Read alignment evidence... | |||||||||||
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seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
* | NZ_CP009273 | 2,821,865 | 0 | T | G | 36.2% | 108.2 / 26.4 | 80 | V257G (GTG→GGG) | srlD | sorbitol‑6‑phosphate dehydrogenase |
Reads supporting (aligned to +/- strand): ref base T (14/37); new base G (28/1); total (42/38) | |||||||||||
Fisher's exact test for biased strand distribution p-value = 5.92e-10 | |||||||||||
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Rejected as consensus: Frequency below/above cutoff threshold. |
TACGGCATTACGGTGCATTCACTGATGCTCGGTAACCTGCTGAAATCGCCGATGTTCCAGTCACTGTTGCCACAATACGCGACCAAGCTGGGTATCAAACCGGATCAAGTCGAGCAGTATTACATCGACAAAGTACCGCTCAAACGCGGCTGCGATTATCAAGATGTG‑CTGAATATGCTGCTGTTCTACGCCAGTCCTAAGGCGTCGTACTGCACCGGACAGTCGATCAATGTCACCGGCGGTCAGGTGATGTTCTGATCAACAGCGGAGATCCATTAAGGATCTCCGTGAGACTATAGAATGCCTGATGCGCTACGCTCATCAGGCATACAGGACTTCCGCCACTACATTAAGGAAAAGTTATGGTATCCGCACTCATCACCGTCGCCGTTATCGCCTGGTGTGCGCAACTGGCCTTAGGCGGCTGGCAAATTTCTCGTTTTAACCGTGCCTTCGACACACTATGCCAGCAAGGGCGGGTTGGCGTGGGCCGTT > NZ_CP009273/2821618‑2822112 | tACGGCATTACGGTGCATTCACTGATGCTCGGTAACCTGCTGAAATCGCCGATGTTCCAGTCACTGTTGCCACAATACGCGACCAAGCTGGGTATCAAACCGGATCAAGTCGAGCAGTATTACATCGACAAAGTACCGCTCAAACGCGGCTGCGATTATCAAGATGTG‑CTGAATATGCTGCTGTTCTACGCCAGTCCTAAGGCGTCGTACTGCACCGGACAGTCGATCAATGTCACCGGCGGTCAGGGGa > 1:385869/1‑250 (MQ=255) gCATTACGGTGCATTCACTGATGCTCGGTAACCTGCTGAAATCGCCGATGTTCCAGTCACTGTTGCCACAATACGCGACCAAGCTGGGTATCAAACCGGATCAAGTCGAGCAGTATTACATCGACAAAGTACCGCTCAAACGCGGCTGCGATTATCAAGATGTG‑CTGAATATGCTGCTGTTCTACGCCAGTCCTAAGGCGTCGTACTGCACCGGACAGTCGATCAATGTCACCGGCGGTCAGGTGATGtt < 2:514689/250‑1 (MQ=255) aTTACGGTGCATTCACTGATGCTCGGTAACCTGCTGAAATCGCCGATGTTCCAGTCACTGTTGCCACAATACGCGACCAAGCTGGGTATCAAACCGGATCAAGTCGAGCAGTATTACATCGACAAAGTACCGCTCAAACGCGGCTGCGATTATCAAGATGTG‑CTGAATATGCTGCTGTTCTACGCCAGTCCTAAGGCGTCGTACTGCACCGGACAGTCGATCAATGTCACCGGCGGTCAGGTGATGTTCt < 2:599772/250‑1 (MQ=255) aTTACGGTGCATTCACTGATGCTCGGTAACCTGCTGAAATCGCCGATGTTCCAGTCACTGTTGCCACAATACGCGACCAAGCTGGGTATCAAACCGGATCAAGTCGAGCAGTATTACATCGACAAAGTACCGCTCAAACGCGGCTGCGATTATCAAGATGTG‑CTGAATATGCTGCTGTTCTACGCCAGTCCTAAGGCGTCGTACTGCACCGGACAGTCGATCAATGTCACCGGCGGTCAGGTGATGTTCt < 2:322848/250‑1 (MQ=255) tggTGCATTCACTGATGCTCGGTAACCAACTTAAATCGCCGATGTTCCAGTCACTGCTGCCACAATACGCGACCAAGCTAGGTATCAAACCGGATCAAGTCGAGCAGTATTACATCGAC‑AAGTCCCGCTCAAACGCGGCTGCGATTATCAAGATGTG‑CTGAATATGCTGCTGTTCTACGCCAGTCCTAAGGCGTCGTAATGCACCGGACAGTCGATCAATGTCACAGGCGGTCAGGTGATGTTCTGATCa < 2:904847/249‑1 (MQ=255) tGCATTCACTGATGCTCGGTAACCTGCTGAAATCGCCGATGTTCCAGTCACTGTTGCCACAATACGCGACCAAGCTGGGTATCAAACCGGATCAAGTCGAGCAGTATTACATCGACAAAGTACCGCTCAAACGCGGCTGCGATTATCAAGATGTG‑CTGAATATGCTGCTGTTCTACGCCAGTCCTAAGGCGTCGTACTGCACCGGACAGTCGATCAATGTCACCGGCGGTCCGGGGGTGTTTTGATCaa > 2:617477/1‑249 (MQ=255) ctctGTGACCTACTGAAAACGCCGAAGTTCCAGTCACTGTTGCCACAATACGCGAACAAGCTGGGTAACAAACCGGATCAAGTCGAGCAGTATTACATCGACAAAGTACCGCTCAAACGCGGCTGCGATTATCAAGATGTG‑CTGAATATGCTGCTGTTCTACGCCAGTCCTAAGGCGGCGTACTGCACCGGACAGTCGATCAATGTCACCGGCGGTCAGGTGATGTTCTGATCAACAGCGGAGATCCAt < 2:119447/249‑1 (MQ=255) aCCTGCTGAAATCGCCGATGTTCCAGTCACTGTTGCCACAATACGCGACCAAGCTGGGTATCAAACCGGATCAAGTCGAGCAGTATTACATCGACAAAGTACCGCTCAAACGCGGCTGCGATTATCAAGATGTG‑CTGAATATGCTGCTGTTCTACGCCAGTCCTAAGGCGTCGTACTGCACCGGACAGTCGATCAATGTCACCGGCGGTCAGGTGATGTTCTGATCAACAGCGGAGATCCATTAAGGAt < 2:239886/249‑1 (MQ=255) aCCTGCTGAAATCGCCGATGTTCCAGTCACTGTTGCCACAATACGCGACCAAGCTGGGTATCAAACCGGATCAAGTCGAGCAGTATTACATCGACAAAGTACCGCTCAAACGCGGCTGCGATTATCAAGATGTG‑CTGAATATGCTGCTGTTCTACGCCAGTCCTAAGGCGTCGTACTGCACCGGACAGTCGATCAATGTCACCGGCGGTCAGGGGATGTTCTGATCAACAGCGGAGATCCATTAAGGAtc > 1:381128/1‑250 (MQ=255) cGCCGATGTTCCAGTCACTGTTGCCACAATACGCGACCAAGCTGGGTATCAAACCGGATCAAGTCGAGCAGTATTACATCGACAAAGTACCGCTCAAACGCGGCTGCGATTATCAAGATGTG‑CTGAATATGCTGCTGTTCTACGCCAGTCCTAAGGCGTCGTACTGCACCGGACAGTCGATCAATGTCACCGGCGGTCAGGTGATGTTCTGATCAACAGCGGAGATCCATTAAGGATCTCCGTGAGACta > 1:330793/1‑250 (MQ=255) gCCGATGTTCCAGTCACTGTTGCCACAATACGCGACCAAGCTGGGTATCAAACCGGATCAAGTCGAGCAGTATTACATCGACAAAGTACCGCTCAAACGCGGCTGCGATTATCAAGATGTG‑CTGAATATGCTGCTGTTCTACGCCAGTCCTAAGGCGTCGTACTGCACCGGACAGTCGATCAATGTCACCGGCGGTCAGGGGATGTTCTGATCAACAGCGGAGAGCCATTAAGGATCTCCGTGTGACta > 1:385979/1‑249 (MQ=255) ttCCAGTCACTGTTGCCACAATACGCGACCAAGCTGGGTATCAAACCGGATCAAGTCGAGCAGTATTACATCGACAAAGTACCGCTCAAACGCGGCTGCGATTATCAAGATGTG‑CTGAATATGCTGCTGTTCTACGCCAGTCCTAAGGCGTCGTACTGCACCGGACAGTCGATCAATGTCACCGGCGGTCAGGTGATGTTCTGATCAACAGCGGAGATCCATTAAGGATCTCCGTGAGACTATAGAATg < 1:681514/249‑1 (MQ=255) tCCAGTCACTGTTGCCACAATACGCGACCAAGCTGGGTATCAAACCGGATCAAGTCGAGCAGTATTACATCGACAAAGTACCGCTCAAACGCGGCTGCGATTATCAAGATGTG‑CTGAATATGCTGCTGTTCTACGCCAGTCCTAAGGCGTCGTACTGCACCGGACAGTCGATCAATGTCACCGGCGGTCAGGGGGTGTTCTGATCAAAAGCGGGGAACCATTCAGGATCTCCGTGAGAcataagaaagcc > 2:543421/1‑239 (MQ=255) tCCAGTCACTGTTGCCACAATACGCGACCAAGCTGGGTATCAAACCGGATCAAGTCGAGCAGTATTACATCGACAAAGTACCGCTCAAACGCGGCTGCGATTATCAAGATGTG‑CTGAATATGCTGCTGTTCTACGCCAGTCCTAAGGCGTCGTACTGCACCGGACAGTCGATCAATGTCACCGGCGGTCAGGGGATGTTCTGATCAACAGCGGAGATCCATTAAGGATCTCCGTGAGACTATAGAATGcc > 1:484457/1‑250 (MQ=255) aGTCACTGTTGCCACAATACGCGACCAAGCTGGGTATCAAACCGGATCAAGTCGAGCAGTATTACATCGACAAAGTACCGCTCAAACGCGGCTGCGATTATCAAGATGTG‑CTGAATATGCTGCTGTTCTACGCCAGTCCTAAGGCGTCGTACTGCACCGGACAGTCGATCAATGTCACCGGCGGTCAGGTGATGTTCTGGTc > 2:716722/1‑202 (MQ=255) gTCACTGTTGCCACAATACGCGACCAAGCTGGGTATCAAACCGGATCAAGTCGAGCAGTATTACATCGACAAAGTACCGCTCAAACGCGGCTGCGATTATCAAGATGTG‑CTGAATATGCTGCTGTTCTACGCCAGTCCTAAGGCGTCGTACTGCACCGGACAGTCGATCAATGTCACCGGCGGTCAGGTGATGTTCTGATCa < 1:716722/202‑1 (MQ=255) aCTGTTGCCACAATACGCGACCAAGCTGGGTATCAAACCGGATCAAGTCGAGCAGTATTACATCGACAAAGTACCGCTCAAACGCGGCTGCGATTATCAAGATGTG‑CTGAATATGCTGCTGTTCTACGCCAGTCCTAAGGCGTCGTACTGCACCGGACAGTCGATCAATGTCACCGGCGGTCAGGTGATGTTCTGATCAACAGCGGAGATCCATTAAGGATCTCCGTGAGACTATAGAATGCCTGATgc < 2:567133/249‑1 (MQ=255) cTGTTGCCACAATACGCGACCAAGCTGGGTATCAAACCGGATCAAGTCGAGCAGTATTACATCGACAAAGTACCGCTCAAACGCGGCTGCGATTATCAAGATGTG‑CTGAATATGCTGCTGTTCTACGCCAGTCCTAAGGCGTCGTACTGCACCGGACAGTCGATCAATGTCACCGGCGGTCAGGTGATGTTCTGATCAACAGCGGAGATCCATTAAGGATCTCCGTGAGACTATAGAATGCCTGATgcgc < 2:80227/250‑1 (MQ=255) gCCACAATACGCGACCAAGCTGGGTATCAAACCGGATCAAGTCGAGCAGTATTACATCGACAAAGTACCGCTCAAACGCGGCTGCGATTATCAAGATGTG‑CTGAATATGCTGCTGTTCTACGCCAGTCCTAAGGCGTCGTACTGCACCGGACAGTCGATCAATGTCACCGGCGGTCAGGTGATGTTCTGATCAACAGCGGAGATCCATTAAGGATCTCCGTGAGACTATAGAATGCCTGATGCGCTACg < 1:477525/249‑1 (MQ=255) gCCACAATACGCGACCAAGCTGGGTATCAAACCGGATCAAGTCGAGCAGTATTACATCGACAAAGTACCGCTCAAACGCGGCTGCGATTATCAAGATGTG‑CTGAATATGCTGCTGTTCTACGCCAGTCCTAAGGCGTCGTACTGCACCGGACAGTCGATCAATGTCACCGGCGGTCAGGTGATGTTCTGATCAACAGCGGAGATCCATTAAGGATCTCCGTGAGACTATAGAATGCCTGATGCGCTACg < 1:318911/249‑1 (MQ=255) ccACAATACGCGACCAAGCTGGGTATCAAACCGGATCAAGTCGAGCAGTATTACATCGACAAAGTACCGCTCAAACGCGGCTGCGATTATCAAGATGTG‑CTGAATATGCTGCTGTTCTACGCCAGTCCTAAGGCGTCGTACTGCACCGGACAGTCGATCAATGTCACCGGCGGTCAGGGGGTGTTCTGATCAACAGCCGAGGACCATTAAGGATCCCCGTGGGGCTATAGAATGCCTGAAGCGCTGCgac > 2:622270/1‑248 (MQ=255) acaATACGCGACCAAGCTGGGTATCAAACCGGATCAAGTCGAGCAGTATTACATCGACAAAGTACCGCTCAAACGCGGCTGCGATTATCAAGATGTG‑CTGAATATGCTGCTGTTCTACGCCAGTCCTAAGGCGTCGTACTGCACCGGACAGTCGATCAATGTCACCGGCGGTCAGGGGATGTTCTGATCAACAGCGGAGATCCATTAAGGATCTCCGTGAGACTATAGAATGCCTGATGCGCTACGCtca > 1:427545/1‑250 (MQ=255) cgACCAAGCTGGGTATCAAACCGGATCAAGTCGAGCAGTATTACATCGACAAAGTACCGCTCAAACGCGGCTGCGATTATCAAGATGTG‑CTGAATATGCTGCTGTTCTACGCCAGTCCTAAGGCGTCGTACTGCACCGGACAGTCGATCAATGTCACCGGCGGTCAGGGGATGTTCTGATCAACAGCGGAGATCCATTAAGGATCTCCGTGAGACTATAGAATGCCTGATGCGCTACGCTCATCAGGCa > 1:75283/1‑249 (MQ=255) gTATCAAACCGGATCAAGTCGAGCAGTATTACATCGACAAAGTACCGCTCAAACGCGGCTGCGATTATCAAGATGTG‑CTGAATATGCTGCTGTTCTACGCCAGTCCTAAGGCGTCGTACTGCACCGGACAGTCGATCAATGTCACCGGCGGTCAGGTGATGTTCTGATCAACAGCGGAGATCCATTAAGGATCTCCGTGAGACTATAGAATGCCTGATGCGCTACGCTCATCAGGCATACAGGACTTCCg < 1:892928/250‑1 (MQ=255) gTATCAAACCGGATCAAGTCGAGCAGTATTACAACGACAAAGTACCGCTCAAACGCGGCTGCGATTATCAAGATGTG‑CTGAATATGCTGCTGTTCTACGCCAGTCCTAAGGCGTCGTACTGCACCGGACAGTCGATCAATGTCACCGGCGGTCAGGTGATGTTCTGATCAACAGCGGAGATCCATTAAGGATCTCCGTGAGACTATAGAATGCCTGATGCGCTACGCTCATCAGGCATACAGGACTTCCg < 2:969058/250‑1 (MQ=255) tCAAACCTGATCAAGTCGAGCAGTATTACATCGACAAAGTACCGCTCAAACGCGGCTTCGATTATCAAGATGTG‑CTGAATATGCTGCTGTTCTACGCCAGTCCTAAGGCGTCGTACTGCACCGGACAGTCGATCAATGTCACCGGCGGTCAGGTGATGTTCTGATCAACAGCTGAGATCCATTAAGGATCTCCGTGAGACTATAGAATGCCTGATGCGCTACGCTCATCAGGCATACAGGACTTCCGcc < 2:505420/249‑1 (MQ=255) cAAACCGGATCAAGTCGAGCAGTATTACATCGACAAAGTACCGCTCAAACGCGGCTGCGATTATCAAGATGTG‑CTGAATATGCTGCTGTTCTACGCCAGTCCTAAGGCGTCGTACTGCACCGGACAGTCGATCAATGTCACCGGCGGTCAGGTGATGTTCTGATCAACAGCGGAGATCCATTAAGGATCTCCGTGAGACTATAGAATGCCTGATGCGCTACGCTCATCAGGCATACAGGACTTCCGCCAc < 1:693375/250‑1 (MQ=255) aaCCGGTACAAGTCGAGAATAATTCAATCAACAAATTACCGCTCAACGGCGGCTGGGATTAACAAGATGTG‑CTAAATATTCTGCTGTTCTACGCCATTCATAAGGCGTCGTACTGCACCGGACAGTCAATCAATGTCACCGGCGGTCAGGTGATGTTCTGATCAACAGCGGAGATCCATTAAGGATCTCCGTGAGACTATAGAATGCCTGATGCGCTACGCTCATCAGGCATACAGGTCTTCCGCCACTa < 2:41809/250‑1 (MQ=255) ccGGATCAAGTCGAGCAGTATTACATCGACAAAGTACCGCTCAACCGCGGCTGCGATTATCAAGATGTG‑CTGAATATGCTGCTGTTCTACGCCAGTCCTAAGGCGTCGTACTGCACCGGACAGTCGATCAATGTCACCGGCGGTCAGGTGATGTTCTGATCAACAGCGGAGATCCATTAAGGATCGCCGTGAGACTATAGAATGCCTGATGCGCTACGCTCATCAGGCATACAGGACTTCCGCCACTACa < 1:806591/250‑1 (MQ=255) aTCAAGTCGAGCAGTATTACATCGACAAAGTACCGCTCAAACGCGGCTGCGATTATCAAGATGTG‑CTGAATATGCTGCTGTTCTACGCCAGTCCTAAGGCGTCGTACTGCACCGGACAGTCGATCAATGTCACCGGCGGTCAGGGGATGTTCTGATCAACAGCGGCGATCCATTAAGGATCTCCGTGAGACTATAGAATGCCTGATGCGCTACGCTCCTCAGGCCTACAGGACTTCCGCCACTACAtt > 1:155125/1‑248 (MQ=255) aGTCGAGCAGTATTACATCGACAAAGTACCGCTCAAACGCGGCTGCGATTATCAAGATGTG‑CTGAATATGCTGCTGTTCTACGCCAGTCCTAAGGCGTCGTACTGCACCGGACAGTCGATCAATGTCACCGGCGGTCAGGGGATGTTCTGATCAACAGCGGAGATCCATTAAGGATCTCCGTGAGACTATAGAATGCCTGATGCGCTACGCTCCTCAGGCATACAGGACTTCCGCCACTACATTAAGGa > 1:964289/1‑249 (MQ=255) gAGCAGTATTACATCGACAAAGTACCGCTCAACCGCGGCTGCGATTATCAAGATGTG‑CTGAATATGCTGCTGTTCTACGCAAGTCCTAAGGCGTCGTACTGCACCGGACAGTCGATCAATGTCACCGGCGGTCAGGTGATGTTCTGATCAACAGCGGAGATCCATTAAGGATCTCCGTGAGACTATAGAATGCCTGATGCGCTACGCTCATCAGGCATACAGGACTTCCGCCACTACATTAAGGAAAAGt < 1:809176/250‑1 (MQ=255) gAGCAGTATTACATCGACAAAGTACCGCTCAAACGCGGCTGCGATTATCAAGATGTG‑CTGAATATGCTGCTGTTCTACGCCAGTCCTAAGGCGTCGTACTGCACCGGACAGTCGATCAATGTCACCGGCGGTCAGGGGATGTTCTGATCAACAGCGGGGATCCATTAAGGATCTCCGGGGGACTATAGAATGCCTGATGCGCCAACCCCATCAGGCATACAGGCCTTCCGCCACTCCATTAAGGGAAAGt > 2:286247/1‑250 (MQ=255) aGCAGTATTACATCGACAAAGTACCGCTCAAACGCGGCTGCGATTATCAAGATGTG‑CTGAATATGCTGCTGTTCTACGCCAGTCCTAAGGCGTCGTACTGCACCGGACAGTCGATCAATGTCACCGGCGGTCAGGGGATGTTCTGATCAACAGCGGAGATCCATTAAGGATCTCCGTGAGACTATAGAATGCCTTATGCGCTACCCTCATCAGGCATACAGGACTTCCGCCACTACATTAAAGacaaag > 2:817571/1‑247 (MQ=255) tATTACATCGACAAAGTACCGCTCAAACGCGGCTGCGATTATCAAGATGTG‑CTGAATATGCTGCTGTTCTACGCCAGTCCTAAGGCGTCGTACTGCACCGGACAGTCGATCAATGTCACCGGCGGTCAGGGGATGTTCTGCTCCACAGCGGGGATCCCTTTAAGGTCTCCGTGGGACTCTAGAATGCCTGATGTGCTACCCTCATCAGGGATACACGACTTCCGCCACTACATTTAGGACAAGGTTTgg > 2:784839/1‑249 (MQ=255) ttACATCGACAAAGTACCGCTCAAACGCGGCTGCGATTATCAAGATGTG‑CTGAATATGCTGCTGTTCTACGCCAGTCCTAAGGCGTCGTACTGCACCGGACATTCGATCAATGTCGCCGGCGGTCGGGTGATGTTCTGATCAACAGCGGAGATCCATTAAGGATCTCCGTGAGACTATAGAATGCCTGATGCGCTACGCCCATCAGGCATACAGGACTTCCGCCACTACATTAAGGAAAAGTTATGGTAt < 1:508468/250‑1 (MQ=255) ccATCGACAAAGTACCGCTCAACCGCGTCTCCGGTTTTCATGATGGG‑CTAAATTGGCGGCTGTTCTCCCCCCGCCTTAAGCCGTCGTACTGCCCCGTACAGTCGATCAATGTCCCCGGCCGTCAGGTAATCTTCTGATCAACAGCGGAAATCCTTTAAGGATCTCCGTAAGCCTATAGAATGCCTGATGCGCTACGCTCATCCGGCATACAGCCCTTCCGCCACTACATTAAGGAAAATTTATGGTATcc < 2:965731/249‑1 (MQ=255) agcGACAAAGTACCGCTCAAACGCGGCTGCGATTATCAAGATGTG‑CTGAATATGCTGCTGTTCTACGCCAGTCCTAAGGCGTCGTACTGCACCGGACAGTCGATCAATGTCACCGGCGGTCAGGTGATGTTCTGATCAACAGCGGAGATCCATTAAGGATCTCCGTGAGACTATAGAATGCCTGATGCGCTACGCTCATCAGGCATACAGGACTTCCGCCACTACATTAAGGAAAAGTTATGGTATCCGc < 1:454766/248‑1 (MQ=255) gACAAAGTACCGCTCAAACGCGGCTGCGATTATCAAGATGTG‑CTGAATATGCTGCTGTTCTACGCCAGTCCTAAGGCGTCGTACTGCACCGGACAGTCGATCAATGTCACCGGCGGTCAGGTGATGTTCTGATCAACAGCGGAGATCCATTAAGGATCTCCGTGAGACTATAGAATGCCTGATGCGCTACGCTCATCAGGCATACAGGACTTCCGCCACTACATTAAGGAAAAGTTATGGTATCCGCACt < 1:20522/250‑1 (MQ=255) agaaaGTCCCGCTCAAACGCGGCGGCGATTATAAAGATGTG‑CTGAATATGCTGCTGTTCTACGCCAGTCCAAGGGCGTCGTACTGCACCGGACAGTCGATCAATGTCACCGGCGGTCAGGTGATGTTCTGATCAACGGCGGAGATCCATTAAGGATCTCCGTGAGACTATAGAATGCCTGATGCGCTACGCTCATCAGGCATACAGGACTTCCGCCACTACATTAAGGAAAAGTTATGGTATCCGCACtc < 2:427545/248‑1 (MQ=255) aaaGTACCGCTCAAACGCGGCTGCGATTATCAAGATGTG‑CTGAATATGCTGCTGTTCTCCGCCAGTCCTAAGGCGTCGTGCTGCACCGGACAGTCGATCAATGTCACCGGCGGTCAGGTGATGTTCTGATCAACAGCGGAGATCCATTAAGGATCTCCGTGAGACTATAGAATGCCTGATGCGCTACGCTCATCAGGCATACAGGACTTCCGCCACTACATTAAGGAAAAGTTATGGTATCCGCACtcat < 1:856585/250‑1 (MQ=255) aaaGTACCGCTCAAACGCGGCTGCGATTATCAAGATGTG‑CTGAATATGCTGCTGTTCTACGCCAGTCCTAAGGCGTCGTACTGCACCGGACAGTCGATCAATGTCACCGGCGGTCAGGGGATGTTCTGATCAAAAGCGGAGATCCATTAAGGATCTCCGTGAGACTATAGAAAGCCCGATGCGCTACGCTCCTCAGGCATACAGGGCTTCCGCCCCTACATTAAGGGAAAGTTATGGTATCCGCACtcat > 2:885028/1‑250 (MQ=255) aaGTACCGCTCAAACGCGGCTGCGATTATCAAGATGTG‑CTGAATATGCTGCTGTTCTACGCCAGTCCTAAGGCGTCGTACTGCACCGGACAGTCGATCAATGTCACCGGCGGTCAGGTGATGTTCTGATCAACAGCGGAGATCCATTAAGGATCTCCGTGAGACTATAGAAAGCCTGATGCGCTACGCTCATCAGGCATACAGGACTTACGCCACTACATTTAGGGAAAGTTATGGTATCCGCACtcatc > 2:29213/1‑250 (MQ=255) ccGCTCAAACGCGGCTGCGATTATCAAGATGTG‑CTGAATATGCTGCTGTTCTACGCCAGTCCTAAGGCGTCGTACTGCACCGGACAGTCGATCAATGTCACCGGCGGTCAGGTGATGTTCTGATCAACAGCGGAGATCCATTAAGGATCTCCGTGAGACTATAGAATGCCTGATGCGCTACGCTCATCAGGCATACAGGACTTCCGCCACTACATTAAGGAAAAGTTATGGTATCCGCACTCATCACCGt > 1:631692/1‑250 (MQ=255) cGCTCAACCGCGTCTGCTATTATCAAGTGTTT‑CGGAAGATGCTGCTGTTCTACGCCAGTCCTAAGGCGTCGTACTGCACCGAACAGTCGATAAATGTCCCCGGCGGTCAGGTGATGTTCTGATCAACAGCGGAGACCCATTAAGGATCTCGGTGAGACTATAGAATGCCTGATGCGCTACGCTCATCAGGCATACAGGACTTCCGCCACTACATTAAGGAAAAGTTATGGTATCCGCACTCATCACCGTc < 2:760777/250‑1 (MQ=255) gCTCAAACGCGGCTGCGATTATCCAGATGTG‑CTGAATATGCTGCTGTTCTACGCCAGTCCTAAGGCGTCGTACTGCCCCGGACAGTCGATCAATGTCGCCGGCGGTCAGGTGATGTTCTGATCAACAGCGGGGATCCATTAAGGATCTCCGTGAGACTATAGAATGCCTGATGCGCTACGCTCTTCAGGCATACAGGACTTCCGCCACTACATTAAGGAAAAGTTATGGTATCCGCACTCATCACCGTCg < 2:904035/250‑1 (MQ=255) gCTCAAACGCGGCTGCGATTATCAAGATGTG‑CTGAATATGCTGCTGTTCTACGCCAGTCCTAAGGCGTCGTACTGCACCGGACAGTCGATCAATGTCACCGGCGGTCAGGTGATGTTCTGATCAACAGCGGAGATCCCTTAAGGATCTCCGTGAGACTATAGAATGCCTGATGCGCTACGCTCATCAGGCATACAGGACTTCCGCCCCTACATTAAGGAAAAGTTATGGTATCCGCACTCATCACCGTCg > 1:202732/1‑250 (MQ=255) tCAAACGCGGCTGCGATTATCAAGATGTG‑CTGAATATGCTGCTGTTCTACGCCAGTCCTAAGGCGTCGTACTGCACCGGACAGTCGATCAATGTCACCGGCGGTCAGGGGATGTTCTGATCAACAGCGGAGATCCATTAAGGGTCTCCGTGAGACTATAAAATGCCTGATGCGCTACGCTCATCAGGCATACAGGACTTCCGCCACTACATTAAGGAAAAGTTATGGTATCCGCACTCATCACCGTCGcc > 2:951856/1‑250 (MQ=255) aaaCGCGGCTGCGATTATCAAGATGTG‑CTGAATATGCTGCTGTTCTACGCCAGTCCTAAGGCGTCGTACTGCACCGGACAGTCGATCAATGTCACCGGCGGTCAGGTGATGTTCTGATCAACAGCGGAGATCCATTAAGGATCTCCGTGAGACTATAGAATGCCTGATGCGCTACGCTCATCAGGCATACAGGACTTCCGCCACTACATTAAGGAAAAGTTATGGTATCCGCACTCATCACCGTCGCCGt > 1:860937/1‑250 (MQ=255) ccggggcggggATTATGAAGA‑GTGCCTGAATGTGCTGTTGTTCGACGCCAGTCCAAAGGCGTCGTACTGCCCCGGACAGTCGATCAATGTCGCCGGCGGTCAGGTGATGTTCTGATCAACAGGGGAGATCCATTAAGGATCTCCGTGAGACTATAGAATGCCTGATGGGCTGCGCTCATCGGGCATACAGGGCTTCCGCCACTACATTAAGGAAAAGTTATGGTATCCGCACTCATCACCGTCGCCGTTa < 2:498260/240‑1 (MQ=255) cgcgGCTGCGATTATCAAGATGTG‑CTGAATATGCTGCTGTTCTACGCCAGTCCTAAGGCGTCGTACTGCACCGGACAGTCGATCAATGTCACCGGCGGTCAGGGGATGTTCTGATCAACAGCGGAGATCCATTAAGGATCTCCGGGAGACTATAGAATTCCTGATGCGCTACGCTCATCAGGCATACAGGACTTCCCCCACTACATTTAGGAAAAGATATGGGATCCGCACTCACCACCCTcccccgtat > 2:202679/1‑245 (MQ=255) gctacttgtaTTATAAGGATGTG‑CTGAACGTGCTGCTGTTCTACGCCAGTTCAAAGGCCTGGTCCTGCACCGGACGGTCGATGAATGGCCCCGGCGGTCAGGTATTGTTTTGATCAACAGCGGAGGTCCATAAAGGATCACGGTGAGTCTATAAAAGCCTTGGTGCGCTGCGCTCTGCAGGCATACAGGATTGCCGCCACTACATTAAGGAAAAGTTATGGTATCCGCACTCATCACCGTCGCCGTTATc < 2:856505/241‑1 (MQ=255) cTGCGATTATCAAGATGTG‑CTGAATATGCTGCTGTTCTACGCCAGTCCTAAGGCGTCGTACTGCACCGGACAGTCGATCAATGTCACCGGCGGTCAGGTGATGTTCTGATCAACAGCGGAGATCCATTAAGGATCTCCGTGAGACTATAGAATGCCCGATGCGCTCCGCTCCACAGGCATAACGGAATTTCGCCACTAAACTAAGGAAAAGTTATGGTATCCGCACTCATCACCGTCGCCGTTATCGCCt > 2:766554/1‑250 (MQ=255) tGCGATTATCAAGATGTG‑CTGAATATGCTGCTGTTCTACGCCAGTCCTAAGGCGTCGTACTGCACCGGACAGTCGATCAATGTCACCGGCGGTCAGGGGATGTTTTTATCCACAGCGGAGATCCATTAAAGGTCTCCGTGAGACTATAAAATGCCTGATGCGCTACGCGCATCAGGCATACAGGACTTTCGCCCCTAAATTAAGGGAAAGTTATGGTATCCGCACTCATCCCCCGCGCCCGTATCGccct > 2:520797/1‑248 (MQ=255) ttATCAAGATGTG‑CTGAATATGCTGCTGTTCTACGCCAGTCCTAAGGCGTCGTACTGCACCGGACAGTCGATCAATGTCACCGGCGGTCAGGGGATGTTCTGATCAACAGCGGAGATCCATTAAGGATCTCCGTGAGACTATAGAATGCCTGATGCGCTACGCTCATCAGGCATACAAGACTTCCGCCACTACATTAAGGAAAAGTTATGGTATCCGCACTCATCACCGTCGCCGTTTTCGCCTTGggtg > 1:397092/1‑250 (MQ=255) aTCAAGATGTG‑CTGAATATGCTGCTGTTCTACGCCAGTCCTAAGGCGTCGTACTGCACCGGACAGTCGATCAATGTCACCGGCGGTCAGGGGATGTTCTGATCAAAAGCGGAGATCCATTAAGGATCTCCGTGAGACTATAGAATGCCTGATGCGCTACGCCCATCAGGCATACAGGACTTCCGCCACTACCTTAAGGAAAAGTTATGGGATCCGCACTCATCACCGTCGCCGTTCTCCCCTGGTGTgcg > 2:284095/1‑250 (MQ=255) tCAAGATGTG‑CTGAATATGCTGCTGTTCTACGCCAGTCCTAAGGCGTCGTACTGCACCGGACAGTCGATCAATGTCACCGGCGGTCAGGTGATGTTCTGATCAACAGCGGAGATCCATTAAGGATCTCCGTGAGACTATAGAATGCCTGATGCGCTACGCTCATCAGGCATACAGGACTTCCGCCACTACATTAAGGAAAAGTTATGGTATCCGCACTCATCACCGTCGCCGTTATCGCCTGGTGTgcgc < 1:262629/250‑1 (MQ=255) aTGTG‑CTGAATATGCTGCTGTTCTACGCCAGTCCTAAGGCGTCGTACTGCACCGGACAGTCGATCAATGTCACCGGCGGTCAGGTGGTGTTCTGATCAACAGCGGAGATCCATTAAGGATCTCCGTGGGACTATAGAATGCCTGATGCGCTACGCTCATCAGGCCTACAGGACTTCCGCCACCACCTTAAGGAAAAGTTATGGTATCCGCACTCCTCACCGTCCCCGTTATCGCCCGGTGTGCGGCACTg > 2:359996/1‑250 (MQ=255) tg‑CTGAATATGCTGCTGTTCTACGCCAGTCCTAAGGCGTCGTACTGCACCGGACAGTCGATCAATGTCACCGGCGGTCAGGTGATGTTCTGATCAACAGCGGAGATCCATTAAGGATCTCCGTGAGACTATAGAATGCCTGATGCGCTACGCTCATCAGGCATACAGGACTTCCGCCACTACATTAAGGAAAAGTTATGGTATCCGCACTCATCACCGTCGCCGTTATCGCCTGGTGTGCGCAACTGGcc < 1:842122/250‑1 (MQ=255) gcggAATATGCGGCTTTTTTACGCCAGCCCTAAGGCTCCGTACTGCCCCGACCATCCGATCAATGTCCCCGGCGGTCAGGTGATGTTCTGACCAACAGCGGAGACCCATTAAGGATCTCCGTGAGCCTAAAAAATGCCTGATGCGCTCCGCTCATCAGCCATACAGGCTTTCCGCCACTACATTAAGGAAAAGTTATGGTATCCGCACTCATCACCGTCGCCGTTATCGCCTGGTGTGCGCAACTGGCCt < 2:2670/247‑1 (MQ=255) gAATATGCTGCTGTTCTACGCCAGTCCTAAGGCGTCGTACTGCACCGGACAGTCGATCAATGTCACCGGCGGTCAGGGGATGTTCTGATCAACAGCGGAGATCCATTAAGGATCTCCGTGAGACTATAGAATGCCTGATGCGCTACGCTCATCAGGCATACAGGACTTCCGCCACTACATTAAGGAAAAGTTATGGTATCCGCACTCATCACCGTCGCCGTTATCGCCTGGTGTGCGCAACTGGCCTTAg > 1:318506/1‑250 (MQ=255) tatGCTGCTGTTCTACGCCAGTCCTAAGGCGTCGTACTGCACCGGACAGTCGATCAATGTCACCGGCGGTCAGGTGATGTTCTGATCAACAGCGGAGATCCATTAAGGATCTCCGTGAGACTATAGAATGCCTGATGCGCTACGCTCATCAGGCATACAGGACTTCCGCCACTACATTAAGGAAAAGTTATGGTATCCGCACTCATCACCGTCGCCGTTATCGCCTGGTGTGCGCAACTGGCCTTAggcg < 1:151191/250‑1 (MQ=255) atGCTGCTGTTCTACGCCAGTCCTAAGGCGTCGTACTGCACCGGACAGTCGATCAATGTCACCGGCGGTCAGGTGATGTTCTGATCAACAGCGGAGATCCATTAAGGAGCTCCGGGAGACTATAGAATGCCTGATGCGCTACGCTCATCAGGCATACAGGACTTCCGCCCCTACATTAAGGAAAAGTTATGGGATCCGCACTCATCCCCTTCGCCGTTATCGCCCGGGGTGCGCAAATGGCCTTAtgcgg > 2:169959/1‑250 (MQ=255) gctgctGTTCTACGCCAGTCCTAAGGCGTCGTACTGCACCGGACAGTCGATCAATGTCACCGGCGGTCAGGTGATGTTCTGATCAACAGCGGAGATCCATTAAGGATCTCCGTGAGACTATAGAATGCCTGATGCGCTACGCTCATCAGGCATACAGGACTTCCGCCACTACATTAAGGAAAAGTTATGGGATCCGCACTCATCACCGTCGCCGTTATCGCCTGGTGTGCGCAACTGGCCTTAGGCGGCt > 1:88582/1‑250 (MQ=255) tCTACGCCAGTCCTAAGGCGTCGTACTGCACCGGACAGTCGATCAATGTCACCGGCGGTCAGGGGATGTTCTGATCCACAGCGGAGATCCCTTAAGGATCTCCGTGAGACTATAGAATGCCTGATGCGCTACGCTCATCCGGCATACAGGACTTCCGCCACTACATTAAGGGAAAGGTATGGTATCCGCACTCATCACCCTCGCCGTTATCGCCCGGTGTGCGCCACTGGCCTTAGGCGGCTGGcccatt > 2:801332/1‑245 (MQ=255) cTACGCCAGTCCTAAGGCGTCGTACTGCACCGGACAGTCGATCAATGTCACCGGCGGTCAGGGGATGTTCTGATCAACAGCGGAGATCCATTAAGGATCTCCGTGAGACTATAGAATGCCTGATGCGCTACGCTCATCAGGCATACAGGACTTCCGCCACTACATTAAGGAAAAGTTATGGTATCCGCACTCATCACCGTCGCCGTTATCGCCTGGTGTGCGCAACTGGCCTTAGGCGGCTGGCAAAttt > 1:767464/1‑250 (MQ=255) cTACGCCAGTCCTAAGGCGTCGTACTGCACCGGACAGTCGATCAATGTCACCGGCGGTCAGGGGATGTTCTGATCAACAGCGGAGATCCATTAAGGATCTCCGTGAGACTATAGAATGCCTGATGCGCTACGCCCATCAGGCATACAGGACTTCCGCCACTACATTAAGGAAAAGGTATGGTATCCGCACTCATCACCGTCGCCGTTATCGCCTGGTGTGCGCAACTGGCCTTAGGCGGCTGGCAAAttt > 2:213814/1‑250 (MQ=255) gCCAGTCCTAAGGCGTCGTACTGCACCGGACAGTCGATCAATGTCACCGGCGGTCAGGTGATGTTCTGATCAACAGCGGAGATCCATTAAGGATCTCCGTGAGACTATAGAATGCCTGATGCGCTACGCTCATCAGGCATACAGGACTTCCGCCACTACATTAAGGAAAAGTTATGGTATCCGCACTCATCACCGTCGCCGTTATCGCCTGGTGTGCGCAACTGGCCTTAGGCGGCTGGCAAATTTCTCg < 1:170960/250‑1 (MQ=255) aaGGCGTCGTACTGCACCGGACAGTCGATCAATGTCACCGGCGGTCAGGGGATGTTCTGATCAACAGCGGAGATCCATTAAGGATCTCCGTGAGACTATAGAATGCCTGATGCGCTACGCCCATCCGGCATACAGGACTTCCGCCACTACATTAAGGAAAAGTTATGGGATCCGCACCCATCACCGTCCCCGCTTTCGCCTGGTGTGCGCAACTGGCCCTCGGCGGCTGGCAAATTTCTCGGTTTTACCg > 2:434387/1‑250 (MQ=255) ggCGTCTTACTCCCCCGGACAGGCGATAAATGGCCCCGGCGGTCAGGTGATGTTCTGACCAACAGGGGAGTTCCATTAAGGATCTCCGTGAGACTATAAAAGGCCTGATGCGCTACGCTCATCGGGCATACAGGACTTCCGCCACTACATTAAGGAAAAGTTATGGTATCCGCACTCATCACCGTCGCCGTTATCGCCTGGTGTGCGCAACTGGCCTTAGGCGGCTGGCAAATTTCTCGTTTTAACCGTg < 2:412801/250‑1 (MQ=255) tcgtACTGCACCGGACAGTCGATCAGTGTCACCGGCGGTCAGGTGATGTTCTGATCAACAGCGGAGATCCATTAAGGATCTCCGTGAGACTATAGAATGCCCGATGCGCTACGCCCATCAGGCATACAGGACTTCCCCCACCACATTAAGGAAAAGTTATGGTATCCGCACTCATCACCCTCGCCCGTATCGCCTGGTGTGCGCAACTGGCCTTCGGCGGCCGGCAAATTTCTCGTTTTAATCCTGCCtg > 2:389603/1‑249 (MQ=255) gtACGGCACCGAACAGTGGAGCATTGTCGCCGGCGTTCAGTGGATGATCTAATAAACAGCGGAGATCCATTAGGGATCTCGGTGAGACTAATGAATGCCTGATGCGCTACGCTCATCAGTCATACAGGACTTCCGCCACTACATTAAGGAAAAGTTATGGTATCCGCACTCAGCACCGTCGCCGTTATCGCCTGGTGTGCGCAACTGGCCTTAGGCGGCTGGCAAATTTCTCGTTTTAACCGTGCCtt < 2:701801/248‑1 (MQ=255) cTGCACCGGACAGTCGATCAATGTCACCGGCGGTCAGGGGACGTTCTGATCAACAGCGGAGATCCATTAAGGATCTCCGTGAGACTATAGAATGCCTGATGCGCTACGCCCATCAGGCATACAGGACTTCCGCCACTACATTAAGGAAAAGTTATGGTATCCCCACTCATCACCGTCGCCCTTATCGCCTGGTGTGCGCAACTGGCCTTAGGCGGCTGGCCAATTTCTCGTTTTAACCGTGCCTTCGacc > 1:906749/1‑249 (MQ=255) ccGGACAGTCGATCAATGTCACCGGCGGTCAGGGGATGTTCTGATCAACAGCGGAGATCCATTAAGGATCTCCGTGAGACTATAGAATGCCTGATGCGCTACGCTCATCAGGCATACAGGACTTCCGCCACTACATTAAGGAAAAGTTATGGTATCCGCACTCATCACCGTCGCCGTTATCGCCTGGTGTGCGCAACTGGCCTTAGGCGGCTGGCAAATTTCTCGTTTTAACCGTGCCTTCGACACACTa > 1:742202/1‑250 (MQ=255) cGGACAGTCGATCAATGTCACCGGCGGTCAGGGGATGTTCTGATCAACAGCGGAGATCCATTAAGGATCTCCGTGAGACTATAGAATGCCTGATGCGCTACGCTCATCAGGCATACAGGACTTCCGCCACTACATTAAGGAAAAGTTATGGTATCCGCACTCATCACCGTCGCCGTTATCGCCTGGTGTGCGCCACTGGCCTTAGGCGGCTGGCAAATTTTTCGTTTTAACCGTGCCTTCGacacacctt > 1:518273/1‑247 (MQ=255) gggcAGACGAGCAATGTCACCGGCGGTAAGGTGAGGTTCGAATCAACAGCGGAGAACCATTAAGAATCTCCGTGAGACAATAAAATGCCTGAGGCGCTACGCTCATCAGGCATACAGGACTTCCGCCACTACATTAAGGAAAAGTTATGGTATCCGCACTCATCACCGTCGCCGTTATCGCCTGGTGTGCGCAACTGGCCTTAGGCGGCTGGCAAATTTCTCGTTTTAACCGTGCCTTCGACACACTATg < 1:431255/247‑1 (MQ=255) aCAGTCGATCAATGTCACCGGCGGTCAGGTGATGTTCTGATCAACAGCGGGGATCCATTAAGGATCTCCGTGAGACTATAGAATGCCTGATGCGCTACGCTCATCAGGCATACAGGACTTCCGCCCCTACATTAAGGAAAAGTTATGGTATCCGCACTCATCACCGCCGCCGTTATCGCCTGGGGTGCGCAAATGGCCTTAGGCGGCTGGCCAATTTCTCGTTTTTACCGTGGCTTCTGCACACTATGcc > 2:304117/1‑250 (MQ=255) cAGGCGATCAATGTCACCGGCGGTCAGGTGATGTTCTGATCAACAGCGGAGATCCATTAAGGGTCTCCGTGAGACTATAGAATGCCTGATGCGCTACGCTCATCAGGCATACAGGACTTCCGCCACTACATTAAGGAAAAGTTATGGTATCCGCACTCATCACCGTCGCCGTTATCGCCTGGTGTGCGCAACTGGCCTTAGGCGGCTGGCAAATTTCTCGTTTTAACCGTGCCTTCGACACACTATGCCa < 2:421211/250‑1 (MQ=255) aaTGTCACCGGCGGTCAGGTGATGTTCTGATCAACAGCGGAGATCCATTAAGGATCTCCGTGAGACTATAGAATGCCTGATGCGCTACGCTCATCAGGCATACAGGACTTCCGCCCCTACATTAAGGAAAAGTTATGGTATCCGCACTCATCACCGTCGCCGTTTTCCCCTGGGGTGCGCAACTGGCCTTAGGCGGCTGGCAAATTTTTCGTTTTAACCGTGCCTTCGACACCCTATGCCAGCAAGGGCg > 2:219238/1‑250 (MQ=255) cggcggTCAGGTGATGTTCTGATCAACAGCGGAGATCCATTAAGGATCTCCGTGAGACTATAGAATGCCTGATGCGCTACGCTCATCAGGCATACAGGACTTCCGCCACTACATTAAGGAAAAGTTATGGTATCCGCACTCATCACCGTCGCCGTTATCGCCTGGTGTGCGCAACTGGCCTTAGGCGGCTGGCAAATTTCTCGTTTTAACCGTGCCTTCGACACACTATGCCAGCAAGGGCGGGTTGGCg > 2:862015/1‑250 (MQ=255) gttGATGTTCTGATCAACAGCGGAGACCCATTAAGGATCTCCGTGAGACTATAGAATGCCTGATGCGCTACGCTCATCAGGCATACAGGACTTCCGCCACTACATTAAGGAAAAGTTATGGTATCCGCACTCATCACCGTCGCCGTTATCGCCTGGTGTGCGCAACTGGCCTTAGGCGGCTGGCAAATTTCTCGTTTTAACCGTGCCTTCGACACACTATGCCAGCAAGGGCGGGTTGGCGTGGGCCGtt < 1:709758/248‑1 (MQ=255) | TACGGCATTACGGTGCATTCACTGATGCTCGGTAACCTGCTGAAATCGCCGATGTTCCAGTCACTGTTGCCACAATACGCGACCAAGCTGGGTATCAAACCGGATCAAGTCGAGCAGTATTACATCGACAAAGTACCGCTCAAACGCGGCTGCGATTATCAAGATGTG‑CTGAATATGCTGCTGTTCTACGCCAGTCCTAAGGCGTCGTACTGCACCGGACAGTCGATCAATGTCACCGGCGGTCAGGTGATGTTCTGATCAACAGCGGAGATCCATTAAGGATCTCCGTGAGACTATAGAATGCCTGATGCGCTACGCTCATCAGGCATACAGGACTTCCGCCACTACATTAAGGAAAAGTTATGGTATCCGCACTCATCACCGTCGCCGTTATCGCCTGGTGTGCGCAACTGGCCTTAGGCGGCTGGCAAATTTCTCGTTTTAACCGTGCCTTCGACACACTATGCCAGCAAGGGCGGGTTGGCGTGGGCCGTT > NZ_CP009273/2821618‑2822112 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |