Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NZ_CP0092732,145,1670GT41.3% 30.6 / 14.3 46intergenic (+40/+25)yegJ/pphCDUF2314 domain‑containing protein/protein‑serine/threonine phosphatase PphC
Reads supporting (aligned to +/- strand):  ref base G (12/15);  new base T (5/14);  total (17/29)
Fisher's exact test for biased strand distribution p-value = 2.35e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 8.67e-01
Rejected as consensus: Frequency below/above cutoff threshold.

ACGGCATGTTTATTGGCGTAATCAGCAATGACCCTGGTATTGTTACAAACGTAGAATAT‑GGCCAGGAGTGGAAAATCAAGAAAGAAGATATTTCAGACTGGA‑TGTATACGCGCGGGGATAAAATTTACGGCGG‑TTATACCATTGATCC‑TTTATTGGTCACCT‑ATCCAAAAGAAGAAG‑CCGA‑CGAGCTAAGAGCAAAATTAGTTCGCTAATCAGCCGTTATA‑TTTATTGTTTAAA‑CTGGCGGTTGAA‑TTGTTGTCTTCAACCGCCATGAGAAACTCACTCTGCCCACAGCGCCAGTGCCAACGTTTTATCATCATCCGTACGCTCGTTTACCGCCGGGCTGGACAAAAACTGCTTTAACAATTCAGGTAATAAATCGAGTTGTTCCTGCGTTGCTGCCGCCAGTCCATTGAAAAACGGGGTAAAGAAAGGCACATGAGGAGAATTATCCAGCATATTTAACGCCAGTCGCTGGATACCATCCGTAAATGCTGCA  >  NZ_CP009273/2144919‑2145411
                                                                                                                                                                                                                                                                  |                                                                                                                                                                                                                                                    
aCGGCATGTTTATTGGCGTAATCAGCAATGACCCTGGTATTGTTACAAACGTAGAATAT‑GGCCAGGAGTGGAAAATCAAGAAAGAAGATATTTCAGACTGGA‑TGTATACGCGCGGGGATAAAATTTACGGCGG‑TTATACCATTGATCC‑TTTATTGGTCACCT‑ATCCAAAAGAAGAAG‑CCGA‑CGAGCTAAGAGCAAAATTAGTTCGCTAATCAGCCGTTATA‑TTTATTGTTTAAA‑CTGGCGGTTGAA‑ttg                                                                                                                                                                                                                                                      <  2:223541/249‑1 (MQ=255)
 cGGCATGTTTATTGGCGTAATCAGCAATGACCCTGGTATTGTTACAAACGTAGAATAT‑GGCCAGGAGTGGAAAATCAAGAAAGAAGATATTTCAGACTGGA‑TGTATACGCGCGGGGATAAAATTTACGGCGG‑TTATACCATTGATCC‑TTTATTGGTCACCT‑ATCCAAAAGAAGAAG‑CCGA‑CGAGCTAAGAGCAAAATTAGTTCGCTAATCAGCCGTTATA‑TTTATTGTTTAAA‑CTGGCGGTTGAA‑ttgtt                                                                                                                                                                                                                                                    <  2:694479/250‑1 (MQ=255)
   gCATGTTTATTGGCGTAATCAGCAATGACCCTGGTATTGTTACAAACGTAGAATAT‑GGCCAGGAGTGGAAAATCAAGAAAGAAGATATTTCAGACTGGA‑TGTATACGCGCGGGGATAAAATTTACGGCGG‑TTATACCATTGATCC‑TTTATTGGTCACCT‑ATCCAAAAGAAGAAG‑CCGA‑CGAGCTAAGAGCAAAATTAGTTCGCTAATCAGCCGTTATA‑TTTATTGTTTAAA‑CTGGCGGTTGAA‑Ttgttgt                                                                                                                                                                                                                                                  <  2:286930/250‑1 (MQ=255)
   gCATGTTTATTGGCGTAATCAGCAATGACCCTGGTATTGTTACAAACGTAGAATAT‑GGCCAGGAGTGGAAAATCAAGAAAGAAGATATTTCAGACTGGA‑TGTATACGCGCGGGGATAAAATTTACGGCGG‑TTATAACCTTTTTCC‑TTTTTTTGTTACCT‑ATTCCAAAAAAAAAA‑ACGA‑CGAGGTAAGAGGAAAAATAGTTTGCTAATCAGCCGCTTTA‑TTTTTTTTTTTAA‑ATGGCGGGTGGA‑ttttttt                                                                                                                                                                                                                                                  >  1:47782/1‑248 (MQ=255)
      tGTTTATTGGCGTAATCAGCAATGACCCTGGTATTGTTACAAACGTAGAATAT‑GGCCAGGAGTGGAAAATCAAGAAAGAAGATATTTCAGACTGGA‑TGTATACGCGCGGGGATAAAATTTACGGCGG‑TTATACCATTGATCC‑TTTATTGGTCACCT‑ATCCAAAAGAAGAAG‑CCGA‑CGAGCTAAGAGCAAAATTAGTTCGCTAATCAGCCGTTATA‑TTTATTGTTTAAA‑CTGGCGGTTGAA‑TTGTTGTCtt                                                                                                                                                                                                                                               <  1:638199/250‑1 (MQ=255)
          tATTGGCGTAATCAGCAATGACCCTGGTATTGTTACAAACGTAGAATAT‑GGCCAGGAGTGGAAAATCAAGAAAGAAGATATTTCAGACTGGA‑TGTATACGCGCGGGGATAAAATTTACGGCGG‑TTTTACCATTTATCCTTTTTTTGGTACCCT‑TTCCAAAA‑AAGAAA‑ACGA‑CGAGCTAAGAGGAAAAATAATTTTCTTATCAACCGCTATA‑TTTTTTTTTTTAA‑ATGGCGGGGGGA‑ttgtttttttttaa                                                                                                                                                                                                                                           >  1:820455/1‑241 (MQ=255)
          tATTGGCGTAATCAGCAATGACCCTGGTATTGTTACAAACGTAGAATAT‑GGCCAGGAGTGGAAAATCAAGAAAGAAGATATTTCAGACTGGA‑TGTATACGCGCGGGGATAAAATTTACGGCGG‑TTATACCATTGATCC‑TTTATTGGTCACCT‑ATCCAAAAGAAGAAG‑CCGA‑CGAGCTAAGAGCAAAATTAGTTCGCTAATCAGCCGTTATA‑TTTATTGTTTAAA‑CTGGCGGTTGAA‑TTGTTGTCTTCaa                                                                                                                                                                                                                                            <  2:447847/249‑1 (MQ=255)
            ttGGCGTAATCAGCAATGACCCTGGTATTGTTACAAACGTAGAATAT‑GGCCAGGAGTGGAAAATCAAGAAAGAAGATATTTCAGACTGGA‑TGTATACGCGCGGGGATAAAATTTACGGCGG‑TTTTTACAATTATTC‑TTTTTTTGTTACCT‑ATTCCAAAAAAGAAA‑CCGA‑CCAGGTAAAAGCAAAAATAATTTGCTTATTAACCGGTATATTTTTTTTTTTAAA‑TTGCGGGTTGAA‑tttttttttttaccc                                                                                                                                                                                                                                          >  1:115909/1‑240 (MQ=255)
                     tCAGCAATGACCCTGGTATTGTTACAAACGTAGAATAT‑GGCCAGGAGTGGAAAATCAAGAAAGAAGATATTTCAGACTGGA‑TGTATACGCGCGGGGATAAAATTTACGGCGG‑TTATACCATTGATCT‑TTTATTGGTCCCCT‑ATCCAAAAGAAGAAG‑CCGA‑CGAGCTAAGAGAAAAATTAGTTCGCTAATCAGCCGTTATA‑TTTATTGTTTAAA‑CGGGCGGTTGAA‑TTGTTGTCTTCAACCGCCATGAGaa                                                                                                                                                                                                                                <  1:445111/250‑1 (MQ=255)
                                ccTGTTATTGTTAAAAACGTAAAATAG‑GGCCAGGAGTGAAAAATAAAGAAAGAAAATATTCCAGACTGGA‑TTTATCCGCGGGGGGAAAAAATTTACGGGGT‑TTATACCATTGACCT‑TTTATTGGTCCCCT‑ATCAAAAAGAAGAAG‑CCGA‑CGAGCAAAGAGAAAAATTAGTTCGCTAATCAGCCTTTATA‑TTTATTTTTAAAA‑CGGGCGGTTGAA‑TTGTTGTCTTCAACCGCCATGAGAAACTCACTCTGc                                                                                                                                                                                                                     <  1:92696/250‑1 (MQ=255)
                                              aaaggaaaaaTAG‑GGCGAGGAGAGAAAAAAAAAAAAAAAATATTTTTAAGTCTGTA‑TTTATCCGCGGGGGAAAAAATTTTACGGCGG‑TTATACAATTGTCCT‑TTTTTTGGTCCCCT‑A‑CCAAAAAAAAAAGCCCGA‑GGAGAAAAGAGAAAAATAAGTTCTAAAATCGGCTTTTATT‑TTTTTTTTTAAAC‑CTGGCGTTTGAT‑TTTTTGTCTTAAACCGCCATGAGAAACTCACTCTGCCCACAGCGCCAGTg                                                                                                                                                                                                       <  2:37818/242‑1 (MQ=255)
                                                acgaaaaaTAG‑GGCAAGGAGGGAAAAATAAAAAAAAAAAATTTTTCAGCCTGGA‑TTTATCCGCGGGGGAAAAAAATTTACGGGGG‑TTATCCCTTTGATCT‑TTTATTGGTCCCTT‑ATCAAAAAAAAAAAG‑CCGA‑CGAGCAAAGAGAAAATTTAGTTCGTTAACCAGCCTTTATA‑TTTATTTTTAAAA‑CGGGCGTTTAAT‑TTTTTGTCTTCAACCGCCATGAGAAACTCACTCTGCCCACAGCGCCAGTGcc                                                                                                                                                                                                     <  1:425345/244‑1 (MQ=255)
                                                      aaTATGGGCCAGGAGTGAAAAAAAAAAAAAGAAGAT‑TTTCAAGATGGATTTTAACCGCGGGGGAAAAAATTTTAGGGGGT‑TTATCCCTTTGTTCT‑TTTTTTGTCCCCCT‑ACCAAAAAGAAGAAG‑CCGA‑CGAGTAAAAAAAAAAATTATTTCTCTAACCAGCCTTTATA‑TTTTTTGTTAAAA‑CGGGCGTTTAAT‑TTTTTGTCTCAAACCGCCATGAGAAACTCACTCTGCCCACAGCGCCAGTGCCAACGt                                                                                                                                                                                                <  2:72643/250‑1 (MQ=255)
                                                             gCCAGGAGTGAAAAATAAAAAAAGAAGATATTTCAGACTGGA‑TGTATACGCGGGGGGAAAAAATTTACGGCGG‑TTATACCATTGATCC‑TTTATTGGTCCCCT‑ATCAAAAAGAAGAAG‑CCGA‑CGAGCAAAGAGAAAAATTAGTTCGCTAATCAGCCGTTATA‑TTTATTTTTTAAA‑CGGGGGGTTAAA‑TTGTTGTCTACAACCGCCATGAGAAACTCACTCTGCCCACAGCGCCAGTGCCAACGTTTTatca                                                                                                                                                                                         <  1:872777/250‑1 (MQ=255)
                                                                aGGAGTGAAAAATCAAAAAAGAAGATATTTCAGACTGGA‑TGTATCCGCGCGGGAATAAAATTTACGGCGT‑TTATACCATTGATCC‑TTTATTGGTCCCCT‑ATCAAAAAGAAGAAG‑CCGA‑CGAGCTAAGAGCAAAATTAGTTCGCTAATCAGCCTTTATT‑TTTATTGTTTAAA‑CTGGCGGTTGAA‑TTGTTGTCTTCAACCGCCATGAGAAACTCACTCTGCCCACAGCGCCAGTGCCAACGTTTTatcatca                                                                                                                                                                                      <  1:705541/250‑1 (MQ=255)
                                                                    gggaaaaaACAAAAAAGAAGATTTTACAGACTGGT‑TGTATACG‑GGGGGGAAAAAATTTACGGGGGTTTATACCTTTGATCT‑TTTTTTGGTCCCCT‑ACCAAAAAAAAAAAG‑CCGA‑CGAGTAAAGAAAAAAATTATTTCGCTAACCAGCCTTTATA‑TTTATTTTTAAAA‑CGGGCGGTTGAT‑TTTTTGTCTTCAACCGCCATGAGAAACTCACTCTGCCCACAGCGCCAGTGCCAACGTTTTATCATCATCCg                                                                                                                                                                                  <  2:727116/246‑1 (MQ=255)
                                                                      gaaaaacaaagaaaaaAAATATTCAAGACTGGA‑TGAATACGCGGGGGGAAAAAATTTACGGGGT‑TTATCCCATTGATCC‑TTTATTGGTCACCT‑ATCCAAAAGAAGAAC‑CCGA‑CGAGCTAAAAGCAAAATTAGTTCGCTAATCAGCCTTTATA‑TTTATTGTTTAAA‑CTGGCGTTTAAA‑TTGTTGTCTTCAACCGCCATGAGAAACTCACTCTGCCCACAGCGCCAGTGCCAACGTTTTATCATCATCCGTa                                                                                                                                                                                <  1:360734/242‑1 (MQ=255)
                                                                                       gaTTTTTCAGACTGAA‑TGTATACGCGGGGGGATAAAATTTACGGGGT‑TTATCCCTTTAATCT‑TTTATTGGTCCCCT‑ACCAAAAAGAAAAAC‑CCAA‑CGAGCAAAGAAAAAAATTGGTTCGTTAATCAGCGTTTATT‑TTTATTTTTAAAA‑CGGGCGTTTAAA‑TTGTTGTCTTAAACCGCCATGAGAAACTCACTCTGCCCACAGCGCCAGTGCCAACGTTTTATCATCATCCGTACGCTCGTTTACCGCCgg                                                                                                                                                               <  1:793614/250‑1 (MQ=255)
                                                                                            ttcaaccgggA‑TGTATACGCGCGGAGAAAAAATTTACGGGTG‑TTATACCTTTGATCT‑TTTATGGGTCACCT‑ACACAAAAAAAGAGG‑CCAA‑CGAGCAAAAAAAAAAATTAGTTCCCTAACCAGCCTTTATT‑TTTTTTTTTAAAC‑CGGGGGGTTGAT‑TTTTTTTCTCCAACCGCCATGAGAAACTCACTCTGCCCACAGCGCCAGTGCCAACGTTTTATCATCATCCGTACGCTCGTTTACCGCCGGGCTg                                                                                                                                                           <  2:884898/241‑1 (MQ=255)
                                                                                                                        aaaatTTTAGGGGGT‑TTATACTTTTTAT‑C‑TTTATTGGTCACCTAAAAAAAAAAAAGAAG‑CCGA‑GGAGAAAAGAAAAAAATTGTTTCATAAACCAGCCGTTATT‑TTTTTTGTTAAAA‑CGGGGGGTTAAA‑TTGTTGTCTTAAACCGCCATGAGAAACTCACTCTGCCCACAGCGCCAGTGCCAACGTTTTATCATCATCCGTACGCTCGTTTACCGCCGGGCTGGACAAAAACTGCTTTAACAATTCAGGta                                                                                                                               <  2:738165/249‑1 (MQ=255)
                                                                                                                        aaaaaTTTCCGGCGT‑TAATACCATTGTTCT‑TTTATTGGCCCCCT‑ACCAAAAAAAAGAAG‑CCGA‑CGAGCAAAGAGAAAAATTATTCCGCAAACCAGCCTTTATT‑TTTTTTGTTAAAC‑CGGGGGGTTGAT‑TTTTTGTCTTAAACCGCCATGAGAAACTCACACTGCCCACAGCGCCAGTGCCAACGTTTTATCATCATCCGTACGCTCGTTTACCGCCGGGCTGGACAAAAACTGCTTTAACAATTCAGGta                                                                                                                               <  1:729336/249‑1 (MQ=255)
                                                                                                                             tttACGGCGT‑TTATCCCATTGATCT‑TTTATTGTTCCCCT‑ACCAAAAAAAAGAAG‑CCGA‑CGAGCTAAGAGAAAAATTAGTTCGCTAATCAGCCTTTATT‑TTTTTTTTTTAAC‑CTGGCGGTTGAA‑TTTTTGTCTACAACCGCCATGAGAAACTCACTCTGCCCACAGCGCCAGTGCCAACGTTTTATCATCATCCGTACGCTCGTTTACCGCCGGGCTGGACAAAAACTGCTTTAACAATTCAGGTAATaaa                                                                                                                          <  1:84618/250‑1 (MQ=255)
                                                                                                                                aCGGCGT‑TTATCCCTTTGATCT‑TTTATTGGTCACCT‑ATCAAAAAGAAGAAG‑CCGA‑CGAGAAAAGAAAAAAATTGTTTCGTAAACCAGCCTTTATT‑TTTTTTGTTAAAC‑CGGGCGTTTAAT‑TTGTTGTCTTCAACCGCCATGAGAAACTCACTCTGCCCACAGCGCCAGTGCCAACGTTTTATCATCATCCGTACGCTCGTTTACCGCCGGGCTGGACAAAAACTGCTTTAACAATTCAGGTAATAAATc                                                                                                                        <  1:269796/249‑1 (MQ=255)
                                                                                                                                           taCCATTGATCC‑TTTATTGGTCACCT‑ATCCAAAAGAAGAAG‑CCGA‑CGAGCTAAGAGCAAAATTAGTTCGCTAATCAGCCGTTATA‑TTTATTGTTTAAA‑CTGGCGGTTGAA‑TTGTTGTCTTCAACCGCCATGAGAAACTCACTCTGCCCACAGCGCCAGTGCCAACGTTTTATCATCATCCGTACGCTCGTTTACCGCCGGGCTGGACAAAAAATGCTTTAACAATTCAGGTAATAAATCGAGTTGTTCCt                                                                                                             >  1:821570/1‑250 (MQ=255)
                                                                                                                                             cccttttacctttttttGTTCCCCT‑A‑CCAAAAAAAAAAG‑CCCACCGAGAAAAGAAAAAATTTATTTC‑TTAATCCGGCCTTTTT‑TTTTTTTTTTAAACCGGGCGTTTAAT‑TTTTTGTCTCCAACCGCCATGAGAAACTCACTCTGCCCACAGCGCCAGTGCCAACGTTTTATCATCATCCGTACGCTCGTTTACCGCCGGGCTGGACAAAAACTGCTTTAACAATTCAGGTAATAAATCGAGTTGTTCCt                                                                                                             <  2:128867/238‑1 (MQ=255)
                                                                                                                                                      c‑TTTATTGGTCACCT‑ATCAAAAAGAAGAAG‑CCGA‑CGAGCTAAGAAAAAAATTAGTCCGCTAATCAGCCTTTATA‑TTTATTGTTAAAA‑CGGGCGGTTGAA‑TTGTTGTCTTCAACCGCCATGAGAAACTCACTCTGCCCACAGCGCCAGTGCCAACGTTTTATCATCATCCGTACGCTCGTTTACCGCCGGGCTGGACAAAAACTGCTTTAACAATTCAGGTAATAAATCGAGTTGTTCCTGCGTtgctgc                                                                                                   <  1:101225/249‑1 (MQ=255)
                                                                                                                                                         ttatggccccccT‑ATCAAAAAAAAGAGG‑CCAA‑CGAGCAAAGAGCAAAATTGGTTCGTTAACCAGCTTTTATA‑TTTTTTGTTTAAA‑CGGGCGTTTAAT‑TTGTTGTCTCCAACCGCCATGAGAAACTCACTCTGCCCACAGCGCCAGTGCCAACGTTTTATCATCATCCGTACGCTCGTTTACCGCCGGGCTGGACAAAAACTGCTTTAACAATTCAGGTAATAAATCGAGTTGTTCCTGCGTTGCTgcc                                                                                                  <  1:80445/238‑1 (MQ=255)
                                                                                                                                                                  aCCT‑ATCCAAAAGAAGAAG‑CCGA‑CGAGCTAAGAGCAAAATTAGTTCGCTAATCAGCCGTTATA‑TTTATTGTTTAAA‑CTGGCGGTTGAA‑TTGTTGTCTTCAACCGCCATGAGAAACTCACTCTGCCCACAGCGCCAGTGCCAACGTTTTATCATCATCCGTACGCTCGTTTACCGCCGGGCTGGACAAAAACTGCTTTAACAATTCAGGTAATAAATCGAGTTGTTCCTGCGTTGCTGCCGCCCGTCCAtt                                                                                       >  1:569919/1‑250 (MQ=255)
                                                                                                                                                                            aaaGAAGAAG‑CCGA‑CGAGCTAAGAGCAAAATTAGTTCGCTAATCAGCCGTTATA‑TTTATTGTTTAAA‑CTGGCGGTTGAA‑TTGTTTTCTTCAACCGCCATGAGAAACTCACTCTGCCCACAGCGCCCGTGCCAACGTTTTATCATCATCCGTACGCTCGTTTACCGCCGGGCTGGGCAAAAACTGCTTTAACAATTCAGGTAATAAATCGAGTTGTTTCCGCGTTTCTGCCGCCCGTCCCTTGAAAAACgg                                                                              >  2:831793/1‑250 (MQ=255)
                                                                                                                                                                              agaagaag‑CCGA‑CGAGCTAAGAGCAAAATTAGTTCGCTAATCAGCCGTTATA‑TTTATTGTTTAAA‑CTGGCGGTTGAA‑TTTTTGTCTTCAAACCCCATGAGAAAATCACTCTGCCCCCAGCGCCCGTGCCCACCTTTTTTCATCATCCCTACGCTCCTTTACCGCCCGGCTGGACAAAAAACGCTTTAACAATTTAGGGAATAAATCGAGGTGTTCCTGCGTTGCTGCCGCCAGTCCCTTTAAAAACaggg                                                                            >  2:759710/1‑250 (MQ=255)
                                                                                                                                                                               gaagaag‑CCGA‑CGAGCTAAGAGCAAAATTAGTTCGCTAATCAGCCGTTATA‑TTTATTGTTTAAA‑CTGGCGGTTGAA‑TTGTTTTCTTCAACCGCCATGAGAAACTCACTCTGCCCACAGCGCCAGTGCCCACGTTTTATCATCATCCGTACGCTCGTTTACCGCCGGGCTGGACAAAAACTGCTTTAACAATTCAGGTAATAAATCGAGTTGTTCCTGCGTTTCTGCCGCCCGTCCATTGAAAAACgggg                                                                            >  1:76574/1‑249 (MQ=255)
                                                                                                                                                                                  agagcccGA‑CGAGAAAAGAAAAAATTTATTCCGCTAATCACCCTTTTTT‑TTTTTTTTTAAAC‑CTGGGGTTTAAT‑TTTTTTTCTCCAACCGCCATGAGAAACTCACTCTGCCCACAGCGCCAGTGCCAACGTTTTATCATCATCCGTACGCTCGTTTACCGCCGGGCTGGACAAAAACTGCTTTAACAATTCAGGTAATAAATCGAGTTGTTCCTGCGTTGCTGCCGCCAGTCCATTGAAAAACGGGGTaa                                                                         <  1:761740/245‑1 (MQ=255)
                                                                                                                                                                                         ga‑cgaGCTAAGAGCAAAATTAGTTCGCTAATCAGCCGTTATA‑TTTATTGTTTAAA‑CTGGCGGTTGAA‑TTGTTGTCTTCAACCGCCATGAGAAACTCACTCTGCCCACAGCGCCAGTGCCAACGGTTTATCATCATCCGTACGCTCGTTTACCGCCGGGCTGGACAAAAACTGCTTTAACAATTCAGGTAATAAATCGAGTTGTTCCTGCGTTGCTGCCGCCAGTCCATTGAAAAACGGGGTAAAGAAAgg                                                                  >  1:519556/1‑250 (MQ=255)
                                                                                                                                                                                                  aaGAGCAAAATTAGTTCGCTAATCAGCCGTTATA‑TTTATTGTTTAAA‑CTGGCGGTTGAA‑TTTTTTTCTTCAACCGCCATGAGAAAATCACTCTGCCCACAGCGCCAGTGCCAACGTTTTATTATTATCCGTAAGCTCGTTTACCGCCGGGCTGGAAAAAAACTTCTTTTAAAATTCAGGGAATAAAACGAGTTGTACCTGCGTTGCTGCCGCCAGTCCATTGAAAAAAGGGGGAAAGAAAGGCACATgag                                                          >  2:159328/1‑250 (MQ=255)
                                                                                                                                                                                                  aaGAGCAAAATTAGTTCGCTAATCAGCCGTTATA‑TTTATTGTTTAAA‑CTGGCGGTTGAA‑TTGTTGTCTTCAACCGCCATGAGAAAATCACTCTGCCCACAGCGCCAGTGCCAACGTTTTATCATCATCCGTACGCCCGTTTACCGCCGGGCTGGACAAAAAATGCTTTAACAATTCAGGTAATAAATCGAGTTGTTCCTGCGGTGCTGCCGCCAGTCCATTGAAAAACGGGGTAAAGAAAGGCACATgag                                                          >  2:710846/1‑250 (MQ=255)
                                                                                                                                                                                                     aaaaaatTTAGTTCGATACTCATCTTTTATA‑TTTTTTTTTAAAA‑CTGGGGGTTAAT‑TTTTTGTCTTAACCCGCCATGAGAAACTCACTCTGCCCACAGCGCCAGTGCCAACGTTTTATCATCATCCGTACGCTCGTTTACCGCCGGGCTGGACAAAAACTGCTTTAACAATTCAGGTAATAAATCGAGTTGTTCCTGCGTTGCTGCCGCCAGTCCATTGAAAAACGGGGTAAAGAAAGGCACATgaggag                                                       <  2:371057/247‑1 (MQ=255)
                                                                                                                                                                                                                ttCGCTAATCAGCCGTTATA‑TTTATTGTTTAAA‑CTGGCGGTTTAA‑TTTTTTTCTTCCACCGCCATGAGAAACTCAATCTGCCCACAGCGCCAGTGCCAACGTTTTTTCATCATCCGTACGCTCGTTTACCGCCCGGGTGGGCAAAAAATGCTTTAACAATTCAGGGAATAAATCGAGTTGTTCCTGCGGTGCTGCCGCCAGTCCATTGAAAAACGGGGGAAAGAAAGGCACATGAGGAGAATTATCCAGc                                            >  2:324455/1‑250 (MQ=255)
                                                                                                                                                                                                                ttCGCTAATCAGCCGTTATA‑TTTATTGTTTAAA‑CTGGCGGTTGTA‑TTGTTGTCTTCCACCGCCCTGAGAAAATCACTCTGCCCACAGCGCCAGTGCCAACGTTTTTTCATCATCCGTACGCTCGTTTACCGCCCGGCTGGACAAAAACTGCTTTAACAATTCAGGGAATAAATCGAGTTGTTCCTGCGTTGCTGCCGCCCGTCCATTGAAAAAAGGGGGAAAGAAAGGCACATGAGGAGAATTTTCCAGc                                            >  2:539400/1‑250 (MQ=255)
                                                                                                                                                                                                                   gtaaaccAGCCTTTATT‑TTTTTTTTTAAAC‑CGGGGGGTTAAT‑TTGTTTTTTAAAACCGCCATGAGAAACTCACTCTGCCCACAGCGCCAGTGCCAACGTTTTATCATCATCCGTACGCTCGTTTACCGCCGGGCTGGACAAAAACTGCTTTAACAATTCAGGTAATAAATCGAGTTGTTCCTGCGTTGCTGCCGCCAGTCCATTGAAAAACGGGGTAAAGAAAGGCACATGAGGAGAATTATCCAGCata                                         <  1:168877/244‑1 (MQ=255)
                                                                                                                                                                                                                    caaaTCTGCTGTTATT‑TTTATTTTATAAC‑GTGGGTGTTAAA‑TTTTTGTCTCCAACCGCCATGAGAAACTCACTCTGCCCACAGCGCCAGTGCCAACGTTTTATCATCATCCGTACGCTCGTTTACCGCCGGGCTGGACAAAAACTGCTTTAACAATTCAGGTAATAAATCGAGTTGTTCCTGCGTTGCTGCCGCCAGTCCATTGAAAAACGGGGTAAAGAAAGGCACATGAGGAGAATTATCCAGCatat                                        <  2:237436/248‑1 (MQ=255)
                                                                                                                                                                                                                          aGCCGTTATA‑TTTATTGTTTAAA‑CTGGCGGTTGAA‑TTGTTTTCTTCAACCGCCATGAGAAACTCACTCTGCCCACAGCGCCAGTGCCAACGTTTTATCATCATCCGTACGCTCGTTTACCGCCGGGCTGGACAAAAACTGCTTTAACAATTCAGGTAATAAATCGAGTTGTTCCTGCGTTGCTGCCGCCAGTCCATTGAAAAACGGGGTAAAGAAAGGCACATGAGGAGAATTATCCAGCATATTTAACg                                  >  2:95451/1‑250 (MQ=255)
                                                                                                                                                                                                                           gCCGTTATA‑TTTATTGTTTAAA‑CTGGCGGTTGAA‑TTGTTGTCTTCAACCGCCATGAGAAACTCACTCTGCCCACAGCGCCAGTGCCAACGTTTTATCATCATCCGTACGCTCGTTTACCGCCGGGCTGGACAAAAACTGCTTTAACAATTCAGGTAATAAATCGAGTTGTTCCTGCGTTGCTGCCGCCAGTCCATTGAAAAACGGGGTAAAGAAAGGCACATGAGGAGAATTATCCAGCATATTTAACGc                                 >  1:502648/1‑250 (MQ=255)
                                                                                                                                                                                                                             ccctttttttttttttttAAA‑CCGGGGGTTTAATTTTTTGTCTCAAACCGCCATGAGAAACTCACTCTGCCCACAGCGCCAGTGCCAACGTTTTATCATCATCCGTACGCTCGTTTACCGCCGGGCTGGACAAAAACTGCTTTAACAATTCAGGTAATAAATCGAGTTGTTCCTGCGTTGCTGCCGCCAGTCCATTGAAAAACGGGGTAAAGAAAGGCACATGAGGAGAATTATCCAGCATATTTAACGc                                 <  1:177086/242‑1 (MQ=255)
                                                                                                                                                                                                                                        attGTTTAAA‑CTGGCGGTTGAA‑TTTTTTTCTTCAACCCCCATGAGAAAATCACTCTGCCCCCAGCGCCAGTGCCAAAGTTTTTTCATCATCCGTACGCTCGTTTACCGCCGGGGTGGACAAAAACTGCTTTTAAAATTTCGGTAATAAAACGAGGTGTTCCTGCGTTGCTGCCGCCAGTCCATTGAAAAACGGGGTAAAGAAAGGCACATGAGGAGAATTATCCAGCATATTTAACGCCAGTCGCTGGa                      >  2:270573/1‑249 (MQ=255)
                                                                                                                                                                                                                                         ttttttAAC‑CGGGCGGTTAAT‑TTTTTGTCTTCAACCGCCATGAGAAACTCACTCTGCCCACAGCGCCAGTGCCAACGTTTTATCATCATCCGTACGCTCGTTTACCGCCGGGCTGGACAAAAACTGCTTTAACAATTCAGGTAATAAATCGAGTTGTTCCTGCGTTGCTGCCGCCAGTCCATTGAAAAACGGGGTAAAGAAAGGCACATGAGGAGAATTATCCAGCATATTTAACGCCAGTCGCTGGAt                     <  1:250078/246‑1 (MQ=255)
                                                                                                                                                                                                                                            tttAAA‑CTGGCGGTTGAA‑TTTTTGTCTTCCACCGCCATGAGAAACTCACTCTGCCCACAGCGCCAGTGCCAACGTTTTATCATCATCCGTACGCTCGTTTACCGCCGGGCTGGACAAAAAATGCTTTAACAATTCAGGTAATAAATCGAGTTGTTCCTGCGTTGCTGCCGCCAGTCCATTGAAAAACGGGGGAAAGAAAGGCACATGAGGAGAATTATCCAGCATATTTAAAGCCAGTCGCCGGGTAcc                  >  2:330482/1‑249 (MQ=255)
                                                                                                                                                                                                                                            tttAAA‑CTGGCGGTTGAA‑TTGTTGTCTTCAACCGCCATGAGAAACTCACTCTGCCCACAGCGCCAGTGCCAACGGTTTATCATCATCCGTACGCTCGTTTACCGCCGGGCTGGACAAAAACTGCTTTAAAAATTCAGGGAATAAATCGAGTTGTTCCTGCGTTGCTGCCGCCAGTCCATTGAAAAACGGGGTAAAGAAAGGCACATGAGGAGAATTATCCAGCATATTTAACGCCAGTCGCTGGATACCa                 >  1:299882/1‑250 (MQ=255)
                                                                                                                                                                                                                                               aaaccgggCGGTTGAT‑TTGTTGTCTCAAACCGCCATGAGAAACTCACTCTGCCCACAGCGCCAGTGCCAACGTTTTATCATCATCCGTACGCTCGTTTACCGCCGGGCTGGACAAAAACTGCTTTAACAATTCAGGTAATAAATCGAGTTGTTCCTGCGTTGCTGCCGCCAGTCCATTGAAAAACGGGGTAAAGAAAGGCACATGAGGAGAATTATCCAGCATATTTAACGCCAGTCGCTGGATACCAt                <  1:326270/243‑1 (MQ=255)
                                                                                                                                                                                                                                                     ggCGGTTGAA‑TTGTTGTCTTCAACCGCCATGAGAAACTCACTCTGCCCACAGCGCCAGTGCCAACGTTTTATCATCATCCGTACGCTCGTTTACCGCCGGGCTGGACAAAAACTGCTTTAACAATTCAGGTAATAAATCGAGTTGTTCCTGCGTTGCTGCCGCCAGTCCATTGAAAAACGGGGTAAAGAAAGGCACATGAGGAGAATTATCCAGCATATTTAACGCCAGTCGCTGGATACCATCCGTaaa         >  1:937240/1‑250 (MQ=255)
                                                                                                                                                                                                                                                        ggTTGAA‑TTGTTGTCTTCAACCGCCATGAGAAACTCACTCTGCCCACAGCGCCAGTGCCAACGTTTTATCATCATCCGTACGCTCGTTTACCGCCGGGCTGGACAAAAACTGCTTTAACAATTCAGGTAATAAATCGAGTTGTTCCTGCGTTGCTGCCGCCAGTCCATTGAAAAACGGGGTAAAGAAAGGCACATGAGGAGAATTATCCAGCATATTTAACGCCAGTCGCTGGATACCATCCGTAAAtgc      >  2:881139/1‑250 (MQ=255)
                                                                                                                                                                                                                                                         gTTAAA‑TTGTTGTCTTAAACCGCCATGAGAAACTCACTCTGCCCACAGCGCCAGTGCCAACGTTTTATCATCATCCGTACGCTCGTTTACCGCCGGGCTGGACAAAAACTGCTTTAACAATTCAGGTAATAAATCGAGTTGTTCCTGCGTTGCTGCCGCCAGTCCATTGAAAAACGGGGTAAAGAAAGGCACATGAGGAGAATTATCCAGCATATTTAACGCCAGTCGCTGGATACCATCCGTAAAtgct     <  1:352230/250‑1 (MQ=255)
                                                                                                                                                                                                                                                            aaa‑TTTTTGTCTACAACCGCCATGAGAAACTCACTCTGCCCACAGCGCCAGTGCCAACGTTTTATCATCATCCGTACGCTCGTTTACCGCCGGGCTGGACAAAAACTGCTTTAACAATTCAGGTAATAAATCGAGTTGTTCCTGCGTTGCTGCCGCCAGTCCATTGAAAAACGGGGTAAAGAAAGGCACATGAGGAGAATTATCCAGCATATTTAACGCCAGTCGCTGGATACCATCCGTAAAtgctgc   <  1:638278/248‑1 (MQ=255)
                                                                                                                                                                                                                                                             aatttgtttTCTAAAACCGCCATGAGAAACTCACTCTGCCCACAGCGCCAGTGCCAACGTTTTATCATCATCCGTACGCTCGTTTACCGCCGGGCTGGACAAAAACTGCTTTAACAATTCAGGTAATAAATCGAGTTGTTCCTGCGTTGCTGCCGCCAGTCCATTGAAAAACGGGGTAAAGAAAGGCACATGAGGAGAATTATCCAGCATATTTAACGCCAGTCGCTGGATACCATCCGTAAATGCTGCa  <  1:627738/247‑1 (MQ=255)
                                                                                                                                                                                                                                                                  |                                                                                                                                                                                                                                                    
ACGGCATGTTTATTGGCGTAATCAGCAATGACCCTGGTATTGTTACAAACGTAGAATAT‑GGCCAGGAGTGGAAAATCAAGAAAGAAGATATTTCAGACTGGA‑TGTATACGCGCGGGGATAAAATTTACGGCGG‑TTATACCATTGATCC‑TTTATTGGTCACCT‑ATCCAAAAGAAGAAG‑CCGA‑CGAGCTAAGAGCAAAATTAGTTCGCTAATCAGCCGTTATA‑TTTATTGTTTAAA‑CTGGCGGTTGAA‑TTGTTGTCTTCAACCGCCATGAGAAACTCACTCTGCCCACAGCGCCAGTGCCAACGTTTTATCATCATCCGTACGCTCGTTTACCGCCGGGCTGGACAAAAACTGCTTTAACAATTCAGGTAATAAATCGAGTTGTTCCTGCGTTGCTGCCGCCAGTCCATTGAAAAACGGGGTAAAGAAAGGCACATGAGGAGAATTATCCAGCATATTTAACGCCAGTCGCTGGATACCATCCGTAAATGCTGCA  >  NZ_CP009273/2144919‑2145411

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑