| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | CP043523 | 1,883,134 | +A | intergenic (+15/‑146) | FTN78_chr1927 → / → FTN78_chr1928 | 3‑ketoacyl‑CoA thiolase, Acetyl‑CoA acetyltransferase/Transposase TnpA |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | CP043523 | 1,883,134 | 1 | . | A | 99.8% | 1681.8 / ‑3.0 | 501 | intergenic (+15/‑146) | FTN78_chr1927/FTN78_chr1928 | 3‑ketoacyl‑CoA thiolase, Acetyl‑CoA acetyltransferase/Transposase TnpA |
| Reads supporting (aligned to +/- strand): ref base . (0/1); new base A (246/254); total (246/255) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.87e-01 | |||||||||||
Only 100 of 527 total aligned reads displayed.
CAAGTGCGTCTTGAAGATAATACGGTGTTGACTGCTAAACAGATTCAAGAATTACAAAAAAGGAATGCCCAACTAGAGGAAGAAAATCTGATCTTAAAAAAAGCGAGTGCCATATTCATGCAAAACTCCAAGTAAGATTGAAAGCCATC‑T‑TAGACTCCGATTTGAACACACGACAGTCATGCTCTGTCGTGTTTTACATGTCAATCGTTCCATCAACTATAACTTTATAAACAAGAGGCCTTCGAAGCGTGAAGTAAAAAATCAACGCTTGTGAAAACACCTCCTTGAGATTT > CP043523/1882985‑1883277 | cAAGTGCGTCTTGAAGATAATACGGTGTTGACTGCTAAACAGATTCAAGAATTACAAAAAAGGAGTGCCCAACTAGAGGAAGAAAATCTGATCTTAAAAAAAGCGAGTGCCATATTCATGCAAAACTCCAAGTAAGATTGAAAGCCATC‑t > 1:1826905/1‑150 (MQ=255) aaGTGCGTCTTGAAGATAATACGGTGTTGACTGCTAAACAGATTCAAGAATTACAAAAAAGGAGTGCCCAACTAGAGGAAGAAAATCTGATCTTAAAAAAAGCGAGTGCCATATTCATGCAAAACTCCAAGTAAGATTGAAAGCCATC‑ta > 1:2182528/1‑149 (MQ=255) gTGCGTCTTGAAGATAATACGGTGTTGACTGCTAAACAGATTCAAGAATTACAAAAAAGGAGTGCCCAACTAGAGGAAGAAAATCTGATCTTAAAAAAAGCGAGTGCCATATTCATGCAAAACTCCAAGTAAGATTGAAAGCCATC‑tata < 1:874406/150‑4 (MQ=255) cGTCTTGAAGATAATACGGTGTTGACTGCTAAACAGATTCAAGAATTACAAAAAAGGAGTGCCCAACTAGAGGAAGAAAATCTGATCTTAAAAAAAGCGAGTGCCATATTCATGCAAAACTCCAAGTAAGATTGAAAGCCATC‑TATAGAc > 2:2014811/1‑150 (MQ=255) cTTGAAGATAATACGGTGTTGACTGCTAAACAGATTCAAGAATTACAAAAAAGGAGTGCCCAACTAGAGGAAGAAAATCTGATCTTAAAAAAAGCGAGTGCCATATTCATGCAAAACTCCAAGTAAGATTGAAAGCCATC‑TATAGACTcc < 1:1586738/150‑1 (MQ=255) aGATAATACGGTGTTGACTGCTAAACAGATTCAAGAATTACAAAAAAGGAGTGCCCAACTAGAGGAAGAAAATCTGATCTTAAAAAAAGCGAGTGCCATATTCATGCAAAACTCCAAGTAAGATTGAAAGCCATC‑TATAGACTCCGAttt > 1:2058632/1‑150 (MQ=255) aGATAATACGGTGTTGACTGCTAAACAGATTCAAGAATTACAAAAAAGGAGTGCCCAACTAGAGGAAGAAAATCTGATCTTAAAAAAAGCGAGTGCCATATTCATGCAAAACTCCAAGTAAGATTCAAAGCCATC‑TATAGCCTCCGAttt < 2:3836968/150‑1 (MQ=255) gATAATACGGTGTTGACTGCTAAACAGATTCAAGAATTACAAAAAAGGAGTGCCCAACTAGAGGAAGAAAATCTGATCTTAAAAAAAGCGAGTGCCATATTCATGCAAAACTCCAAGTAAGATTGAAAGCCATC‑TATAGACTCCGATTTg > 1:2567115/1‑150 (MQ=255) gATAATACGGTGTTGACTGCTAAACAGATTCAAGAATTACAAAAAAGGAGTGCCCAACTAGAGGAAGAAAATCTGATCTTAAAAAAAGCGAGTGCCATATTCATGCAAAACTCCAAGTAAGATTGAAAGCCATC‑TATAGACTCCGATTTg > 2:557600/1‑150 (MQ=255) ataataCGGTGTTGGCTGCTAAACAGATTCAAGAATTACAAAAAAGGAGTGCCCAACTAGAGGAAGAAAATCTGATCTTAAAAAAAGCGAGTGCCATATTCATGCAAAACTCCAAGTAAGATTGAAAGCCATC‑TATAGACTCCGATTTGa > 1:3157013/1‑150 (MQ=255) ataataCGGTGTTGACTGCTAAACAGATTCAAGAATTACAAAAAAGGAGTGCCCAACTAGAGGAAGAAAATCTGATCTTAAAAAAAGCGAGTGCCATATTCATGCAAAACTCCAAGTAAGATTGAAAGCCATC‑TATAGACTCCGATTTGa > 1:3455940/1‑150 (MQ=255) taCGGTGTTGACTGCTAAACAGATTCAAGAATTACAAAAAAGGAGTGCCCAACTAGAGGAAGAAAATCTGATCTTAAAAAAAGCGAGTGCCACATTCATGCAAAACTCCAAGTAAGATTGAAAGCCATC‑TATAGACTCCGATTTGAacac < 2:3895116/150‑1 (MQ=255) gtTGACTGCTAAACAGATTCAAGAATTACAAAAAAGGAGTGCCCAACTAGAGGAAGAAAATCTGATCTTAAAAAAAGCGAGTGCCATATTCATGCAAAACTCCAAGTAAGATTGAAAGCCATC‑TATAGACTCCGATTTGAACACACGACa < 2:2655314/150‑1 (MQ=255) gtTGACTGCTAAACAGATTCAAGAATTACAAAAAAGGAGTGCCCAACTAGAGGAAGAAAATCTGATCTTAAAAAAAGCGAGTGCCATATTCATGCAAAACTCCAAGTAAGATTGAAAGCCATC‑TATAGACTCCGATTTGAACACACGACa > 1:2749418/1‑150 (MQ=255) tGACTGCTAAACAGATTCAAGAATTACAAAAAAGGAGTGCCCAACTAGAGGAAGAAAATCTGATCTTAAAAAAAGCGAGTGCCATATTCATGCAAAACTCCAAGTAAGATTGAAAGCCATC‑TATAGACTCCGATTTGAACACACGACAGt > 1:4230030/1‑150 (MQ=255) aCTGCTAAACAGATTCAAGAATTAAAAAAAAGGAGTGCCCAACTAGAGGAAGAAAATCTGATCTTAAAAAAAGCGAGTGCCATATTCATGCAAAACTCCAAGTAAGATTGAAAGCCATC‑TATAGACTCCGATTTGAACACACGACAGtta < 2:322012/150‑3 (MQ=255) tAAACAGATTCAAGAATTACAAAAAAGGAGTGCCCAACTAGAGGAAGAAAATCTGATCTTAAAAAAAGCGAGTGCCATATTCATGCAAAACTCCAAGTAAGATTGAAAGCCATC‑TATAGACTCCGATTTGAACACACGACAGTTATGctc > 1:511434/1‑150 (MQ=255) tAAACAGATTCAAGAATTACAAAAAAGGAGTGCCCAACTAGAGGAAGAAAATCTGATCTTAAAAAAAGCGAGTGCCATATTCATGCAAAACTCCAAGTAAGATTGAAAGCCATC‑TATAGACTCCGATTTGAACACACGACAGTTATGctc < 1:2997762/150‑1 (MQ=255) aaaCAGATTCCAGAATTACAAAAAAGGAGTGCCCAACTAGAGGAAGAAGATCTGATCTTAAAGAAAGCGAATGCCATATCCATGCAAAACTCCAAGTAAGATTGAAAGCCATC‑TATAGTCTCCGATTTGAACACACGACAGGTATGctct > 2:4364079/1‑150 (MQ=255) aaaCAGATTCAAGAATTACAAAAAAGGAGTGCCCAACTAGAGGAAGAAAATCTGATCTTAAAAAAAGCGAGTGCCATATTCATGCAAAACTCCAAGTAAGATTGAAAGCCATC‑TATAGACTCCGATTTGAACACACGACAGTTATGctct > 1:2132443/1‑150 (MQ=255) naCAGATTCAAGAATTACAAAAAAGGAGTGCCCAACTAGAGGAAGAAAATCTGATCTTAAAAAAAGCGAGTGCCATATTCATGCAAAACTCCAAGTAAGATTGAAAGCCATC‑TATAGACTCCGATTTGAACACACGAGAGTTATGCTCTg > 2:3508756/2‑150 (MQ=255) aaCAGATTCAAGAATTACAAAAAAGGAGTGCCCAACTAGAGGAAGAAAATCTGATCTTAAAAAAAGCGAGTGCCATATTCATGCAAAACTCCAAGTAAGATTGAAAGCCATC‑TATAGACTCCGATTTGAACACACGACAGTTATGCTCTg < 1:1712738/150‑1 (MQ=255) aCAGATTCAAGAATTACAAAAAAGGAGTGCCCAACTAGAGGAAGAAAATCTGATCTTAAAAAAAGCGAGTGCCATATTCATGCAAAACTCCAAGTAAGATTGAAAGCCATC‑TATAGACTCCGATTTGAACACACGACAGTTATGCTCTGt < 1:2639103/150‑1 (MQ=255) cAAGAATTACAAAAAAGGAGTGCCCAACTAGAGGAAGAAAATCTGATCTTAAGAAAAGCGAGTGCCATATTCATGCAAAACTCCAAGTAAGATTGAAAGCCATC‑TATAGACTCCGATTTGAACACACGACAGTTATGCTCTGTCGTGttt > 2:4190397/1‑150 (MQ=255) cAAGAATTACAAAAAAGGAGTGCCCAACTAGAGGAAGAAAATCTGATCTTAAAAAAAGCGAGTGCCATATTCATGCAAAACTCCAAGTAAGATTGAAAGCCATC‑TATAGACTCCGATTTGAACACACGACAGTTATGCTCTGTCGTGttt < 1:655381/150‑1 (MQ=255) cAAGAATTACAAAAAAGGAGTGCCCAACTAGAGGAAGAAAATCTGATCTTAAAAAAAGCGAGTGCCATATTCATGCAAAACTCCAAGTAAGATTGAAAGCCATC‑TATAGACTCCGATTTGAACACACGACAGTTATGCTCTGTCGTGttt > 1:3239488/1‑150 (MQ=255) aaTTACAAAAAAGGAGTGCCCAACTAGAGGAAGAAAATCTGATCTTAAAAAAAGCGAGTGCCATATTCATGCAAAACTCCAAGTAAGATTGAAAGCCATC‑TATAGACTCCGATTTGAACACACGACAGTTATGCTCTGTCGTGTTTTACa > 2:675378/1‑150 (MQ=255) aaTTACAAAAAAGGAGTGCCCAACTAGAGGAAGAAAATCTGATCTTAAAAAAAGCGAGTGCCATATTCATGCAAAACTCCAAGTAAGATTGAAAGCCATC‑TATAGACTCCGATTTGAACACACGACAGTTATGCTCTGTCGTGTTTTACa < 2:1648848/150‑1 (MQ=255) actACAAAAAAGGAGTGCCCAACTAGAGGAAGAAAATCTGATCTTAACAAAAGCGAGTGCCATATTCATGCAAAACTCCAAGTAAGATTGAAAGCCATC‑TATAGACTCCGATTTGAACACACGACAGTTATGCTCTGTCGTGTTTTACAt < 2:274908/148‑1 (MQ=255) aTTACAAAAAAGGAGTGCCCAACTAGAGGAAGAAAATCTGATCTTAAAAAAAGCGAGTGCCATATTCATGCAAAACTCCAAGTAAGATTGAAAGCCATC‑TATAGACTCCGATTTGAACACACGACAGTTATGCTCTGTCGTGTTTTACAt < 2:819200/150‑1 (MQ=255) aTTACAAAAAAGGAGTGCCCAACTAGAGGAAGAAAATCTGATCTTAAAAAAAGCGAGTGCCATATTCATGCAAAACTCCAAGTAAGATTGAAAGCCATC‑TATAGACTCCGATTTGAACACACGACAGTTATGCTCTGTCGTGTTTTACAt > 2:1549893/1‑150 (MQ=255) aTTACAAAAAAGGAGTGCCCAACTAGAGGAAGAAAATCTGATCTTAAAAAAAGCGAGTGCCATATTCATGCAAAACTCCAAGTAAGATTGAAAGCCATC‑TATAGACTCCGATTTGAACACACGACAGTTATGCTCTGTCGTGTTTTACAt > 1:3577033/1‑150 (MQ=255) ttACAAAAAAGGAGTGCCCAACTAGAGGAAGAAAATCTGATCTTAAAAAAAGCGAGTGCCATATTCATGCAAAACTCCAAGTAAGATTGAAAGCCATC‑TATAGACTCCGATTTGAACACACGACAGTTATGCTCTGTCGTGTTTTACATg < 1:4003111/150‑1 (MQ=255) ttACAAAAAAGGAGTGCCCAACTAGAGGAAGAAAATCTGATCTTAAAAAAAGCGAGTGCCATATTCATGCAAAACTCCAAGTAAGATTGAAAGCCATC‑TATAGACTCCGATTTGAACACACGACAGTTATGCTCTGTCGTGTTTTACATg > 2:1746202/1‑150 (MQ=255) aaaaaaGGAGTGCCCAACTAGAGGAAGAAAATCTGATCTTAAAAAAAGCGAGTGCCATATTCATGCAAAACTCCAAGTAAGATTGAAAGCCATC‑TATAGACTCCGATTTGAACACACGACAGTTATGCTCTGTCGTGTTTTACATGTCaa > 1:2492523/1‑150 (MQ=255) aGGAGTGCCTAACTAGAGGAAGAAAATCTGATCTTAAAAAAAGCGAGTGCCATATTCATGCAAAACTCCAAGTAAGATTGAAAGCCATC‑TATAGACTCCGATTTGAACACACGACAGTTATGCTCTGTCGTGTTTTACATGTCAATCGtt < 1:2920643/150‑1 (MQ=255) ggAGTGCCCAACTAGAGGAAGAAAATCTGATCTTAAAAAAAGCGAGTGCCATATTCATGCAAAACTCCAAGTAAGATTGAAAGCCATC‑TATAGACTCCGATTTGAACACACGACAGTTATGCTCTGTCGTGTTTTACATGTCAATCGTTc < 1:2964598/150‑1 (MQ=255) ggAGTGCACAACTAGAGGAAGAAAATTTGATCTTAAAAAAAGCGAGTGCCATATTAATGCAAAACTCCAAGTAAGATTGAAAGCTATT‑TATAGACTGCGATTTGAACACAGGACAGTTATGCTATGTCGTGTTTTACATGTAAATAGtta > 1:2018340/1‑149 (MQ=255) tGCCCAACTAGAGGAAGAAAATCTGATCTTAAAAAAAGCGAGTGCCATATTCATGCAAAACTCCAAGTAAGATTGAAAGCCATC‑TATAGACTCCGATTTGAACACACGACAGTTATGCTCTGTCGTGTTTTACATGTCAATCGTTCCacc < 1:4519355/150‑3 (MQ=255) tGCCCAACTAGAGGAAGAAAATCTGATCTTAAAAAAAGCGAGTGCCATATTCATGCAAAACTCCAAGTAAGATTGAAAGCCATC‑TATAGACTCCGATTTGAACACACGACAGTTATGCTCTGTCGTGTTTTACATGTCAATCGTTCCacc > 1:1148408/1‑148 (MQ=255) gCCCAACTAGAGGAAGAAAATCTGATCTTAAAAAAAGCGAGTGCCATATTCATGCAAAACTCCAAGTAAGATTGAAAGCCATC‑TATAGACTCCGATTTGAACACACGACAGTTATGCTCTGTCGTGTTTTACATGTCAATCGTTCCacct < 2:2208500/150‑4 (MQ=255) gCCCAACTAGAGGAAGAAAATCTGATCTTAAAAAAAGCGAGTGCCATATTCATGCAAAACTCCAAGTAAGATTGAAAGCCATC‑TATAGACTCCGATTTGAACACACGACAGTTATGCTCTGTCGTGTTTTACATGTCAATCGTTCCacct > 2:3397801/1‑147 (MQ=255) gCCCAACTAGAGGAAGAAAATCTGATCTTAAAAAAAGCGAGTGCCATATTCATGCAAAACTCCAAGTAAGATTGAAAGCCATC‑TATAGACTCCGATTTGAACACACGACAGTTATGCTCTGTCGTGTTTTACATGTCAATCGTTCCacct < 1:746487/150‑4 (MQ=255) ccAACTAGAGCAAGAAAATCGGATCTTAAAAAAAGCGAGTGCCGTATTCATGCAAAACTCCAAGTAAGATTGAAAGCCATC‑TATAGACTCCGATTTGAACACACGACAGTTATGCTCTGTCGTGTTTTACATGTCAATCGTTCCacctac < 1:4378690/150‑6 (MQ=255) cAACTAGAGGAAGAAAATCTGATCTTAAAAAAAGCGAGTGCCATATTCATGCAAAACTCCAAGTAAGATTGAAAGCCATC‑TATAGACTCCGATTTGAACACACGACAGTTATGCTCTGTCGTGTTTTACATGTCAATCGTTCCacctact < 2:2842548/150‑7 (MQ=255) tAGAGGAAGAAAATCTGATCTTAAAAAAAGCGAGTGCCATATTCATGCAAAACTCCAAGTAAGATTGAAAGCCATC‑TATAGACTCCGATTTGAACACACGACAGTTATGCTCTGTCGTGTTTTACATGTCAATCGTTCCACCTACTGTaa < 2:788124/150‑1 (MQ=255) agagGAAGAAAATCTGATCTTAAAAAAAGCGAGTGCCATATTCATGCAAAACTCCAAGTAAGATTGAAAGCCATC‑TATAGACTCCGATTTGAACACACGACAGTTATGCTCTGTCGTGTTTTACATGTCAATCGTTCCACCTACTGTAAc < 1:780222/150‑1 (MQ=255) gagGAAGAAAATCTGATCTTAAAAAAAGCGAGTGCCATATTCATGCAAAACTCCAAGTAAGATTGAAAGCCATC‑TATAGACTCCGATTTGAACACACGACAGTTATGCTCTGTCGTGTTTTACATGTCAATCGTTCCACCTACTGTAACt > 2:1406528/1‑150 (MQ=255) ggAAGAAAATCTGATCTTAAAAAAAGCGAGTGCCATATTCATGCAAAACTCCAAGTAAGATTGAAAGCCATC‑TATAGACTCCGATTTGAACACACGACAGTTATGCTCTGTCGTGTTTTACATGTCAATCGTTCCACCTACTGTAACttc < 1:2258088/150‑2 (MQ=255) ggAAGAAAATCTGATCTTAAAAAAAGCGAGTGCCATATTCATGCAAAACTCCAAGTAAGATTGAAAGCCATC‑TATAGACTCCGATTTGAACACACGACAGTTATGCTCTGTCGTGTTTTACATGTCAATCGTTCCACCTACTGTAACttc > 2:1846059/1‑149 (MQ=255) gaagaaAATCTGATCTTAAAAAAAGCGAGTGCCATATTCATGCAAAACTCCAAGTAAGATTGAAAGCCATC‑TATAGACTCCGATTTGAACACACGACAGTTATGCTCAGTCGTGTTTTACATGTCAATCGTTCCACCTACTGTAACttca < 2:3741077/150‑3 (MQ=255) aaaaTCTGATCTTAAAAAAAGCGAGTGCCATATTCATGCAAAACTCCAAGTAAGATTGAAAGCCATC‑TATAGACTCCGATTTGAACACACGACAGTTATGCTCTGTCGTGTTTTACATGTCAATCGTTCCACCTACTGTAACTTCATaaa > 2:4049777/1‑150 (MQ=255) aaaTCTGATCTTAAAAAAAGCGAGTGCCATATTCATGCAAAACTCCAAGTAAGATTGAAAGCCATC‑TATAGACTCCGATTTGAACACACGACAGTTATGCTCTGTCGTGTTTTACATGTCAATCGTTCCACCTACTGTAACTTCATAAAc < 1:1193518/150‑1 (MQ=255) aaTCTGATCTTAAAAAAAGCGAGTGCCATATTCATGCAAAACTCCAAGTAAGATTGAAAGCCATC‑TATAGACTCCGATTTGAACACACGACAGTTATGCTCTGTCGTGTTTTACATGTCAATCGTTCCACCTACTGTAACTTCATAAACa > 1:98244/1‑150 (MQ=255) aaTCTGATCTTAAAAAAAGCGAGTGCCATATTCATGCAAAACTCCAAGTAAGATTGAAAGCCATC‑TATAGACTCCGATTTGAACACACGACAGTTATGCTCTGTCGTGTTTTACATGTCAATCGTTCCACCTACTGTAACTTCATAAACa > 1:100567/1‑150 (MQ=255) cTGATCTTAAAAAAAGCGAGTGCCATATTCATGCAAAACTCCAAGTAAGATTGAAAGCCATC‑TATAGACTCCGATTTGAACACACGACAGTTATGCTCTGTCGTGTTTTACATGTCAATCGTTCCACCTACTGTAACTTCATAAACAaga > 1:1916333/1‑150 (MQ=255) cTGATCTTAAAAAAAGCGAGTGCCATATTCATGCAAAACTCCAAGTAAGATTGAAAGCCATC‑TATAGACTCCGATTTGAACACACGACAGTTATGCTCTGTCGTGTTTTACATGTCAATCGTTCCACCTACTGTAACTTCATAAACAaga > 1:3525040/1‑150 (MQ=255) tCTTAAAAAAAGCGAGTGCCATATTCATGCAAAACTCCAAGTAAGATTGAAAGCCATC‑TATAGACTCCGATTTGAACACACGACAGTTATGCTCTGTCGTGTTTTACATGTCAATCGTTCCACCTACTGTAACTTCATAAACAAGAGGcc < 2:1476494/150‑1 (MQ=255) tCTTAAAAAAAGCGAGTGCCATATTCATGCAAAACTCCAAGTAAGATTGAAAGCCATC‑TATAGACTCCGATTTGAACACACGACAGTTATGCTCTGTCGTGTTTTACATGTCAATCGTTCCACCTACTGTAACTTCATAAACAAGAGGcc < 2:3092363/150‑1 (MQ=255) cTTAAAAAAAGCGAGTGCCATATTCATGCAAAACTCCAAGTAAGATTGAAAGCCATC‑TATAGACTCCGATTTGAACACACGACAGTTATGCTCTGTCGTGTTTTACATGTCAATCGTTCCACCTACTGTAACTTCATAAACAAGAGGCCt > 2:4074554/1‑150 (MQ=255) cTTAAAAAAAGCGAGTGCCATATTCATGCAAAACTCCAAGTAAGATTGAAAGCCATC‑TATAGACTCCGATTTGAACACACGACAGTTATGCTCTGTCGTGTTTTACATGTCAATCGTTCCACCTACTGTAACTTCATAAACAAGAGGCCt < 2:4267621/150‑1 (MQ=255) aaaaaaaGCGAGTGCCATATTCATGCAAAACTCCAAGTAAGATTGAAAGCCATC‑TATAGACTCCGATTTGAACACACGACAGTTATGCTCTGTCGTGTTTTACATGTCAATCGTTCCACCTACTGTAACTTCATAAACAAGAGGCCTTCg < 1:3359932/150‑1 (MQ=255) aaaaaaaGCGAGTGCCATATTCATGCAAAACTCCAAGTAAGATTGAAAGCCATC‑TATAGACTCCGATTTGAACACACGACAGTTATGCTCTGTCGTGTTTTACATGTCAATCGTTCCACCTACTGTAACTTCATAAACAAGAGGCCTTCg > 2:3020942/1‑150 (MQ=255) aaaaaaGCGAGTGCCATATTCATGCAAAACTCCAAGTAAGATTGAAAGCCATC‑TATAGACTCCGATTTGAACACACGACAGTTATGCTCTGTCGTGTTTTACATGTCAATCGTTCCACCTACTGTAACTTCATAAACAAGAGGCCTTCGa > 1:4157026/1‑150 (MQ=255) aaaaaGCGAGTGCCATATTCATGCAAAACTCCAAGTAAGATTGAAAGCCATC‑TATAGACTCCGATTTGAACACACGACAGTTATGCTCTGTCGTGTTTTACATGTCAATCGTTCCACCTACTGTAACTTCATAAACAAGAGGCCTTCGaa > 2:1299600/1‑150 (MQ=255) aaaaGCGAGTGCCATATTCATGCAAAACTCCAAGTAAGATTGAAAGCCATC‑TATAGACTCCGATTTGAACACACGACAGTTATGCTCTGTCGTGTTTTACATGTCAATCGTTCCACCTACTGTAACTTCATAAACAAGAGGCCTTCGAAg < 2:2347298/150‑1 (MQ=255) aaaaGCGAGTGCCATATTCATGCAAAACTCCAAGTAAGATTGAAAGCCATC‑TATAGACTCCGATTTGAACACACGACAGTTATGCTCTGTCGTGTTTTACATGTCAATCGTGCCACCTACTGTGACTTCATAAACAAGAGGCCTTCGAAg > 1:3909832/1‑150 (MQ=255) aaaGCGAGTGCCATATTCATGCAAAACTCCAAGTAAGATTGAAAGCCATC‑TATAGACTCCGATTTGAACACACGACAGTTATGCTCTGTCGTGTTTTACATGTCAATCGTTCCACCTACTGTAACTTCATAAACAAGAGGCCTTCGAAGc > 1:3049501/1‑150 (MQ=255) aaaGCGAGTGCCATATTCATGCAAAACTCCAAGTAAGATTGAAAGCCATC‑TATAGACTCCGATTTGAACACACGACAGTTATGCTCTGTCGTGTTTTACATGTCAATCGTTCCACCTACTGTAACTTCATAAACAAGAGGCCTTCGAAGc > 1:2429075/1‑150 (MQ=255) aaaGCGAGTGCCATATTCATGCAAAACTCCAAGTAAGATTGAAAGCCATC‑TATAGACTCCGATTTGAACACACGACAGTTATGCTCTGTCGTGTTTTACATGTCAATCGTTCCACCTACTGTAACTTCATAAACAAGAGGCCTTCGAAGc < 2:2080067/150‑1 (MQ=255) aaGCGAGTGCCATATTCATGCAAAACTCCAAGTAAGATTGAAAGCCATC‑TATAGACTCCGATTTGAACACACGACAGTTATGCTCTGTCGTGTTTTACATGTCAATCGTTCCACCTACTGTAACTTCATAAACAAGAGGCCTTCGAAGCg < 2:4334346/150‑1 (MQ=255) aGTGCCATATTCATGCAAAACTCCAAGTAAGATTGAAAGCCATC‑TATAGACTCCGATTTGAACACACGACAGTTATGCTCTGTCGTGTTTTACATGTCAATCGTTCCACCTACTGTAACTTCATAAACAAGAGGCCTTCGAAGCGTGAAg > 2:1931809/1‑150 (MQ=255) gTGCCATATTCATAAAAAACTCCAAATAACATTAAAATCCATC‑TATAGACTCCTATTTTAACACACGACAGTTATTCTCTGTCGTGTTTTACATGTCAATCGTTCCACCTACTGTAACTTCATAAACAAGAGGCCTTCGAAGCGTGAAGt < 2:1513534/150‑1 (MQ=255) ccATATTCATGCAAAACTCCAAGTAAGATGGAAAGCCATC‑TATAGACTCCGATTTGAACACACGACAGTTATGCTCTGTCGTGTTTTACATGTCAATCGTTCCACCTACTGTAACTTCATAAACAAGAGGCCTTCGAAGCGTGAAGTaga < 2:3972849/150‑3 (MQ=255) ttCATGCAAAACTCCAAGTAAGATTGAAAGCCATC‑TATAGACTCCGATTTGAACACACGACAGTTATGCTCTGTCGTGTTTTACATGTCAATCGTTCCACCTACTGTAACTTCATAAACAAGAGGCCTTCGAAGCGTGAAGTAGAAAATc < 2:2242185/150‑1 (MQ=255) cATGCAAAACTCCAAGTAAGATTGAAAGCCCTC‑TATAGACTCCGATTTGAACACACGACAGTTATGCTCTGTCGTGTTTTACATGTCAATCGTTCCACCTACTGTAACTTCATAAACAAGAGGCCTTCGAAGCGTGAAGTAGAAAATCaa > 2:2450445/1‑150 (MQ=255) aTGCAAAACTCCAAGTAAGATTGAAAGCCATC‑TATAGACTCCGATTTGAACACACGACAGTTATGCTCTGTCGTGTTTTACATGTCAATCGTTCCACCTACTGTAACTTCATAAACAAGAGGCCTTCGAAGCGTGAAGTAGAAAATCAAc > 2:544464/1‑150 (MQ=255) aTGCAAAACTCCAAGTAAGATTGAAAGCCATC‑TATAGACTCCGATTTGAACACACGACAGTTATGCTCTGTCGTGTTTTACATGTCAATCGTTCCACCTACTGTAACTTCATAAACAAGAGGCCTTCGAAGCGTGAAGTAGAAAATCAAc < 2:3555647/150‑1 (MQ=255) tGCAAAACTCCAAGTAAGATTGAAAGCCATC‑TATAGACTCCGATTTGAACACACGACAGTTATGCTCTGTCGTGTTTTACATGTCAATCGTTCCACCTACTGTAACTTCATAAACAAGAGGCCTTCGAAGCGTGAAGTAGAAAATCAACg < 1:2849047/150‑1 (MQ=255) gCAAAACTCCAAGTAAGATTGAAAGCCATC‑TATAGACTCCGATTTGAACACACGACAGTTATGCTCTGTCGTGTTTTACATGTCAATCGTTCCACCTACTGTAACTTCATAAACAAGAGGCCTTCGAAGCGTGAAGTAGAAAATCAACGc < 2:3671259/150‑1 (MQ=255) cAAAACTCCAAGTAAGATTGAAAGCCATC‑TATAGACTCCGATTTGAACACACGACAGTTATGCTCTGTCGTGTTTTACATGTCAATCGTTCCACCTACTGTAACTTCATAAACAAGAGGCCTTCGAAGCGTGAAGTAGAAAATCAACGCt < 2:593865/150‑1 (MQ=255) cAAAACTCCAAGTAAGATTGAAAGCCATC‑TATAGACTCCGATTTGAACACACGACAGTTATGCTCTGTCGTGTTTTACATGTCAATCGTTCCACCTACTGTAACTTCATAAACAAGAGGCCTTCGAAGCGTGAAGTAGAAAATCAACGCt < 2:1826473/150‑1 (MQ=255) aaaCTCCAAGTAAGATTGAAAGCCATC‑TATAGACTCCGATTTGAACACACGACAGTTATGCTCTGTCGTGTTTTACATGTCAATCGTTCCACCTACTGTAACTTCATAAACAAGAGGCCTTCGAAGCGTGAAGTAGAAAATCAACGCTtg > 2:2921147/1‑150 (MQ=255) aaCTCCAAGTAAGATTGAAAGCCATC‑TATAGACTCCGATTTGAACACACGACAGTTATGCTCTGTCGTGTTTTACATGTCAATCGTTCCACCTACTGTAACTTCATAAACAAGAGGCCTTCGAAGCGTGAAGTAGAAAATCAACGCTtga > 2:2577709/1‑149 (MQ=255) tCCAAGTAAGATTGAAAGCCATC‑TATAGACTCCGATTTGAACACACGACAGTTATGCTCTGTCGTGTTTTACATGTCAATCGTTCCACCTACTGTAACTTCATAAACAAGAGGCCTTCGAAGCGTGAAGTAGAAAATCAACGCTTGAGaa > 2:488540/1‑150 (MQ=255) ccAAGTAAGATTGAAAGCCATC‑TATAGACTCCGATTTGAACACACGACAGTTATGCTCTGTCGTGTTTTACATGTCAATCGTTCCACCTACTGTAACTTCATAAACAAGAGGCCTTCGAAGCGTGAAGTAGAAAATCAACGCTTGAGaaa > 2:3315182/1‑150 (MQ=255) cAAGTAAGATTGAAAGCCATC‑TATAGACTCCGATTTGAACACACGACAGTTATGCTCTGTCGTGTTTTACATGTCAATCGTTCCACCTACTGTAACTTCATAAACAAGAGGCCTTCGAAGCGTGAAGTAGAAAATCAACGCTTGAGaaaa < 1:1508065/150‑1 (MQ=255) aGTAAGATTGAAAGCCATC‑TATAGACTCCGATTTGAACACACGACAGTTATGCTCTGTCGTGTTTTACATGTCAATCGTTCCACCTACTGTAACTTCATAAACAAGAGGCCTTCGAAGCGTGAAGTAGAAAATCAACGCTTGAGaaaatt < 1:3691220/150‑3 (MQ=255) tAAGATTGAAAGCCATC‑TATAGACTCCGATTTGAACACACGACAGTTATGCTCTGTCGTGTTTTACATGTCAATCGTTCCACCTACTGTAACTTCATAAACAAGAGGCCTTCGAAGCGTGAAGTAGAAAATCAACGCTTGAGaaaattac < 1:1362862/150‑5 (MQ=255) tAAGATTGAAAGCCATC‑TATAGACTCCGATTTGAACACACGACAGTTATGCTCTGTCGTGTTTTACATGTCAATCGTTCCACCTACTGTAACTTCATAAACAAGAGGCCTTCGAAGCGTGAAGTAGAAAATCAACGCTTGAGaaaattac < 2:2513284/150‑5 (MQ=255) aGATTGAAAGCCATC‑TATAGACTCCGATTTGAACACACGACAGTTATGCTCTGTCGTGTTTTACATGTCAATCGTTCCACCTACTGTAACTTCATAAACAAGAGGCCTTCGAAGCGTGAAGTAGTAAATCAACGCTTGAGaaaattactc < 2:3776855/150‑7 (MQ=255) aGATTGAAAGCCATC‑TATAGACTCCGATTTGAACACACGACAGTTATGCTCTGTCGTGTTTTACATGTCAATCGTTCCACCTACTGTAACTTCATAAACAAGAGGCCTTCGAAGCGTGAAGTAGAAAATCAACGCTTGAGaaaattactc > 2:1172355/1‑144 (MQ=255) aGATTGAAAGCCATC‑TATAGACTCCGATTTGAACACACGACAGTTATGCTCTGTCGTGTTTTACATGTCAATCGTTCCACCTACTGTAACTTCATAAACAAGAGGCCTTCGAAGCGTGAAGTAGAAAATCAACGCTTGAGaaaattactc > 1:1789243/1‑144 (MQ=255) gATTGAAAGCCATC‑TATAGACTCCGATTTGAACACACGACAGTTATGCTCTGTCGTGTTTTACATGTCAATCGTTCCACCTACTGTAACTTCATAAACAAGAGGCCTTCGAAGCGTGAAGTAGAAAATCAACGCTTGAGaaaattactcc > 1:2348879/1‑143 (MQ=255) aaaGCCATC‑TATAGACTCCGATTTGAACACACGACAGTTATGCTCTGTCGTGTTTTACATGTCAATCGTTCCACCTACTGTAACTTCATAGACAAGAGGCCTTCGAAGCGTGAAGTAGAAAATCAACGCTTGAGAAAATTACTCCTTgag < 2:2417191/150‑1 (MQ=255) aaaGCCATC‑TATAGACTCCGATTTGAACACACGACAGTTATGCTCTGTCGTGTTTTACATGTCAATCGTTCCACCTACTGTAACTTCATAAACAAGAGGCCTTCGAAGCGTGAAGTAGAAAATCAACGCTTGAGAAAATTACTCCTTgag > 1:1438526/1‑150 (MQ=255) aaGCCATCGA‑TAGACTCCGATGTGAACACACGACAGTTATGCTCTGTCGTGTTTTACATGTCAATCGTTCCACCTACTGTAACTTCATAAACAAGAGGCCTTCGAAGCGTGAAGTAGAAAATCAACGCTTGAGAAAATTACTCCTTgaga < 1:3836486/150‑1 (MQ=255) aaGCCATC‑TATAGACTCCGATTTGAACACACGACAGTTATGCTCTGTCGTGTTTTACATGTCAATCGTTCCACCTACTGTAACTTCATAAACAAGAGGCCTTCGAAGCGTGAAGTAGAAAATCAACGCTTGAGAAAATTACTCCTTgaga < 1:1041666/150‑1 (MQ=255) gCCATC‑TATAGACTCCGATTTGAACACACGACAGTTATGCTCTGTCGTGTTTTACATGTCAATCGTTCCACCTACTGTAACTTCATAAACAAGAGGCCTTCGAAGCGTGAAGTAGAAAATCAACGCTTGAGAAAATTACTCCTTGAGAtt < 2:1112641/150‑1 (MQ=255) gCCATC‑TATAGACTCCGATTTGAACACACGACAGTTATGCTCTGTCGTGTTTTACATGTCAATCGTTCCACCTACTGTAACTTCATAAACAAGAGGCCTTCGAAGCGTGAAGTAGAAAATCAACGCTTGAGAAAATTACTCCTTGAGAtt < 1:4248459/150‑1 (MQ=255) | CAAGTGCGTCTTGAAGATAATACGGTGTTGACTGCTAAACAGATTCAAGAATTACAAAAAAGGAATGCCCAACTAGAGGAAGAAAATCTGATCTTAAAAAAAGCGAGTGCCATATTCATGCAAAACTCCAAGTAAGATTGAAAGCCATC‑T‑TAGACTCCGATTTGAACACACGACAGTCATGCTCTGTCGTGTTTTACATGTCAATCGTTCCATCAACTATAACTTTATAAACAAGAGGCCTTCGAAGCGTGAAGTAAAAAATCAACGCTTGTGAAAACACCTCCTTGAGATTT > CP043523/1882985‑1883277 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |