| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NZ_CP009273 | 1,322,722 | 0 | T | G | 35.7% | 151.2 / 10.2 | 70 | T216T (ACA→ACC) | yciK | YciK family oxidoreductase |
| Reads supporting (aligned to +/- strand): ref base T (10/35); new base G (25/0); total (35/35) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 5.69e-11 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
| Rejected as consensus: Frequency below/above cutoff threshold. | |||||||||||
CCAAATGCCGCGGTGGTTTTGCCTTTTCCATTGCCGGTAAAGACGATGATAATACCGCGTTCATCCTGGGCCTGGGCCACACGAGCATCTACTTTTTCTTTCACTCGCTGCTGACGCTGTTGGTAGCGTTCATCACTCATTGGGAAATTCCTGGTTTACGGCCCGGTTGGGCGTCAAAGGTCATGCCGGTTTTACGGCGGCTGTCATCGCCCATCAGCCAGAGGTAGAGCGGCATGATATCAGC‑GGGTGTTTTAAGTTTCTGTGGATC‑TTCGGTCGGGAAGGCGCTGGCACGCATTGCGGTGCGCGTACCGCCTGGGTTAATGCAGTTGACACGCAGGCGCTGCT‑GATATTCATCGGCCAGTACCTGCATCA‑TCCCTTCGGTGGCAAATTTCGACGCTGCATATGCACCCCAGTTGGCTCGTCCCTGACGTCCAACGCTTGATGAAGTAAAGACCAGTGAACCGGCGTCCGATTTGAGTAATAAAGGAAGCAGTGCC > NZ_CP009273/1322475‑1322971 | ccAAATGCCGCGGTGGTTTTGCCTTTTCCATTGCCGGTAAAGACGATGATAATACCGCGTTCATCCTGGGCCTGGGCCACACGAGCATCTACTTTTTCTTTCACTCGCTGCTGACGCTGTTGGTAGCGTTCATCACTCATTGGGAAATTCCTGGTTTACGGCCCGGTTGGGCGTCAAAGGTCATGCCGGTTTTACGGCGGCTGTCATCGCCCATCAGCCAGAGGTAGAGCGGCATGATATCAGC‑GGgtg < 1:179058/249‑1 (MQ=255) gcgGTGGTTTTGCCTTTTCCATTGCCGGTAAAGACGATGATAATACCGCGTTCATCCTGGGCCTGGGCCACACGAGCATCTACTTTTTCTTTCACTCGCTGCTGACGCTGTTGGTAGCGTTCATCACTCATTGGGAAATTCCTGGTTTACGGCCCGGTTGGGCGTCAAAGGTCATGCCGGTTTTACGGCGGCTGTCATCGCCCATCAGCCAGAGGTAGAGCGGCATGATATCAGC‑GGGGGGTTTTAGttt > 1:79264/1‑250 (MQ=255) tggtTTTGCCTTTTCCATTGCCGGTAAAGACGATGATAATACCGCGTTCATCCTGGGCCTGGGCCACACGAGCATCTACTTTTTCTTTCACTCGCTGCTGACGCTGTTGGTAGCGTTCATCACTCATTGGGAAATTCCTGGTTTACGGCCCGGTTGGGCGTCAAAGGTCATGCCGGTTTTACGGCGGCTGTCATCGCCCATCAGCCAGAGGTAGAGCGGCATGATATCAGC‑GGGTGTTTTAAGTTTCtgt < 2:698858/250‑1 (MQ=255) gtTTTGCCTTTTCCATTGCCGGTAAAGACGATGATAATACCGCGTTCATCCTGGGCCTGGGCCACACGAGCATCTACTTTTTCTTTCACTCGCTGCTGACGCTGTTGGTAGCGTTCATCACTCATTGGGAAATTCCTGGTTTACGGCCCGGTTGGGCGTCAAAGGTCATGCCGGTTTTACGGCGGCTGTCATCGCCCATCAGCCAGAGGTAGAGCGGCATGATATCAGC‑GGGTGTTTTAAGTTTCtgtg < 2:677174/249‑1 (MQ=255) gCCTTTTCCATTGCCGGTAAAGACGATGATAATACCGCGTTCATCCTGGGCCTGGGCCACACGAGCATCTACTTTTTCTTTCACTCGCTGCTGACGCTGTTGGTAGCGTTCATCACTCATTGGGAAATTCCTGGTTTACGGCCCGGTTGGGCGTCAAAGGTCATGCCGGTTTTACGGCGGCTGTCATCGCCCATCAGCCAGAGGTAGAGCGGCATGATATCAGC‑GGGTGTTTTAAGTTTCTGTGGATC‑t < 1:462658/249‑1 (MQ=255) gCCTTTTCCATTGCCGGTAAAGACGATGATAATACCGCGTTCATCCTGGGCCTGGGCCACACGAGCATCTACTTTTTCTTTCACTCGCTGCTGACGCTGTTGGTAGCGTTCATCACTCATTGGGAAATTCCTGGTTTACGGCCCGGTTGGGCGTCAAAGGTCATGCCGGTTTTACGGCGGCTGTCATCGCCCATCAGCCAGAGGTAGAGCGGCATGATATCAGC‑GGGTGTTTTAAGTTTCTGTGGATC‑t < 1:394563/249‑1 (MQ=255) ttCCATTGCCGGTAAAGACGATGATAATACCGCGTTCATCCTGGGCCTGGGCCACACGAGCATCTACTTTTTCTTTCACTCGCTGCTGACGCTGTTGGTAGCGTTCATCACTCATTGGGAAATTCCTGGTTTACGGCCCGGTTGGGCGTCAAAGGTCATGCCGGTTTTACGGCGGCTGTCATCGCCCATCAGCCAGAGGTAGAGCGGCATGATATCAGC‑GGGTGTTTTAAGTTTCTGTGGATC‑Ttcggt < 2:789153/249‑1 (MQ=255) ttCCATTGCCGGTAAAGACGATGATAATACCGCGTTCATCCTGGGCCTGGGCCACACGAGCATCTACTTTTTCTTTCACTCGCTGCTGACGCTGTTGGTAGCGTTCATCACTCATTGGGAAATTCCTGGTTTACGGCCCGGTTGGGCGTCAAAGGTCATGCCGGTTTTACGGCGGCTGTCATCGCCCATCAGCCAGAGGTAGAGCGGCATGATATCAGC‑GGGTGTTTTAAGTTTCTGTGGATC‑Ttcgg < 2:177086/248‑1 (MQ=255) ttGCCGGTAAAGACGATGATAATACCGCGTTCATCCTGGGCCTGGGCCACACGAGCATCTACTTTTTCTTTCACTCGCTGCTGACGCTGTTGGTAGCGTTCATCACTCATTGGGAAATTCCTGGTTTACGGCCCGGTTGGGCGTCAAAGGTCATGCCGGTTTTACGGCGGCTGTCATTGCCCATCAGCCAGAGGGAGAGCGGCATGATATCAGC‑GGGGGGTTTAAGTTTTTTTGGGAC‑TTTGGGCggg > 1:373588/1‑248 (MQ=255) gTAAAGACGATGATAATACCGCGTTCATCCTGGGCCTGGGCCACACGAGCATCTACTTTTTCTTTCACTCGCTGCTGACGCTGTTGGTAGCGTTCATCACTCATTGGGAAATTCCTGGTTTACGGCCCGGTTGGGCGTCAAAGGTCATGCCGGTTTTACGGCGGCTGTCATCGCCCATCAGCCAGAGGGAGAGCGGCATGATATCAGC‑GGGGGGTTTAAGTTTCTGTGGGTC‑TTCGGGCGGGGAGGTGCt > 1:309603/1‑250 (MQ=255) aaaGACGATGATAATACCGCGTTCATCCTGGGCCTGGGCCACACGAGCATCTACTTTTTCTTTCACTCGCTGCTGACGCTGTTGGTAGCGTTCATCACTCATTGGGAAATTCCTGGTTTACGGCCCGGTTGGGCGTCAAAGGTCATGCCGGTTTTACGGCGGCTGTCATCGCCCATCAGCCAGAGGTAGAGCGGCATGATATCAGC‑GGGTGTTTTAAGTTTCTGTGGATC‑TTCGGTCGGGAAGGCGCTgg > 1:191500/1‑250 (MQ=255) aaGACGATGATAATACCGCGTTCATCCTGGGCCTGGGCCACACGAGCATCTACTTTTTCTTTCACTCGCTGCTGACGCTGTTGGTAGCGTTCATCACTCATTGGGAAATTCCTGGTTTACGGCCCGGTTGGGCGTCAAAGGTCATGCCGGTTTTACGGCGGCTGTCATCGCCCATCAGCCAGAGGTAGAGCGGCATGATATCAGC‑GGGTGTTTTAAGTTTCTGTGGATC‑TTCGGTCGGGAAGGCGCTgg < 2:726026/249‑1 (MQ=255) aaGACGATGATAATACCGCGTTCATCCTGGGCCTGGGCCACACGAGCATCTACTTTTTCTTTCACTCGCTGCTGACGCTGTTGGTAGCGTTCATCACTCATTGGGAAATTCCTGGTTTACGGCCCGGTTGGGCGTCAAAGGTCATGCCGGTTTTACGGCGGCTGTCATCGCCCATCAGCCAGAGGTAGAGCGGCATGATATCAGC‑GGGTGTTTTAAGTTTCTGTGGATC‑TTCGGTCGGGAAGGCGCTGGc < 1:400415/250‑1 (MQ=255) gACGATGATAATACCGCGTTCATCCTGGGCCTGGGCCACACGAGCATCTACTTTTTCTTTCACTCGCTGCTGACGCTGTTGGTAGCGTTCATCACTCATTGGGAAATTCCTGGTTTACGGCCCGGTTGGGCGTCAAAGGTCATGCCGGTTTTACGGCGGCTGTCATCGCCCATCAGCCAGAGGTAGAGCGGCATGATATCAGC‑GGGGGTTTTTAGTTTCTGTGGGTC‑TTCGGTCGGGAAGGCGCTGGCAc > 1:324030/1‑250 (MQ=255) tgatAATACCGCGTTCATCCTGGGCCTGGGCCACACGAGCATCTACTTTTTCTTTCACTCGCTGCTGACGCTGTTGGTAGCGTTCATCACTCATTGGGAAATTCCTGGTTTACGGCCCGGTTGGGCGTCAAAGGTCATGCCGGTTTTACGGCGGCTGTTATCGCCCATCCGCCCGAGGTAGAGCGGCATGGTATCCGC‑GGGGGGTTTTAGTTTTTGGGGGGCGTTCGGTGGGGAGGGGGCTGGCAccagt > 2:92818/1‑246 (MQ=255) taataCCGCTTTCATCCTGGGCCTGGGCCACACGAGCATCTACTTTTTCTTTCACTCGCTGCTGACGCTGTTGGTAGCGTTCATCACTCATTGGGAAATTCCTGGTTTACGGCCCGGTTGGGCGTCAAAGGTCATGCCGGTTTTACGGCGGCTGTCATCGCCCATCAGCCAGAGGTAGAGCGGCATGATATCAGC‑GGGTGTTTTAAGTTTCTGTGGATC‑TTCGGTCGGGAAGGCGCTGGCACGCATTGCg < 2:451805/250‑1 (MQ=255) aataCCGCGTTCATCCTGGGCCTGGGCCACACGAGCATCTACTTTTTCTTTCACTCGCTGCTGACGCTGTTGGTAGCGTTCATCACTCATTGGGAAATTCCTGGTTTACGGCCCGGTTGGGCGTCAAAGGTCATGCCGGTTTTACGGCGGCTGTCATCGCCCATCAGCCAGAGGTAGAGCGGCATGATATCAGC‑GGGGGGTTTTAGTTTTTGTGGGTC‑TTCGGGCGGGGAGGGGGTGGGACGCCTTGCgg > 1:312917/1‑250 (MQ=255) attacgcgTTCATCCTGGGCCTGGGCCACACGAGCATCTACTTTTTCCTTCACTCGCTGCTGACGCTGTTGGTAGCGTTCATCACTCATTGGGAAATTCCTGGTTTACGGCCCGGTTGGGCGTCAAGGGTCATGCCGGTTTTACGGCGGCTGTCATCGCCCATCAGCCAGAGGTAGAGCGGCATGATATCAGC‑GGGTGTTTTAAGTTTCTGTGGATC‑TTCGGTCGGGAAGGCGCTGGCACGCATTGcag < 2:455058/245‑3 (MQ=255) cgcgTTCATCCTGGGCCTGGGCCACACGAGCATCTACTTTTTCTTTCACTCGCTGCTGACGCTGTTGGTAGCGTTCATCACTCATTGGGAAATTCCTGGTTTACGGCCCGGTTGGGCGTCAAAGGTCATGCCGGTTTTACGGCGGCTGTCATCGCCCATCAGCCAGAGGTAGAGCGGCATGATATCAGC‑GGGGGGTTTTAGTTTCTGTGGGTC‑TTCGGGCGGGGAGGGGCGGGCACGCATTGCGGGgcgg > 1:493256/1‑249 (MQ=255) ctgggcctgggcCACACGAGCATCTACTTTTTCTTTCACTCGCTGCTGACGCTGTTGGTAGCGTTCATCACTCATTGGGAAATTCCTGGTTTACGGCCCGGTTGGGCGTCAAAGGTCATGCCGGTTTTACGGCGGCTGTCATCGCCCATCAGCCAGAGGTAGAGCGGCATGATATCAGC‑GGGTGTTTTAAGTTTCTGTGGATC‑TTCGGTCGGGAAGGCGCTGGCACGCATTGCGGTGCGCGTACCGCCt < 1:293915/249‑1 (MQ=255) cctgggccACACGAGCATCTACTTTTTCTTTCACTCGCTGCTGACGCTGTTGGTAGCGTTCATCACTCATTGGGAAATTCCTGGTTTACGGCCCGGTTGGGCGTCAAAGGTCATGCCGGTTTTACGGCGGCTGTCATCGCCCCTCAGCCCGAGGGAGAGCGGCATGGTATCAGCGGGGGGTTTTAAG‑TTCTGTGGGTC‑TTTGGGCGGGGAGGCGGGGGCACGCATTTCGGGGCGCGGTCCGCCCggggg > 2:137334/1‑247 (MQ=255) cctgggccACACGAGCATCTACTTTTTCTTTCACTCGCTGCTGACGCTGTTGGTAGCGTTCATCACTCATTGGGAAATTCCTGGTTTACGGCCCGGTTGGGCGTCAAAGGTCATGCCGGTTTTACGGCGGCTGTCATCGCCCATCAGCCAGAGGTAGAGCGGCATGATATCAGC‑GGGGGGTTTTAGGTTTTGTGGGTC‑TTCGGGCGGGGAGGCGCTGGCACGCATTGCGGTGCGCGGACCGCCTggggt > 1:714698/1‑247 (MQ=255) ctgggccACACGAGCATCTACTTTTTCTTTCACTCGCTGCTGACGCTGTTGGTAGCGTTCATCACTCATTGGGAAATTCCTGGTTTACGGCCCGGTTGGGCGTCAAAGGTCATGCCGGTTTTACGGCGGCTGTCATCCCCCCTCACCCAGGGGTAGCGCCGCCTGATATCTGC‑GGGGGTTTTTAGTTTCTTTTGGGC‑TTTCGGCGGGGAGGCGCTCGGGCGCCTTTCGGGGCGCGGCCCGCCCggggt > 2:220905/1‑246 (MQ=255) acGAGCATCTACTTTTTCTTTCACTCGCTGCTGACGCTGTTGGTAGCGTTCATCACTCATTGGGAAATTCCTGGTTTACGGCCCGGTTGGGCGTCAAAGGTCATGCCGGTTTTACGGCGGCTGTCATCGCCCCTCCGCCAGAGGTAGAGCGGCATGGTATCAGCGGGGGGTTTTAAGTTTTGGTGG‑TC‑TTACGTCGGGGAGGAGGTGGGCCGCCTTGGGGGGGGCGGACCCGCTGGGGTCATGCAggtt > 2:416087/1‑246 (MQ=255) cGAGCATCTACTTTTTCTTTCACTCGCTGCTGACGCTGTTGGTAGCGTTCATCACTCATTGGGAAATTCCTGGTTTACGGCCCGGTTGGGCGTCAAAGGTCATGCCGGTTTTACGGCGGCTGTCATCGCCCATCAGCCAGAGGTAGAGCGGCATGATATCAGC‑GGGTGTTTTAAGTTTCTGTGGATC‑TTCGGTCGGGAAGGCGCTGGCACGCATTGCGGTGCGCGTACCGCCTGGGTTAATGCAGTTGac < 1:30584/250‑1 (MQ=255) gAGCATCTACTTTTTCTTTCACTCGCTGCTGACGCTGTTGGTAGCGTTCATCACTCATTGGGAAATTCCTGGTTTACGGCCCGGTTGGGCGTCAAAGGTCATGCCGGTTTTACGGCGGCTGTCATCGCCCCTCAGCCAGAGGTAGAGCGGCATGGTATCAGC‑GGGGGTTTTTAGTTTTTGTGGGTC‑TTTGGGCGGGGAGGGGCTGGGACGCATTGCGGGGCGCGGTCCGCCCGGGTTAATGGAGTTGaca > 1:266470/1‑250 (MQ=255) tttttCTTTCACTCGCTGCTGACGCTGTTGGTAGCGTTCATCACTCATTGGGAAATTCCTGGTTTACGGCCCGGTTGGGCGTCAAAGGTCATGCCGGTTTTACGGCGGCTGTCATCGCCCATCAGCCAGAGGTAGAGCGGCATGATATCAGC‑GGGGGTTTTTAGTTTCTTTGGGTC‑TTCGGGCGGGGAGGCGCGGGCACGCACTGCGGGGCGCGTACCGCCTGGGGTTATGCCGTTGGCACGCAGgcgcg > 2:324005/1‑249 (MQ=255) ttttCTTTCACTCGCTGCTGACGCTGTTGGTAGCGTTCATCACTCATTGGGAAATTCCTGGTTTACGGCCCGGTTGGGCGTCAAAGGTCATGCCGGTTTTACGGCGGCTGTCATCGCCCATCAGCCAGAGGGAGAGCGGCATGATATCAGC‑GGGGGGTTTTAGGTTTTGTGGGTC‑TTTGGGCGGGGAGGGGCTGGGGCGCATTGCGGGGCGCGGACCGCCCGGGGGAAAGCAGATTGCACGCCGgggccg > 2:669270/1‑248 (MQ=255) tttctttcACTCGCTGCTGACGCTGTTGGTAGCGTTCATCACTCATTGGGAAATTCCTGGTTTACGGCCCGGTTGGGCGTCAAAGGTCATGCCGGTTTTACGGCGGCTGTCATCGCCCATCAGCCAGAGGTAGAGCGGCATGATATCAGC‑GGGGGTTTTTAGTTTCTGTGGATC‑TTCGGTCGGGAAGGCGCTGGCACGCATTGCGGTGCGCGTACCGCCTGGGGTAATGCAGGTGACACGCAGGCgctgc > 1:768970/1‑250 (MQ=255) ctttcACTCGCTGCTGACGCTGTTGGTAGCGTTCATCACTCATTGGGAAATTCCTGGTTTACGGCCCGGTTGGGCGTCAAAGGTCATGCCGGTTTTACGGCGGCTGTCATCGCCCATCAGCCAGAGGTAGAGCGGCATGATATCAGC‑GGGTGTTTTAAGTTTCTGTGGATC‑TTCGGTCGGGAAGGCGCTGGCACGCATTGCGGTGCGCGTACCGCCTGGGTTAATGCAGTTGACACGCAGGCGctgct‑g < 1:28012/249‑1 (MQ=255) ttcCCTCGCTGCTGACGCTGTTGGTAGCGTTCATCACTCATTGGGAAATTCCTGGTTTACGGCCCGGTTGGGCGTCAAAGGTCATGCCGGTTTTACGGCGGCTGTCATCGCCCATCAGCCAGAGGTAGAGCGGCATGATATCAGC‑GGGTGTTTTAAGTTTCTGTGGATC‑TTCGGTCGGGAAGGCGCTGGCACGCATTGCGGTGCGCGTACCGCCTGGGTTAATGCAGTTGACACGCAGGCGCTGCT‑Gat < 2:394372/249‑1 (MQ=255) tcACTCGCTGCTGACGCTGTTGGTAGCGTTCATCACTCATTGGGAAATTCCTGGTTTACGGCCCGGTTGGGCGTCAAAGGTCATGCCGGTTTTACGGCGGCTGTCATCGCCCATCAGCCAGAGGTAGAGCGGCATGATATCAGC‑GGGTGTTTTAAGTTTCTGTGGATC‑TTCGGTCGGGAAGGCGCTGGCACGCATTGCGGTGCGCGTACCGCCTGGGTTAATGCAGTTGACACGCAGGCGCTGCT‑Gata < 1:234191/249‑1 (MQ=255) gctgctGACGCTGTTGGTAGCGTTCATCACTCATTGGGAAATTCCTGGTTTACGGCCCGGTTGGGCGTCAAAGGTCATGCCGGTTTTACGGCGGCTGTCATCGCCCATCAGCCAGAGGTAGAGCGGCATGATATCAGC‑GGGTGTTTTAAGTTTCTGTGGATC‑TTCGGTCGGGAAGGCGCTGGCACGCATTGCGGTGCGCGTACCGCCTGGGTTAATGCAGTTGACACGCAGGCGCTGCT‑GATATTCAt < 2:644625/248‑1 (MQ=255) ctgctgACGCTGTTGGTAGCGTTCATCACTCATTGGGAAATTCCTGGTTTACGGCCCGGTTGGGCGTCAAAGGTCATGCCGGTTTTACGGCGGCTGTCATCGCCCATCAGCCAGAGGTAGAGCGGCATGATATCAGC‑GGGTGTTTTAAGTTTCTGTGGATC‑TTCGGTCGGGAAGGCGCTGGCACGCATTGCGGTGCGCGTACCGCCTGGGTTAATGCAGTTGACACGCAGGCGCTGCT‑GATATTCATCgg < 1:28036/250‑1 (MQ=255) gctgACGCTGTTGGTAGCGTTCATCACTCATTGGGAAATTCCTGGTTTACGGCCCGGTTGGGCGTCAAAGGTCATGCCGGTTTTACGGCGGCTGTCATCGCCCATCAGCCAGAGGGAGAGCGGCATGATATCAGC‑GGGGGTTTTAAGTTTTTGTGGGTC‑TTCGGGCGGGGAGGCGCTGGCACGCATTGGGGGGCGCGTACCGCCTGGGGTAATGCAGGTGACACGCAGGCGCTGCT‑GGTATTTATCGGcc > 1:75676/1‑250 (MQ=255) tgACGCTGTTGGTAGCGTTCATCACTCATTGGGAAATTCCTGGTTTACGGCCCGGTTGGGCGTCAAAGGTCATGCCGGTTTTACGGCGGCTGTCCTCGCCCCTCCGCCAGAGGGAGAGGGGCCTGATATCCGG‑GGGGGTTTTTTGTTTCTGTGGGGC‑TTTGGTCGGGGAGGCGCTGGCACGGCTTTGGGGGCGGGTTACGCCTGGGGTGATGCCGGTGGCACGGAGGGCCTGCT‑GGTGTTCATCCGcccg > 2:179331/1‑248 (MQ=255) gCTGTTGGTAGCGTTCATCACTCATTGGGAAATTCCTGGTTTACGGCCCGGTTGGGCGTCAAAGGTCATGCCGGTTTTACGGCGGCTGTCATCGCCCATCAGCCAGAGGTAGAGCGGCATGATATCAGC‑GGGTGTTTTAAGTTTCTGTGGATC‑TTCGGTCGGGAAGGCGCTGGCACGCATTGCGGTGCGCGTACCGCCTGGGTTAATGCAGTTGACACGCAGGCGCTGCT‑GATATTCATCGGCCAGTAcc < 1:610181/250‑1 (MQ=255) ttGGTAGCGTTCATCACTCATTGGGAAATTCCTGGTTTACGGCCCGGTTGGGCGTCAAAGGTCATGCCGGTTTTACGGCGGCTGTCATCGCCCATCAGCCAGAGGTAGAGCGGCATGATATCAGC‑GGGGGTTTTTAGTTTCTGTGGATC‑TTCGGTCGGGGAGGCGCTGGCACGCATTGCGGTGCGCGTACCGCCTGGGTTAATGCAGTTGACACGCAGGCGCTGCT‑GATATTCATCGGCCAGTACCTGca > 1:778233/1‑250 (MQ=255) tAGCGTTCATCACTCATTGGGAAATTCCTGGTTTACGGCCCGGTTGGGCGTCAAAGGTCATGCCGGTTTTACGGCGGCTGTCATCGCCCATCAGCCAGAGGTAGAGCGGCATGATATCAGC‑GGGTGTTTTAAGTTTCTGTGGATC‑TTCGGTCGGGAAGGCGCTGGCACGCATTGCGGTGCGCGTACCGCCTGGGTTAATGCAGTTGACACGCAGGCGCTGCT‑GATATTCATCGGCCAGTACCTGcatca‑t < 2:118684/250‑1 (MQ=255) cGTTCATCACTCATTGGGAAATTCCTGGTTTACGGCCCGGTTGGGCGTCAAAGGTCATGCCGGTTTTACGGCGGCTGTCATCGCCCATCAGCCAGAGGTAGAGCGGCATGATATCAGC‑GGGTGTTTTAAGTTTCTGTGGATC‑TTCGGTCGGGAAGGCGCTGGCACGCATTGCGGTGCGCGTACCGCCTGGGTTAATGCAGTTGACACGCAGGCGCTGCT‑GATATTCATCGGCCAGTACCTGCATCA‑Tccc < 1:416003/250‑1 (MQ=255) gTTCATCACTCATTGGGAAATTCCTGGTTTACGGCCCGGTTGGGCGTCAAAGGTCATGCCGGTTTTACGGCGGCTGTCATTGCCCACCAGCCAGAGGGAGAGCGGGATGAAATCAGG‑GGGGGTTTTTTGTTTTTGTGGGTT‑TTTGGGCGGGGAGGGGGTGGCACGGATTTGGGGGGGCGTACCGCCTGGGGTAAAGCAGTTGACACGCCGGGGCTGCT‑GATATTTATCGGCCCGGAACTGCATCA‑Tcccc > 2:610428/1‑249 (MQ=255) aCTCATTGGGAAATTCCTGGTTTACGGCCCGGTTGGGCGTCAAAGGTCATGCCGGTTTTACGGCGGCTGTCATCGCCCATCAGCCAGAGGGAGAGCGGCATGATATCAGC‑GGGGGTTTTAAGTTTCTTTGGATC‑TTCGGTCGGGAAGGCGCTGGCACGCATTGCGGGGCGCGTACCGCCCGGGGTTATGCAGTTGACACGCAGGCGCTGCT‑GATATTCATCGGCCAGGACCTGCATCA‑TCCCCTCGGTgg > 1:15871/1‑250 (MQ=255) gggAAATTCCTGGTTTACGGCCCGGTTGGGCGTCAAAGGTCATGCCGGTTTTACGGCGGCTGTCATCGCCCATCAGCCAGAGGTAGAGCGGCATGATATCAGC‑GGGTGTTTTAAGTTTCTGTGGATC‑TTCGGTCGGGAAGGCGCTGGCACGCATTGCGGTGCGCGTACCGCCTGGGTTAATGCAGTTGACACGCAGGCGCTGCT‑GATATTCATCGGCCAGTACCTGCATCA‑TCCCTTCGGTGGCAAAtt < 1:83579/249‑1 (MQ=255) catgcTGGTGTGCGGCCCGGTTGGGCGTCAAAGGTCATGCCGTTTTTACGGCGGCTGTCATCGCCCATCAGCCAGAGGTAGAGCGGCATGATATCAGC‑GGGTGTTTTAAGTTTCTGTGGATC‑TTCGGTCGGGAAGGCGCTGGCGCGCATTGCGGTGCGCGTGCCGCCTGGGTTAATGCAGTTGACACGCAGGCGCTGCT‑GATATTCATCGGCCAGTACCTGCATCA‑TCCCTTCGGTGGCAAATTTCGACg < 2:328769/246‑1 (MQ=255) ttCCTGGTTTACGGCCCGGTTGGGCGTCAAAGGTCATGCCGGTTTTACGGCGGCTGTCATCGCCCATCAGCCAGAGGTAGAGCGGCATGATATCAGC‑GGGGGTTTTTAGTTTCTGTGGGTC‑TTCGGTCGGGAAGGCGCTGGCACGCATTGCGGGGCGCGTACCGCCCGGGGTAATGCAGTTGACACGCAGGCGCTGCT‑GGTATTCATCGGCCAGGACCTGCATCA‑TCCCTTCGGTGGCAAATTTCGACGc > 1:414145/1‑250 (MQ=255) gTTTACGGCCCGGTTGGGCGTCAAAGGTCATGCCGGTTTTACGGCGGCTGTCATCGCCCCTCAGCCAGAGGTAGAGCGGCCAGATATACGC‑GGGTGTTTTTAGCTTCTTTTGGTC‑TTCGGGCGGGGAAGCGCCGGTCCGCCTTTTGGGGCGCGTTACCCCTGGGTTTAAGCAAGTGAACAGCAGGCGCTGCTGGTTATTC‑TCGGCCCGGAGCTGCTTCACACCCCTCGGGGGCCAATTTCGatcagtcta > 2:623379/1‑242 (MQ=255) aCGGCCCGGTTGGGCGTCAAAGGTCATGCCGGTTTTACGGCGGCTGTCATCGCCCATCAGCCAGAGGTAGAGCGGCATGATATCAGC‑GGGTGTTTTAAGTTTCTGTGGATC‑TTCGGTCGGGAAGGCGCTGGCACGCATTGCGGTGCGCGTACCGCCTGGGTTAATGCAGTTGACACGCAGGCGCTGCT‑GATATTCATCGGCCAGTACCTGCATCA‑TCCCTTCGGTGGCAAATTTCGACGCTGCATATGc < 1:208572/249‑1 (MQ=255) gCCCGGTTGGGCGTCAAAGGTCATGCCGGTTTTACGGCGGCTGTCATCGCCCATCAGCCAGAGGTAGAGCGGCATGATATCAGC‑GGGGGTTTTAAGTTTCTGTGGATC‑TTCGGTCGGGAAGGCGCTGGCACGCATTGCGGTGCGCGTACCGCCTGGGTTAATGCAGTTGACACGCAGGCGCTGCT‑GATATTCATCGGCCAGTACCTGCATCA‑TCCCTTCGGGGGCAACTTTCGACGCTGCATATGCAccc > 1:291403/1‑250 (MQ=255) ccGGTTGGGCGTCAAAGGTCATGCCGGTTTTACGGCGGCTGTCATCGCCCATCAGCCAGAGGTAGAGCGGCATGATATCAGC‑GGGTGTTTTAAGTTTCTGTGGATC‑TTCGGTCGGGAAGGCGCTGGCACGCATTGCGGTGCGCGTACCGCCTGGGTTAATGCAGTTGACACGCAGGCGCTGCT‑GATATTCATCGGCCAGTACCTGCATCA‑TCCCTTCGGTGGCAAATTTCGACGCTGCATATGCACCCCa < 2:704745/250‑1 (MQ=255) gggCGTCAAAGGTCATGCCGGTTTTACGGCGGCTGTCATCGCCCATCAGCCAGAGGTAGAGCGGCATGATATCAGC‑GGGTGTTTTAAGTTTCTGTGGATC‑TTCGGTCGGGAAGGCGCTGGCACGCATTGCGGTGCGCGTACCGCCTGGGTTAATGCAGTTGACACGCAGGCGCTGCT‑GATATTCATCGGCCAGTACCTGCATCA‑TCCCTTCGGTGGCAAATTTCGACGCTGCATATGCACCCCAGTTgg < 1:74498/249‑1 (MQ=255) ggCGTCAAAGGTCATGCCGGTTTTACGGCGGCTGTCATCGCCCATCAGCCAGAGGTAGAGCGGCATGATATCAGC‑GGGTGTTTTAAGTTTCTGTGGATC‑TTCGGTCGGGAAGGCGCTGGCACGCATTGCGGTGCGCGTACCGCCTGGGTTAATGCAGTTGACACGCAGGCGCTGCT‑GATATTCATCGGCCAGTACCTGCATCA‑TCCCTTCGGTGGCAAATTTCGACGCTGCATATGCACCCCAGTTGGc < 1:442826/249‑1 (MQ=255) ggCGTCAAAGGTCATGCCGGTTTTACGGCGGCCGTCATCGCCCATCAGCCAGAGGTAGAGCGGCATGATATCAGC‑GGGGGTTTTAAGGTTCTGTGGATC‑TTCGGTCGGGAAAGCGACGGCACGCATTTCGGTGCGCGTAACGCCCGGGGTTATGCAGGTGACAAGCAGGCGCTGCT‑GATATTTCTCGGCCAGTACCTGCATCA‑TCCCCTCGGGGGCAAAATTCGACGCCGCCTATGCACCCCAGGTTGCt > 2:716235/1‑250 (MQ=255) aTGCCGGTTTTACGGCGGCTGTCATCGCCCATCAGCCAGAGGTAGAGCGGCATGATATCAGC‑GGGTGTTTTAAGTTTCTGTGGATC‑TTCGGTCGGGAAGGCGCTGGCACGCATTGCGGTGCGCGTACCGCCTGGGTTAATGCAGTTGACACGCAGGCGCTGCT‑GATATTCATCGGCCAGTACCTGCATCA‑TCCCTTCGGTGGCAAATTTCGACGCTGCATATGCACCCCAGTTGGCTCGTCCCTGACGt < 2:471423/249‑1 (MQ=255) gCCGGTTTTACGGCGGCTGTCATCGCCCATCAGCCAGAGGGAGAGCGGCATGATATCAGC‑GGGGGTTTTTAGTTTTTGTGGGTC‑TTCGGTCGGGAAGGCGCTGGCCCGCATTGCGGTGTGCGTAACGCCTGGGTTAATGCCGTTGACACGCAGGCGCTGCT‑GATATTCCTCGGCCAGGACCCTCAATA‑TCCCTTCGGGGGCAAAATTCGACGCCGCATATGCCACCCAGCTTGCTCGTcccctgccgtc > 2:522656/1‑241 (MQ=255) ttACGGCGGCTGTCATCGCCCATCAGCCAGAGGTAGAGCGGCATGATATCAGC‑GGGGGGTTTAAGTTTTTGTGGATC‑TTCGGTCGGGAAGGCGCTGGCACGCCTTGCGGGGCGCGTACCGCCTGGGGTAATGCAGTTGACACGCAGGCGCTGCC‑GGTATTCATCGGGCAGGACCTGCATCA‑TCCCTTCGGGGGCGAATTTCGACGGCGCCTATGCACCCCAGTTGGCTCGTCCCTGACGTCCACCGCTtg > 2:39005/1‑250 (MQ=255) tACGGCGGCTGTCATCGCCCATCAGCCAGAGGTAGAGCGGCATGATATCAGC‑GGGTGTTTTAAGTTTCTGTGGATC‑TTCGGTCGGGAAGGCGCTGGCACGCATTGCGGTGCGCGTACCGCCTGGGTTAATGCAGTTGACACGCAGGCGCTGCT‑GATATTCATCGGCCAGTACCTGCATCA‑TCCCTTCGGTGGCAAATTTCGACGCTGCATATGCACCCCAGTTGGCTCGTCCCTGACGTCCAACGCTtg < 1:710119/249‑1 (MQ=255) aCGGCGGCTGTCATCGCCCATCAGCCAGAGGTAGAGCGGCATGATATCAGC‑GGGTGTTTTAAGTTTCTGTGGATC‑TTCGGTCGGGAAGGCGCTGGCACGCATTGCGGTGCGCGTACCGCCTGGGTTAATGCAGTTGACACGCAGGCGCTGCT‑GATATTCATCGGCCAGTACCTGCATCA‑TCCCTTCGGTGGCAAATTTCGACGCTGCATATGCAACCCAGTTGGCTCGTCCCTGACGGCCAACGCTtgat > 1:700956/1‑250 (MQ=255) tGTCATCGCCCATCAGCCAGAGGTAGAGCGGCATGATATCAGC‑GGGTGTTTTAAGTTTCTGTGGATC‑TTCGGTCGGGAAGGCGCTGGCACGCATTGCGGTGCGCGTACCGCCTGGGTTAATGCAGTTGACACGCAGGCGCTGCT‑GATATTCATCGGCCAGTACCTGCATCA‑TCCCTTCGGTGGCAAATTTCGACGCTGCATATGCACCCCAGTTGGCTCGTCCCTGACGTCCAACGCTTGATGAAGTa > 1:673206/1‑248 (MQ=255) aTCGCCCATCAGCCAGAGGTAGAGCGGCATGATATCAGC‑GGGTGTTTTAAGTTTCTGTGGATC‑TTCGGTCGGGAAGGCGCTGGCACGCATTGCGGTGCGCGTACCGCCTGGGTTAATGCAGTTGACACGCAGGCGCTGCT‑GATATTCATCGGCCAGTACCTGCATCA‑TCCCTTCGGTGGCAAATTTCGACGCTGCATATGCACCCCAGTTGGCTCGTCCCTGACGTCCAACGCTTGATGAAGTAAAGAc < 2:714270/249‑1 (MQ=255) aGCCAGAGGTAGAGCGGCATGATATCAGC‑GGGTGTTTTAAGTTTCTGTGGATC‑TTCGGTCGGGAAGGCGCTGGCACGCATTGCGGTGCGCGTACCGCCTGGGTTAATGCAGTTGACACGCAGGCGCTGCT‑GATATTCATCGGCCAGTACCTGCATCA‑TCCCTTCGGTGGCAAATTTCGACGCTGCATATGCACCCCAGTTGGCTCGTCCCTGACGTCCAACGCTTGATGAAGTAAAGACCAGTGAACCgg < 1:255583/250‑1 (MQ=255) agagGTAGAGCGGCATGATATCAGC‑GGGTGTTTTAAGTTTCTGTGGATC‑TTCGGTCGGGAAGGCGCTGGCACGCATTGCGGTGCGCGTACCGCCTGGGTTAATGCAGTTGACACGCAGGCGCTGCT‑GATATTCATCGGCCAGTACCTGCATCA‑TCCCTTCGGTGGCAAATTTCGACGCTGCATATGCACCCCAGTTGGCTCGTCCCTGACGTCCAACGCTTGATGAAGTAAAGACCAGTGAACCGGCGTc < 2:266470/250‑1 (MQ=255) gagGTAGAGCGGCATGATATCAGC‑GGGTGTTTTAAGTTTCTGTGGATC‑TTCGGTCGGGAAGGCGCTGGCACGCATTGCGGTGCGCGTACCGCCTGGGTTAATGCAGTTGACACGCAGGCGCTGCT‑GATATTCATCGGCCAGTACCTGCATCA‑TCCCTTCGGTGGCAAATTTCGACGCTGCATATGCACCCCAGTTGGCTCGTCCCTGACGTCCAACGCTTGATGAAGTAAAGACCAGTGAACCGGCGTcc < 2:765561/250‑1 (MQ=255) agGTAGAGCGGCATGATATCAGC‑GGGTGTTTTAAGTTTCTGTGGATC‑TTCGGTCGGGAAGGCGCTGGCACGCATTGCGGTGCGCGTACCGCCTGGGTTAATGCAGTTGACACGCAGGCGCTGCT‑GATATTCATCGGCCAGTACCTGCATCA‑TCCCTTCGGTGGCAAATTTCGACGCTGCATATGCACCCCAGTTGGCTCGTCCCTGACGTCCAACGCTTGATGAAGTAAAGACCAGTGAACCGGCGTcc > 1:400894/1‑249 (MQ=255) agGTAGAGCGGCATGATATCAGC‑GGGTGTTTTAAGTTTCTGTGGATC‑TTCGGTCGGGAAGGCGCTGGCACGCATTGCGGTGCGCGTACCGCCTGGGTTAATGCAGTTGACACGCAGGCGCTGCT‑GATATTCATCGGCCAGTACCTGCATCA‑TCCCTTCGGTGGCAAATTTCGACGCTGCATATGCACCCCAGTTGGCTCGTCCCTGACGTCCAACGCTTGATGAAGTAAAGACCAGTGAACCGGCGTCCg < 1:399569/250‑1 (MQ=255) cGGCATGATATCAGC‑GGGTGTTTTAAGTTTCTGTGGATC‑TTCGGTCGGGAAGGCGCTGGCACGCATTGCGGTGCGCGTACCGCCTGGGTTAATGCAGTTGACACGCAGGCGCTGCT‑GATATTCATCGGCCAGTACCTGCATCA‑TCCCTTCGGTGGCAAATTTCGACGCTGCATATGCACCCCAGTTGGCTCGTCCCTGACGTCCAACGCTTGATGAAGTAAAGACCAGTGAACCGGCGTCCGATTTGAg > 1:549462/1‑249 (MQ=255) cGGCATGATATCAGC‑GGGTGTTTTAAGTTTCTGTGGATC‑TTCGGTCGGGAAGGCGCTGGCACGCATTGCGGTGCGCGTACCGCCTGGGTTAATGCAGTTGACACGCAGGCGCTGCT‑GATATTCATCGGCCAGTACCTGCATCA‑TCCCTTCGGTGGCAAATTTCGACGCTGCATATGCACCCCAGTTGGCTCGTCCCTGACGTCCAACGCTTGATGAAGTAAAGACCAGTGAACCGGCGTCCGATTTGAg > 1:621801/1‑249 (MQ=255) ggCATGATATCAGC‑GGGTGTTTTAAGTTTCTGTGGATC‑TTCGGTCGGGAAGGCGCTGGCACGCATTGCGGTGCGCGTACCGCCTGGGTTAATGCAGTTGACACGCAGGCGCTGCT‑GATATTCATCGGCCAGTACCTGCATCA‑TCCCTTCGGTGGCAAATTTCGACGCTGCATATGCACCCCAGTTGGCTCGTCCCTGACGTCCAACGCTTGATGAAGTAAAGACCAGTGAACCGGCGTCCGATTTGAGta < 2:555993/250‑1 (MQ=255) cATGATATCAGC‑GGGTGTTTTAAGTTTCTGTGGATC‑TTCGGTCGGGAAGGCGCTGGCACGCATTGCGGTGCGCGTACCGCCTGGGTTAATGCAGTTGACACGCAGGCGCTGCT‑GATATTCATCGGCCAGTACCTGCATCA‑TCCCTTCGGTGGCAAATTTCGACGCTGCATATGCACCCCAGTTGGCTCGTCCCTGACGTCCAACGCTTGGTGAAGTAAAGACCAGTGAACCGGCGTCCGATTTGAGtaa > 2:34547/1‑249 (MQ=255) aGC‑GGGTGTTTTAAGTTTCTGTGGATC‑TTCGGTCGGGAAGGCGCTGGCACGCATTGCGGTGCGCGTACCGCCTGGGTTAATGCAGTTGACACGCAGGCGCTGCT‑GATATTCATCGGCCAGTACCTGCATCA‑TCCCTTCGGTGGCAAATTTCGACGCTGCATATGCACCCCAGTTGGCTCGTCCCTGACGTCCAACGCTTGATGAAGTAAAGACCAGTGAACCGGCGTCCGATTTGAGTAATAAAGGAAg > 1:40877/1‑249 (MQ=255) aGC‑GGGTGTTTTAAGTTTCTGTGGATC‑TTCGGTCGGGAAGGCGCTGGCACGCATTGCGGTGCGCGTACCGCCTGGGTTAATGCAGTTGACACGCAGGCGCTGCT‑GATATTCATCGGCCAGTACCTGCATCA‑TCCCTTCGGTGGCAAATTTCGACGCTGCATATGCACCCCAGTTGGCTCGTCCCTGACGTCCAACGCTTGATGAAGTAAAGACCAGTGAACCGGCGTCCGATTTGAGTAATAAAGGAAg > 2:385857/1‑249 (MQ=255) aGC‑GGGTGTTTTAAGTTTCTGTGGATC‑TTCGGTCGGGAAGGCGCTGGCACGCATTGCGGTGCGCGTACCGCCTGGGTTAATGCAGTTGACACGCAGGCGCTGCT‑GATATTCATCGGCCAGTACCTGCATCA‑TCCCTTCGGTGGCAAATTTCGACGCTGCATATGCACCCCAGTTGGCTCGTCCCTGACGTCCAACGCTTGATGAAGTAAAGACCAGTGAACCGGCGTCCGATTTGAGTAATAAAGGAAGc < 1:491408/250‑1 (MQ=255) gtgtTTTAAGTTTCTGTGGATC‑TTCGGTCGGGAAGGCGCTGGCACGCATTGCGGTGCGCGTACCGCCTGGGTTAATGCAGTTGACACGCAGGCGCTGCT‑GATATTCATCGGCCAGTACCTGCATCA‑TCCCTTCGGTGGCAAATTTCGACGCTGCATATGCACCCCAGTTGGCTCGTCCCTGACGTCCAACGCTTGATGAAGTAAAGACCAGTGAACCGGCGTCCGATTTGAGTAATAAAGGAAGCAGTGc < 1:499471/250‑1 (MQ=255) gtgtTTTAAGTTTCTGTGGATC‑TTCGGTCGGGAAGGCGCTGGCACGCATTGCGGTGCGCGTACCGCCTGGGTTAATGCAGTTGACACGCAGGCGCTGCT‑GATATTCATCGGCCAGTACCTGCATCA‑TCCCTTCGGTGGCAAATTTCGACGCCGCATATGCACCCCAGTTGGCTCGTCCCTGACGTCCAACGCTTGATGAAGTAAAGACCAGTGAACCGGCGTCCGATTTGAGTAATAAAGGAAGCAGTGc > 2:240800/1‑250 (MQ=255) tgtTTTAAGTTTCTGTGGATC‑TTCGGTCGGGAAGGCGCTGGCACGCATTGCGGTGCGCGTACCGCCTGGGTTAATGCAGTTGACACGCAGGCGCTGCT‑GATATTCATCGGCCAGTACCTGCATCA‑TCCCTTCGGTGGCAAATTTCGACGCTGCATATGCACCCCAGTTGGCTCGTCCCTGACGTCCAACGCTTGATGAAGTAAAGACCAGTGAACCGGCGTCCGATTTGAGTAATAAAGGAAGCAGTGcc > 1:774531/1‑250 (MQ=255) | CCAAATGCCGCGGTGGTTTTGCCTTTTCCATTGCCGGTAAAGACGATGATAATACCGCGTTCATCCTGGGCCTGGGCCACACGAGCATCTACTTTTTCTTTCACTCGCTGCTGACGCTGTTGGTAGCGTTCATCACTCATTGGGAAATTCCTGGTTTACGGCCCGGTTGGGCGTCAAAGGTCATGCCGGTTTTACGGCGGCTGTCATCGCCCATCAGCCAGAGGTAGAGCGGCATGATATCAGC‑GGGTGTTTTAAGTTTCTGTGGATC‑TTCGGTCGGGAAGGCGCTGGCACGCATTGCGGTGCGCGTACCGCCTGGGTTAATGCAGTTGACACGCAGGCGCTGCT‑GATATTCATCGGCCAGTACCTGCATCA‑TCCCTTCGGTGGCAAATTTCGACGCTGCATATGCACCCCAGTTGGCTCGTCCCTGACGTCCAACGCTTGATGAAGTAAAGACCAGTGAACCGGCGTCCGATTTGAGTAATAAAGGAAGCAGTGCC > NZ_CP009273/1322475‑1322971 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |