| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NZ_CP009273 | 762,172 | 0 | G | T | 37.5% | 43.6 / 16.7 | 48 | A225S (GCG→TCG) | mngA | PTS 2‑O‑a‑mannosyl‑D‑glycerate transporter subunit IIABC |
| Reads supporting (aligned to +/- strand): ref base G (22/8); new base T (18/0); total (40/8) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.82e-02 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
| Rejected as consensus: Frequency below/above cutoff threshold. | |||||||||||
GACAAGGGAGGCACGCAACCTTCTGCCTCTTTTTCCAACGCGCCAACTATCGTCTGCGTAACGGCCTGTCCGGCGGGTATTGCTCACACCTATATGGCTGCGGAATATCTGGAAAAAGCCGGACGCAAA‑CTCGGCGTAAATGTTTACGTTGAAAAACAAGGCGCTAACGGCATTGAAGGGCGTTTAACGGCGGATCAACTCAATAGTGC‑AACCGCCTGTA‑TTTTTGCGGCTGAAGTCGCCATCAAGGA‑GAGTGAGCGTTTTAAT‑GGCATTCCCGCGCTTTCAGTGCCTG‑TTGCCGAGCCGATTCGCCATGCAGAAGCGTTGATCCAACAAGCGCTTACCCTCAAGCGTAGCGATGAGACGCGTACCGTACAGCAAGATACGCAACCGGTGAAAAGTGTCAAAACGGAGCTGAAACAGGCACTGTTGAGCGGAATCTCTTTTGCCGTACCGTTGATTGTCGCGGGGGGCACGG > NZ_CP009273/761947‑762418 | gACAAGGGAGGCACGCAACCTTCTGCCTCTTTTTCCAACGCGCCAACTATCGTCTGCGTAACGGCCTGTCCGGCGGGTATTGCTCACACCTATATGGCTGCGGAATATCTGGAAAAAGCCGGACGCAAA‑CTCGACGTAAATGTTTACGTTGAAAAACAAGGCGCTAACGGCATTGAAGGGCGTTTAACGGCGGATCAACTCCAAAATGC‑AAACGCCTGTA‑TTTTTTTGGGTGAAGTCGCCCTCCAggg > 1:887069/1‑247 (MQ=255) aGGGAGGCACGCAACCTTCTGCCTCTTTTTCCAACGCGCCAACTATCGTCTGCGTAACGGCCTGTCCGGCGGGTATTGCTCACACCTATATGGCTGCGGAATATCTGGAAAAAGCCGGACGCAAA‑CTCGGCGTAAATGTTTACGTTGAAAAACAAGGCGCTAACGGCATTGAAGGGCGTTTAACGGCGGATCCAATCAATAGTGCAAACCCCCTG‑A‑TTTTTTTGGCTGGAGTCGGCCTCCAGga‑gggg > 2:223987/1‑245 (MQ=255) cTTCTGCCTCTTTTTCCAACGCGCCAACTATCGTCTGCGTAACGGCCTGTCCGGCGGGTATTGCTCACACCTATATGGCTGCGGAATATCTGGAAAAAGCCGGACGCAAA‑CTCGGCGTAAATGTTTACGTTGAAAAACAAGGCGCTAACGGCATTGAAGGGCGTTTAACGGCGGGATAACCCAATAGTGG‑AAACGCCCGGA‑TTTTTTCGGGGGGAGGCGCCATCAAGGA‑GAGGGTGCGTGTTTAttgagt > 2:308391/1‑245 (MQ=255) tCTGCCTCTTTTTCCAACGCGCCAACTATCGTCTGCGTAACGGCCTGTCCGGCGGGTATTGCTCACACCTATATGGCTGCGGAATATCTGGAAAAAGCCGGACGCAAA‑CTCGGCGTAAATGTTTACGTTGAAAAACAAGGCGCTAACGGCATTGAAGGGCGTTTAACGGCGGATCAACTCAATAGTGC‑AACCGCCTGTA‑TTTTTTTGGCTGGAGACGCCATCAAGGA‑GAGGGAGGGTTTTTAT‑GGGAttt > 1:554250/1‑249 (MQ=255) gCCTCTTTTTCCAACGCGCCAACTATCGTCTGCGTAACGGCCTGTCCGGCGGGTATTGCTCACACCTATATGGCTGCGGAATATCTGGAAAAAGCCGGACGCAAA‑CTCGGCGTAAATGTTTACGTTGAAAAACAAGGCGCTAACGGCATTGAAGGGCGTTTAGAGGCGGATACACACCACAGGGG‑AACCCCCCGGA‑TTTTTTGTGGTGAAGGCGCCAACAAGGG‑GGGGGAGGGGTTTAATAGGCAtctcc > 2:747315/1‑246 (MQ=255) ctctTTTTCCAACGCGCCAACTATCGTCTGCGTAACGGCCTGTCCGGCGGGTATTGCTCACACCTATATGGCTGCGGAATATCTGGAAAAAGCCGGACGCAAA‑CTCGGCGTAAATGTTTACGTTGAAAAACAAGGCGCTAACGGCATTGAAGGGCGTTTAACGGCGGATCAACTCAATAGTGC‑AAACCCCCGGA‑TTTTTTCGGCTGGAGGCGCCCTCAAGGA‑GAGTGAGCGGTTTTAT‑GGGATTTCcgcg > 1:421673/1‑250 (MQ=255) ctTTTTCCAACGCGCCAACTATCGTCTGCGTAACGGCCTGTCCGGCGGGTATTGCTCACACCTATATGGCTGCGGAATATCTGGAAAAAGCCGGACGCAAA‑CTCGGCGTAAATGTTTACGTTGAAAAACAAGGCGCTAACGGCATTGAAGGGCGTTTAACGGCGGGTCAAATCCAAAGTGC‑CAACCCCCGTA‑TTTTTTTGGGTGGAGGCGCCAGCCAGGG‑GAGTGGGGGGTTTTAT‑gggacttccccgcc > 2:408721/1‑238 (MQ=255) tCTGCGTAACGGCCTGTCCGGCGGGTATTGCTCACACCTATATGGCTGCGGAATATCTGGAAAAAGCCGGACGCAAA‑CTCGGCGTAAATGTTTACGTTGAAAAACAAGGCGCTAACGGCATTGAAGGGCGTTTAACGGCGGATCAACTCAATAGTGC‑AACCGCCTGTA‑TTTTTGCGGCTGGAGTCGCCATCAAGGA‑GAGTGAGCGGTTTTAT‑TGCATTCCCGCGCTTTCAGTGCCTG‑GTgccgagccggt > 1:331274/1‑248 (MQ=255) cTGCGTAACGGCCTGTCCGGCGGGTATTGCTCACACCTATATGGCTGCGGAATATCTGGAAAAAGCCGGACGCAAA‑CTCGGCGTAAATGTTTACGTTGAAAAACAAGGCGCTAACGGCATTGAAGGGCGTTTAACGGCGGATCAACTCAATAATGC‑AACCGCCTGTA‑TTTTTTCGGCTGAAGTCGCCATCAAGGG‑GAGGGAGGGTTTTAAT‑GGCATTCCCGCGCTTTCAGTGCCTG‑TTGCCGGGCCGAtt > 1:932124/1‑250 (MQ=255) gTAACGGCCTGTCCGGCGGGTATTGCTCACACCTATATGGCTGCGGAATATCTGGAAAAAGCCGGACGCAAA‑CTCGGCGTAAATGTTTACGTTGAAAAACAAGGCGCTAACGGCATTGAAGGGCGTTTAACGGCGGATCAAACCAAAAAAGC‑AAACGCCCGGG‑TTTTTTTGGGCGGAGGCGGCATCCAGGAGGGGGGGGGGTTTTATT‑GGAATTCCC‑CGCCTTTAGTGGCTG‑TTtgcgaggcgggtcggc > 2:817567/1‑243 (MQ=255) gTCCGGCGGGTATTGCTCACACCTATATGGCTGCGGAATATCTGGAAAAAGCCGGACGCAAA‑CTCGGCGTAAATGTTTACGTTGAAAAACAAGGCGCTAACGGCATTGAAGGGCGTTTAACGGCGGATCCACCCAATAGTGC‑AAACGCCTGGC‑TTTTTTTGGCTGGAGTCGGCCTCCAGGG‑GGGGGAGCGGTTTTAT‑GGCATTTCCGCGCTTTCCGTGCCTG‑TTGGCGAGGCGGTTTGCCATGCAGaaac > 2:339850/1‑248 (MQ=255) gcggGTATTGCTCACACCTATATGGCTGCGGAATATCTGGAAAAAGCCGGACGCAAA‑CTCGGCGTAAATGTTTACGTTGAAAAACAAGGCGCTAACGGCATTGAAGGGCGTTTAACGGCGGATCAACTCCACAAAGA‑CAACGCCCGTATTTTTTTGGGCGGAAG‑CGCCATCCAGGA‑GAGGGGGGGGGTTTAT‑TGCATTTCCCCCCTTTTCGTGCCTGTTTGCCGA‑CGGGTTCGCCACGCAGCAGCGGTGa > 2:662708/1‑250 (MQ=255) gtttATTGCACCCCCGTATATGGCTGGGATATTTC‑GGAAAAAGGCGGAAGGAAATCGCGGAATAATTGTTTCCTTAAAAAAACAGGGCGCAAGCGGTATGGGGGTGGTTTTATCGGGGGTCAAACTCAATAGGCC‑AACCGCCTGTA‑TTTTTGCGGCTGAAGTCGCCATCAAGGA‑GAGTGAGCGTTTTAAT‑GGCATTCCCGCGCTTTCAGTGCCTG‑TTGCCGAGCCGATTCGCCATGCAGAAGCGTTGATc < 2:771072/247‑1 (MQ=255) ggCTGCGGAATATCTGGAAAAAGCCGGACGCAAA‑CTCGGCGTAAATGTTTACGTTGAAAAACAAGGCGCTAACGGCATTGAAGGGCGTTTAACGGCGGATCAACTCAATAGTGC‑AACCGCCTGTA‑TTTTTTCGGCCGGAGGCGCCCTCAAGGA‑GAGGGAGCGGTTTTAT‑GGCCTTTCCGCGCTTTTCGTGCCTG‑TTGCCGCGCCCGTTCGCCCTGCAGAAGCGGTGGTTCAACAAGCGCTTACCCTCCAg > 2:627463/1‑250 (MQ=255) ggCTGCGGAATATCTGGAAAAAGCCGGACGCAAA‑CTCGGCGTAAATGTTTACGTTGAAAAACAAGGCGCTAACGGCATTGAAGGGCGTTTAACGGCGGATCAACTCAATAGTGC‑AACCGCCTGTA‑TTTTTGCGGCTGAAGTCGCCATCAAGGA‑GAGTGAGCGTTTTAAT‑GGCATTCCCGCGCTTTCAGTGCCTG‑TTGCCGAGCCGATTCGCCATGCAGAAGCGTTGATCCAACAAGCGCTTACCCTCAAg > 1:261411/1‑250 (MQ=255) gCGGAATATCTGGAAAAAGCCGGACGCAAA‑CTCGGCGTAAATGTTTACGTTGAAAAACAAGGCGCTAACGGCATTGAAGGGCGTTTAACGGCGGATCAACTCAATAGTGC‑AACCGCCTGTA‑TTTTTGCGGCTGAAGTCGCCATCAAGGA‑GAGGGAGCGTTTTAAT‑GGCATTCCCGCGCTTTCAGTGCCTG‑TTGCCGAGCCGATTCGCCATGCAGAAGCGTTGATCCAACAAGCGCTTACCCTCAAGCg > 1:934625/1‑248 (MQ=255) cGGAATATCTGGAAAAAGCCGGACGCAAA‑CTCGGCGTAAATGTTTACGTTGAAAAACAAGGCGCTAACGGCATTGAAGGGCGTTTAACGGCGGATCAACTCAATAGTGC‑AACCGCCTGTA‑TTTTTGCGGCTGAAGTCGCCATCAAGGA‑GAGTGAGCGTTTTAAT‑GGCATTTCCGCGCTTTCAGTGCCTG‑TTGCCGAGCCGATTCGCCATGCAGAAGCGTTGATCCAACAAGCGCTTACCCTCAAGCGTAg > 1:231729/1‑250 (MQ=255) aaTATCTGGAAAAAGCCGGACGCAAA‑CTCGGCGTAAATGTTTACGTTGAAAAACAAGGCGCTAACGGCATTGAAGGGCGTTTAACGGCGGATCAACTCAATAGTGC‑AACCGCCTGTA‑TTTTTGCGGCTGAAGTCGCCATCAAGGA‑GAGTGAGCGTTTTAAT‑GGCATTCCCGCGCTTTCAGTGCCTG‑TTGCCGAGCCGATTCGCCATGCAGAAGCGTTGATCCAACAAGCGCTTACCCTCAAGCGTAGCGa > 1:368478/1‑250 (MQ=255) atatCTGGAAAAAGCCGGACGCAAA‑CTCGGCGTAAATGTTTACGTTGAAAAACAAGGCGCTAACGGCATTGAAGGGCGTTTAACGGCGGATCAACTCAATAGTGC‑AACCGCCTGTA‑TTTTTGCGGCTGAAGTCGCCATCAAGGA‑GAGTGAGCGGTTTAAT‑GGCATTCCCGCGCTTTCAGTGCCTG‑TTGCCGAGCCGATTCGCCATGCAGAAGCGGTGATCCAACAAGCGCCTACCCTCCAGCGTAGCGAt > 1:5295/1‑250 (MQ=255) aaaaaGCCGGACGCAAA‑CTCGGCGTAAATGTTTACGTTGAAAAACAAGGCGCTAACGGCATTGAAGGGCGTTTAACGGCGGATCAACTCAATAGTGC‑AACCGCCTGTA‑TTTTTGCGGCTGAAGTCGCCATCAAGGA‑GAGTGAGCGTTTTTAT‑GGCATTCCCGCGCTTTCAGTGCCTG‑TTGCCGAGCCGATTCGCCATGCAGAAGCGGTGATCCAACAAGCGCTTACCCTCAAGCGGAGCGATGAGAcgcg > 1:171961/1‑250 (MQ=255) aaGCCGGACGCAAA‑CTCGGCGTAAATGTTTACGTTGAAAAACAAGGCGCTAACGGCATTGAAGGGCGTTTAACGGCGGATCAAATCAATAGAGC‑AACCCCCCGTA‑TTTTTTCGGCTGGAGACGCCATCAACGG‑GGGGGAGCGTTTTTAT‑GGCATTTCCTCGCTTTTTGTGCCTT‑TTTCCGGGACGGTTTTCCATGCAGAATCGTTCATCCAACAAACGCTTACCCCCCACCGTAGCGAGTAGAcgcgcat > 2:874352/1‑247 (MQ=255) gCCGGACGCAAA‑CTCGGCGTAAATGTTTACGTTGAAAAACAAGGCGCTAACGGCATTGAAGGGCGTTTAACGGCGGATCAACTCAATAGTGC‑AACCGCCTGTA‑TTTTTGCGGCTGAAGTCGCCATCAAGGA‑GAGTGAGCGTTTTAAT‑GGCATTCCCGCGCTTTCAGTGCCTG‑TTGCCGAGCCGATTCGCCATGCAGAAGCGTTGATCCAACAAGCGCTTACCCTCAAGCGTAGCGATGAGACGcggaccg > 1:234050/1‑250 (MQ=255) gCCGGACGCAAA‑CTCGGCGTAAATGTTTACGTTGAAAAACAAGGCGCTAACGGCATTGAAGGGCGTTTAACGGCGGATCAACTCAATAGTGC‑AACCGCCTGTA‑TTTTTGCGGCTGAAGTCGCCATCAAGGA‑GAGTGAGCGTCTTAAT‑GGCATTCCCGCGCTTTCAGTGCCTG‑TTGCCGAGCCGATTCGCCATGCAGAAGCGTTGATCCAACAAGCGCCTACCCTCAAACGCAGCGATGAGACGcgtaccg > 1:288965/1‑250 (MQ=255) ggACGCAAA‑CTCGGCGTAAATGTTTACGTTGAAAAACAAGGCGCTAACGGCATTGAAGGGCGTTTAACGGCGGATCAACTCAATAGTGC‑CACCGCCTGTA‑TTTTTTCGGCTGAAGTCGCCATCAAGGA‑GAGTGAGCGGTTTAAT‑GGCATTCCCGCGCTTTCAGTGCCTG‑TTGCCGAGCCGATTCGCCATGCAGAAGCGTTGATCCAACAAGCGCTTACCCTCAAGCGTAGCGATGAGACGcgtaccgta > 1:425912/1‑249 (MQ=255) aCGCAAA‑CTCGGCGTAAATGTTTACGTTGAAAAACAAGGCGCTAACGGCATTGAAGGGCGTTTAACGGCGGATCAACTCAATAGTGC‑AACCGCCTGTA‑TTTTTGCGGCTGAAGTCGCCATCAAGGA‑GAGTGAGCGTTTTAAT‑GGCATTCCCGCGCTTTCAGTGCCTG‑TTGCCGAGCCGATTCGCCCTGCAGAAGCGCTGATCCAACAAGCGCTTACCCTCAAGCGTAGCGATGAGACGCGTACCGGACAg > 1:750217/1‑250 (MQ=255) gTAAATGTTTACGTTGAAAAACAAGGCGCTAACGGCATTGAAGGGCGTTTAACGGCGGATCAACTCAATAGTGC‑AACCGCCTGTA‑TTTTTGCGGCTGAAGTCGCCATCAAGGA‑GAGTGAGCGGTTTTAT‑GGCATTCCCGCGCTTTCAGTGCCTG‑TTGCCGAGCCGATTCGCCATGCAGAAGCGTTGATCCAACAAGCGCTTACCCTCAAGCGTAGCGATGAGACGCGTACCGTACAGCAAGATACGCAAc > 1:692832/1‑250 (MQ=255) tAAATGTTTACGTTGAAAAACAAGGCGCTAACGGCATTGAAGGGCGTTTAACGGCGGATCAACTCAATAGTGC‑AACCGCCTGTA‑TTTTTTCGGCTGAAGTCGCCCTCAAAGG‑GAGGGAGCGGTTTTAT‑TGCATTTCCGCGCTTTTCGTGCCTG‑TTGCCGAGCCGATTCGCCCTGCAGAAACGGTTGTCCCACAAGCGCCTACCCCCCAGCGTAGCGATGAGAAGCGGACCGGACCGCCAGATAAGCCAcc > 2:254403/1‑250 (MQ=255) ttGAAAAACAAGGCGCTAACGGCATTGAAGGGCGTTTAACGGCGGATCAACTCAAAAGTGC‑AACCGCCTGTA‑TTTTTTCGGCTGAAGTCGCCATCAAGGA‑GAGTGAGCGGTTTTAT‑TGCATTCCCGCGCTTTCAGTGCCTG‑TTGCCGAGCCGATTTGCCCTGCAGAAACGGTTATCCCACAAACGCTTACCCTCCAACGTAGCGATGAGACCCCTACCGTACAACAAAATACACAACCGGGGAAAAgtg > 2:816557/1‑249 (MQ=255) aaaaCAAGGCGCTAACGGCATTGAAGGGCGTTTAACGGCGGCACAACTCAATAGTGT‑AACCGCCTGTT‑TTTTTGTGGCTGAAGTCGCCACCAAGGA‑GAGAGAGGGGTTTTAT‑TGGATTTCCGCGCCTTCTGTGCCCG‑TTGGCGGGCCCAATCGCCCTGCGCACACGTTGATCCAAAAAACGCGTACCCACAAACGGAGCGGTGTGAAGCCCAACGTACAGCCAGAAATGACACCGGGGaaaaattgcaa > 2:367104/1‑242 (MQ=255) aaaCAAGGCGCTAACGGCATTGAAGGGCGTTTAACGGCGGATCAACTCAATAGTGC‑AACCGCCTGTA‑TTTTTTCGGCTGAAGTCGCCATCAAGGA‑GAGGGAGCGTTTTTAT‑GGGATTTCCGCGCTTTTAGTGCCTG‑TTGCCGAGCCGATTCGCCCTGCAGAAGCGGTGATTCAACAAGCGCTTTCCCCCCAGCGTAGGGGTGAGAAGCGTACCCGACAGCAAGATACGCAACCGGTGGAAAggggccaa > 2:288721/1‑242 (MQ=255) aaGGCGCTAACGGCATTGAAGGGCGTTTAACGGCGGATCAACTCAATAGTGC‑AACCGCCTGTA‑TTTTTGCGGCTGAAGTCGCCATCAAGGA‑GAGTGAGCGTTTTAAT‑GGCATTCCCGCGCTTTCAGTGCCTG‑TTGCCGAGCCGATTCGCCATGCAGAAGCGTTGATCCAACAAGCGCTTACCCTCAAGCGTAGCGATGAGACGCGTACCGTACAGCAAGATACGCAACCGGGGAAAAGTGTCaaaaag > 1:517746/1‑246 (MQ=255) gcTAACGGCATTGAAGGGCGTTTAACGGCGGATCAACTCAATAGTGC‑AACCGCCTGTA‑TTTTTTCGGCTGAAGTCGCCATCAAGGA‑GAGTGAGCGTTTTAAT‑GGCATTCCCGCGCTTTCAGTGCCTG‑TTGCCGAGCCGATTCGCCATGCAGAAGCGTTGATCCAACAAGCGCTTACCCTCAAGCGTAGCGATGAGACGCGTACCGTACAGCAAGATACGCAACCGGTGAAAAGTGTCAAAACGGAGCTg > 1:640290/1‑249 (MQ=255) aaaCGTCATGGAGGGGCGTTAACGGGCGAACCAACAAAAAAGTCC‑AACCGCCTGTA‑TTTTTGCGGCTGAAGTCGCCATCAAGGA‑GAGTGAGCGTTTTAAT‑GGCATTCCCGCGCTTTCAGTGCCTG‑TTGCCGAGCCGATTCGCCATGCAGAAGCGTTGATCCAACAAGCGCTTACCCTCAAGCGTAGCGATGAGACGCGTACCGTACAGCAAGATACGCAACCGGTGAAAAGTGTCAAAACGGAGCTGaaa < 1:254403/249‑1 (MQ=255) gAAGGGCGTTTAACGGCGGATCAACTCAATAGTGC‑AACCGCCTGTA‑TTTTTGCGGCTGAAGTCGCCATCAAGGA‑GAGTGAGCGTTTTAAT‑GGCATTCCCGCGCTTTCAGTGCCTG‑TTGCCGAGCCGATTCGCCATGCAGAAGCGTTGATCCAACAAGCGCTTACCCTCAAGCGTAGCGATGAGACGCGTACCGTACAGCAAGATACGCAACCGGGGAAAAGTGTCAAAACGGAGCTGAAACAGGCACTGt > 1:449108/1‑250 (MQ=255) ggggTGTTAAACGGCGGATAAACAAAATAGTGA‑AACCGCCTGTA‑TTTTTGCGGCTGAAGTCGCCATCAAGGA‑GAGTGAGCGTTTTAAT‑GGCATTCCCGCGCTTTCAGTGCCTG‑TTGCCGAGCCGATTCGCCATGCAGAAGCGTTGATCCAACAAGCGCTTACCCTCAAGCGTAGCGATGAGACGCGTACCGTACAGCAAGATACGCAACCGGTGAAAAGTGTCAAAACGGAGCTGAAACAGGCACTGTTg < 2:368478/249‑1 (MQ=255) aCGGCGGATCAACTCAATAGTGC‑AACCGCCTGTA‑TTTTTGCGGCTGAAGTCGCCATCAAGGA‑GAGTGAGCGTTTTAAT‑GGCATTCCCGCGCTTTCAGTGCCTG‑TTGCCGAGCCGATTCGCCATGCAGAAGCGTTGATCCAACAAGCGCTTACCCTCAAGCGTAGCGATGAGACGCGTACCGTACAGCAAGATACGCAACCGGTGAAAAGTGTCAAAACGGAGCTGAAACAGGCACTGTTGAGCGGAAtct > 2:864407/1‑250 (MQ=255) aCGGCGGATCAACTCAATAGTGC‑AACCGCCTGTA‑TTTTTGCGGCTGAAGTCGCCATCAAGGA‑GAGGGAGCGTTTTAAT‑GGCATTCCCGCGCTTTCAGTGCCTG‑TTGCCGAGCCGATTCGCCATGCAGAAGCGGTGATCCCACAAGCGCTTACCCTCCAGCGTAGCGATGAGACGCGTAACGGACAGCAAGATACCCAACCGGGGAAAAGGGGCAAAAAGGAGGCGCAACAGGCACTGGTGAGGGGAAtct > 2:211552/1‑250 (MQ=255) cgtggaataaaCTAAATAGTGA‑AACCGCCTGTA‑TTTTTGCGGCTGAAGTCGCCATCAAGGA‑GAGTGAGCGTTTTAAT‑GGCATTCCCGCGCTTT‑AGTGCCTG‑TTGCCGAGCCGATTCGCCATGCAGAAGCGTTGATCCAACAAGCGCTTACCCTCAAGCGTAGCGATGAGACGCGTACCGTACAGCAAGATACGCAACCGGTGAAAAGTGTCAAAACGGAGCTGAAACAGGCACTGTTGAGCGGAATctct < 1:42231/241‑1 (MQ=255) cggATCAACTCAATAGTGC‑AACCGCCTGTA‑TTTTTGCGGCTGAAGTCGCCATCAAGGA‑GAGTGAGCGTTTTAAT‑GGCATTCCCGCGCTTTCAGTGCCTG‑TTGCCGAGCCGATTCGCCATGCAGAAGCGTTGATCCAACAAGCGCTTACCCTCAAGCGTAGCGATGAGACGCGTACCGTACAGCAAGATCCGCAACCGGTGAAAAGCGTCAAAACGCAGCCGAAACAGGCACTGTTGAGCGGAATGCCttt > 2:232485/1‑250 (MQ=255) cAATAGTGC‑AACCGCCTGTA‑TTTTTGCGGCTGAAGTCGCCATCAAGGA‑GAGTGAGCGTTTTAAT‑GGCATTCCCGCGCTTTCAGTGCCTG‑TTGCCGAGCCGATTCGCCATGCAGAAGCGTTGATCCAACAAGCGCTTACCCTCAAGCGTAGCGATGAGACGCGTACCGTACAGCAAGATACGCAACCGGTGAAAAGTGTCAAAACGGAGCTGAAACAGGCACTGTTGAGCGGAATCTCTTTTGCCGTACCg > 1:857445/1‑250 (MQ=255) agctccacccGCCTGTA‑TTTTTGCGGCTGAAGTCGCCATCAAGGA‑GAGTGAGCGTTTTAAT‑GGCATTCCCGCGCTTTCAGTGCCTG‑TTGCCGAGCCGATTCGCCATGCAGAAGCGTTGATCCAACAAGCGCTTACCCTCAAGCGTAGCGATGAGACGCGTACCGTACAGCAAGATACGCAACCGGTGAAAAGTGTCAGAACGGAGCTGAAACAGGCACTGTTGAGCGGAATCTCTTTTGCCGTACCGTTg < 2:569278/242‑1 (MQ=255) agtcaccccGCCTGTA‑TTTTTGCGGCTGAAGTCGCCATCAAGGA‑GAGTGAGCGTTTTAAT‑GGCATTCCCGCGCTTTCAGTGCCTG‑TTGCCGAGCCGATTCGCCATGCAGAAGCGTTGATCCAACAAGCGCTTACCCTCAAGCGTAGCGATGAGACGCGTACCGTACAGCAAGATACGCAACCGGTGAAAAGTGTCAAAACGGAGCTGAAACAGGCACTGTTGAGCGGAATCTCTTTTGCCGTACCGTTGa < 2:218954/243‑1 (MQ=255) gC‑AGCCGCCTGTA‑TTTTTGCGGCTGAAGTCGCCATCAAGGA‑GAGTGAGCGTTTTAAT‑GGCGTTCCCGCGCTTTCAGTGCCTG‑TTGCCGAGCCGATTCGCCATGCAGAAGCGTTGATCCAACAAGCGCTTACCCTCAAGCGTAGCGATGAGACGCGTACCGTACAGCAAGATACGCAACCGGTGAAAAGTGTCAAAACGGAGCTGAAACAGGCACTGTTGAGCGGAATCTCTTTTGCCGTACCGTTGATTg < 1:212962/250‑1 (MQ=255) gCCTGTA‑TTTTTGCGGCTGAAGTCGCCATCAAGGA‑GAGTGAGCGTTTTAAT‑GGCATTCCCGCGCTTTCAGTGCCTG‑TTGCCGAGCCGATTCGCCATGCAGAAGCGTTGATCCAACAAGCGCTTACCCTCAAGCGTAGCGATGAGACGCGTACCGTACAGCAAGATACGCAACCGGTGAAAAGTGTCAAAACGGAGCTGAAACAGGCACTGTTGAGCGGAATCTCTTTTGCCGTACCGTTGATTGTCGCgg > 2:58086/1‑250 (MQ=255) gCCTGTA‑TTTTTGCGGCTGAAGTCGCCATCAAGGA‑GAGTGAGCGTTTTAAT‑GGCATTCCCGCGCTTTCAGTGCCTG‑TTGCCGAGCCGATTCGCCATGCAGAAGCGTTGATCCAACAAGCGCTTACCCTCAAGCGTAGCGATGAGACGCGTACCGTACAGCAAGATACGCAACCGGTGAAAAGTGTCAAAACGGAGCTGAAACAGGCACTGTTGAGCGGAATCTCTTTTGCCGTACCGTTGATTGTCGCgg < 1:361839/250‑1 (MQ=255) tA‑TTTTTGCGGCTGAAGTCGCCATCAAGGA‑GAGTGAGCGTTTTAAT‑GGCATTCCCGCGCTTTCAGTGCCTG‑TTGCCGAGCCGATTCGCCATGCAGAAGCGTTGATCCAACAAGCGCTTACCCTCAAGCGTAGCGATGAGACGCGTACCGTACAGCAAGATACGCAACCGGTGAAAAGTGTCAAAACGGAGCTGAAACAGGCACTGTTGAGCGGAATCTCTTTTGCCGTACCGTTGATTGTCGCgggggg > 2:230876/1‑249 (MQ=255) ttttGCGGCTGAAGTCGCCATCAAGGA‑GAGTGAGCGTTTTAAT‑GGCATTCCCGCGCTTTCAGTGCCTG‑TTGCCGAGCCGATTCGCCATGCAGAAGCGTTGATCCAACAAGCGCTTACCCTCAAGCGTAGCGATGAGACGCGTACCGTACAGCAAGATACGCAACCGGTGAAAAGTGTCAAAACGGAGCTGAAACAGGCACTGTTGAGCGGAATCTCTTTTGCCGTACCGTTGATTGTCGCGGGGGGCACg > 2:603824/1‑250 (MQ=255) tttGCGGCTGAAGTCGCCATCAAGGA‑GAGTGAGCGTTTTAAT‑GGCATTCCCGCGCTTTCAGTGCCTG‑TTGCCGAGCCGATTCGCCATGCAGAAGCGTTGATCCAACAAGCGCTTACCCTCAAGCGTAGCGATGAGACGCGTACCGTACAGCAAGATACGCAACCGGTGAAAAGTGTCAAAACGGAGCTGAAACAGGCACTGTTGAGCGGAATCTCTTTTGCCGTACCGTTGATTGTCGCGGGGGGCACgg > 1:684589/1‑250 (MQ=255) | GACAAGGGAGGCACGCAACCTTCTGCCTCTTTTTCCAACGCGCCAACTATCGTCTGCGTAACGGCCTGTCCGGCGGGTATTGCTCACACCTATATGGCTGCGGAATATCTGGAAAAAGCCGGACGCAAA‑CTCGGCGTAAATGTTTACGTTGAAAAACAAGGCGCTAACGGCATTGAAGGGCGTTTAACGGCGGATCAACTCAATAGTGC‑AACCGCCTGTA‑TTTTTGCGGCTGAAGTCGCCATCAAGGA‑GAGTGAGCGTTTTAAT‑GGCATTCCCGCGCTTTCAGTGCCTG‑TTGCCGAGCCGATTCGCCATGCAGAAGCGTTGATCCAACAAGCGCTTACCCTCAAGCGTAGCGATGAGACGCGTACCGTACAGCAAGATACGCAACCGGTGAAAAGTGTCAAAACGGAGCTGAAACAGGCACTGTTGAGCGGAATCTCTTTTGCCGTACCGTTGATTGTCGCGGGGGGCACGG > NZ_CP009273/761947‑762418 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 26 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |