| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NZ_CP009273 | 687,389 | C→A | E137* (GAA→TAA) | ybeY ← | rRNA maturation RNase YbeY |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NZ_CP009273 | 687,389 | 0 | C | A | 94.7% | 261.6 / ‑2.9 | 75 | E137* (GAA→TAA) | ybeY | rRNA maturation RNase YbeY |
| Reads supporting (aligned to +/- strand): ref base C (0/0); major base A (31/40); minor base T (4/0); total (35/40) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 4.31e-02 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
TTTTCGGTTCACCGTGGAAAAGTTGGCTGAGTAACAGGGAGAAAAATCCCTTCTTGTTGCTTATCGTGTCACTACTGTGTGAATTGTCGTCGCTCATGGCGTCGTATGGGTTCTCATGTTAGTTAATCAAAACGCCGTCGTTAATCACCAACGGCGGGGACGTCTGCCAGTCAAATGCCTGGCAAATTATTCTTTCTCGGCAATGT‑ACGGATCCTCATAGCCCAGAGCAAGCATAATCTCTGTTTCGAGGGCTTCCATTTCTTCTGCTTCGTCATCTTCGATGTGATCGTAACCTAACAAATGCAGACTGCCGTGCACCACCATATGCGCCCAGTGCGCCTCCAGTGGTTTGCCTTGCTCCTGAGCTTCCTTCTCAACCACCTGACGGCAGATAACCAGATCGCCCAGTAGCGACATTTCCATGCCAGGCGGCACTTCAAACGGGAAGGAGAGCACGTTGGTCGGCTTATCCTTACCGCGATAGGT > NZ_CP009273/687144‑687629 | ttttCGGTTCACCGTGGAAAAGGTGGCTGAGTAACAGGGAGAAACATCCCGTCTTGTTGCTTATCGTGGCACTACTGTGTGAATTGTCGTCGCTCAGGGCGTCGTATGGGTTCTCATGTTAGTTAATCAAAGCGCCGTCGTTAATCACCAACGGCGGGGACGTCTGCCAGTCAAATACCTGGCAAATTATTCTTTCTCGGCAATGT‑ACGGATCCTCATAGCCCAGAGCAAGCATAATCTCTGTTTAGAgg < 2:176117/250‑1 (MQ=255) ttCGGTTCACCGTGGAAAAGTTGGCTGAGTAACAGGGAGAAAAATCCCTTCTTGTTGCTTATCGTGTCACTACTGTGTGAATTGTCGTCGCTCATGGCGTCGTATGGGTTCTCATGTTAGTTAATCAAAACGCCGTCGTTAATCACCAACGGCGGGGACGTCTGCCAGTCAAATGCCTGGCAAATTATTCTTTCTCGGCAATGT‑ACGGATCCTCATAGCCCAGAGCAAGCATAATCTCTGTTTAGAggg < 2:670483/249‑1 (MQ=255) ttCGGTTCACCGTGGAAAAGTTGGCTGAGTAACAGGGAGAAAAATCCCTTCTTGTTGCTTATCGTGTCACTACTGTGTGAATTGTCGTCGCTCATGGCGTCGTATGGGTTCTCATGTTAGTTAATCAAAACGCCGTCGTTAATCACCAACGGCGGGGACGTCTGCCAGTCAAATGCCTGGCAAATTATTCTTTCTCGGCAATGT‑ACGGATCCTCATAGCCCAGAGCAAGCATAATCTCTGTTTAGAggg < 1:371234/249‑1 (MQ=255) tCGGTTCACCGTGGAAAAGTTGGCTGAGTAACAGGGAGAAAAATCCCTTCTTGTTGCTTATCGTGTCACTACTGTGTGAATTGTCGTCGCTCATGGCGTCGTATGGGTTCTCATGTTAGTTAATCAAAACGCCGTCGTTAATCACCAACGGCGGGGACGTCTGCCAGTCAAATGCCTGGCAAATTATTCTTTCTCGGCAATGT‑ACGGATCCTCATAGCCCAGAGCAAGCATAATCTCTGTTTAGAGGGc < 1:466617/249‑1 (MQ=255) ggTTCACCGTGGAAAAGTTGGCTGAGTAACAGGGAGAAAAATCCCTTCTTGTTGCTTATCGTGTCACTACTGTGTGAATTGTCGTCGCTCATGGCGTCGTATGGGTTCTCATGTTAGTTAATCAAAACGCCGTCGTTAATCACCAACGGCGGGGACGTCTGCCAGTCAAATGCCTGGCAAATTATTCTTTCTCGGCAATGT‑ACGGATCCTCATAGCCCAGAGCAAGCATAATCTCTGTTTAGAGGGCtt < 1:86446/249‑1 (MQ=255) aCCGTGGAAAAGTTGGCTGAGTAACAGGGAGAAAAATCCCTTCTTGTTGCTTATCGTGTCACTACTGTGTGAATTGTCGTCGCTCATGGCGTCGTATGGGTTCTCATGTTAGTTAATCAAAACGCCGTCGTTAATCACCAACGGCGGGGACGTCTGCCAGTCAAAAGCCTGGCAAAATATTCTTTTTCGGCAATGT‑ACGGATACTCATAGCCCAGAGCAAGCATAATCTCTGTTTAGAGGGCTTCCAttt > 1:394284/1‑250 (MQ=255) cGTGGAAAAGTTGGCTGAGTAACAGGGAGAAAAATCCCTTCTTGTTGCTTATCGTGTCACTACTGTGTGAATTGTCGTCGCTCATGGCGTCGTATGGGTTCTCATGTTAGTTAATCAAAACGCCGTCGTTAATCACCAACGGCGGGGACGTCTGCCAGTCAAATGCCTGGCAAATTATTCTTTCTCGGCAATGT‑ACGGATCCTCATAGCCCAGAGCAAGCATAATCTCTGTTTAGAGGGCTTCCATttct < 1:674638/250‑1 (MQ=255) gTGGAAAAGTTGGCTGAGTAACAGGGAGAAAAATCCCTTCTTGTTGCTTATCGTGTCACTACTGTGTGAATTGTCGTCGCTCATGGCGTCGTATGGGTTCTCATGTTAGTTAATCAAAACGCCGTCGTTAATCACCAACGGCGGGGACGTCTGCCAGTCAAATGCCTGGCAAATTATTCTTTCTCGGCAATGT‑ACGGATCCTCATAGCCCAGAGCAAGCATAATCTCTGTTTAGAGGGCTTCCATttctt < 1:381843/250‑1 (MQ=255) ggAAAAGTTGGCTGAGTAACAGGGAGAAAAATCCCTTCTTGTTGCTTATCGTGTCACTACTGTGTGAATTGTCGTCGCTCATGGCGTCGTATGGGTTCTCATGTTAGTTAATCAAAACGCCGTCGTTAATCACCAACGGCGGGGGCGGCTGCCAGTCAAAAGCCTGGCAAATTATTCTTTCTCGGCAATGT‑ACGGATCCTCATAGCCCAGAGCAAGCATAATCTCTGTTTTGAGGGCCTCCATTtcttct > 1:251766/1‑250 (MQ=255) aaaGTTGGCTGAGTAACAGGGAGAAAAATCCCTTCTTGTTGCTTATCGTGTCACTACTGTGTGAATTGTCGTCGCTCATGGCGTCGTATGGGTTCTCATGTTAGTTAATCAAAACGCCGTCGTTAATCACCAACGGCGGGGGCGTCTGCCAGGCAAATGCCTGGCAAATTATTTTTTTTCGGCAATGT‑ACGGATCCTCATAGCCCAGAGCAAGCATAATCTCTGTTTAGAGGGCTTCCATTTCTTTTGCt > 1:186095/1‑250 (MQ=255) aGTTGGCTGAGTAACAGGGAGAAAAATCCCTTCTTGTTGCTTATCGTGTCACTACTGTGTGAATTGTCGTCGCTCATGGCGTCGTATGGGTTCTCATGTTAGTTAATCAAAACGCCGTCGTTAATCACCAACGGCGGGGACGTCTGCCAGTCAAATGCCTGGCAAATTATTCTTTCTCGGCAATGT‑ACGGATCCTCATAGCCCAGAGCAAGCATAATCTCTGTTTAGAGGGCTTCCATTTCTTCTGCTTc < 1:226744/250‑1 (MQ=255) ttGGCTGAGTAACAGGGAGAAAAATCCCTTCTTGTTGCTTATCGTGTCACTACTGTGTGAATTGTCGTCGCTCATGGCGTCGTATGGGTTCTCATGTTAGTTAATCAAAACGCCGTCGTTAATCACCAACGGCGGGGACGTCTGCCAGTCAAATGCCTGGCAAATTATTCTTTCTCGGCAATGT‑ACGGATCCTCATAGCCCAGAGCAAGCATAATCTCTGTTTAGAGGGCTTCCATTTCTTCTGCTTCGt < 2:29394/250‑1 (MQ=255) aCAGGGAGAAAAATCCCTTCTTGTTGCTTATCGTGTCACTACTGTGTGAATTGTCGTCGCTCATGGCGTCGTATGGGTTCTCATGTTAGTTAATCAAAACGCCGTCGTTAATCACCAACGGCGGGGACGTCTGCCAGTCAAATGCCTGGCAAATTATTCTTTCTCGGCAATGT‑ACGGATCCTCATAGCCCAGAGCAAGCATAATCTCTGTTTAGAGGGCTTCCATTTCTTCTGCTTCGTCATCTTCGAtg < 1:505260/250‑1 (MQ=255) cAGGGAGAAAAATCCCTTCTTGTTGCTTATCGTGTCACTACTGTGTGAATTGTCGTCGCTCATGGCGTCGTATGGGTTCTCATGTTAGTTAATCAAAACGCCGTCGTTAATCACCAACGGCGGGGACGTCTGCCAGTCAAATGCCTGGCAAATTATTCTTTCTCGGCAATGT‑ACGGATCCTCATAGCCCAGAGCAAGCATAATCTCTGTTTAGAGGGCTTCCATTTCTTCTGCTTCGTCATCTTCGAtgt < 1:275452/250‑1 (MQ=255) aGGGAGAAAAATCCCTTCTTGTTGCTTATCGTGTCACTACTGTGTGAATTGTCGTCGCTCATGGCGTCGTATGGGTTCTCATGTTAGTTAATCAAAACGCCGTCGTTAATCACCAACGGCGGGGACGTCTGCCACACAAAAGCCTGGGCAAATATTCTTTCTCGGCCATGT‑TCGGATACCCATAACCCCCAGCAAGACTAATCTCTGTTTTGAGGGCCTCCAATTCTTTTTCTTCGGCATCTTccacttg > 2:574914/1‑244 (MQ=255) gggAGAAAAATCCCTTCTTGTTGCTTATCGTGTCACTACTGTGTGAATTGTCGTCGCTCATGGCGTCGTATGGGTTCTCATGTTAGTTAATCAAAACGCCGTCGTTAATCACCAACGGCGGGGACGTCTGCCAGTCAAATGCCTGGCAAATTATTCTTTCTCGGCAATGT‑ACGGATCCTCATAGCCCAGAGCAAGCATAATCTCTGTTTAGAGGGCTTCCATTTCTTCTGCTTCGTCATCTTCGATGTGa < 1:777036/250‑1 (MQ=255) aaaaaTCCCTTCTTGTTGCTTATCGTGTCACTACTGTGTGAATTGTCGTCGCTCATGGCGTCGTATGGGTTCTCATGTTAGTTAATCAAAACGCCGTCGTTAATCACCAACGGCGGGGGCGTCTTCCAGTCAAAAGCCTTGCAAATTTTTCTTTTTTCGCAATGTAACGGAT‑CTCATTGCCCCGAGCAAGCATAATTTCTGTTTATAGGGCTTCCATTTCTTCTTCTTCGTCATCTTCGATGTGATctt > 2:171337/1‑247 (MQ=255) tCCCTTCTTGTTGCTTATCGTGTCACTACTGTGTGAATTGTCGTCGCTCATGGCGTCGTATGGGTTCTCATGTTAGTTAATCAAAACGCCGTCGTTAATCACCAACGGCGGGGACGTCTGCCAGTCAAATGCCTGGCAAATTATTCTTTCTCGGCAATGT‑ACGGATCCTCATAGCCCAGAGCAAGCATAATCTCTGTTTAGAGGGCTTCCATTTCTTCTGCTTCGTCATCTTCGATGTGATCGTAACCTa < 2:214664/250‑1 (MQ=255) gCTTATCGTGTCACTACTGTGTGAATTGTCGTCGCTCATGGCGTCGTATGGGTTCTCATGTTAGTTAATCAAAACGCCGTCGTTAATCACCAACGGCGGGGACGTCTGCCAGTCAAATGCCTGGCAAATTATTCTTTCTCGGCAATGT‑ACGGATCCTCATAGCCCAGAGCAAGCATAATCTCTGTTTAGAGGGCTTCCCTTTCTTCTGCTTCGTCATCTTCGATGTGATCGTAACCTAACAAATGCAGAc > 1:26036/1‑250 (MQ=255) cTTATCGTGTCACTACTGTGTGAATTGTCGTCGCTCATGGCGTCGTATGGGTTCTCATGTTAGTTAATCAAAACGCCGTCGTTAATCACCAACGGCGGGGACGTCTGCCAGTCAAATGCCTGGCAAATTATTCTTTCTCGGCAATGT‑ACGGATCCTCATAGCCCAGAGCAAGCATAATCTCTGTTTAGAGGGCTTCCATTTCTTCTGCTTCGTCATCTTCGATGTGATCGTAACCTAACAAATGCAGAc < 1:602985/249‑1 (MQ=255) cTTATCGTGTCACTACTGTGTGAATTGTCGTCGCTCATGGCGTCGTATGGGTTCTCATGTTAGTTAATCAAAACGCCGTCGTTAATCACCAACGGCGGGGACGTCTGCCAGTCAAATGCCTGGCAAATTATTCTTTCTCGGCAATGT‑ACGGATCCTCATAGCCCAGAGCAAGCATAATCTCTGTTTAGAGGGCTTCCATTTCTTCTGCTTCGTCATCTTCGATGTGATCGTAACCTAACAAATGCAGACt < 1:302224/250‑1 (MQ=255) tCGTGTCACTACTGTGTGAATTGTCGTCGCTCATGGCGTCGTATGGGTTCTCATGTTAGTTAATCAAAACGCCGTCGTTAATCACCAACGGCGGGGACGTCTGCCAGTCAAATGCCTGGCAAATTATTCTTTCTCGGCAATGT‑ACGGATCCTCATAGCCCAGAGCAAGCATAATCTCTGTTTAGAGGGCTTCCATTTCTTCTGCTTCGTCATCTTCGATGTGATCGTAACCTAACAAATGCAGACTGCCg < 2:385547/250‑1 (MQ=255) tgtCACTACTGTGTGAATTGTCGTCGCTCATGGCGTCGTATGGGTTCTCATGTTAGTTAATCAAAACGCCGTCGTTAATCACCAACGGCGGGGACGTCTGCCAGTCAAATGCCTGGCAAATTATTCTTTCTCGGCAATGT‑ACGGATCCTCATAGCCCAGAGCAAGCATAATCTCTGTTTAGAGGGCTTCCATTTCTTCTGCTTCGTCATCTTCGATGTGATCGTAACCTAACAAATGCAGACTGCCGTGc < 1:602809/250‑1 (MQ=255) ctGTGTGAATGGTCGTCGCTCATGGCGTCGTATGGGTTCTCATGTTAGTTAATCAAAACGCCGTCGTTAATCACCAACGGCGGGGACGTCTGCCAGTCAAATGCCTGGCAAATTATTCTTTCTCGGCAATGT‑ACGGATCCTCATAGCCCAGAGCAAGCATAATCTCTGTTTAGAGGGCTTCCATTTCTTCTGCTTCGTCATCTTCGATGTGATCGTAACCTAACAAATGCAGACTGCCGTGCACCACCat < 2:463015/250‑1 (MQ=255) tgtgAATTGTCGTCGCTCATGGCGTCGTATGGGTTCTCATGTTAGTTAATCAAAACGCCGTCGTTAATCACCAACGGCGGGGACGTCTGCCAGTCAAATGCCTGGCAAATTATTCTTTCTCGGCAATGT‑ACGGATCCTCATAGCCCAGAGCAAGCATAATCTCTGTTTAGAGGGCTTCCATTTCTTCTGCTTCGTCATCTTCGATGTGATCGTAACCTAACAAATGCAGACTGCCGTGCACCACCatat < 2:394095/249‑1 (MQ=255) ttgAATTGTCGTCGCTCATGGCTTCGTATGGGTTCTCATGTTAGTTAATCAAAACGCCGTCGTTAATCACCAACGGCGGGGACGTCTGCCAGTCAAATGCCTGGCAAATTATTCTTTCTCGGCAATGT‑ACGGATCCTCATAGCCCAGAGCAAGCATAATCTCTGTTTAGAGGGCTTCCATTTCTTCTGCTTCGTCATCTTCGATGTGATCGTAACCTAACAAATGCAGACTGCCGTGCACCACCATATg < 2:416793/248‑1 (MQ=255) tGTCGGCGCTCATGGCGTCGTATGTGTTCTCATGTTAGTTAATCAAAACGGCGTCGTTAATCGCCAACGGCGGGGACGTCTGCCAGTCAAATGCCTGGCAAATTATTCTTTCTCGGCAATGT‑ACGGATCCTCATAGCCCAGAGCAAGCATAATCTCTGTTTAGAGGGCTTCCATTTCTTCTGCTTCGTCATCTTCGATGTGATCGTAACCTAACAAATGCAGACTGCCGTGCACCACCATATGCGCCCa < 2:768021/249‑1 (MQ=255) ctcgCTCATGGCGTCGTATGGGTTCTCATGTTAGTTAATCAAAACGCCGTCGTTAATCACCAACGGCGGGGACGTCTGCCAGTCAAATGCCTGGCAAATTATTCTTTCTCGGCAATGT‑ACGGATCCTCATAGCCCAGAGCAAGCATAATCTCTGTTTAGAGGGCTTCCATTTCTTCTGCTTCGTCATCTTCGATGTGATCGTAACCTa < 1:399051/207‑1 (MQ=255) tCATGGCGTCGTATGGGTTCTCATGTTAGTTAATCAAAACGCCGTCGTTAATCACCAACGGCGGGGGCGTCTGCCCGTCAAATGCCTGGCAAATTATTCTTTCTCGGCAATGT‑ACGGATCCTCATAGCCCAGAGCAAGCATAATCTCTGTTTAGAGGGCTTCCATTTCTTCTGCTTCGTCATCTTCGATGTGATCGTAACCTAACAAATGCAGACTGCCGTGCACCACCATATGCGCCCAGTGCGCCTcc > 1:10365/1‑250 (MQ=255) aTGGCGTCGTATGGGTTCTCATGTTAGTTAATCAAAACGCCGTCGTTAATCACCAACGGCGGGGACGTCTGCCAGTCAAATGCCTGGCAAATTATTCTTTCTCGGCAATGT‑ACGGATCCTCATAGCCCAGAGCAAGCATAATCTCTGTTTAGAGGGCTTCCATTTCTTCTTCTTCGTCATCTTCGATGTGATCGTAACCTAACAAATGCAGACTGCCGTGCACCACCATATGCGCCCCGTGCGCCCCCAg > 1:594302/1‑250 (MQ=255) tcgtATGGGTTCTCATGTTAGTTAATCAAAACGCCGTCGTTAATCACCAACGGCGGGGACGTCTGCCAGTCAAATGCCTGGCAAATTATTCTTTCTCGGCAATGT‑ACGGATCCTCATAGCCCAGAGCAAGCATAATCTCTGTTTAGAGGGCTTCCATTTCTTCTGCTTCGTCATCTTCGATGTGATCGTAACCTAACAAATGCAGACTGCCGTGCACCACCATATGCGCCCAGTGCGCCTCCAGTGGttt < 2:722651/250‑1 (MQ=255) tATGGGTTCTCATGTTAGTTAATCAAAACGCCGTCGTTAATCACCAACGGCGGGGACGTCTGCCAGTCAAATGCCTGGCAAATTATTCTTTCTCGGCAATGT‑ACGGATCCTCATAGCCCAGAGCAAGCATAATCTCTGTTTAGAGGGCTTCCATTTCTTCTGCTTCGTCATCTTCGATGTGATCGTAACCTAACAAATGCAGACTGCCGTGCACCACCATATGCGCCCAGTGCGCCTCCAGTGGTTTGcc < 1:614482/250‑1 (MQ=255) ggTTCTCATGTTAGTTAATCAAAACGCCGTCGTTAATCACCAACGGCGGGGGAGTATGGCCGGCCAAAGCCTCGCAAAATATTTTTTCTCGGCAATGG‑ACGGGCCCCCATCACCCCGAGCAAACAAAATCTCTGTTTTTAGGGGCTCCCTTTCTTCTCTTTCTTCTTCTTCCATGTGTTCGTAACCGATAAAATACAGACCTCCGCTCCCCACCAAATGCGCCCAGTGGGCCCCCAGCGGTTTGCCtttc > 2:547903/1‑248 (MQ=255) ctcATGTTAGTTAATCAAAACGCCGTCGTTAATCACCAACGGCGGGGACGTCTTCCAGTCAAATGCCTGGCAAATTATTTTTTCTCGGCCATGT‑ACGGATCCTCATAGCCCAAAGCAAGCATAATCTCTGTTTATTGGGGTTTCATTTCTTCTGCTTCTTCATCTTCGATGTTATCGTAACCTAACAAAAGAAGACTGCCGTGCACCCCCATATTTGCCCACTGCGCCTCCCCAGGGTTTCCTtcctccc > 2:442921/1‑249 (MQ=255) ttagttaATCAAAACGCCGTCGTTAATCACCAACGGCGGGGACGTCTGCCAGTCAAATGCCTGGCAAATTATTCTTTCTCGGCAATGT‑ACGGATCCTCATAGCCCAGAGCAAGCATAATCTCTGTTTAGAGGGCTTCCATTTCTTCTGCTTCGTCATCTTCGATGTGATCGTAACCTAACAAATGCAGACTGCCGTGCACCACCATATGCGCCCAGTGCGCCTCCAGTGGTTTGCCTTGCTCCTGAGctt < 2:225806/250‑1 (MQ=255) tagttaATCAAAACGCCGTCGTTAATCACCAACGGCGGGGACGTCTGCCAGTCAAAAGCCTGGCAAAATATTTTTTTTCGGCAATGG‑ACGGATCCTCATAGCCCAGAGCAAGCATAAACTCTGTTTTGAGGGGTTCCATTTCTTCTGCTTCGTCATCTTTGATGTGATCGTAAACTAAAAAAAGCAGAATGCCGTGCACCACCATATTCGCCCAGGGCGCCCCCAGTGGGTTGCCTTGCTCCCGCGcttc > 2:651778/1‑250 (MQ=255) gttaATCAAAACGCCGTCGTTAATCACCAACGGCGGGGACGTCTGCCAGTCAAATGCCTGGCAAATTATTCTTTCTCGGCAATGT‑ACGGATCCTCATAGCCCAGAGCAAGCATAATCTCTGTTTAGAGGGCTTCCATTTCTTCTGCTTCGTCATCTTCGATGTGATCGTAACCTAACAAATGCAGACTGCCGTGCACCACCATATGCGCCCAGTGCGCCTCCAGTGGTTTGCCTTGCTCCTGAGcttcct < 1:646278/250‑1 (MQ=255) gtTAATCACCAACGGCGGGGACGTCTGCCAGTCAAATGCCTGGCAAATTATTCTTTCTCGGCAATGT‑ACGGATCCTCATAGCCCAGAGCAAGCATAATCTCTGTTTAGAGGGCTTCCATTTCTTCTGCTTCGTCATCTTCGATGTGATCGTAACCTAACAAATGCAGACTGCCGTGCACCACCATATGCGCCCAGTGCGCCTCCAGTGGTTTGCCTTGCTCCTGAGCTTCCTTCTCAACCACCTGACGGc < 2:141650/250‑1 (MQ=255) gtTAATCACCAACGGCGGGGACGTCTGCCAGTCAAATGCCTGGCAAATTATTCTTTCTCGGCAATGT‑ACGGATCCTCATAGCCCAGAGCAAGCATAATCGCTGTTTAGAGGGCTTCCATTTCTTCTGCTTCGTCATCTTCGATGTGATCGTAACCTAACAAATGCAGACTGCCGTGCACCACCATATGCGCCCAGTGCGCCTCCAGTGGTTTGCCTTGCTCCTGAGCTTCCTTCTCAACCACCTGACgg < 1:253522/249‑1 (MQ=255) aTCACCAACGGCGGGGAAGTCTGCCCGTCAAATACCCTGCAAATTATTCTTTCTCGGCAATGT‑ACGGATCCTCATAGCCCAGAGCAAGCAAAAACTCTGTTTAGAGGGCTTCCCTTTCTTCTCCTTCGTCATCTTTGATTTGCTCTTAACCTAACAAAAGCAGACTGCCGTGCACCACCACATGCGCCCAGAGAGCCCCCACTGGTTTGCCCTGCTCCTGAGCCTCCTTCCCACCCCCCTCACCGCAGa > 2:474974/1‑249 (MQ=255) gcggGGACGTCTGCCAGTCAAATGCCTGGCAAATTATTCTTTCTCGGCAATGT‑ACGGATCCTCATAGCCCAGAGCAAGCATAATCTCTGTTTAGAGGGCTTCCATTTCTTCTGCTTCGTCATCTTCGATGTGATCGTAACCTAACAAATGCAGACTGCCGTGCACCACCATATGCGCCCAGTGCGCCTCCAGTGGTTTGCCTTGCTCCTGAGCTTCCTTCTCAACCACCTGACGGCAGATAACCAGATCg > 2:770340/1‑250 (MQ=255) ggggACGTCTGCCAGTCAAATGCCTGGCAAATTATTCTTTCTCGGCAATGT‑ACGGATCCTCATAGCCCAGAGCAAGCATAATCTCTGTTTAGAGGGCTTCCATTTCTTCTGCTTCGTCATCTTCGATGTGATCGTAACCTAACAAATGCAGACTGCCGTGCACCACCATATGCGCCCAGTGCGCCTCCAGTGGTTTGCCTTGCTCCTGAGCTTCCTTCTCAACCACCTGACGGCAGATAACCAGATCGcc > 2:39323/1‑250 (MQ=255) ggACGTCTGCCAGTCAAATGCCTGGCAAATTATTCTTTCTCGGCAATGT‑ACGGATCCTCATAGCCCAGAGCAAGCATAATCTCTGTTTAGAGGGCTTCCATTTCTTCTGCTTCGTCATCTTCGATGTGATCGTAACCTAACAAATGCAGACTGCCGTGCACCACCATATGCGCCCAGTGCGCCTCCAGTGGTTTGCCTTGCTCCTGAGCTTCCTTCTCAACCACCTGACGGCAGATAACCAGATCGCCCa < 2:652041/250‑1 (MQ=255) gTCTGCCAGTCAAATGCCTGGCAAATTATTCTTTCTCGGCAATGT‑ACGGATCCTCATAGCCCAGAGCAAGCATAATCTCTGTTTAGAGGGCTTCCATTTCTTCTGCTTCGTCATCTTCGATGTGATCGTAACCTAACAAATGCAGACTGCCGTGCACCACCATATGCGCCCAGTGCGCCTCCAGTGGTTTGCCTTGCTCCTGAGCTTCCTTCTCAACCACCTGCCGGCAGATAACCAGATCGCCCAGTAg > 2:420965/1‑250 (MQ=255) tCTGCCAGTCAAATGCCTGGCAAATTATTCTTTCTCGGCAATGT‑ACGGATCCTCATAGCCCAGAGCAAGCATAATCTCTGTTTAGAGGGCTTCCATTTCTTCTGCTTCGTCATCTTCGATGTGATCGTAACCTAACAAATGCAGACTGCCGTGCACCACCATATGCGCCCAGTGCGCCTCCAGTGGTTTGCCTTGCTCCTGAGCTTCCTTCTCAACCACCTGACGGCAGATAACCAGATCGCCCAGTAGc > 1:794086/1‑250 (MQ=255) ccAGTCAAATGCCTGGCAAATTATTCTTTCTCGGCAATGT‑ACGGATCCTCATAGCCCAGAGCAAGCATAATCTCTGTTTAGAGGGCTTCCATTTCTTCTGCTTCGTCATCTTCGATGTGATCGTAACCTAACAAATGCAGACTGCCGTGCACCACCATATGCGCCCAGTGCGCCTCCAGTGGTTTGCCTTGCTCCTGAGCTTCCTTCTCAACCACCTGACGGCAGATAACCAGATCGCCCAGTAGCg < 1:451416/247‑1 (MQ=255) tCAAATGCCTGGCAAATTATTCTTTCTCTGCAATGT‑ACGTATCCTCATAGCCCATATCAAGCATAATCTCTGTTTAGAGGGCTTCCATTTCTTCTGCTTCGTCATCTTCGATGTGATCGTAACCTAACAAATGCAGACTGCCGTGCACCACCATATGCGCCCAGTGCGCCTCCAGTGGTTTGCCTTGCTCCTGAGCTTCCTTCTCAACCACCTGACGGCAGATAACCAGATCGCCCAGTAGCGACATTTc < 2:673722/250‑1 (MQ=255) tCAAATGCCTGGCAAATTATTCTTTCTCGGCAATGT‑ACGGATCCTCATAGCCCAGAGCAAGCATAATCTCTGTTTAGAGGGCTTCCATTTCTTCTGCTTCGTCATCTTCGATGTGATCGTAACCTAACAAATGCAGACTGCCGTGCACCACCATATGCGCCCAGTGCGCCTCCAGTGGTTTGCCTTGCTCCTGAGCTTCCTTCTCAACCACCTGACGGCAGATAACCAGATCGCCCAGTAGCGACATTTc > 1:118598/1‑250 (MQ=255) cAAATGCCTGGCAAATTATTCTTTCTCGGCAATGT‑ACGGATCCTCATAGCCCAGAGCAAGCATAATCTCTGTTTAGAGGGCTTCCATTTCTTCTGCTTCGTCATCTTCGATGTGATCGTAACCTAACAAATGCAGACTGCCGTGCACCACCATATGCGCCCAGTGCGCCTCCAGTGGTTTGCCTTGCTCCTGAGCTTCCTTCTCAACCACCTGACGGCAGATAACCAGATCGCCCAGTAGCGACATTTc > 1:442725/1‑249 (MQ=255) aaaTGCCTGGCAAATTATTCTTTCTCGGCAATGT‑ACGGATCCTCATAGCCCAGAGCAAGCATAATCTCTGTTTAGAGGGCTTCCATTTCTTCTGCTTCGTCATCTTCGATGTGATCGTAACCTAACAAATGCAGACTGCCGTGCACCACCATATGCGCCCAGTGCGCCTCCAGTGGTTTGCCTTGCTCCTGAGCTTCCTTCTCAACCACCTGACGGCAGATAACCAGATCGCCCAGTAGCGACATTTCCa > 1:838361/1‑250 (MQ=255) aaaTGCCTGGCAAATAATTCTTTCTCGGCAATGT‑ACGGATCCTCATAGCCCAGAGCAAGCATAATCTCTGTTTAGAGGGCTTCCATTTCTTCTGCTTCGTCATCTTCGATGTGATCGTAACCTAACAAATGCAGACTGCCGTGCACCACCATATGCGCCCAGTGCGCCTCCAGTGGTTTGCCTTGCTCCTGAGCTTCCTTCTCAACCACCTGACGGCAGATAACCAGATCGCCCAGTAGCGACATTTcc < 1:202865/249‑1 (MQ=255) cAAATTATTCTTTCTCGGCAATGT‑ACGGATCCTCATAGCCCAGAGCAAGCATAATCTCTGTTTAGAGGGCTTCCATTTCTTCTGCTTCGTCATCTTCGATGTGATCGTAACCTAACAAATGCAGACTGCCGTGCACCACCATATGCGCCCAGTGCGCCTCCAGTGGTTTGCCTTGCTCCTGAGCTTCCTTCTCAACCACCTGACGGCAGATAACCAGATCGCCCAGTAGCGACATTTCCATGCCAggcgg > 2:647977/1‑250 (MQ=255) cAAATTATTCTTTCTCGGCAATGT‑ACGGATCCTCATAGCCCAGAGCAAGCATAATCTCTGTTTAGAGGGCTTCCATTTCTTCTGCTTCGTCATCTTCGATGTGATCGTAACCTAACAAATGCAGACTGCCGTGCACCACCATATGCGCCCAGTGCGCCTCCAGTGGTTTGCCTTGCTCCTGAGCTTCCTTCTCAACCACCTGACGGCAGATAACCAGATCGCCCAGTAGCGACATTTCCATGCCAggcgg < 1:241539/250‑1 (MQ=255) attCTTTCTCGGCAATGT‑ACGGATCCTCATAGCCCAGAGCAAGCATAATCTCTGTTTAGAGGGCTTCCATTTCTTCTGCTTCGTCATCTTCGATGTGATCGTAACCTAACAAATGCAGACTGCCGTGCACCACCATATGCGCCCAGTGCGCCCCCAGTGGTTTGCCTTGCTCCTGAGCTTCCTTCTCAACCACCTGACGGCAGATAACCAGATCGCCCAGTAGCGACATTTCCATGCCAGGCGGCACtt > 2:11042/1‑249 (MQ=255) attCTTTCTCGGCAATGT‑ACGGATCCTCATAGCCCAGAGCAAGCATAATCTCTGTTTAGAGGGCTTCCATTTCTTCTGCTTCGTAATCTTCGATGTGATCGTAACCTAACAAATGCAGACTGCCGTGCACCACCATATGCGCCCAGTGCGCCTCCAGTGGTTTGCCTTGCTCCTGAGCTTCCTTCTCAACCACCTGACGGCAGATAACCAGATCGCCCAGTAGCGACATTTCCATGCCAGGCGGCACtt < 1:80522/249‑1 (MQ=255) ctttctCGGCAATGT‑ACGGATCCTCATAGCCCAGAGCAAGCATAATCTCTGTTTAGAGGGCTTCCATTTCTTCTGCTTCGTCATCTTCGATGTGATCGTAACCTAACAAATGCAGACTGCCGTGCACCACCATATGCGCCCAGTGCGCCTCCAGTGGTTTGCCTTGCTCCTGAGCTTCCTTCTCAACCACCTGACGGCAGATAACCAGATCGCCCAGTAGCGACATTTCCATGCCAGGCGGCACTTCaaa > 2:46123/1‑250 (MQ=255) ctcGGCAATGT‑ACGGATCCTCATAGCCCAGAGCAAGCATAATCTCTGTTTAGAGGGCTTCCATTTCTTCTGCTTCGTCATCTTCGATGTGATCGTAACCTAACAAATGCAGACTGCCGTGCACCACCATATGCGCCCAGTGCGCCTCCAGTGGTTTGCCTTGCTCCTGAGCTTCCTTCTCAACCACCTGACGGCAGATAACCAGATCGCCCAGTAGCGACATTTCCATGCCAGGCGGCACTTCAAACgg > 2:608075/1‑249 (MQ=255) ctcGGCAATGT‑ACGGATCCTCATAGCCCAGAGCAAGCATAATCTCTGTTTAGAGGGCTTCCATTTCTTCTGCTTCGTCATCTTCGATGTGATCGTAACCTAACAAATGCAGACTGCCGTGCACCACCATATGCGCCCAGTGCGCCTCCAGTGGTTTGCCTTGCTCCTGAGCTTCCTTCTCAACCACCTGACGGCAGATAACCAGATCGCCCAGTAGCGAAATTTCCATGCCAGGCGGCACTTCAAACgg > 2:734936/1‑249 (MQ=255) tcGGCAATGT‑ACGGATCCTCATAGCCCAGAGCAAGCATAATCTCTGTTTAGAGGGCTTCCATTTCTTCTGCTTCGTCATCTTCGATGTGATCGTAACCTAACAAATGCAGACTGCCGTGCACCACCATATGCGCCCAGTGCGCCTCCAGTGGTTTGCCTTGCTCCTGAGCTTCCTTCTCAACCACCTGACGGCAGATAACCAGATCGCCCAGTAGCGACATTTCCATGCCAGGCGGCACTTCAAACggg > 2:362324/1‑249 (MQ=255) ggCAATGT‑ACGGATCCTCATAGCCCAGAGCAAGCATAATCTCTGTTTAGAGGGCTTCCATTTCTTCTGCTTCGTCATCTTCGATGTGATCGTAACCTAACAAATGCAGACTGCCGTGCACCACCATATGCGCCCAGTGCGCCTCCAGTGGTTTGCCTTGCTCCTGAGCTTCCTTCTCAACCACCTGACGGCAGATAACCAGATCGCCCAGTAGCGACATTTCCATGCCAGGCGGCACTTCAAACggg < 1:716388/247‑1 (MQ=255) aTGT‑ACGGATCCTCATAGCCCAGAGCAAGCATAATCTCTGTTTAGAGGGCTTCCATTTCTTCTGCTTCGTCATCTTCGATGTGATCGTAACCTAACAAATGCAGACTGCCGTGCACCACCATATGCGCCCAGTGCGCCTCCAGTGGTTTGCCTTGCTCCTGAGCTTCCTTCTCAACCACCTGACGGCAGATAACCAGATCGCCCAGTAGCGACATTTCCATGCCAGGCGGCACTTCAAACGGGAAGga > 1:57225/1‑248 (MQ=255) tGT‑ACGGATCCTCATAGCCCAGAGCAAGCATAATCTCTGTTTAGAGGGCTTCCATTTCTTCTGCTTCGTCATCTTCGATGTGATCGTAACCTAACAAATGCAGACTGCCGTGCACCACCATATGCGCCCAGTGCGCCTCCAGTGGTTTGCCTTGCTCCTGAGCTTCCTTCTCAACCACCTGACGGCAGATAACCAGATCGCCCAGTAGCGACATTTCCATGCCAGGCGGCACTTCAAACGGGAAGGagag > 1:480270/1‑250 (MQ=255) cTCATAGCCCAGAGCAAGCATAATCTCTGTTTAGAGGGCTTCCATTTCTTCTGCTTCGTCATCTTCGATGTGATCGTAACCTAACAAATGCAGACTGCCGTGCACCACCATATGCGCCCAGTGCGCCTCCAGTGGTTTGCCTTGCTCCTGAGCTTCCTTCTCAACCACCTGACGGCAGTTAACCAGATCGCCCAGTAGCGACATTTCCATGCCAGGCGGCACTTCAAACGGGAAGGAGAGCACGTTGGTc > 2:109686/1‑250 (MQ=255) cTCATAGCCCAGAGCAAGCATAATCTCTGTTTAGAGGGCTTCCATTTCTTCTGCTTCGTCATCTTCGATGTGATCGTAACCTAACAAATGCAGACTGCCGTGCACCACCATATGCGCCCAGTGCGCCTCCAGTGGTTTGCCTTGCTCCTGAGCTTCCTTCTCAACCACCTGACGGCAGATAACCAGATCGCCCAGTAGCGACATTTCCATGCCAGGCGGCACTTCAAACGGGAAGGAGAGCACGTTGGTc > 1:826011/1‑250 (MQ=255) aTAGCCCAGAGCAAGCATAATCTCTGTTTAGAGGGCTTCCATTTCTTCTGCTTCGTCATCTTCGATGTGATCGTAACCTAACAAATGCAGACTGCCGTGCTCCACCATATGCGCCCAGTGCGCCTCCAGTGGTTTGCCTTGCTCCTGAGCTCCCTTCTCAACCACCTGACGGCAGATAACCAGATCGCCCAGTAGCGACATTTCCATGCCAGGCGGCACTTCAAACGGGAAGGAGAGCACGTTGGTCg < 1:757786/248‑1 (MQ=255) aGCCCAGAGCAAGCATAATCTCTGTTTAGAGGGCTTCCATTTCTTCTGCTTCGTCATCTTCGATGTGATCGTAACCTAACAAATGCAGACTGCCGTGCACCACCATATGCGCCCAGTGCGCCTCCAGTGGTTTGCCTTGCTCCTGAGCTTCCTTCTCAACCACCTGACGGCAGATAACCAGATCGCCCAGTAGCGACATTTCCATGCCAGGCGGCACTTCAAACGGGAAGGAGAGCAAGTTGGTCGGCt > 2:704385/1‑249 (MQ=255) cAGAGCAAGCATAATCTCTGTTTAGAGGGCTTCCATTTCTTCTGCTTCGTCATCTTCGATGTGATCGTAACCTAACAAATGCAGACTGCCGTGCACCACCATATGCGCCCAGTGCGCCTCCAGTGGTTTGCCTTGCTCCTGAGCTTCCTTCTCAACCACCTGACGGCAGATAACCAGATCGCCCAGTAGCGACATTTCCATGCCAGGCGGCACTTCAAACGGGAAGGAGAGCACGTTGGTCGGCTTATcc > 1:810258/1‑250 (MQ=255) agagCAAGCATAATCTCTGTTTAGAGGGCTTCCATTTCTTCTGCTTCGTCATCTTCGATGTGATCGTAACCTAACAAATGCAGACTGCCGTGCACCACCATATGCGCCCAGTGCGCCTCCAGTGGTTTGCCTTGCTCCTGAGCTTCCTTCTCAACCACCTGACGGCAGATAACCAGATCGCCCAGTAGCGACATTTCCATGCCAGGCGGCACTTCAAACGGGAAGGAGAGCACGTTGGTCGGCTTATCCt < 1:493748/250‑1 (MQ=255) gcaagcaTAATCTCTGTTTAGAGGGCTTCCATTTCTTCTGCTTCGTCATCTTCGATGTGATCGTAGCCTAACAAATGCAGACTGCCGTGCACCACCATATGCGCCCAGTGCGCCTCCAGTGGTTTGCCTTGCTCCTGAGCTTCCTTCTCAACCACCTGACGGCAGATAACCAGATCGCCCAGTAGCGACATTTCCATGCCAGGCGGCACTTCAAACGGGAAGGAGAGCACGTTGGTCGGCTTATCCTTAc > 2:263687/1‑250 (MQ=255) gcaagcaTAATCTCTGTTTAGAGGGCTTCCATTTCTTCTGCTTCGTCATCTTCGATGTGATCGTAACCTAACAAATGCAGACTGCCGTGCACCACCATATGCGCCCAGTGCGCCTCCAGTGGTTTGCCTTGCTCCTGAGCTTCCTTCTCAACCACCTGACGGCAGATAACCAGATCGCCCAGTAGCGACATTTCCATGCCAGGCGGCACTTCAAACGGGAAGGAGAGCACGTTGGTCGGCTTATCCTTAc < 1:237620/250‑1 (MQ=255) agcaTAATCTCTGTTTAGAGGGCTTCCATTTCTTCTGCTTCGTCATCTTCGATGTGATCGTAACCTAACAAATGCAGACTGCCGTGCACCACCATATGCGCCCAGTGCGCCTCCAGTGGTTTGCCTTGCTCCTGAGCTTCCTTCTCAACCACCTGACGGCAGATAACCAGATCGCCCAGTAGCGACATTTCCATGCCAGGCGGCACTTCAAACGGGAAGGAGAGCACGTTGGTCGGCTTATCCTTACcgc < 2:186095/250‑1 (MQ=255) caTAATCTCTGTTTAGAGGGCTTCCATTTCTTCTGCTTCGTCATCTTCGATGTGATCGTAACCTAACAAATGCAGACTGCCGTGCACCACCATATGCGCCCAGTGCGCCTCCAGTGGTTTGCCTTGCTCCTGAGCTTCCTTCTCAACCACCTGACGGCAGATAACCAGATCGCCCAGTAGCGACATTTCCATGCCAGGCGGCACTTCAAACGGGAAGGAGAGCACGTTGGTCGGCTTATCCTTACCGCGa < 1:406910/250‑1 (MQ=255) caTAATCTCTGTTTAGAGGGCTTCCATTTCTTCTGCTTCGTCATCTTCGATGTGATCGTAACCTAACAAATGCAGACTGCCGTGCACCACCATATGCGCCCAGTGCGCCTCCAGTGGTTTGCCTTGCTCCTGAGCTTCCTTCTCAACCACCTGACGGCAGATAACCAGATCGCCCAGTAGCGACATTTCCATGCCAGGCGGCACTTCAAACGGGAAGGAGAGCACGTTGGTCGGCTTATCCTTACCGCGa > 1:116398/1‑250 (MQ=255) tctGTTTAGAGGGCTTCCATTTCTTCTGCTTCGTCATCTTCGATGTGATCGTAACCTAACAAATGCAGACTGCCGTGCACCACCATATGCGCCCAGTGCGCCTCCAGTGGTTTGCCTTGCTCCTGAGCTTCCTTCTCAACCACCTGACGGCAGATAACCAGATCGCCCAGTAGCGACATTTCCATGCCAGGCGGCACTTCAAACGGGAAGGAGAGCACGTTGGTCGGCTTATCCTTACCGCGATAGGt > 1:785574/1‑248 (MQ=255) tctGTTTAGAGGGCTTCCATTTCTTCTGCTTCGTCATCTTCGATGTGATCGTAACCTAACAAATGCAGACTGCCGTGCACCACCATATGCGCCCAGTGCGCCTCCAGTGGTTTGCCTTGCTCCTGAGCTTCCTTCTCAACCACCTGACGGCAGATAACCAGATCGCCCAGTAGCGACATTTCCATGCCAGGCGGCACTTCAAACGGGAAGGAGAGCACGTTGGTCGGCTTATCCTTACCGCGATAGGt > 1:173727/1‑248 (MQ=255) | TTTTCGGTTCACCGTGGAAAAGTTGGCTGAGTAACAGGGAGAAAAATCCCTTCTTGTTGCTTATCGTGTCACTACTGTGTGAATTGTCGTCGCTCATGGCGTCGTATGGGTTCTCATGTTAGTTAATCAAAACGCCGTCGTTAATCACCAACGGCGGGGACGTCTGCCAGTCAAATGCCTGGCAAATTATTCTTTCTCGGCAATGT‑ACGGATCCTCATAGCCCAGAGCAAGCATAATCTCTGTTTCGAGGGCTTCCATTTCTTCTGCTTCGTCATCTTCGATGTGATCGTAACCTAACAAATGCAGACTGCCGTGCACCACCATATGCGCCCAGTGCGCCTCCAGTGGTTTGCCTTGCTCCTGAGCTTCCTTCTCAACCACCTGACGGCAGATAACCAGATCGCCCAGTAGCGACATTTCCATGCCAGGCGGCACTTCAAACGGGAAGGAGAGCACGTTGGTCGGCTTATCCTTACCGCGATAGGT > NZ_CP009273/687144‑687629 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 24 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |