| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NZ_CP009273 | 4,036,390 | 0 | A | G | 49.1% | 45.5 / 18.9 | 53 | N206D (AAT→GAT) | srkA | stress response kinase SrkA |
| Reads supporting (aligned to +/- strand): ref base A (16/11); new base G (26/0); total (42/11) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 2.72e-04 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
| Rejected as consensus: Frequency below/above cutoff threshold. | |||||||||||
CGGTTGGGCGTTATTTAGGGCGTATGCACCAGACGGGGCGCAAACAGCTTTTTATCCATCGCCCGACCATCGGTTTGAACGAATATCTCATTGAGCCACGCAAGCTGTTTGAGGACGCTACACTGATACCTTCCGGGTTGAAAGCGGCATTCCTGAAAGCGACAGATGAGCTGATTGCCGCCGTTACAGCACACTGGCGGGAAGATTTCACCGTTCTGCGGCTACATGGAGACTGCCACGCCGGGAATATTCTCTGGCGCGATGGTCCAATGTTTGTTGATCTGGATGATGCACGTAATGGTCCAGCCGTTCAGGA‑TTTGTGGATGTTGCTCAATGGCGATAAAGCCGAGCAGCGGAT‑GCAACTGGAAACTATTATTGAAGCTTATGAAGAATTTAGCGAGTTCGACACCGCTGAAATCGGACTGATTGAACCTTTACGCGCCATGCGTTTGGTTTATTATCTTGCCTGGCTAATGCGGCGTTGGGCTGA > NZ_CP009273/4036145‑4036634 | cGGTTGGGCGTTATTTAGGGCGTATGCACCAGACGGGGCGCAAACAGCTTTTTATCCATCGCCCGACCATCGGTTTGAACGAATATCTCATTGAGCCACGCAAGCTGTTTGAGGACGCTACACTGATACCTTCCGGGTTGAAAGCGGCATTCCTGAAAGCGACAGATGAGCTGATTGCCGCCGTTACAGCACACTGGCGGGCAGATTTCACCGCTCTGCCGCTACCTGGAGGATGTCCCGCCGGGGatat > 1:54121/1‑250 (MQ=255)cGGTTGGGCGTTATTTAGGGCGTATGCACCAGACGGGGCGCAAACAGCTTTTTATCCATCGCCCGACCATCGGTTTGAACGAATATCTCATTGAGCCACGCAAGCTGTTTGAGGACGCTACACTGATACCTTCCGGGTTGAAAGCGGCATTCCTGAAAGCGACAGATGAGCTGATTGCCGCCGTTACAGCACACTGGCGGGAAGATTTCACCGTTCTGCGGCTACATGGGGACTGCCACGCCGGGGatat > 1:131785/1‑250 (MQ=255) cGTTATTTAGGGCGTATGCACCAGACGGGGCGCAAACAGCTTTTTATCCATCGCCCGACCATCGGTTTGAACGAATATCTCATTGAGCCACGCAAGCTGTTTGAGGACGCTACACTGATACCTTCCGGGTTGAAAGCGGCATTCCTGAAAGCGACAGATGAGCTGATTGCCGCCGTTACAGCACACTGGCGGGGAGAATTTTCCGTTCTTCGGGCTCCTGGAGAACGTCACCCCGGGAGAATTTTCTGgc > 2:270597/1‑250 (MQ=255) cGTTATTTAGGGCGTATGCACCAGACGGGGCGCAAACAGCTTTTTATCCATCGCCCGACCATCGGTTTGAACGAATATCTCATTGAGCCACGCAAGCTGTTTGAGGACGCTACACTGATACCTTCCGGGTTGAAAGCGGCATTCCTGAAAGCGACAGATGAGCTGATTGCCGCCGTTACAGCACACTGGCGGGAAGATTTCACCGTTCTGCGGCTACATTGAGACTGCCACGCCGGGGATCTTCTCTTgc > 2:270623/1‑250 (MQ=255) ttATTTAGGGCGTATGCACCAGACGGGGCGCAAACAGCTTTTTATCCATCGCCCGACCATCGGTTTGAACGAATATCACATTGAGCCACGCAAGCTGTTTGAGGACGCTACACTGATACCTTCCGGGTTGAAAGCGGCATTCCTGAAAGCGACAGATGAGCTGATTGCCGCCGTTACAGCACACTGGCGGGGAGATTTTCCCGGTCTGCGGCTTACTGGGGACTGACAACCCCGGAATATTTTCTGgcgc > 2:219546/1‑250 (MQ=255) ttAGGGCGTATGCACCAGACGGGGCGCAAACAGCTTTTTATCCATCGCCCGACCATCGGTTTGAACGAATATCTCATTGAGCCACGCAAGCTGTTTGAGGACGCTACACTGATACCTTCCGGGTTGAAAGCGGCATTCCTGAAAGCGACAGATGAGCTGATTGCCGCCGTTACAGCACACTGGCGGGAAGATTTCACCGCTCTGCGGCTACATGGAGACTGCCACGCCGGGAATATTTTCTGGCGCGCTg > 1:738638/1‑250 (MQ=255) cACCAGACGGGGCGCAAACAGCTTTTTATCCATCGCCCGACCATCGGTTTGAACGAATATCTCATTGAGCCACGCAAGCTGTTTGAGGACGCTACACTGATACCTTCCGGGTTGAAAGCGGCATTCCTGAAAGCGACAGATGAGCTGATTGCCGCCGTTACAGCACACTGGCGGGAAGAATTTAACGTTCTGCGGCTACATGGGGACCGCCACGCCCGGAATATTTTCTTGCGCGGTGGTCCAAtgtttg > 1:586134/1‑250 (MQ=255) aCCAGACGGGGCGCAAACAGCTTTTTATCCATCGCCCGACCATCGGTTTGAACGAATATCTCATTGAGCCACGCAAGCTGTTTGAGGACGCTACACTGATACCTTCCGGGTTGAAAGCGGCATTCCTGAAAGCGACAGATGAGCTGATTGCCGCCGTTACAGCACACTGGCGGGAAGATTTCACCGTTCTGCGGCTACCAGGAGACTGCCCCGCCGGGGATATTCTCCTGCGCCATGGGGCCAtgtttgt > 1:807091/1‑250 (MQ=255) gACGGGGCGCAAACAGCTTTTTATCCATCGCCCGACCATCGGTTTGAACGAATATCTCATTGAGCCACGCAAGCTGTTTGAGGACGCTACACTGATACCTTCCGGGTTGAAAGCGGCATTCCTGAAAGCGACAGATGAGCTGATTGCCGCCGTTACAGCACACTGGCGGGAAGATTTCACCGTTCTGCGGCTACATGGAGACTGCCACGCCGGGAATATTCTCTGGCGCGATGGTCCAATGTTTGTTGAt < 1:245995/250‑1 (MQ=255) cTTTTTATCCATCGCCCGACCATCGGTTTGAACGAATATCTCATTGAGCCACGCAAGCTGTTTGAGGACGCTACACTGATACCTTCCGGGTTGAAAGCGGCATTCCTGAAAGCGACAGATGAGCTGATTGCCGCCGTTACAGCACACTGGCGGGAAGATTTCACCGTTCTGCGGCTACATGGAGACTGCCACGCCGGGAATATTCTCTGGCGCGATGGTCCAATGTTTGTTGATCTGGATGATGCACGTa < 2:912383/250‑1 (MQ=255) tttATCCATCGCCCGACCATCGGTTTGAACGAATATCTCATTGAGCCACGCAAGCTGTTTGAGGACGCTACACTGATACCTTCCGGGTTGAAAGCGGCATTCCTGAAAGCGACAGATGAGCTGATTGCCGCCGTTACAGCACACTGGCGGGGAGATTTCAACGTTCTGCGGCTACCTGGAGACTGCCACGCCGGGAATATTCTCTGGCGCGGTGGGCCAATGATTGTTGATCTGGATGATGCACGCAATg > 1:730795/1‑250 (MQ=255) tCGCCCGACCATCGGTTTGAACGAATATCTCATTGAGCCACGCAAGCTGTTTGAGGACGCTACACTGATACCTTCCGGGTTGAAAGCGGCATTCCTGAAAGCGACAGATGAGCTGATTGCCGCCGTTACAGCACACTGGCGGGGAGGTTTCACCGTTTTGCGGCTACACGGAGACTGCCACCCCGGGGATATTCTCTGGTGCGATGGTCCCCTGTTTGTTGGTCTGGATGATGCACGTAATGGTTCAGcc > 2:527111/1‑250 (MQ=255) cGCCCGACCATCGGTTTGAACGAATATCTCATTGAGCCACGCAAGCTGTTTGAGGACGCTACACTGATACCTTCCGGGTTGAAAGCGGCATTCCTGAAAGCGACAGATGAGCTGATTGCCGCCGTTACAGCACACTGGCGGGAAGATTTTTCCGTTTTGCGGCTACATGGGGACTGCCCCGCCGGGGATATTTTCTGGCGCGATGGGCCACTGTTTGTTGATCCGTAGTATGCACGTAATAGGCCAGCCg > 1:139178/1‑250 (MQ=255) aCCATCGGTTTGAACGAATATCTCATTGAGCCACGCAAGCTGTTTGAGGACGCTACACTGATACCTTCCGGGTTGAAAGCGGCATTCCTGAAAGCGACAGATGAGCTGATTGCCGCCGTTACAGCACACTGGCGGGAAGATTTCACCGTTCTGCGGCTACATTGAGACTGCCACGCCGGGGATATTCTCTGGCGCGATGGTCCAATGTTTGTTGATCTTGATGATGCACGTAATGGTCCAGCCGTTCAgg > 1:261371/1‑250 (MQ=255) ccATCGGTTTGAACGAATATCTCATTGAGCCACGCAAGCTGTTTGAGGACGCTACACTGATACCTTCCGGGTTGAAAGCGGCATTCCTGAAAGCGACAGATGAGCTGATTGCCGCCGTTACAGCACACTGGCGGGAAGAATTTACCGCTCTTGGGCCACATGGAGACTGCCACGCCGGGGATATTTTCTGGCGCGGTGGGCCAATGTTTGTTGATCTGGGTGGTTCACGGAATGGGCCAGGCGTTCCggg > 2:748676/1‑249 (MQ=255) aTCGGTTTGAACGAATATCTCATTGAGCCACGCAAGCTGTTTGAGGACGCTACACTGATACCTTCCGGGTTGAAAGCGGCATTCCTGAAAGCGACAGATGAGCTGATTGCCGCCGTTACAGCACACTGGCGGGAAAATTTTCCCGTTCTGGGGCTACATGGGGACTGCCACGCCGGGGATATTTTCTGGCGCGATGGGCCCATGTTTGTTGGTCTGGATGATGCACGTAATGGTCCAGCCGTTCAGGG‑tt > 1:167458/1‑250 (MQ=255) gTTTGAACGAATATCTCACTGAGCCACGCAAGCTGTTTGAGGACGCTACACTGATACCTTCCGGGTTGAAAGCGGCATTCCTGAAAGCGACAGATGAGCTGATTGCCGCCGTTACAGCACACTGGCGGGGAGATTTCACCGTTCTTCGGCTACATGGAGGCTGCCACGCCGGGGATATTCTCTGGGGCGGTGGTCCCAAGTTTGTTGGTCTTGGTTGTGCACGGAATTGTCCCAGCGTTTAGGG‑TTtgtg > 1:484224/1‑250 (MQ=255) gAACGAATATCTCATTGAGCCACGCAAGCTGTTTGAGGACGCTACACTGATACCTTCCGGGTTGAAAGCGGCATTCCTGAAAGCGACAGATGAGCTGATTGCCGCCGTTACAGCACACTGGCGGGAAGATTTCACCGTTCTTCGGCCACATGGAGACTGCCACGCCGGGGATATTCTCTGGCGCGACGGGCCAATGTTTGTTGTTCTGGATGATTCACGTAATGGGTCAGCCGTTCCGGG‑TTTTTGGGTg > 1:689397/1‑250 (MQ=255) gAACGAATATCTCATTGAGCCACGCAAGCTGTTTGAGGACGCTACACTGATACCTTCCGGGTTGAAAGCGGCATTCCTGAAAGCGACAGATGAGCTGATTGCCGCCGTTACAGCACACTGGCGGGAAGATTTCACCGTTCTGCGGCTACATGGAGACTGCCACGCCGGGAATATTCTCTGGCGCGATGGTCCAATGTTTGTTGATCTGGATGATGCACGTAATGGTCCAGCCGTTCAGGA‑TTTGTGGATg > 1:757615/1‑250 (MQ=255) atCTCATTGAGCCACGCAAGCTGTTTGAGGACGCTACACTGATACCTTCCGGGTTGAAAGCGGCATTCCTGAAAGCGACAGATGAGCTGATTGCCGCCGTTACAGCACACTGGCGGGAAGATTTTACCGTTCTGCGGCTACATGGAGACTGCCACGCCGGGGATATTCTCTGGCGCGATGGTCCAATGTTTGTTGATCTGGATGATGCACGTAATGGGCCAGCCGTTCAGGA‑TTTGTGGATGTTGCTCaa > 1:605647/1‑250 (MQ=255) cATTGAGCCACGCAAGCTGTTTGAGGACGCTACACTGATACCTTCCGGGTTGAAAGCGGCATTCCTGAAAGCGACAGATGAGCTGATTGCCGCCGTTACAGCACACTGGCGGGAAGATTTTACCCTTCTTCGGGTACATGGAGAATGCCACCCCGGGAGTATTCTCTTGGGCGATGGGCCCATGGTTTTTGATCTGGATGATGCACGTAATGGGCCAGCCGTTCAGGAGTTTGTGG‑TGTTGGTCAATTGc > 2:68266/1‑250 (MQ=255) tGAGCCACGCAAGCTGTTTGAGGACGCTACACTGATACCTTCCGGGTTGAAAGCGGCATTCCTGAAAGCGACAGATGAGCTGATTGCCGCCGTTACAGCACACTGGCGGGAAGATTTTACCGTTCTGCGGCTACATGGAGACTGCCACGCCGGGAATATTCTCTGGCGCGCTGGTCCCATGTTTGTTGATCTGGATGATGCACGGAATGGTCCAGCCGTTCAGGA‑TTTGTGGGTGTTGCTCCATGGCgg > 1:723437/1‑248 (MQ=255) ccACGCAAGCTGTTTGAGGACGCTACACTGATACCTTCCGGGTTGAAAGCGGCATTCCTGAAAGCGACAGATGAGCTGATTGCCGCCGTTACAGCACACTGGCGGGAAGATTTCACCGTTCTGCGGCTACATGGAGACTGCCACGCCGGGGATATTCTCTGGCGCGATGGTCCCATGTTTTTTGATCTGGATGATGCACGTAATGGTCCAGCCGTTCAGGG‑TTTGTGGGTGTTGCTCAATGGCGATaaaa > 1:470893/1‑249 (MQ=255) aCGCAAGCTGTTTGAGGACGCTACACTGATACCTTCCGGGTTGAAAGCGGCATTCCTGAAAGCGACAGATGAGCTGATTGCCGCCGTTACAGCACACTGGCGGGAAGAGTTCACCGTTTTGCGGCTACATGGAGACTGGCACGCCGGGGATATTTTCTGGCGCGATGGTCCAATGTTTGTTGATCTGGATGATGCACGTAATGGTCCAGCCGTTCAGGG‑TTTGTGGGTGTTGCTCAATGGCGGTAAAGcc > 1:210756/1‑250 (MQ=255) cAAGCTGTTTGAGGACGCTACACTGATACCTTCCGGGTTGAAAGCGGCATTCCTGAAAGCGACAGATGAGCTGATTGCCGCCGTTACAGCACACTGGCGGGGAGATTTTACCGTTCTGCGGCTACATGGGGACCGCCACGCCGGGGATATTTTCTGGCGCGGTGGTCCCATTTTTTTTTTTCTGGATGATGCACGGAATGGTCCAGCCGGTCAGGG‑TTTTTGGATGTTGTTCAATGGCGATAAAAcccgg > 2:574119/1‑247 (MQ=255) gCTGTTTGAGGACGCTACACTGATACCTTCCGGGTTGAAAGCGGCATTCCTGAAAGCGACAGATGAGCTGATTGCCGCCGTTACAGCACACTGGCGGGAAGATTTTACCGTTCTGCGGCTACATGGAGACTGCCACGCCGGGGATATTCTCTGGCGCGGTGGTCCCATGTTTTTTGGTCTGGGTGATGCACGTAATGGTCCAGCCGGTCAGGG‑TTTGTGGATGTTGCTCAATGGCGATAAAGCCGagcag > 1:542394/1‑250 (MQ=255) tGTTTGAGGACGCTACACTGATACCTTCCGGGTTGAAAGCGGCATTCCTGAAAGCGACAGATGAGCTGATTGCCGCCGTTACAGCACACTGGCGGGAAGATTTCTCCGTTCTGCGGACACATGGAGACTGCCACCCCCGGGATATTCTCTGTCGCGCTGGGCCACTGTTTGTTGCTCTGGGTGGTGCACGTAATGGGCTCGCCGCTTAGGG‑TTTGTGGGTGTTTGTCCATGGGGATAAAgtgacgccgcg > 2:14109/1‑240 (MQ=255) gACGCTACACTGAGCCCGTCCGGGTTGAAAGCGGAATTCCTGAAAGTGACAGATGACCTGATGGCCGCCGTTACAGCACACTGGCGGGAAGATTTCACCGTTCTGCGGCTACATGGAGACTGCCACGCCGGGAATATTCTCTGGCGCGATGGTCCAATGTTTGTTGATCTGGATGATGCACGTAATGGTCCAGCCGTTCAGGA‑TTTGTGGATGTTGCTCAATGGCGATAAAGCCGAGCAGCGGAT‑GCAAc < 2:360710/250‑1 (MQ=255) cGCTACACTGATACCTTCCGGGTTGAAAGCGGCATTCCTGAAAGCGACAGATGAGCTGATTGCCGCCGTTACAGCACACTGGCGGGGAGATTTCACCGTTCTGCGGCTACATGGAGACTGCCACGCCGGGGATATTCTCTGGCGCGATGGGCCCATGTTTGTTGGTCTGGGTGATGCCCGTAATGGTCCAGCCGTTCAGGA‑TTTGTGGATGTTGCTCAATGGCGATAAAGCCGAGCAGCGGAT‑GCAACTg > 2:25653/1‑250 (MQ=255) cGCTACACTGATACCTTCCGGGTTGAAAGCGGCATTCCTGAAAGCGACAGATGAGCTGATTGCCGCCGTTACAGCACACTGGCGGGAAGATTTCACCGTTCTGCGGCTACATGGAGACTGCCACGCCGGGAATATTCTCTGGCGCGATGGTCCAATGTTTGTTGATCTGGATGATGCACGTAATGGTCCAGCCGTTCAGGA‑TTTGTGGATGTTGCTCAATGGCGATAAAGCCGAGCAGCGGAT‑GCAACTg < 2:163892/250‑1 (MQ=255) tACACTGATACCTTCCGGGTTGAAAGCGGCATTCCTGAAAGCGACAGATGAGCTGATTGCCGCCGTTACAGCACACTGGCGGGAAGATTTTTCCGTTCTGCGGCTACATGGAGACTGCCACCCCGGGGATATTTTCCGGGGCGGGGGTCCAAAGTTTGTTGGTCTGGGTGGTGCACGGAATGGTCCAGCCGGTTAGGG‑TTTTTGGGTGTTGGTCAATGGGGATAAAGCCCGGCAGCGGGT‑TGAACTggg > 2:304324/1‑248 (MQ=255) gcTGATACCGTCCGGGTTGAAAGCGGCTTTCCGGAAAGCAACAGAGGAGCTGTTTGCCGCCGTTACAGCACACTGGCGGGAAGATTTCACCGTTCTGCGGCTACATGGAGACTGCCACGCCGGGAATATTCTCTGGCGCGATGGTCCAATGTTTGTTGATCTGGATGATGCACGTAATGGTCCAGCCGTTCAGGA‑TTTGTGGATGTTGCTCAATGGCGATAAAGCCGAGCAGCGGAT‑GCAACTGGAAACt < 2:769639/249‑1 (MQ=255) tACCTTCCGGGTTGAAAGCGGCATTCCTGAAAGCGACAGATGAGCTGATTGCCGCCGTTACAGCACACTGGCGGGAAGATTTCACCGTTCTGCGGCTACATGGAGACTGCCACGCCGGGGATATTCTCTGGCGCGATGGTCCAATGTTTGTTGATCTGGATGATGCACGTAATGGTCCAGCCGTTCAGGA‑TTTGTGGATGTTGCTCAATGGCGATAAAGCCGAGCAGCGGAT‑GCAACTGGGAACtattat > 1:266448/1‑250 (MQ=255) aCCTTCCGGGTTGAAAGCGGCATTCCTGAAAGCGACAGATGAGCTGATTGCCGCCGTTACAGCACACTGGCGGGGAGATTTCCCCGTTCTGCGGCTACATGGAGACTGCCACGCCGGGGATATTTTCTGGCGCGGTGGGCCAATGTTTGTTGATTTGGGTGATGGACGGAATGGTCCAGCCGTTCAGGA‑TTTGTGGATGTTGCTCAATGGCGATAAAGCCGCGCAGCGGAG‑GCAACTGGGAACTattatt > 2:964132/1‑250 (MQ=255) cTTCCGGGTTGAAAGCGGCATTCCTGAAAGCGACAGATGAGCTGATTGCCGCCGTTACAGCACACTGGCGGGAAGATTTCACCGTTCTGCGGCTACATGGAGACTGCCACGCCGGGAATATTCTCTGGCGCGATGGTCCAATGTTTGTTGATCTGGATGATGCACGTAATGGTCCAGCCGTTCAGGA‑TTTGTGGATGTTGCTCAATGGCGATAAAGCCGAGCAGCGGAT‑GCAACTGGAAACTATTATTGa < 1:339/250‑1 (MQ=255) tCCGGGTTGAAAGCGGCATTCCTGAAAGCGACAGATGAGCTGATTGCCGCCGTTACAGCACACTGGCGGGAAGATTTCACCGTTCTGCGGCTACATGGAGACTGCCACGCCGGGGATATTCTCTTGCGCGATGGTCCCATGTTTGTTGATCTGGGTGATGCACGGAATGGTCCAGCCGTTCAGGA‑TTTGTGGGTGTTGCTCCATGGCGATAAAGCCGAGCAGCGGGT‑GCAACTGGGAACTATTATTTAAg > 1:894561/1‑250 (MQ=255) ttCCTGAAAGCGACAGATGAGCTGATTGCCGCCGTTACAGCACACTGGCGGGAAGATTTTACCGTTCTGCGGCCACATGGAGACCGCCCCGCCGGGGATATTCTCTGGCGCGGTGGGCCAATGTTTGTTGATCTGGATGATGCACGTAATGGTCCAGCCGTTCAGGG‑TTTGTGGGTGTTGGTCAAAGGCGGTAAAACCGAGCCGCGGAG‑GCAACTGGAAAATTTTATTTAACGGTATGAAGAATTTaagt > 2:158484/1‑247 (MQ=255) ccTGAAAGCGACAGATGAGCTGATTGCCGCCGTTACAGCACACTGGCGGGAAGATTTCACCGTTCTGCGGCTACATGGAGACTGCCACGCCGGGGATATTTTCTGGCGCGGTGGTCCAATGTTTGTTTATCTGGATGATGCACGTAATGGTCCAGCCGGTCAGGA‑TTTGTGGATGTTGCTCAATGGCGATAAAGCCGAGCAGCGGAT‑GCAAATGGGAACTATTATTGAAGCTTATTAAGAATTTTGCGAg > 1:953390/1‑250 (MQ=255) tGAAAGCGACAGATGAGCTGATTGCCGCCGTTACAGCACACTGGCGGGAAGATTTTACCGTTCTGCGGCTACATGGAGACTGCCACGCCGGGAATATTCTCTGGCGCGATGGTCCAATGTTTGTTGATCt > 1:126017/1‑130 (MQ=255) gAAAGCGACAGATGAGCTGATTGCCGCCGTTACAGCACACTGGCGGGAAGATTTCACCGTTCTGCGGCTACATGGAGACTGCCACGCCGGGAATATTCTCTGGCGCGATGGTCCAATGTTTGTTGATCTg < 2:126017/130‑1 (MQ=255) aaaGCGACAGATGAGCTGATTGCCGCCGTTACAGCACACTGGCGGGGAGATTTCACCGTTCTGCGGCTACATGGAGACTGCCACCCCGGGGATATTTTCTGGCGCGGTGGTCCCATGTTTTTTGATCTGGGTGATGCACGTAATGGTCCAGCCGGTCCGGG‑TTTGTGGGTGTTGCTCCATGGCGGTAAAGCCGAGCAGCGGGTGGCAATTGG‑AACTCTTATTTTAGCTTATGTAGAATTTAGCGGGGTCg > 2:31308/1‑250 (MQ=255) gccgccAGATGGGTTAATTGCCGCCGTTACAGCCCACTGGCGGGAAGATTTCACCGTTCTGCGGCTACATGGAGACTGCCACGCCGGGAATATTCTCTGGCGCGATGGTCCAATGTTTGTTGATCTGGATGATGCACGTAATGGTCCAGCCGTTCAGGA‑TTTGTGGATGTTGCTCAATGGCGATAAAGCCGAGCAGCGGAT‑GCAACTGGAAACTATTATTGAAGCTTATGAAGAATTTAGCGAGTTCGac < 2:492567/245‑1 (MQ=255) acacTGGCGGGAAGATTTTACCGTTCTGCGGCTACATGGAGACTGCCACGCCGGGGATATTCTCTTGCGCGATGGGCCCATGTTTGTTGATCTGGATGATGCACGTAAAGGTCCAGCCGTTCAGGA‑TTTTTGGATGTTGCTCAATGGCGATAAAGCCGAGCAGCGGAT‑GCAACTGGAAACTATTATTTAAGCTTATGAAGAATTTAGCGAGTTCGACACCGCTGAAATCGGACTGATTGAACCTTTAcgc > 1:17723/1‑250 (MQ=255) gAAGATTTCACCGTTCTGCGGCTACATGGAGACTGCCACGCCGGGAATATTCTCTGGCGCGATGGTCCAATGTTTGTTGATCTGGATGATGCACGTAATGGTCCAGCCGTTCAGGA‑TTTGTGGATGTTGCTCAATGGCGATAAAGCCGAGCAGCGGAT‑GCAACTGGAAACTATTATTGAAGCTTATGAAGAATTTAGCGAGTTCGACACCGCTGAAATCGGACTGATTGAACCTTTACGCGCCATGCGtt > 1:440661/1‑250 (MQ=255) gATTTCACCGTTCTGCGGCTACATGGAGACTGCCACGCCGGGAATATTCTCTGGCGCGATGGTCCAATGTTTGTTGATCTGGATGATGCACGTAATGGTCCAGCCGTTCAGGA‑TTTGTGGATGTTGCTCAATGGCGATAAAGCCGAGCAGCGGAT‑GCAACTGGAAACTATTATTGAAGCTTATGAAGAATTTAGCGAGTTCGACACCGCTGAAATCGGACTGATTGAACCTTTACGCGCCATGCGTTTgg > 1:334448/1‑250 (MQ=255) aTTTCACCGTTCTGCGGCTACATGGAGACTGCCACGCCGGGAATATTCTCTGGCGCGATGGTCCAATGTTTGTTGATCTGGATGATGCACGTAATGGTCCAGCCGTTCAGGA‑TTTGTGGATGTTGCTCAATGGCGATAAAGCCGAGCAGCGGAT‑GCAACTGGAAACTATTATTGAAGCTTATGAAGAATTTAGCGAGTTCGACACCGCTGAAATCGGACTGATTGAACCTTTACGCGCCATGCGTTTGGt > 1:242776/1‑250 (MQ=255) gCGGCTACATGGAGACTGCCACGCCGGGAATATTCTCTGGCGCGATGGTCCAATGTTTGTTGATCTGGATGATGCACGTAATGGTCCAGCCGTTCAGGA‑TTTGTGGATGTTGCTCAATGGCGATAAAGCCGAGCAGCGGAT‑GCAACTGGAAACTATTATTGAAGCTTATGAAGAATTTAGCGAGTTCGACACCGCTGAAATCGGACTGATTGAACCTTTACGCGCCATGCGTTTGGTTTATTATCTTGcc > 1:914143/1‑250 (MQ=255) ggAGACTGCCACGCCGGGAATATTCTCTGGCGCGATGGTCCAATGTTTGTTGATCTGGATGATGCACGTAATGGTCCAGCCGTTCAGGA‑TTTGTGGATGTTGCTCAATGGCGATAAAGCCGAGCAGCGGAT‑GCAACTGGAAACTATTATTGAAGCTTATGAAGAATTTAGCGAGTTCGACACCGCTGAAATCGGACTGATTGAACCTTTACGCGCCATGCGTTTGGTTTATTATCTTGCCTGGCTAATgc > 2:878365/1‑250 (MQ=255) gagaCTGCCACGCCGGGAATATTCTCTTGCGCGATGGTCCAATGTTTTTTGATCTGGATGATGCACGTAATGGTCCAGCCGTTCAGGA‑TTTGTGGATGTTGCTCAATGGCGATAAAGCCGAGCAGCGGAT‑GCAACTGGAAACTATTATTGAAGCTTATGAAGAATTTAGCGAGTTCGACACCGCTGAAATCGGACTGATTGAACCTTTACGCGCCATGCGTTTGGTTTATTATCTTGCCTGGCTAATgc < 2:760250/249‑1 (MQ=255) agccggCCACGCCGGGAATATTCTCTGGCGCGATGGGCCAATGTTTGTTGATCTGGATGATGCACGTAATGGTCCAGCCGTTCAGGA‑TTTGTGGATGTTGCTCAATGGCGATAAAGCCGAGCAGCGGAT‑GCAACTGGAAACTATTATTGAAGCTTATGAAGAATTTAGCGAGTTCGACACCGCTGAAATCGGACTGATTGAACCTTTACGCGCCATGCGTTTGGTTTATTATCTTGCCTGGCTAATgcgg < 2:585673/245‑1 (MQ=255) ccGGGAATATTCTCTGGCGCGATGGTCCAATGTTTGTTGATCTGGATGATGCACGTAATGGTCCAGCCGTTCAGGA‑TTTGTGGATGTTGCTCAATGGCGATAAAGCCGAGCAGCGGAT‑GCAACTGGAAACTATTATTGAAGCTTATGAAGAATTTAGCGAGTTCGACACCGCTGAAATCGGACTGATTGAACCTTTACGCGCCATGCGTTTGGTTTATTATCTTGCCTGGCTAATGCGGCGTTGGGCTGa > 1:813669/1‑250 (MQ=255) ccGGGAATATTCTCTGGCGCGATGGTCCAATGTTTGTTGATCTGGATGATGCACGTAATGGTCCAGCCGTTCAGGA‑TTTGTGGATGTTGCTCAATGGCGATAAAGCCGAGCAGCGGAT‑GCAACTGGAAACTATTATTGAAGCTTATGAAGAATTTAGCGAGTTCGACACCGCTGAAATCGGACTGATTGAACCTTTACGCGCCATGCGTTTGGTTTATTATCTTGCCTGGCTAATGCGGCGTTGGGCTGa > 2:684238/1‑250 (MQ=255) ccGGGAATATTCTCTGGCGCGATGGTCCAATGTTTGTTGATCTGGATGATGCACGTAATGGTCCAGCCGTTCAGGA‑TTTGTGGATGTTGCTCAATGGCGATAAAGCCGAGCAGCGGAT‑GCAACTGGAAACTATTATTGAAGCTTATGAAGAATTTAGCGAGTTCGACACCGCTGAAATCGGACTGATTGAACCTTTACGCGCCATGCGTTTGGTTTATTATCTTGCCTGGCTAATGCGGCGTTGGGCTGa < 2:133396/250‑1 (MQ=255) | CGGTTGGGCGTTATTTAGGGCGTATGCACCAGACGGGGCGCAAACAGCTTTTTATCCATCGCCCGACCATCGGTTTGAACGAATATCTCATTGAGCCACGCAAGCTGTTTGAGGACGCTACACTGATACCTTCCGGGTTGAAAGCGGCATTCCTGAAAGCGACAGATGAGCTGATTGCCGCCGTTACAGCACACTGGCGGGAAGATTTCACCGTTCTGCGGCTACATGGAGACTGCCACGCCGGGAATATTCTCTGGCGCGATGGTCCAATGTTTGTTGATCTGGATGATGCACGTAATGGTCCAGCCGTTCAGGA‑TTTGTGGATGTTGCTCAATGGCGATAAAGCCGAGCAGCGGAT‑GCAACTGGAAACTATTATTGAAGCTTATGAAGAATTTAGCGAGTTCGACACCGCTGAAATCGGACTGATTGAACCTTTACGCGCCATGCGTTTGGTTTATTATCTTGCCTGGCTAATGCGGCGTTGGGCTGA > NZ_CP009273/4036145‑4036634 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |