New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NZ_CP009273	= 360286	54 (0.650)	10 (0.120) +AATTC	8/486	12.0	17.1%	intergenic (‑217/+69)	lacZ/BW25113_RS23320	beta‑galactosidase/relaxase/mobilization nuclease domain‑containing protein
	?	NZ_CP009273	3416618 =	45 (0.550)					intergenic (+65/+166)	yhdZ/rrf	amino acid ABC transporter ATP‑binding protein/5S ribosomal RNA
Rejected: Coverage evenness skew score above cutoff.
Rejected: Frequency below/above cutoff threshold.

GCTGGCGCAGTCGGGTATGACAATGTTGTGTGTAACACATGAGATGGGGTTTGCACGAACCGTCGCTGACCGGGTAATTTTTATGGATCGTGGGGAAATAGTGGAGCAAGCTGCACCTGATGAATTTTTTGCGCATCCTAAATCAGAGCGTACGAGGGCATTTTTATCGCAGGTAATCCATTAATTGAATGTTAGTTCGAAAAGCAAAAAGGCCATCCTTTCGGATGGCCTTTCGCTTGATTTGATGTCTGGCAGTTTATGGCGGGCGT‑CCTGCCCGCCACCCTCCGGGCCGTTGCTTCGCAACGTTCAAATCCGCTCCCGGCGGATTTGTCCTACTCGGGAGAGTGTTCACCGA‑CAAACAACAGATAAAACAAAAGGCCCAGTCTTCCGACTGAGCCTTTTGTTTTATTTGATG‑TCTGGCAGTTCCCTACTCTCGCATGGGGAGACCCCACACTACCATCGGCGCTACGGCGTTTCACTTCTGAGTTCGGCAT  >  NZ_CP009273/3416370‑3416863                                                                                                                                                                                                                                                         |                                                                                                                                                                                                                                                         gccggccctgTCGGGTTTTACAATAGTGTGGGGAACACATTAGGTGGGGTTTGCACGAACCGTCGCTGACCGGGTAATTTTTATGGATCGTGGGGAAATAATGGAACAAGCTGCACCTGATTAATTTTTTGCGCATCCTAAATCAGAGCGTACGAGGGCATTTTTATCGCAGGTAATCCATTAATTGAATGTTAGTTCGAAAAGCAAAAAGGCCATCCTTTCGGATGGCCTTTCGCTTGATTTGATGTCt                                                                                                                                                                                                                                                         <  1:506436/241‑1 (MQ=255)        cAGTCGGGTATGACAATGTTGTGTGTAACACATGAGATGGGGTTTGCACGAACCGTCGCTGACCGGGTAATTTTTATGGATCGTGGGGAAATAGTGGAGCAAGCTGCACCTGATGAATTTTTTGCGCATCCTAAATCAGAGCGTACGAGGGCATTTTTATCGCAGGTAATCCATTAATTGAATGTTAGTTCGAAAAGCAAAAAGGCCATCCTTTCGGATGGCCTTTCGCTTGATTTGATGTCTGGCAGtt                                                                                                                                                                                                                                                  >  1:722055/1‑250 (MQ=255)          gTCGGGTATGACAATGTTGTGTGTAACACATGAGATGGGGTTTGCACGAACCGTCGCTGACCGGGTAATTTTTATGGATCGTGGGGAAATAGTGGAGCAAGCTGCACCTGATGAATTTTTTGCGCATCCTAAATCAGAGCGTACGAGGGCATTTTTATCGCAGGTAATCCATTAATTGAATGTTAGTTCGAAAAGCAAAAAGGCCATCCTTTCGGATGGCCTTTCGCTTGATTTGATGTCTGGCAGTTTa                                                                                                                                                                                                                                                <  1:619162/250‑1 (MQ=255)            cGGGTATGACAATGTTGTGTGTAACACATGAGATGGGGTTTGCACGAACCGTCGCTGACCGGGTAATTTTTATGGATCGTGGGGAAATAGTGGAGCAAGCTGCACCTGATGAATTTTTTGCGCATCCTAAATCAGAGCGTACGAGGGCATTTTTATCGCAGGTAATCCATTAATTGAATGTTAGTTCGAAAAGCAAAAAGGCCATCCTTTCGGATGGCCTTTCGCTTGATTTGATGTCTGGCAGTTTATg                                                                                                                                                                                                                                              >  2:189117/1‑250 (MQ=255)               gTATGACAATGTTGTGTGTAACACATGAGATGGGGTTTGCACGAACCGTCGCTGACCGGGTAATTTTTATGGATCGTGGGGAAATAGTGGAGCAAGCTGCACCTGATGAATTTTTTGCGCATCCTAAATCAGAGCGTACGAGGGCATTTTTATCGCAGGTAATCCATTAATTGAATGTTAGTTCGAAAAGCAAAAAGGCCATCCTTTCGGATGGCCTTTCGCTTGATTTGATGTCTGGCAGTTTATggcg                                                                                                                                                                                                                                           >  1:12159/1‑250 (MQ=255)                        tgttgtGTGTAACACATGAGATGGGGTTTGCACGAACCGTCGCTGACCGGGTAATTTTTATGGATCGTGGGGAAATAGTGGAGCAAGCTGCACCTGATGAATTTTTTGCGCATCCTAAATCAGAGCGTACGAGGGCATTTTTATCGCAGGTAATCCATTAATTGAATGTTAGTTCGAAAAGCAAAAAGGCCATCCTTTCGGATGGCCTTTCGCTTGATTTGATGTCTGGCAGTTTATGGCGGGCGT‑CCTg                                                                                                                                                                                                                                 <  1:558712/250‑1 (MQ=255)                           tgtgtgTAACACATGAGATGGGGTTTGCACGAACCGTCGCTGACCGGGTAATTTTTATGGATCGTGGGGAAATAGTGGAGCAAGCTGCACCTGATGAATTTTTTGCGCATCCTAAATCAGAGCGTACGAGGGCATTTTTATCGCAGGTAATCCATTAATTGAATGTTAGTTCGAAAAGCAAAAAGGCCATCCTTTCGGATGGCCTTTCGCTTGATTTGATGTCTGGCAGTTTATGGCGGGCGG‑CCTGccc                                                                                                                                                                                                                              >  1:674844/1‑250 (MQ=255)                            gtgtgtAACACATGAGATGGGGTTTGCACGAACCGTCGCTGACCGTGTAATTTTTATGTATCGTGGGGAAATAGTGGAGCAAGCTGCACCTGATGAATTTTTTGCGCATCCTAAATCAGAGCGTACGAGGGCATTTTTATCGCAGGTAATCCATTAATTGAATGTTAGTTCGAAAAGCAAAAAGGCCATCCTTTCGGATGGCCTTTCGCTTGAGTTGATGTCTGGCAGTTTATGGCGGGCGT‑CCTTCCCg                                                                                                                                                                                                                             <  2:644705/250‑1 (MQ=255)                            gtgtgtAACACATGAGATGGGGTTTGCACGAACCGTCGCTGACCGGGTAATTTTTATGGATCGTGGGGAAATAGTGGAGCAAGCTGCACCTGATGAATTTTTTGCGCATCCTAAATCAGAGCGTACGAGGGCATTTTTATCGCAGGTAATCCATTAATTGAATGTTAGTTCGAAAAGCAAAAAGGCCATCCTTTCGGATGGCCTTTCGCTTGATTTGATGTCTGGCAGTTTATGGCGGGGGT‑CCTTcccc                                                                                                                                                                                                                             >  1:685232/1‑249 (MQ=255)                                    cacaTGAGATGGGGTTTGCACGAACCGTCGCTGACCGGGTAATTTTTATGGATCGTGGGGAAATAGTGGAGCAAGCTGCACCTGATGAATTTTTTGCGCATCCTAAATCAGAGCGTACGAGGGCATTTTTATCGCAGGTAATCCATTAATTGAATGTTAGTTCGAAAAGCAAAAAGGCCATCCTTTCGGATGGCCTTTCGCTTGATTTGATGTCTGGCAGTTTATGGCGGGCGT‑GCTGCCCGCCCCCCTc                                                                                                                                                                                                                     >  2:688237/1‑250 (MQ=255)                                         gagaTGGGGTTTGCACGAACCGTCGCTGACCGGGTAATTTTTATGGATCGTGGGGAAATAGTGGAGCAAGCTGCACCTGATGAATTTTTTGCGCATCCTAAATCAGAGCGTACGAGGGCATTTTTATCGCAGGTAATCCATTAATTGAATGTTAGTTCGAAAAGCAAAAAGGCCATCCTTTCGGATGGCCTTTCGCTTGATTTGATGTCTGGCAGTTTATGGCGGGCGG‑CCCGCccccccccccccccgc                                                                                                                                                                                                                >  1:691757/1‑246 (MQ=255)                                          agaTGGGGTTTGCACGAACCGTCGCTGACCGGGTAATTTTTATGGATCGTGGGGAAATAGTGGAGCAAGCTGCACCTGATGAATTTTTTGCGCATCCTAAATCAGAGCGTACGAGGGCATTTTTATCGCAGGTAATCCATTAATTGAATGTTAGTTCGAAAAGCAAAAAGGCCATCCTTTCGGATGGCCTTTCGCTTGATTTGATGTCTGGCAGTTTATGGCGGTGGG‑CCTGCCCGCccccccccccccc                                                                                                                                                                                                               >  2:500239/1‑245 (MQ=255)                                             tGGGGTTTGCACGAACCGTCGCTGACCGGGTAATTTTTATGGATCGTGGGGAAATAGTGGAGCAAGCTGCACCTGATGAATTTTTTGCGCATCCTAAATCAGAGCGTACGAGGGCATTTTTATCGCAGGTAATCCATTAATTGAATGTTAGTTCGAAAAGCAAAAAGGCCATCCTTTCGGATGGCCTTTCGCTTGATTTGATGTCTGGCAGTTTATGGCGGGCGT‑CCTGCCCGCCACCCTCCGGGCCGtt                                                                                                                                                                                                            <  1:380485/250‑1 (MQ=255)                                                 gTTGGCACGAACCGTCGCTGACCGGGTAATTTTTATGGTTCGTGGGGAAATAGTGGAGCAAGCTGCACCTGATGAATTTTTTGCGCATCCTAAATCAGAGCGTACGAGGGCATTTTTATCGCAGGTAATCCATTAATTGAATGTTAGTTCGAAAAGCAAAAAGGCCATCCTTTCGGATGGCCTTTCGCTTGATTTGATGTCTGGCAGTTTATGGCGGGCGT‑CCTGCCCGCCACCCTCCGGGCCGTTGCtt                                                                                                                                                                                                        <  2:735233/250‑1 (MQ=255)                                                             cGTCGCTGACCGGGTAATTTTTATGGATCGTGGGGAAATAGTGGAGCAAGCTGCACCTGATGAATTTTTTGCGCATCCTAAATCAGAGCGTACGAGGGCATTTTTATCGCAGGTAATCCATTAATTGAATGTTAGTTCGAAAAGCAAAAAGGCCATCCTTTCGGATGGCCTTTCGCTTGATTTGATGTCTGGCAGTTTATGGCGGGCGT‑CCTGCCCGCCCCCCTCCCGGCCGCTGCTTCGCAACGTTCa                                                                                                                                                                                             >  1:318799/1‑249 (MQ=255)                                                                 gCTGACCGGGTAATTTTTATGGATCGTGGGGAAATAGTGGAGCAAGCTGCACCTGATGAATTTTTTGCGCATCCTAAATCAGAGCGTACGAGGGCATTTTTATCGCAGGTAATCCATTAATTGAATGTTAGTTCGAAAAGCAAAAAGGCCATCCTTTCGGATGGCCTTTCGCTTGATTTGATGTCTGGCAGTTTATGGCGGGCGT‑CCGGCCCGCCACCCTCCGGGCCGTTGCTTCGCAACGTTCAAATcc                                                                                                                                                                                        <  2:171769/250‑1 (MQ=255)                                                                          gTAATTTTTATGGATCGTGGGGAAATAGTGGAGCAAGCTGCACCTGATGAATTTTTTGCGCATCCTAAATCAGAGCGTACGAGGGCATTTTTATCGCAGGTAATCCATTAATTGAATGTTAGTTCGAAAAGCAAAAAGGCCATCCTTTCGGATGGCCTTTCGCTTGATTTGATGTCTGGCAGTTTATGGCGGGCGT‑CCTGCCCGCCACCCTCCGGGCCGTTGCTTCGCAACGTTCAAATCCGCTCCcggc                                                                                                                                                                               <  1:436858/250‑1 (MQ=255)                                                                                  tATGGATCGTGGGGAAATAGTGGAGCAAGCTGCACCTGATGAATTTTTTGCGCATCCTAAATCAGAGCGTACGAGGGCATTTTTATCGCAGGTAATCCATTAATTGAATGTTAGTTCGAAAAGCAAAAAGGCCATCCTTTCGGATGGCCTTTCGCTTGATTTGATGTCTGGCAGTTTATGGCGGGCGT‑CCTGCCCGCCACCCTCCGGGCCGTTGCTTCGCAACGTTCAAATCCGCTCCCGGCGGATTTg                                                                                                                                                                        <  2:332269/249‑1 (MQ=255)                                                                                        tCGTGGGGAAATAGTGGAGCAAGCTGCACCTGATGAATTTTTTGCGCATCCTAAATCAGAGCGTACGAGGGCATTTTTATCGCAGGTAATACATTAATTGAATGTTAGTTCGAAAAGCAAAAAGGCCATCCTTTCGGATGGCCTTTCGCTTGATTTGATGTCTGGCAGTTTATGGCGGGCGT‑CCTGCCCGCCACCCTCCGGGCCGTTGCTTCGCAACGTTCAAATCCGCTCCCGGCGGATTTGTCCTACt                                                                                                                                                                 <  2:82709/250‑1 (MQ=255)                                                                                               gAAATAGTGGAGCAAGCTGCACCTGATGAATTTTTTGCGCATCCTAAATCAGAGCGTACGAGGGCATTTTTATCGCAGGTAATCCATTAATTGAATGTTAGTTCGAAAAGCAAAAAGGCCATCCTTTCGGATGGCCTTTCGCTTGATTTGATGTCTGGCAGTTTATGGCGGGCGT‑CCTGCCCGCCACCCTCCGGGCCGTTGCTTCGCAACGTTCAAATCCGCTCCCGGCGGATTTGTCCTACTCGGgaga                                                                                                                                                          <  2:122796/250‑1 (MQ=255)                                                                                                aaaTAGTGTGGCAAGCTGCACCTTATGAATTTTTTGCGCATCCTAAATCAGAGTGTACGAGGGCATTTTTATCGCAGGTAATCCATTAATTGAATGTTAGTTCGAAAAGCAAAAAGGCCATCCTTTCGGATGGCCTTTCGCTTGATTTGATGTCTGGCAGTTTATGGCGGGCGT‑CCTCCCCGCCACCCTCCGGGCCGTTGCTTCGCAACGTTCAAATCCGCTCCCGGCGGATTTGACCTACTCGGGagag                                                                                                                                                         <  2:24946/250‑1 (MQ=255)                                                                                                     gTGGAGCAAGCTGCGCCTGATGAATTTTTTGCGCATCCTAAATCAGAGCGTACGAGGGCATTTTTATCGCAGGTAATCCATTAATTGAATGTTAGTTCGAAAAGCAAAAAGGCCATCCTTTCGGATGGCCTTTCGCTTGATTTGATGTCTGGCAGTTTATGGCGGGCGT‑CCTGCCCGCCACCCTCCGGGCCGTTGCTTCGCAACGTTCAAATCCGCTCCCGGCGGATTTGTCCTACTCGGGAGAGTGTTc                                                                                                                                                    <  2:637034/250‑1 (MQ=255)                                                                                                                  cACCTGATGAATTTTTTGCGCATCCTAAATCAGAGCGTACGAGGGCATTTTTATCGCAGGTAATCCATTAATTGAATGTTAGTTCGAAAAGCAAAAAGGCCATCCTTTCGGATGGCCTTTCGCTTGATTTGATGTCTGGCAGTTTATGGCGGGCGT‑CCTGCCCGCCACCCTCCGGGCCGTTGCTTCGCAACGTTCAAATCCGCTCCCGGCGGATTTGTCCTACTCGGGAGAGTGTTCACCGA‑CAaacaac                                                                                                                                      <  1:186067/250‑1 (MQ=255)                                                                                                                        atgaATTTTTTGCGCATCCTAAATCAGAGCGTACGAGGGCA‑TTTTATCGCAGGTAATCCATTAATTGAATGTTAGTTCGAAAAGCAAAAAGGCCATCCTTTCGGATGGCCTTTCGCTTGATTTGATGTCTGGCAGTTTATGGCGGGCGT‑CCTGCCCGCCACCCTCCGGGCCGTTGCTTCGCAACGTTCAAATCCGCTCCCGGCGGATTTGTCCTACTCGGGAGAGTGTTCACCGA‑CAAACAACAGATaaa                                                                                                                               <  1:361126/250‑1 (MQ=255)                                                                                                                                  tGCGCATCCTAAATCAGAGCGTACGAGGGCATTTTTATCGCAGGTAATCCATTAATTGAATGTTAGTTCGAAAAGCAAAAAGGCCATCCTTTCGGATGGCCTTTCGCTTGATTTGATGTCTGGCAGTTTATGGCGGGCGT‑CCTGCCCGCCACCCTCCGGGCCGTTGCTTCGCAACGTTCAAATCCGCTCCCGGCGGATTTGTCCTACTCGGGAGAGTGTTCACCGA‑CAAACAACAGATAAAACAAAAgg                                                                                                                       <  2:357811/249‑1 (MQ=255)                                                                                                                                                  gagCGTACGAGGGCATTTTTATCGCAGGTAATCCATTAATTGAATGTTAGTTCGAAAAGCAAAAAGGCCATCCTTTCGGATGGCCTTTCGCTTGATTTGATGTCTGGCAGTTTATGGCGGGCGT‑CCTGCCCGCCACCCTCCGGGCCGTTGCTTCGCAACGTTCAAATCCGCTCCCGGCGGATTTGTCCTACTCGGGAGAGTGTTCACCGA‑CAAACAACAGATAAAACAAAAGGCCCAGTCTTCCGACTGa                                                                                                      <  1:524545/250‑1 (MQ=255)                                                                                                                                                              gCATTTTTATCGCAGGTAATCCATTAATTGAATGTTAGTTCGAAAAGCAAAAAGGCCATCCTTTCGGATGGCCTTTCGCTTGATTTGATGTCTGGCAGTTTATGGCGGGCGT‑CCTGCCCGCCACCCTCCGGGCCGTTGCTTCGCAACGTTCAAATCCGCTCCCGGCGGATTTGTCCTACTCGGGAGAGTGTTCACCGA‑CAAACAACAGATAAAACAAAAGGCCCAGTCTTCCGACTGAGCCTTTTGtttt                                                                                          <  1:437322/250‑1 (MQ=255)                                                                                                                                                              gCATTTTTATCGCAGGTAATCCATTAATTGAATGTTAGTTCGAAAAGCAAAAAGGCCATCCTTTCGGATGGCCTTTCGCTTGATTTGATGTCTGGCAGTTTATGGCGGGCGT‑CCTGCCCGCCACCCTCCGGGCCGTTGCTTCGCAACGTTCAAATCCGCTCCCGGCGGATTTGTCCTACTCGGGAGAGTGTTCACCGA‑CAAACAACAGATAAAACAAAAGGCCCAGTCTTCCGACTGAGCCTTTTGtttt                                                                                          <  2:436656/250‑1 (MQ=255)                                                                                                                                                                    ttATCGCAGGTAATCCATTAATTGAATGTTAGTTCGAAAAGCAAAAAGGCCATCCTTTCGGATGGCCTTTCGCTTGATTTGATGTCTGGCAGTTTATGGCGGGCGT‑CCTGCCCGCCACCCTCCGGGCCGTTGCTTCGCAACGTTCAAATCCGCTCCCGGCGGATTTGTCCTACTCGGGAGAGTGTTCACCGA‑CAAACAACAGATAAAACAAAAGGCCCAGTCTTCCGACTGAGCCTTTTGTTTTATTTg                                                                                     <  1:619313/249‑1 (MQ=255)                                                                                                                                                                          cAGGTAATCCATTAATTGAATGTTAGTTCGAAAAGCAAAAAGGCCATCCTTTCGGATGGCCTTTCGCTTGATTTGATGTCTGGCAGTTTATGGCGGGCGTCCCTCCCCCCCCCCCCCCGGGCCGTT‑CTTCTCAACCGTTAAAACCGCCCCCCGCGGGATTGTTCTTCCCCGGGGGGGGTTTTCCCACCCAAAAACAACAAAAAAAAAAACACCAGCCTTCCAACTGACCCTtttttttttttttttgttt                                                                               >  2:608850/1‑243 (MQ=255)                                                                                                                                                                              tAATCCATTAATTGAATGTTAGTTCGAAAAGCAAAAAGGCCATCCTTTCGGATGGCCTTTCGCTTGATTTGATGTCTGGCAGTTTATGGCGGGCGG‑CCTGCCCCCCCCCCCCCCGGCCGTTGCTTCGCCACGTTTAAATTCGCCCCCCGCGGGTTTTTTCTTCTCCTGGGAGGGTTTACCGC‑CAAACAACAGATAAAAAAAAAAACCCCAGCTTCCGACCTAGCCTtttttttttttttttttttgtcgg                                                                          >  2:189625/1‑238 (MQ=255)                                                                                                                                                                                             aTGTTAGTTCGAAAAGCAAAAAGGCCATCCTTTCGGATGGCCTTTCGCTTGATTTGATGTCTGGCAGTTTATGGCGGGCGT‑CCTGCCCGCCACCCTCCGGGCCGTTGCTTCGCAACGTTCAAATCCGCTCCCGGCGGATTTGTCCTACTCGGGAGAGTGTTCACCGA‑CAAACAACAGATAAAACAAAAGGCCCAGTCTTCCGACTGAGCCTTTTGTTTTATTTGATG‑TCTGGCAGTTCCCTACTCTCGCa                                                          <  1:361472/250‑1 (MQ=255)                                                                                                                                                                                             aTGTTAGTTCGAAAAGCAAAAAGGCCATCCTTTCGGATGGCCTTTCGCTTGATTTGATGTCTGGCAGTTTATGGCGGGCGT‑CCTGCCCGCCACCCTCCGGGCCGTTGCTTCGCAACGTTCAAATCCGCTCCCGGCGGATTTGTCCTACTCGGGAGAGTGTTCACCGA‑CAAACAACAGATAAAACAAAAGGCCCAGTCTTCCGACTGAGCCTTTTGTTTTATTTGATG‑TCTGGCAGTTCCCTACTCTCGCa                                                          <  2:325619/250‑1 (MQ=255)                                                                                                                                                                                                  aGTTCGAAAAGCAAAAAGGCCATCCTTTCGGATGGCCTTTCGCTTGATTTGATGTCTGGCAGTTTATGGCGGGCGT‑CCTGCCCGCCACCCTCCGGGCCGTTGCTTCGCAACGTTCAAATCCGCTCCCGGCGGATTTGTCCTACTCGGGAGAGTGTTCACCGA‑CAAACAACAGATAAAACAAAAGGCCCAGTCTTCCGACTGAGCCTTTTGTTTTATTTGATG‑TCTGGCAGTTCCCTACTCTCGCATggg                                                      <  2:188566/249‑1 (MQ=255)                                                                                                                                                                                                            gCAAAAAGGCCATCCTTTCGGATGGCCTTTCGCTTGATTTGATGTCTGGCAGTTTATGGCGGGCGT‑CCTGCCCGCCACCCTCCGGGCCGTTGCTTCGCAACGTTCAAATCCGCTCCCGGCGGATTTGTCCTACTCGGGAGAGTGTTCACCGA‑CAAACAACAGATAAAACAAAAGGCCCAGTCTTCCGACTGAGCCTTTTGTTTTATTTGATG‑TCTGGCAGTTCCCTACTCTCGCATGGGGAGACCCcaca                                           <  1:189117/250‑1 (MQ=255)                                                                                                                                                                                                            gCAAAAAGGCCATCCTTTCGGATGGCCTTTCGCTTGATTTGATGTCTGGCAGTTTATGGCGGGCGT‑CCTGCCCGCCACCCTCCGGGCCGTTGCTTCGCAACGTTCAAATCCGCTCCCGGCGGATTTGTCCTACTCGGGAGAGTGTTCACCGA‑CAAACAACAGATAAAACAAAAGGCCCAGTCTTCCGACTGAGCCTTTTGTTTTATTTGATG‑TCTGGCAGTTCCCTACTCTCGCATGGGGAGACCCcaca                                           <  2:304114/250‑1 (MQ=255)                                                                                                                                                                                                              aaaaaGGCCATCCTTTCGGATGGCCTTTCGCTTGATTTGATGTCTGGCAGTTTATGGCGGGCGT‑CCCGCCCCCCCCCCCCCCGGCCGGTGCTTTGCAACCGTTAAATCCGCCCCCCGCGGGGTTGTTCTACCCCGGAGAGGGGTTACCGA‑CAAACAAAAGAAAAAAAAAAAAACCCAGTCCTCCGGCTGAGCCCTTTTTTTTTTTTTTTGTTTTGGCGGTT‑CCTTCCCTCGCCTgggggggacccccccc                                         >  2:272458/1‑238 (MQ=255)                                                                                                                                                                                                                 aaGGCCATCCTTTCGGATGGTCTTTCGCTTGATTTGATGTCTGGCAGTTTATGGCGGGCGG‑CCTGCCCCCCCCCCCCCCGGCCCCTGCTTTCCCACGCTCAAATCCCCTCCCCCCGGGGTTGTCCTTCTCGGGGGAGTGTTTTCCGC‑CAAACAACAAATAAAACAAAAAACCCAGACCTCCCACTGAGCCTTTTTTTTTTTTTTTTG‑TTTTGCCGTTTCCTACTCTCCCCTGGGGGGGccccccccacac                                      >  2:187962/1‑242 (MQ=255)                                                                                                                                                                                                                 aaGGCCATCCTTTCGGATGGCCTTTCGCTGGATTTGATGTGTGGCAGTTTATGGCGGGCGT‑CCGGCCCGCCACCCTCCGGGCCGTTGCTTCGCAACGTTCAAATCCGCTCCCGGCGGATTTGTCCTACTCGGGAGAGTGTTCACCGA‑CAAACAACAGATAAAACAAAAGGCCCAGTCTTCCGACTGAGCCTTTTGTTTTATTTGATG‑TCTGGCAGTTCCCTACTCTCGCATGGGGAGACCCCACACTAcc                                      <  2:631123/250‑1 (MQ=255)                                                                                                                                                                                                                     ccATCCTTTCGGATGGCCTTTCGCTTGATTTGAGGTCTGGCAGTTTAGGGCGGGCGT‑CCTGCCCGCCACCCTCCGGGCCGTTGCTTCGCAACGTTCAAATCCGCTCCCGGCGGATTTGTCCTACTCGGGAGAGTGTTCACCGA‑CAAACAACAGATAAAACAAAAGGCCCAGTCTTCCGACTGAGCCTTTTGTTTTATTTGATG‑TCTGGCAGTTCCCTACTCTCGCATGGGGAGACCCCACACTACCATCg                                  <  2:206925/250‑1 (MQ=255)                                                                                                                                                                                                                          atttCGGAGGGGCTTGTGCTTGATTTGATGTCGGGCAGTTTGTGGCGGGCGT‑CCTGCCCGGCGCCCGCCGGGCCGTTGCTTCGCAACGTTCAAATCCGCTCCCGGCGGATTTGTCCTACTCGGGAGAGTGTTCACCGA‑CAAACAACAGATAAAACAAAAGGCGCAGTCTTCCGACTGAGCCTTGTGTTTTATTTGATG‑TCTGGCAGTTCCCTACTCTCGCATGGGGAGACCCCACACTACCATCGGCGCt                             <  2:746204/249‑1 (MQ=14)                                                                                                                                                                                                                              cGGATGGCCTTTCGCTTGATTTGATGTCTGGCAGTTTATGGCGGGCGT‑CCTGCCCGCCACCCTCCGGGCCGTTGCTTCGCAACGTTCAAATCCGCTCCCGGCGGATTTGTCCTACTCGGGAGAGTGTTCACCGA‑CAAACAACAGATAAAACAAAAGGCCCAGTCTTCCGACTGAGCCTTTTGTTTTATTTGATG‑TCTGGCAGTTCCCTACTCTCGCATGGGGAGACCCCACACTACCATCGGCGCTACg                          <  1:547779/249‑1 (MQ=255)                                                                                                                                                                                                                                    gCCTTGCGCTTGATTTGATGTCGGCCGTTTTAGGGCGGGCGG‑CCTGCCCGCCGCCCTCCGGGCCGTTGCTTCGCAACGTTCAAATCCGCTCCCGGCGGATTTGTCCTACTCGGGAGAGTGTTCACCGA‑CAAACAACAGATAAAACAAAAGGCCCAGTCTTCCGACTGAGCCTTTTGTTTTATTTGATG‑TCTGGCAGTTCCCTACTCTCGCATGGGGAGACCCCACACTACCATCGGCGCTACGGCGTTTc                   <  2:377848/250‑1 (MQ=255)                                                                                                                                                                                                                                                    gatGTCTGGCAGTTTATGGCGGGCGT‑CCTGCCCGCCACCCTCCGGGCCGTTGCTTCGCAACGTTCAAATCCGCTCCCGGCGGATTTGTCCTACTCGGGAGAGTGTTCACCGA‑CAAACAACAGATAAAACAAAAGGCCCAGTCTTCCGACTGAGCCTTTTGTTTTATTTGATG‑TCTGGCAGTTCCCTACTCTCGCATGGGGAGACCCCACACTACCATCGGCGCTACGGCGTTTCACTTCTGAGTTCGGc    <  1:19367/249‑1 (MQ=39)                                                                                                                                                                                                                                                     atGTCTGGCAGTTTATGGCGGGCGT‑CCTGCCCGCCACCCTCCGGGCCGTTGCTTCGCAACGTTCAAATCCGCTCCCGGCGGATTTGTCCTACTCGGGAGAGTGTTCACCGA‑CAAACAACAGATAAAACAAAAGGCCCAGTCTTCCGACTGAGCCTTTTGTTTTATTTGATG‑TCTGGCAGTTCCCTACTCTCGCATGGGGAGACCCCACACTACCATCGGCGCTACGGCGTTTCACTTCTGAGTTCGGCAt  <  2:691757/250‑1 (MQ=39)                                                                                                                                                                                                                                                         |                                                                                                                                                                                                                                                         GCTGGCGCAGTCGGGTATGACAATGTTGTGTGTAACACATGAGATGGGGTTTGCACGAACCGTCGCTGACCGGGTAATTTTTATGGATCGTGGGGAAATAGTGGAGCAAGCTGCACCTGATGAATTTTTTGCGCATCCTAAATCAGAGCGTACGAGGGCATTTTTATCGCAGGTAATCCATTAATTGAATGTTAGTTCGAAAAGCAAAAAGGCCATCCTTTCGGATGGCCTTTCGCTTGATTTGATGTCTGGCAGTTTATGGCGGGCGT‑CCTGCCCGCCACCCTCCGGGCCGTTGCTTCGCAACGTTCAAATCCGCTCCCGGCGGATTTGTCCTACTCGGGAGAGTGTTCACCGA‑CAAACAACAGATAAAACAAAAGGCCCAGTCTTCCGACTGAGCCTTTTGTTTTATTTGATG‑TCTGGCAGTTCCCTACTCTCGCATGGGGAGACCCCACACTACCATCGGCGCTACGGCGTTTCACTTCTGAGTTCGGCAT  >  NZ_CP009273/3416370‑3416863

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.