCTCCAG‑CCCCGCCGCACCCAGCCACGTCAGAAATTTCTCGTCCCAGGGAATGTCGCGTTGCGGTAATACACCGAACTGCGGATGCAAGGAGCCACGAATTGCGGTATGTAGATCAAGGTGCCAGCGCACAGATTCTTTGCCCTGGTCATAAAAATCTTCCAGGCACTGTTCCAGTTCGCGCGccc < 1:490603/250‑1 (MQ=255) | GCCAGCAATGTTCCTTTCTCAAACGGCATAAAATTCAGCGTGTCACTTGCCATATGCATTTCGAAGGACGGCGAGTGGCGAGTAATTTGCGAAACCACCCGATAACGGAGCGGCGGTGTTCTCACGATACCGACACTCTCACCAGATAGCAGCGCAGCAATTGCGCTGGCAGTTACTGCAAACT‑GGCGA‑AGATCGTTTTGCCCAAAGGG‑CAA‑CGCTTTGCCAAGTT‑CCAGCGTAC‑AGGCCAGCGCGCCAAAATGTCTGGCGCTGAAATGGG‑TAAA‑CGT‑ACCACCAGGTTCC‑TGATGGAACACCAGCGCCTCCAG‑CCCCGCCGCACCCAGCCACGTCAGAAATTTCTCGTCCCAGGGAATGTCGCGTTGCGGTAATACACCGAACTGCGGATGCAAGGAGCCACGAATTGCGGTATGTAGATCAAGGTGCCAGCGCACAGATTCTTTGCCCTGGTCATAAAAATCTTCCAGGCACTGTTCCAGTTCGCGCGCCC > NZ_CP009273/1820327‑1820819 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 26 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |