| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NZ_CP009273 | 1,170,082 | 0 | G | A | 36.4% | 111.6 / 17.9 | 67 | F180F (TTC→TTT) | ycfT | acyltransferase family protein |
| Reads supporting (aligned to +/- strand): ref base G (35/7); new base A (0/24); total (35/32) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 4.21e-12 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.83e-01 | |||||||||||
| Rejected as consensus: Frequency below/above cutoff threshold. | |||||||||||
CCGAATCGTTGCTCGTATTGATAAAACAGCTTCATGATCACCACAATCGATACCAGCGACAACAGCAGCGAGATAGTAAACAACCAGGCACCGACCGCCAGAACGGT‑AAGCAAAGAAGCCATCAGCAGATGGCGGCGCAACGGC‑ACCTCTTTAACACAGGTCATTATTGTTGCGCCAAACCATGCGCCAAGGCTGTAATAAGGCAAATTGCGGATCACACTGTTCATTCCCCACCACGGCGTGGGAACGAAATT‑AACCGCCACACTCAGCAGTACAAACAAGGCGAATAGTGGCAGCGCCAGACGGCTAAAAATTTTACATACCACGAAATAGACAATTAACGCATACAGATACCACAAGCTGGTGCTGGCGGTGATCATCCCGTGCAGGAACTCACCGGTGGAATCGGCATAAGCGGCATTGGAGGCATTGCTTAAATCGCGCTCAGGTGCCAGCCACTGGTTCAGCGCACTTAACGCCAGCCACTGCACCACGCC > NZ_CP009273/1169834‑1170330 | ccGAATCGTTGCTCGTATTGATAAAACAGCTTCATGATCACCACAATCGATACCAGCGACAACAGCAGCGAGATAGTAAACAACCAGGCACCGACCGCCAGAACGGT‑AAGCAAAGAAGCCATCAGCAGATGGCGGCGCAACGGC‑ACCTCTTTAACACAGGTCATTATTGTTGCGCCAAACCATGCGCCAAGGCTGTAATAAGGCAAATTGCGGATCACACTGTTCATTCCCCACCACGGCGTGGGAACGa < 1:886380/250‑1 (MQ=255) tCGTTGCTCGTATTGATAAAACAGCTTCATGATCACCACAATCGATACCAGCGACAACAGCAGCGAGATAGTAAACAACCAGGCACCGACCGCCAGAACGGT‑AAGCAAAGAAGCCATCAGCAGATGGCGGCGCAACGGC‑ACCTCTTTAACACAGGTCATTATTGTTGCGCCAAACCATGCGCCAAGGCTGTAATAAGGCAAATTGCGGATCACACTGTTCATTCCCCACCACGGCGTGGGAACGAAATT‑a < 2:350087/250‑1 (MQ=255) tCGTTGCTCGTATTGAAAAAACAGCTTCATGATCACCACAATCGATACCAGCGACAACAGCAGCGAGATAGTAAACAACCAGGCACCGACCGCCAGAACGGT‑AAGCAAAGAAGCCATCAGCAGATGGCGGCGCAACGGC‑ACCTCTTTAACACAGGTCATTATTGTTGCGCCAAACCATGCGCCAAGGCTGTAATAAGGCAAATTGCGGATCACACTGTTCATTCCCCACCACGGCGTGGGAACGAAATT‑a < 2:422065/250‑1 (MQ=255) cTCGTATTGATAAAACAGCTTCATGATCACCACAATCGATACCAGCGACAACAGCAGCGAGATAGTAAACAACCAGGCACCGACCGCCAGAACGGT‑AAGCAAAGAAGCCATCAGCAGATGGCGGCGCAACGGC‑ACCTCTTTAACACAGGTCATTATTGTTGCGCCAAACCATGCGCCAAGGCTGTAATAAGGCAAATTGCGGATCACACTGTTCATTCCCCACCACGGCGTGGGAACGAAATT‑AACCGc > 2:277314/1‑249 (MQ=255) cTCGTATTGATAAAACAGCTTCATGATCACCACAATCGATACCAGCGACAACAGCAGCGAGATAGTAAACAACCAGGCACCGACCGCCAGAACGGT‑AAGCAAAGAAGCCATCAGCAGATGGCGGCGCAACGGC‑ACCTCTTTAACACAGGTCATTATTGTTGCGCCAAACCATGCGCCAAGGCTGTAATAAGGCAAATTGCGGATCACACTGTTCATTCCCCACCACGGCGTGGGAACGAAATT‑AACCGc > 1:294638/1‑249 (MQ=255) tATTGATAAAACAGCTTCATGATCACCACAATCGATACCAGCGACAACAGCAGCGAGATAGTAAACAACCAGGCACCGACCGCCAGAACGGT‑AAGCAAAGAAGCCATCAGCAGATGGCGGCGCAACGGC‑ACCTCTTTAACACAGGTCATTATTGTTGCGCCAAACCATGCGCCAAGGCTGTAATAAGGCAAATTGCGGATCACACTGTTCATTCCCCACCACGGCGTGGGAACGAAATT‑AACCGCCacac > 1:92567/1‑250 (MQ=255) cATGATCACCACAATCGATACCAGCGACAACAGCAGCGAGATAGTAAACAACCAGGCACCGACCGCCAGAACGGT‑AAGCAAAGAAGCCATCAGCAGATGGCGGCGCAACGGC‑ACCTCTTTAACACAGGTCATTATTGTTGCGCCAAACCATGCGCCAAGGCTGTAATAAGGCAAATTGCGGATCACACTGTTCATTCCCCACCACGGCGTGGGAACGAAATT‑AACCGCCACACTCAGCAGTACAAACAAg > 1:372283/1‑250 (MQ=255) aTCACCACAATCGATACCAGCGACAACAGCAGCGAGATAGTAAACAACCAGGCACCGACCGCCAGAACGGT‑AAGCAAAGAAGCCATCAGCAGATGGCGGCGCAACGGC‑ACCTCTTTAACACAGGTCATTATTGTTGCGCCAAACCATGCGCCAAGGCTGTAATAAGGCAAATTGCGGATCACACTGTTCATTCCCCACCACGGCGTGGGAACGAAATT‑AACCGCCACACTCAGCAGTACAAACAAGGCg > 1:890042/1‑249 (MQ=255) tCACCACAATCGATACCAGCGACAACAGCAGCGAGATAGTAAACAACCAGGCACCGACCGCCAGAACGGT‑AAGCAAAGAAGCCATCAGCAGATGGCGGCGCAACGGC‑ACCTCTTTAACACAGGTCATTATTGTTGCGCCAAACCATGCGCCAAGGCTGTAATAAGGCAAATTGCGGATCACACTGTTCATTCCCCACCACGGCGTGGGAACGAAATT‑AACCGCCACACTCAGCAGTACAAACAAGGCGaa > 1:506772/1‑250 (MQ=255) ccacAATCGATACCAGCGACAACAGCAGCGAGATAGTAAACAACCAGGCACCGACCGCCAGAACGGT‑AAGCAAAGAAGCCATCAGCAGATGGCGGCGCAACGGC‑ACCTCTTTAACACAGGTCATTATTGTTGCGCCAAACCATGCGCCAAGGCTGTAATAAGGCAAATTGCGGATCACACTGTTCATTCCCCACCACGGCGTGGGAACGAAATT‑AACCGCCACACTCAGCAGTACAAACAAGGCGAATAg > 2:604050/1‑250 (MQ=255) acaATCGATACCAGCGACAACAGCAGCGAGATAGTAAACAACCAGGCACCGACCGCCAGAACGGT‑AAGCAAAGAAGCCATCAGCAGATGGCGGCGCAACGGC‑ACCTCTTTAACACAGGTCATTATTGTTGCGCCAAACCATGCGCCAAGGCTGTAATAAGGCAAATTGCGGATCACACTGTTCATTCCCCACCACGGCGTGGGAACGAAATT‑AACCGCCACACTCAGCAGTACAAACAAGGCGAATAGTg > 2:582701/1‑250 (MQ=255) gATACCAGCGACAACAGCAGCGAGATAGTAAACAACCAGGCACCGACCGCCAGAACGGT‑AAGCAAAGAAGCCATCAGCAGATGGCGGCGCAACGGC‑ACCTCTTTAACACAGGTCATTATTGTTGCGCCAAACCATGCGCCAAGGCTGTAATAAGGCAAATTGCGGATCACACTGTTCATTCCCCACCACGGCGTGGGAACGAAATT‑AACCGCCACACTCAGCAGTACAAACAAGGCGAATAGTGGCAgcg > 2:573858/1‑250 (MQ=255) accggagACAACACAAGAGAAAAAGAAAACAACCAGCCACCGCCAGCAAGACCGGA‑AAAAAAAAAAACAAAAAGAAGAGGGGGGCGAACCGGC‑CCCTCTTAAACAAAGGTGATAATTGTCGCCCCAAACTATGCGCCAAGGCTGAAAAAAGGCAATTGGCGGCTCCCCCTTTTATTCCCCCCCCACGGCGTGGGAACAAATTT‑AACCGCCACACTCAGCAGTACAAACAAGGCGAATAGTGGCAGCGCCa < 2:878455/244‑1 (MQ=255) agcagcGAGATAGTAAACAACCAGGCACCGACCGCCAGAACGGT‑AAGCAAAGAAGCCATCAGCAGATGGCGGCGCAACGGC‑ACCTCTTTAACACAGGTCATTATTGTTGCGCCAAACCATGCGCCAAGGCTGTAATAAGGCAAATTGCGGATCACACTGTTCATTCCCCACCACGGCGTGGGAACGAAATT‑AACCGCCACACTCAGCAGTACAAACAAGGCGAATAGTGGCAGCGCCAGACGGCTaaaaa > 1:834673/1‑250 (MQ=255) aggggaaaTAGAAAACACCCAGGCACCGACCGCAAGACGGGT‑AAGAAAAGAAGCAATCAGCAGATGGCGGCGCAACGCC‑ACCTCTTAAACACAGGTCATTATTGTTGCGCCAAACCATGCGCAAAGGCTGAAAAAAGGCAAATGGCGGATCACACTGTTCATCCCCCACCAGGGCGTGGAAACAAAATT‑AACCGCCACACTCAGCAGTACAAACAAGGCGAATAGTGGCAGCGCCAGACGGCTAAAAAtt < 2:315714/243‑1 (MQ=255) agcGAGATAGTAAACAACCAGGCACCGACCGCCAGAACGGT‑AAGCAAAGAAGCCATCAGCAGATGGCGGCGCAACGGC‑ACCTCTTTAACACAGGTCATTATTGTTGCGCCAAACCATGCGCCAAGGCTGTAATAAGGCAAATTGCGGATCACACTGTTCATTCCCCACCACGGCGTGGGAACGAAATT‑AACCGCCACACTCAGCAGTACAAACAAGGCGAATAGTGGCAGCGCCAGACGGCTAAAAAttt > 1:967245/1‑250 (MQ=255) gagaTAGTAAACAACCAGGCACCGACCGCCAGAACGGT‑AAGCAAAGAAGCCATCAGCAGATGGCGGCGCAACGGC‑ACCTCTTTAACACAGGTCATTATTGTTGCGCCAAACCATGCGCCAAGGCTGTAATAAGGCAAATTGCGGATCACACTGTTCATTCCCCACCACGGCGTGGGAACGAAATT‑AACCGCCACACTCAGCAGTACAAACAAGGCGAATAGTGGCAGCGCCAGACGGCTAAAAATTTTa > 1:829931/1‑249 (MQ=255) atgaaaaaaaaCGAGGCCGCCACCGCCAGAGGGGG‑AAGCAAACAGGCCATCAGCGGAGGGGGGCGCAACGGC‑ACCTCTTTAACACAGGTCATTATTGTTGCGCAAACCCATGCGCAGAGGCTAAAATAGGGAAAATCGCGACTCACACTGTTCTTTCCCCACCACGGCGT‑GGAAAGAAATTAAACCGCCACACTCAGCAGTACAAACAAGGCGAATAGTGGCAGCGCCAGACGGCTAAAAATTTTACATa < 2:82066/245‑1 (MQ=255) caacCAGGCACCGACCGCCAGAACGGT‑AAGCAAAGAAGCCATCAGCAGATGGCGGCGCAACGGC‑ACCTCTTTAACACAGGTCATTATTGTTGCGCCAAACCATGCGCCAAGGCTGTAATAAGGCAAATTGCGGATCACACTGTTCATTCCCCACCACGGCGTGGGAACGAAATT‑AACCGCCACACTCAGCAGTACAAACAAGGCGAATAGTGGCAGCGCCAGACGGCTAAAAATTTTACATACCACGaaa > 1:477579/1‑250 (MQ=255) caacCAGGCACCGACCGCCAGAACGGT‑AAGCAAAGAAGCCATCAGCAGATGGCGGCGCAACGGC‑ACCTCTTTAACACAGGTCATTATTGTTGCGCCAAACCATGCGCCAAGGCTGTAATAAGGCAAATTGCGGATCACACTGTTCATTCCCCACCACGGCGTGGGAACGAAATT‑AACCGCCACACTCAGCAGTACAAACAAGGCGAATAGTAGCAGCGCCAGACGGCTAAAAATTTTACATACCACGaaa > 2:522090/1‑250 (MQ=255) cccccgcccgcCAGAACGGT‑AAGCAAAGAAGCCATCAGCAGATGGCGGCGCAACGGC‑CCCTTTTAAACACAGGTCATTATTGTTGCGCCAAACCATGCGCAAAGGCTGTAATAAGGCAAATTGCGGATCACACTGTTCATCCCCCCCCACGGCGGGGAAACAAAATT‑AACCGCCACACTCAGCAGTACAAACAAGGCGAATAGTGGCAGCGCCAGACGGCTAAAAATTTTACATACCACGAAATAGACaa < 1:541034/247‑1 (MQ=255) ccgaccgCCAGAACGGT‑AAGAAAAGAAGCCATCAGCAGATGGCGGCGCAACGGC‑ACCTTTTAACCACAGGTCATTATTGTTGCGCAAAACCAGGCGCCAAGGCTGAAAAAAGGAAAATTGCGGATCACACTGTTCATCCCCCCCCACGGCGTGGAAACAAAATT‑AACCGCCACACTCAGCAGTACAAACAAGGCGAATAGTGGCAGCGCCAGACGGCTAAAAATTTTACATACCACGAAATAGACAATTa < 1:492292/250‑1 (MQ=255) cgaccgCCAGAACGGT‑AAGCAAAGAAGCCATCAGCAGATGGCGGCGCAACGGC‑ACCTCTTTAACACAGGTCATTATTGTTGCGCCAAACCATGCGCCAAGGCTGTAATAAGGCAAATTGCGGATCACACTGTTCATTCCCCACCACGGCGTGGGAACGAAATT‑AACCGCCACACTCAGCAGTACAAACAAGGCGAATAGTGGCAGCGCCAGACGGCTAAAAATTTTACATACCACGAAATAGACAATTaa > 2:631568/1‑250 (MQ=255) gaccgCCAGAACGGT‑AAGCAAAGAAGCCATCAGCAGATGGCGGCGCAACGGC‑ACCTCTTTAACACAGGTCATTATTGTTGCGCCAAACCATGCGCCAAGGCTGTAATAAGGCAAATTGCGGATCACACTGTTCATTCCCCACCACGGCGTGGGAACGAAATT‑AACCGCCACACTCAGCAGTACAAACAAGGCGAATAGTGGCAGCGCCAGACGGCTAAAAATTTTACATACCACGAAATAGACAATTAAc > 1:76559/1‑250 (MQ=255) cAGAACGGT‑AAGCAAAGAAGCCATCAGCAGATGGCGGCGCAACGGC‑ACCTCTTTAACACAGGTCATTATTGTTGCGCCAAACCATGCGCCAAGGCTGTAATAAGGCAAATTGCGGATCACACTGTTCATTCCCCACCACGGCGTGGGAACGAAATT‑AACCGCCACACTCAGCAGTACAAACAAGGCGAATAGTGGCAGCGCCAGACGGCTAAAAATTTTACATACCACGAAATAGACAATTAACGCATa > 1:262289/1‑249 (MQ=255) aGAACGGT‑AAGCAAAGAAGCCATCAGCAGATGGCGGCGCAACGGC‑ACCTCTTTAACACAGGTCATTATTGTTGCGCCAAACCATGCGCCAAGGCTGTAATAAGGCAAATTGCGGATCACACTGTTCATTCCCCACCACGGCGTGGGAACGAAATT‑AACCGCCACACTCAGCAGTACAAACAAGGCGAATAGTGGCAGCGCCAGACGGCTAAAAATTTTACATACCACGAAATAGACAATTAACGCATa > 1:766622/1‑248 (MQ=255) aGAACGGT‑AAGCAAAGAAGCCATCAGCAGATGGCGGCGCAACGGC‑ACCTCTTTAACACAGGTCATTATTGTTGCGCCAAACCATGCGCCAAGGCTGTAATAAGGCAAATTGCGGATCACACTGTTCATTCCCCACCACGGCGTGGGAACGAAATT‑AACCGCCACACTCAGCAGTACAAACAAGGCGAATAGTGGCAGCGCCAGACGGCTAAAAATTTTACATACCACGAAATAGACAATTAACGCATa > 1:425334/1‑248 (MQ=255) aaCGGTAAACCAAAGAAGCCATCAGCGGCGGGCGGGCCACCGCC‑ACTTTTTAAAAACAGGTCTTTATTGTGCCCCCAACCCAGGCCCAAAGGCTGAAAAAAGGAAAATGGCGGATCCCACTGTTCATCCCCCCCCCCGGCGTGGAAACAAAATA‑AACCGCCACACTCAGCAGTACAAACAAGGCGAATAGTGGCAGCGCCAGACGGCTAAAAATTTTACATACCACGAAATAGACAATTAACGCATACAg < 2:939806/250‑1 (MQ=255) aaCGGT‑AAGCAAAGAAGCCATCAGCAGATGGCGGCGCAACGGC‑ACCTCTTTAACACAGGTCATTATTGTTGCGCCAAACCATGCGCCAAGGCTGTAATAAGGCAAATTGCGGATCACACTGTTCATTCCCCACCACGGCGTGGGAACGAAATT‑AACCGCCACACTCAGCAGTACAAACAAGGCGAATAGTGGCAGCGCCAGACGGCTAAAAATTTTACATACCACGAAATAGACAATTAACGCATa > 1:271235/1‑246 (MQ=255) ccGGA‑AAGCAAAGAAGCCATAAGCAGATGGCGGCGCAACGGC‑ACCTCTTTAAAACAGGTCATTATTGTGGCGCCAAACCAGGCGCAAAGGCTATAAAAAGGCAAATGGCGGATCACACTTTTCATTCCCCACCACGGCGTGGAAACAAAATT‑AACCGCCACACTCAGCAGTACAAACAAGGCGAATAGTGGCAGCGCCAGACGGCTAAAAATTTTACATACCACGAAATAGACAATTAACGCATACAGAt < 2:152502/249‑1 (MQ=255) aGCAAAGAAGCCATCAGCAGATGGCGGCGCAACGGC‑ACCTCTTTAACACAGGTCATTATTGTTGCGCCAAACCATGCGCCAAGGCTGTAATAAGGCAAATTGCGGATCACACTGTTCATTCCCCACCACGGCGTGGGAACGAAATT‑AACCGCCACACTCAGCAGTACAAACAAGGCGAATAGTGGCAGCGCCAGACGGCTAAAAATTTTACATACCACGAAATAGACAATTAACGCATACAGATACcac > 2:42413/1‑249 (MQ=255) aaaaaaGCCACCAGAAGAGGGCGGCGC‑ACGGCAACCTTTTAAACACAGTTCATTATTGTGGCGCAAACCCATCCCCAAAGGTATAAAAAAGAAAAATGGCGGACCACCCTTTTCATCCCCCCCCACGGCGGGGAAACAAAATT‑AACCGCCACACTCAGCAGTACAAACAAGGCGAATAGTGGCAGCGCCAGACGGCTAAAAATTTTACATACCACGAAATAGACAATTAACGCATACAGATACCACAAGc < 2:967781/250‑1 (MQ=255) aagaagCCATCAGCAGATGGCGGCGCAACGGC‑ACCTCTTTAACACAGGTCATTATTGTTGCGCCAAACCATGCGCCAAGGCTGTAATAAGGCAAATTGCGGATCACACTGTTCATTCCCCACCACGGCGTGGGAACGAAATT‑AACCGCCACACTCAGCAGTACAAACAAGGCGAATAGTGGCAGCGCCAGACGGCTAAAAATTTTACATACCACGAAATAGACAATTAACGCATACAGATACCACAAGCt > 1:152788/1‑250 (MQ=255) agaagCCATCAGCAGATGGCGGCCAAACGCC‑CCCTCTTTAACACAGGTCATTTTTGTGGCCCAAAACCATGCGCAAGGGCGGAAATAAGGCAAATTGCGGACCACCCTGTTCATCCCCCCCCCCGGCGGGGGAAAAAAATT‑AACCGCCACACTCAGCAGTACAAACAAGGCGAATAGTGGCAGCGCCAGACGGCTAAAAATTTTACATACCACGAAATAGACAATTAACGCATACAGATACCACAAGCTg < 2:792937/250‑1 (MQ=255) ccATCAGCAGATGGCGGCGCAACGGC‑ACCTCTTTAACACAGGTCATTATTGTTGCGCCAAACCATGCGCCAAGGCTGTAATAAGGCAAATTGCGGATCACACTGTTCATTCCCCACCACGGCGTGGGAACGAAATT‑AACCGCCACACTCAGCAGTACAAACAAGGCGAATAGTGGCAGCGCCAGACGGCTAAAAATTTTACATACCACGAAATAGACAATTAACGCATACAGATACCACAAGCTGGTGCt > 1:606884/1‑250 (MQ=255) cATCAGCAGAGGGCGGCGCACCGGC‑ACCTCTTAAACACAGGTATTTATTGTTGCCCAAACCCAGGCCCAAAGGCTGTAATAAGGAAAATTGCGGATCACCCTTTTCATCCCCCCCCCCGGCGTGGAAACAAAATT‑AACCGCCACACTCAGCAGTACAAACAAGGCGAATAGTGGCAGCGCCAGACGGCTAAAAATTTTACATACCACGAAATAGACAATTAACGCATACAGATACCACAAGCTGGTGCTg < 1:324728/250‑1 (MQ=255) agcagATGGCGGCGCAACGGC‑CCCTCTTTAACACAGGTCATTATTGTTGCGCCAAACCATGCCCCAAGGCTGTAATAAGGCAAATTGCGGATCACACTGTTCATCCCCCCCCCCGGCGTGGAAACAAAATT‑AACCGCCACACTCAGCAGTACAAACAAGGCGAATAGTGGCAGCGCCAGACGGCTAAAAATTTTACATACCACGAAATAGACAATTAACGCATACAGATACCACAAGCTGGTGCTGGCgg < 1:922013/250‑1 (MQ=255) tGGCGGCGCAACGGC‑CCCTCTTTAACACAGGTCATTATTGTTGCGCCAAACCATGCGCCAAGGCTGTAATAAGGCAAATTGCGGATCACACTTTTCATCCCCCCCCACGGCGTGGGAACAAAATT‑AACCGCCACACTCAGCAGTACAAACAAGGCGAATAGTGGCAGCGCCAGACGGCTAAAAATTTTACATACCACGAAATAGACAATTAACGCATACAGATACCACAAGCTGGTGCTGGCGGTGatca < 1:277314/250‑1 (MQ=255) cgcAACGGC‑CCCTTTTTAACCCAGTTCTTTTTTTTTGCGCCAACCCATGCGCCAAGGCTGTAATAAGGCAAATTGCGGATCACCCTTTTCATCCCCCCCCACGGCGGGGGAACGAAATT‑AACCGCCACACTCAGCAGTACAAACAAGGCGAATAGTGGCAGCGCCAGACGGCTAAAAATTTTACATACCACGAAATAGACAATTAACGCATACAGATACCACAAGCTGGTGCTGGCGGTGATCATCCCGt < 1:559714/250‑1 (MQ=255) cAACGGC‑ACCTCTTTAACACAGGTCATTATTGTTGCGCCAAACCATGCGCCAAGGCTGTAATAAGGCAAATTGCGGATCACACTGTTCATTCCCCACCACGGCGTGGGAACGAAATT‑AACCGCCACACTCAGCAGTACAAACAAGGCGAATAGTGGCAGCGCCAGACGGCTAAAAATTTTACATACCACGAAATAGACAATTAACGCATACAGATACCACAAGCTGGTGCTGGCGGTACTTATCCCgcgc > 2:246234/1‑250 (MQ=255) gC‑ACCTCTTTAACACAGGTCATTATTGTTGCGCCAACCCAGGCGCAAAGGCTGTAATAAGGAAAATTGCGGATCCCCCTTTTCATCCCCCCCCACGGCGTGGAAACAAAATA‑AACCGCCACACTCAGCAGTACAAACAAGGCGAATAGTGGCAGCGCCAGACGGCTAAAAATTTTACATACCACGAAATAGACAATTAACGCATACAGATACCACAAGCTGGTGCTGGCGGTGATCATCCCGTGCAGGaa < 1:926324/250‑1 (MQ=255) gccccTCTTAAACCCAGGTAATTATTGTTGCCCCAACCCAGGCGCCAGGGCTTTAAAAAGGCAAATTGCGGATCACCTTTTTCATCCCCCCCCCCGGCGTGGGAACGAAATA‑ACCCGCCACACTCAGCAGTACAAACAAGGCGAATAGTGGCAGCGCCAGACGGCTAAAAATTTTACATACCACGAAATAGACAATTAACGCATACAGATACCACAAGCTGGTGCTGGCGGTGATCATCCCGTGCAGGaa < 1:912086/247‑1 (MQ=255) aCCTCTTTAACACAGGTCATTATTGTTGCGCCAAACCATGCGCCAAGGCTGTAATAAGGCAAATTGCGGATCACACTGTTCATTCCCCACCACGGCGTGGGAACGAAATT‑AACCGCCACACTCAGCAGTACAAACAAGGCGAATAGTGGCAGCGCCAGACGGCTAAAAATTTTACATACCACGAAATAGACAATTAACGCATACAGATACCACAAGCTGGTGCTGGCGGTGATTATCCCCCGCCGGAACt > 2:676814/1‑250 (MQ=255) ctttgtAACACAGTTCATGATGGTTGCGCCAACCCATCCGCCAGGGCTGTAAAAGGGCAAATTGCGGATCCCACGGTTCCTCCCCCACCACGGCGTGAGAACAAAATT‑AACCGCCACACTCAGCAGTACAAACAAGGCGAATAGTGGCAGCGCCAGACGGCTAAAAATTTTACATACCACGAAATAGACAATTAACGCATACAGATACCACAAGCTGGTGCTGGCGGTGATCATCCCGTGCAGGAACTCa < 2:294874/245‑1 (MQ=255) ctcttgacaacaGTTCTTTATTGTTCCCCAAAACAATGCCCCAAGGTTGTAAAAAGGAAAATGGCGAATCACCTTGTTCATCCCCCCCCCCGGCGGGGAAACAAAATA‑AACCGCCACACTCAGCAGTACAAACAAGGCGAATAGTGGCAGCGCCAGACGGCTAAAAATTTTACATACCACGAAATAGACAATTAACGCATACAGATACCACAAGCTGGTGCTGGCGGTGATCATCCCGTGCAGGAACTCa < 2:439311/241‑1 (MQ=255) tctTTAACACAGGTCATTATTGTTGCGCCAAACCATGCGCCAAGGCTGTAATAAGGCAAATTGCGGATCACACTGTTCATTCCCCACCACGGCGTGGGAACGAAATT‑AACCGCCACACTCAGCAGTACAAACAAGGCGAATAGTGGCAGCGCCAGACGGCTAAAAATTTTACATACCACGAAATAGACAATTAACGCATACAGATACCACAAGCTGGTGCTGGCGGTGATCATCCCGTGCAGGAACTCAc > 1:511771/1‑250 (MQ=255) aaCACAGGTCATTATTGTTGCGCAAAACCATGCGCCAAGGCTGTAATAAGGCAAATGGCGGATCCCACTGTTCATCCCCCCCCACGGCGTGGGAACAAAATT‑AACCGCCACACTCAGCAGTACAAACAAGGCGAATAGTGGCAGCGCCAGACGGCTAAAAATTTTACATACCACGAAATAGACAATTAACGCATACAGATACCACAAGCTGGTGCTGGCGGTGATCATCCCGTGCAGGAACTCACCGGTg < 1:751668/250‑1 (MQ=255) aaCACAGGTAATTATTGTTGCGCAAACCCATGCGCCAAGGCTTTAATAAGGAAAATTGCGGATCACACTGTTCATTCCCCCCCACGGCGGGGGAACGAAATT‑AACCGCCACACTCAGCAGTACAAACAAGGCGAATAGTGGCAGCGCCAGACGGCTAAAAATTTTACATACCACGAAATAGACAATTAACGCATACAGATACCACAAGCTGGTGCTGGCGGTGATCATCCCGTGCAGGAACTCACCGGt < 1:653739/249‑1 (MQ=255) caGGTCATTATTGTTGCGCAAAACCATGCGCAAAGGCTGTAATAAGGAAAATTGCGGATCACACTTTTCATCCCCCCCCACGGCGGGGAAACAAAATT‑AACCGCCACACTCAGCAGTACAAACAAGGCGAATAGTGGCAGCGCCAGACGGCTAAAAATTTTACATACCACGAAATAGACAATTAACGCATACAGATACCACAAGCTGGTGCTGGCGGTGATCATCCCGTGCAGGAACTCACCGGTGGAAt < 1:160608/250‑1 (MQ=255) ttgCCCCAACCCAGGCGCAAAGGTTGAAAAAGGGAAAATGGCGGATCACACTTTTCATCCCCCCCCCCGGCGGGGAAAAAAAATT‑AACCGCCACACTCAGCAGTACAAACAAGGCGAATAGTGGCAGCGCCAGACGGCTAAAAATTTTACATACCACGAAATAGACAATTAACGCATACAGATACCACAAGCTGGTGCTGGCGGTGATCATCCCGTGCAGGAACTCACCGGTGGAATCGGCATAAGCGGc < 1:569100/250‑1 (MQ=255) cAAGGCTGTAATAAGGCAAATTGCGGATCACACTGTTCATTCCCCACCACGGCGTGGGAACGAAATT‑AACCGCCACACTCAGCAGTACAAACAAGGCGAATAGTGGCAGCGCCAGACGGCTAAAAATTTTACATACCACGAAATAGACAATTAACGCATACAGATACCACAAGCTGGTGCTGGCGGTGGACATCCCGTGCAGGGACTCACCGGGGGGAACGGCATAAGCGGCATTGGAGGGATTGTTTa > 2:613931/1‑249 (MQ=255) cAAGGCTGTAATAAGGCAAATTGCGGATCACACTGTTCATTCCCCACCACGGCGTGGGAACGAAATT‑AACCGCCACACTCAGCAGTACAAACAAGGCGAATAGTGGCAGCGCCAGACGGCTAAAAATTTTACATACCACGAAATAGACAATTAACGCATACAGATACCACAAGCTGGTGCTGGCGGTGATCATCCCGTGCAGGAACTCACCGGTGGAATCGGCATAAGCGGCATTGGAGGCATTGCTTa > 1:176322/1‑249 (MQ=255) aGGCTATAAAAAGACAAATGGCGGACCACACTGTTCTTCCCCCCCCACGGCGTGGAAAAAAAATA‑AACCGCCACACTCAGCAGTACAAACAAGGCGAATAGTGGCAGCGCCAGACGGCTAAAAATTTTACATACCACGAAATAGACAATTAACGCATACAGATACCACAAGCTGGTGCTGGCGGTGATCATCCCGTGCAGGAACTCACCGGTGGAATCGGCATAAGCGGCATTGGAGGCATTGCTTAAAt < 2:419907/250‑1 (MQ=255) ggCTGAAAAAAGGAAAATGGCGGATCACACTGTTCATCCCCCCCCACGGGGTGGAAACAAAATA‑AACCGCCACACTCAGCAGTACAAACAAGGCGAATAGTGGCAGCGCCAGACGGCTAAAAATTTTACATACCACGAAATAGACAATTAACGCATACAGATACCACAAGCTGGTGCTGGCGGTGATCATCCCGTGCAGGAACTCACCGGTGGAATCGGCATAAGCGGCATTGGAGGCATTGCTTAAATc < 1:82323/250‑1 (MQ=255) tGTAATAAGGCAAATTGCGGATCACACTGTTCATTCCCCACCACGGCGTGGGAACGAAATT‑AACCGCCACACTCAGCAGTACAAACAAGGCGAATAGTGGCAGCGCCAGACGGCTAAAAATTTTACATACCACGAAATAGACAATTAACGCATACAGATACCACAAGCTGGTGCTGGCGGTGATCATCCCGTGCAGGAACTCACCGGTGGAATCGGCATAAGCGGCATTGGAGGCATTGCTTAAATcgcg > 1:266497/1‑250 (MQ=255) taaGGCAAATTGCGGATCACACTGTTCATTCCCCACCACGGCGTGGGAACGAAATT‑AACCGCCACACTCAGCAGTACAAACAAGGCGAATAGTGGCAGCGCCAGACGGCTAAAAATTTTACATACCACGAAATAGACAATTAACGCATACAGATACCACAAGCTGGTGCTGGCGGTGATCATCCCGTGCAGGAACTCACCGGTGGAATCGGCATAAGCGGCATTGGAGGCATTGCTTAAATCGCGCTCAg > 1:547498/1‑250 (MQ=255) aaaTGGCGGATCCCACTGTTCATCCCCCACCACGGGGTGGAAACAAAATT‑AACCGCCACACTCAGCAGTACAAACAAGGCGAATAGTGGCAGCGCCAGACGGCTAAAAATTTTACATACCACGAAATAGACAATTAACGCATACAGATACCACAAGCTGGTGCTGGCGGTGATCATCCCGTGCAGGAACTCACCGGTGGAATCGGCATAAGCGGCATTGGAGGCATTGCTTAAATCGCGCTCAGGTgcca < 1:459557/250‑1 (MQ=255) gcgcATCACCCTGTTCCTCCCCCCCCGGGGGGGGGAAGCAAAATA‑AACCGCCACACTCAGCAGTACAAACAAGGCGAATAGTGGCATCGCCAGACGGCTAAAAATTTTACATACCACGAAATAGACAATTAACGCATACAGATACCACAAGCTGGTGCTGGCGGTGATCATCCCGTGCAGGAACTCACCGGTGGAATCGGCATAAGCGGCATTGGAGGCATTGCTTAAATCGCGCTCAGGTgccagcca < 2:766622/249‑1 (MQ=255) ggATCACCCTGTTCATCCCCCACCAGGGGGTGGAAAAAAAATT‑AACCGCCACACTCAGCAGTACAAACAAGGCGAATAGTGGCAGCGCCAGACGGCTAAAAATTTTACATACCACGAAATAGACAATTAACGCATACAGATACCACAAGCTGGTGCTGGCGGTGATCATCCCGTGCAGGAACTCACCGGTGGAATCGGCATAAGCGGCATTGGAGGCATTGCTTAAATCGCGCTCAGGTGCCAGCCACTg < 2:589731/250‑1 (MQ=255) ccatgtttcttCCCCCACACGGGCTGGGAAACAAATTAAACCGCCACACTCAGCAGTACAAACAAGGCGAATAGTGGCAGCGCCAGACGGCTAAAAATTTTACATACCACGAAATAGACAATTAACGCATACAGATACCACAAGCTGGTGCTGGCGGTGATCATCCCGTGCAGGAACTCACCGGTGGAATCGGCATAAGCGGCATTGGAGGCATTGCTTAAATCGCGCTCAGGTGCCAGCCACTGGTTCa < 2:574484/241‑1 (MQ=255) ttCATTCCCCACCACGGCGTGGGAACGAAATT‑AACCGCCACACTCAGCAGTACAAACAAGGCGAATAGTGGCAGCGCCAGACGGCTAAAAATTTTACATACCACGAAATAGACAATTAACGCATACAGATACCACAAGCTGGTGCTGGCGGTGATCATCCCGTGCAGGAACTCACCGGTGGAATCGGCATAAGCGGCATTGGAGGCATTGCTTAAATCGCGCTCAGGTGCCAGCCACTGGTTCAGCGCAc > 1:893057/1‑250 (MQ=255) ttCATCCCCCACCGCGGCGGGGGAACAAAATT‑AACCGCCACACTCAGCAGTACAAACAAGGCGAATAGTGGCAGCGCCAGACGGCTAAAAATTTTACATACCACGAAATAGACAATTAACGCATACAGATACCACAAGCTGGTGCTGGCGGTGATCATCCCGTGCAGGAACTCACCGGTGGAATCGGCATAAGCGGCATTGGAGGCATTGCTTAAATCGCGCTCAGGTGCCAGCCACTGGTTCAGCGCa < 1:937705/249‑1 (MQ=255) ccccACCACGGCGTGGGAACGAAATT‑AACCGCCACACTCAGCAGTACAAACAAGGCGAATAGTGGCAGCGCCAGACGGCTAAAAATTTTACATACCACGAAATAGACAATTAACGCATACAGATACCACAAGCTGGTGCTGGCGGTGAACATCCCGTGCAGGAACTCACCGGTGGAATCGGCATAAGCGGCATTGGCGGCATTGCTTAAATCGCGCTCAGGTGCCAGCCACTGGGTCAGCGCACTTAACg > 1:108097/1‑250 (MQ=255) ccccacGGCGTGGAAACAAAATT‑AACCGCCACACTCAGCAGTACAAACAAGGCGAATAGTGGCAGCGCCAGACGGCTAAAAATTTTACATACCACGAAATAGACAATTAACGCATACAGATACCACAAGCTGGTGCTGGCGGTGATCATCCCGTGCAGGAACTCACCGGTGGAATCGGCATAAGCGGCATTGGAGGCATTGCTTAAATCGCGCTCAGGTGCCAGCCACTGGTTCAGCGCACTTAACgcca < 1:909665/248‑1 (MQ=255) gTGGGAACGAAATT‑AACCGCCACACTCAGCAGTACAAACAAGGCGAATAGTGGCAGCGCCAGACGGCTAAAAATTTTACATACCACGAAATAGACAATTAACGCATACAGATACCACAAGCTGGTGCTGGCGGTGATCATCCCGTGCAGGAACACACCCGTGGAATCGGCATAAGCGGCACTGGAGGCATTGCTTAAATCGCGCTCAGGGGCCAGCCCCTGGTTCAGCGACCTTAACGCCCACCACTgtc > 2:902699/1‑248 (MQ=255) aCGAAATT‑AACCGCCACACTCAGCAGTACAAACAAGGCGAATAGTGGCAGCGCCAGACGGCTAAAAATTTTACATACCACGAAATAGACAATTAACGCATACAGATACCACAAGCTGGTGCTGGCGGTGATCATCCCGTGCAGGAACTCACCGGGGGAATCGGCATAAGCGGCATTTGAGGCATTGCTTAAATCGCGCTCAGGTGCCAGCCACTGGTTCAGCGCACTTAACGCCAGCCACTGCACCACGc > 1:699354/1‑250 (MQ=255) cGAAATT‑AACCGCCACACTCAGCAGTACAAACAAGGCGAATAGTGGCAGCGCCAGACGGCTAAAAATTTTACATACCACGAAATAGACAATTAACGCATACAGATACCACAAGCTGGTGCTGGCGGTGATCATCCCGTGCAGGAACTCACCGGTGGAATCGGCATAAGCGGCATTGGAGGCATTGCTTAAATCGCGCTCAGGTGCCAGCCACTGGTTCAGCGCACTTAACGCCAGCCACTGCACCACGcc > 1:503804/1‑250 (MQ=255) | CCGAATCGTTGCTCGTATTGATAAAACAGCTTCATGATCACCACAATCGATACCAGCGACAACAGCAGCGAGATAGTAAACAACCAGGCACCGACCGCCAGAACGGT‑AAGCAAAGAAGCCATCAGCAGATGGCGGCGCAACGGC‑ACCTCTTTAACACAGGTCATTATTGTTGCGCCAAACCATGCGCCAAGGCTGTAATAAGGCAAATTGCGGATCACACTGTTCATTCCCCACCACGGCGTGGGAACGAAATT‑AACCGCCACACTCAGCAGTACAAACAAGGCGAATAGTGGCAGCGCCAGACGGCTAAAAATTTTACATACCACGAAATAGACAATTAACGCATACAGATACCACAAGCTGGTGCTGGCGGTGATCATCCCGTGCAGGAACTCACCGGTGGAATCGGCATAAGCGGCATTGGAGGCATTGCTTAAATCGCGCTCAGGTGCCAGCCACTGGTTCAGCGCACTTAACGCCAGCCACTGCACCACGCC > NZ_CP009273/1169834‑1170330 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |